BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009608
(531 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 284 bits (726), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 249/459 (54%), Gaps = 21/459 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ LG+G FG C D +++A K I+K + D + REV+++K L HP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI+ L + ED S+ +IV EL GGELFD I+ R ++E AA ++K + + H+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
++HRDLKPEN L +K++ +K IDFGLS F+ + + +G+ YY+APEVL+ Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ DVWSAGVILYILL G PPF+ + E + + + F W +S++AKDL++KML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 298 NPDPKQRLTAEEVLEHPWLQN-AKKAPNVS---LGETVKARLKQFSVMNKLKKRALQVVA 353
P R+TA + LEHPW+Q + + P +S E+ ++QF KL + AL +A
Sbjct: 262 TFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMA 321
Query: 354 EFL-SVEEVAGLKEAFEMMDTNKRGKIN-----------XXXXXXXXXXXXQN---IPEA 398
L +++E L E F +DTN G ++ QN E
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIED 381
Query: 399 DLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRN 458
+ LM D+DG GS+ Y EF+A ++ + + E + +AF FD++ SG I +EL
Sbjct: 382 QIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFK 441
Query: 459 ALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 497
+ + + + +I+ VD +KDG + + EF M++
Sbjct: 442 LFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 264/512 (51%), Gaps = 34/512 (6%)
Query: 1 MGNCCARPDSSSGKRAKGKKEKPNPFYGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDL 60
+G P R++G + GD G V H + + Y
Sbjct: 8 LGGAAGEP------RSRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDR--------YKG 53
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIV 120
R LG+G FG LC D G++ A K ISK++++ D E + REVQ++K L HPNI+
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIM 112
Query: 121 SLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + +ED ++V E+ GGELFD I++R ++E AA +++ ++ + H+ ++H
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 172
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGPEVD 240
RDLKPEN L +K + + ++ IDFGLS F ++ + +G+ YY+APEVL Y + D
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCD 232
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
VWS GVILYILL G PPF E + + + + F+ W KVSE+AKDL++KML
Sbjct: 233 VWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 292
Query: 301 PKQRLTAEEVLEHPWLQNAKK---APNVSLGETVKARLKQFSVMNKLKKRALQVV-AEFL 356
P R++A + L+H W+Q K + +V + ++QF KL + AL + ++
Sbjct: 293 PSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLT 352
Query: 357 SVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQ-----------NIPEADLQILME 405
S +E L F MD N G+++ + + E ++ +++
Sbjct: 353 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 412
Query: 406 AADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALN-DEV 464
A D D +G + Y EFV V++ K + + E L +AF FD + SG I EL +V
Sbjct: 413 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 472
Query: 465 DTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 496
D+ + +++ +VD + DG + ++EF M+
Sbjct: 473 DS---ETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 264/512 (51%), Gaps = 34/512 (6%)
Query: 1 MGNCCARPDSSSGKRAKGKKEKPNPFYGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDL 60
+G P R++G + GD G V H + + Y
Sbjct: 9 LGGAAGEP------RSRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDR--------YKG 54
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIV 120
R LG+G FG LC D G++ A K ISK++++ D E + REVQ++K L HPNI+
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIM 113
Query: 121 SLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + +ED ++V E+ GGELFD I++R ++E AA +++ ++ + H+ ++H
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 173
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGPEVD 240
RDLKPEN L +K + + ++ IDFGLS F ++ + +G+ YY+APEVL Y + D
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCD 233
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
VWS GVILYILL G PPF E + + + + F+ W KVSE+AKDL++KML
Sbjct: 234 VWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 293
Query: 301 PKQRLTAEEVLEHPWLQNAKK---APNVSLGETVKARLKQFSVMNKLKKRALQVV-AEFL 356
P R++A + L+H W+Q K + +V + ++QF KL + AL + ++
Sbjct: 294 PSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLT 353
Query: 357 SVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQ-----------NIPEADLQILME 405
S +E L F MD N G+++ + + E ++ +++
Sbjct: 354 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 413
Query: 406 AADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALN-DEV 464
A D D +G + Y EFV V++ K + + E L +AF FD + SG I EL +V
Sbjct: 414 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 473
Query: 465 DTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 496
D+ + +++ +VD + DG + ++EF M+
Sbjct: 474 DS---ETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 249/455 (54%), Gaps = 20/455 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y R LG+G FG LC D G++ A K ISK++++ D E + REVQ++K L HP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI+ L + +ED ++V E+ GGELFD I++R ++E AA +++ ++ + H+
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
++HRDLKPEN L +K + + ++ IDFGLS F ++ + +G+ YY+APEVL Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 206
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ DVWS GVILYILL G PPF E + + + + F+ W KVSE+AKDL++KML
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
Query: 298 NPDPKQRLTAEEVLEHPWLQNAKK---APNVSLGETVKARLKQFSVMNKLKKRALQVV-A 353
P R++A + L+H W+Q K + +V + ++QF KL + AL + +
Sbjct: 267 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGS 326
Query: 354 EFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQ-----------NIPEADLQI 402
+ S +E L F MD N G+++ + + E ++
Sbjct: 327 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 386
Query: 403 LMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALN- 461
+++A D D +G + Y EFV V++ K + + E L +AF FD + SG I EL
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV 446
Query: 462 DEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 496
+VD+ + +++ +VD + DG + ++EF M+
Sbjct: 447 SDVDS---ETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 248/465 (53%), Gaps = 21/465 (4%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
+S Y ++LG G +G LC D G + A K I K + T + + EV ++K L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
HPNI+ L + +ED ++VME+ GGELFD I+ R ++E AA +MK ++
Sbjct: 62 D-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H+ ++HRDLKPEN L +K + +K +DFGLS F G + E +G+ YY+APEVL++
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 234 NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
Y + DVWS GVILYILLCG PPF +T+Q + + + + F W +VS+ AK LV
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 240
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGE----TVKARLKQFSVMNKLKKRAL 349
K ML +P +R++AEE L HPW+ + +G+ +K+F KL + A+
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAM 300
Query: 350 QVV-AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQ-----------NIPE 397
+ ++ ++EE L + F +D N G+++ Q + E
Sbjct: 301 LFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIE 360
Query: 398 ADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELR 457
A++ ++++ D D +G + Y EFV V + + + + E L AF FD + SG I EEL
Sbjct: 361 AEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG 420
Query: 458 NALN-DEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTD 501
EVD ++ + ++ + D + DG + +EEF MM+ D
Sbjct: 421 RLFGVTEVD---DETWHQVLQECDKNNDGEVDFEEFVEMMQKICD 462
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 253/453 (55%), Gaps = 17/453 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y ++LG G +G LC D + A K I K + T+ + + EV ++K L HP
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVLK-LLDHP 96
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI+ L D +ED ++VME +GGELFD I+ R + E AA ++K ++ V H+
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
++HRDLKPEN L +K++ + +K +DFGLS F ++ E +G+ YY+APEVL++ Y
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDE 216
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ DVWS GVIL+ILL G PPF +T+Q + + + + F W VSE AKDL+K+ML
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML 276
Query: 298 NPDPKQRLTAEEVLEHPWLQN--AKKAPNVSLGETVKA--RLKQFSVMNKLKKRALQVVA 353
D ++R++A++ LEHPW++ +KK + L A +++F KL + AL +A
Sbjct: 277 QFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMA 336
Query: 354 EFL-SVEEVAGLKEAFEMMDTNKRGK------INXXXXXXXXXXXXQNIP--EADLQILM 404
L S EE L + F +D N G+ I+ ++P E+++ ++
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 405 EAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEV 464
AAD D +G ++Y EFV V++ K + + + L AF FD++ +G I ++EL + +
Sbjct: 397 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG--L 454
Query: 465 DTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 497
D ++ +D++ DG + +EEF M++
Sbjct: 455 DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 243/451 (53%), Gaps = 20/451 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y R LG+G FG LC D G++ A K ISK++++ D E + REVQ++K L HP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI L + +ED ++V E+ GGELFD I++R ++E AA +++ ++ + H+
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
++HRDLKPEN L +K + + ++ IDFGLS F ++ + +G+ YY+APEVL Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE 206
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ DVWS GVILYILL G PPF E + + + + F+ W KVSE+AKDL++K L
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXL 266
Query: 298 NPDPKQRLTAEEVLEHPWLQNAKK---APNVSLGETVKARLKQFSVMNKLKKRALQVV-A 353
P R++A + L+H W+Q K + +V + ++QF KL + AL +
Sbjct: 267 TYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGS 326
Query: 354 EFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQ-----------NIPEADLQI 402
+ S +E L F D N G+++ + + E ++
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 403 LMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALN- 461
+++A D D +G + Y EFV V+ K + + E L +AF FD + SG I EL
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGV 446
Query: 462 DEVDTSGEDVINAIMHDVDTDKDGRISYEEF 492
+VD+ + +++ +VD + DG + ++EF
Sbjct: 447 SDVDS---ETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 248/465 (53%), Gaps = 27/465 (5%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKL---RTAVD-------IEDVRREVQIMK 111
R+LG G +G LC + N + A K I K + R + D E++ E+ ++K
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HPNI+ L D +ED ++V E EGGELF++I+ R + E AA +MK I+ +
Sbjct: 102 SLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC 160
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
H+ ++HRD+KPEN L NK +K +DFGLS FF + + +G+ YY+APEVL
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 232 KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
K+ Y + DVWS GVI+YILLCG PPF + +Q + + + + F + W +S+ AK+
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 292 LVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETV---KARLKQFSVMNKLKKRA 348
L+K ML D +R TAEE L W++ N S +T+ + +++F KL + A
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAA 340
Query: 349 LQVV-AEFLSVEEVAGLKEAFEMMDTNKRGKI---------NXXXXXXXXXXXXQNIPEA 398
+ + ++ ++EE L + F+ +D N G++ N +N+ E
Sbjct: 341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE 400
Query: 399 DLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRN 458
IL E D D +G + Y EF++V + + + ++E L +AF+ FD ++SG I EEL N
Sbjct: 401 VDNILKE-VDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELAN 459
Query: 459 ALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWR 503
+ + E N ++ + D +KD I ++EF MM D +
Sbjct: 460 LFG--LTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKICDHK 502
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 165/265 (62%), Gaps = 4/265 (1%)
Query: 53 DISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
DI+ Y L +GRG +G + + A K I K + D++ ++E++IMK
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKS 79
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
L HPNI+ L +T+ED++ +++VMELC GGELF+R+V + + E AA +MK ++ V
Sbjct: 80 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 173 CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK 232
CH+ V HRDLKPENFLF SPLK IDFGL+ F+PG+ VG+PYY++P+VL+
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
YGPE D WSAGV++Y+LLCG PPF A T+ V I F W VS A+ L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQ 317
++++L PKQR+T+ + LEH W +
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 165/265 (62%), Gaps = 4/265 (1%)
Query: 53 DISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
DI+ Y L +GRG +G + + A K I K + D++ ++E++IMK
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKS 62
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
L HPNI+ L +T+ED++ +++VMELC GGELF+R+V + + E AA +MK ++ V
Sbjct: 63 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 173 CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK 232
CH+ V HRDLKPENFLF SPLK IDFGL+ F+PG+ VG+PYY++P+VL+
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
YGPE D WSAGV++Y+LLCG PPF A T+ V I F W VS A+ L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQ 317
++++L PKQR+T+ + LEH W +
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/298 (42%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ ELGRG + Y C + +A K + K VD + VR E+ ++ L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKK-----TVDKKIVRTEIGVLLRL-SHP 108
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI+ LK+ +E + + +V+EL GGELFDRIV +G+Y+ER AA +K I+E V HE G
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG 168
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR-NYG 236
++HRDLKPEN L+A +PLK DFGLS + G+P Y APE+L+ YG
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYG 228
Query: 237 PEVDVWSAGVILYILLCGVPPFWAET-EQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
PEVD+WS G+I YILLCG PF+ E +Q + + I+ F W +VS NAKDLV+K
Sbjct: 229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRK 288
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALQVVA 353
++ DPK+RLT + L+HPW+ KA N +T + +L++F+ KLK VVA
Sbjct: 289 LIVLDPKKRLTTFQALQHPWVTG--KAANFVHMDTAQKKLQEFNARRKLKAAVKAVVA 344
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 185/299 (61%), Gaps = 6/299 (2%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L ELG+G F V C + G+++A K I+ KKL +A D + + RE +I + L KH
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLL-KH 62
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L D+ ++ ++V +L GGELF+ IVAR +Y+E A+ ++ I+E V CH
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ-FNEIVGSPYYMAPEVLKRN- 234
G++HRDLKPEN L A+K + + +K DFGL++ + +Q + G+P Y++PEVL+++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD+W+ GVILYILL G PPFW E + + Q I DF W V+ AKDL+
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 295 KMLNPDPKQRLTAEEVLEHPWL-QNAKKAPNVSLGETVKARLKQFSVMNKLKKRALQVV 352
KML +P +R+TA E L+HPW+ Q + A + ETV LK+F+ KLK L +
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDC-LKKFNARRKLKGAILTTM 300
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 185/299 (61%), Gaps = 6/299 (2%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L ELG+G F V C + G+++A K I+ KKL +A D + + RE +I + L KH
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICR-LLKH 62
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L D+ ++ ++V +L GGELF+ IVAR +Y+E A+ ++ I+E V CH
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ-FNEIVGSPYYMAPEVLKRN- 234
G++HRDLKPEN L A+K + + +K DFGL++ + +Q + G+P Y++PEVL+++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD+W+ GVILYILL G PPFW E + + Q I DF W V+ AKDL+
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 295 KMLNPDPKQRLTAEEVLEHPWL-QNAKKAPNVSLGETVKARLKQFSVMNKLKKRALQVV 352
KML +P +R+TA E L+HPW+ Q + A + ETV LK+F+ KLK L +
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDC-LKKFNARRKLKGAILTTM 300
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 8/292 (2%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y L ELG+G F V C V G+++A K I+ KKL +A D + + RE +I + L KHP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREARICR-LLKHP 81
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV L D+ ++ +++ +L GGELF+ IVAR +Y+E A+ ++ I+E V CH+ G
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ--FNEIVGSPYYMAPEVLKRN- 234
V+HRDLKPEN L A+K + + +K DFGL++ GEQ + G+P Y++PEVL+++
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD+W+ GVILYILL G PPFW E + + Q I DF W V+ AKDL+
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 295 KMLNPDPKQRLTAEEVLEHPWLQN-AKKAPNVSLGETVKARLKQFSVMNKLK 345
KML +P +R+TA E L+HPW+ + + A + ETV LK+F+ KLK
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDC-LKKFNARRKLK 311
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 186/300 (62%), Gaps = 8/300 (2%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L ELG+G F V C V G+++A I+ KKL +A D + + RE +I + L KH
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICR-LLKH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L D+ ++ +++ +L GGELF+ IVAR +Y+E A+ ++ I+E V CH+
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ--FNEIVGSPYYMAPEVLKRN 234
GV+HR+LKPEN L A+K + + +K DFGL++ GEQ + G+P Y++PEVL+++
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 235 -YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
YG VD+W+ GVILYILL G PPFW E + + Q I DF W V+ AKDL+
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 248
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQN-AKKAPNVSLGETVKARLKQFSVMNKLKKRALQVV 352
KML +P +R+TA E L+HPW+ + + A + ETV LK+F+ KLK L V+
Sbjct: 249 NKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDC-LKKFNARRKLKGAILTVM 307
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 183/301 (60%), Gaps = 5/301 (1%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
S +YD+ ELG+G F V C G +FA K I+ KKL +A D + + RE +I + L
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL 85
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
+HPNIV L D+ +++S ++V +L GGELF+ IVAR Y+E A+ ++ I+E + C
Sbjct: 86 -QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H G++HR+LKPEN L A+K + + +K DFGL++ E ++ G+P Y++PEVLK+
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 204
Query: 234 N-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
+ Y VD+W+ GVILYILL G PPFW E + + I D+ W V+ AK L
Sbjct: 205 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 264
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVSLGETVKARLKQFSVMNKLKKRALQV 351
+ ML +PK+R+TA++ L+ PW+ N ++ A + +TV LK+F+ KLK L
Sbjct: 265 IDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDC-LKKFNARRKLKGAILTT 323
Query: 352 V 352
+
Sbjct: 324 M 324
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 163/264 (61%), Gaps = 1/264 (0%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y R LG+G FG LC D G++ A K ISK++++ D E + REVQ++K L HP
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 92
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI+ L + +ED ++V E+ GGELFD I++R ++E AA +++ ++ + H+
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
++HRDLKPEN L +K + + ++ IDFGLS F ++ + +G+ YY+APEVL Y
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 212
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ DVWS GVILYILL G PPF E + + + + F+ W KVSE+AKDL++KML
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
Query: 298 NPDPKQRLTAEEVLEHPWLQNAKK 321
P R++A + L+H W+Q K
Sbjct: 273 TYVPSMRISARDALDHEWIQTYTK 296
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 182/292 (62%), Gaps = 6/292 (2%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L ++G+G F V C + G ++A K I+ KKL +A D + + RE +I + L KH
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARICR-LLKH 62
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
NIV L D+ ++ ++V +L GGELF+ IVAR +Y+E A+ ++ I+E V CH+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ-FNEIVGSPYYMAPEVLKRN- 234
GV+HRDLKPEN L A+K + + +K DFGL++ + +Q + G+P Y++PEVL++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD+W+ GVILYILL G PPFW E + + Q I DF W V+ AK+L+
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 242
Query: 295 KMLNPDPKQRLTAEEVLEHPWL-QNAKKAPNVSLGETVKARLKQFSVMNKLK 345
+ML +P +R+TA E L+HPW+ Q + A + ETV+ LK+F+ KLK
Sbjct: 243 QMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVEC-LKKFNARRKLK 293
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 160/265 (60%), Gaps = 1/265 (0%)
Query: 52 QDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMK 111
Q +S Y ++LG G +G LC D G + A K I K + T + + EV ++K
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HPNI+ L + +ED ++VME+ GGELFD I+ R ++E AA +MK ++
Sbjct: 77 QL-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
H+ ++HRDLKPEN L +K + +K +DFGLS F G + E +G+ YY+APEVL
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 232 KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
++ Y + DVWS GVILYILLCG PPF +T+Q + + + + F W +VS+ AK
Sbjct: 196 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ 255
Query: 292 LVKKMLNPDPKQRLTAEEVLEHPWL 316
LVK ML +P +R++AEE L HPW+
Sbjct: 256 LVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 168/269 (62%), Gaps = 3/269 (1%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
S +YD+ ELG+G F V C G +FA K I+ KKL +A D + + RE +I + L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL 62
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
+HPNIV L D+ +++S ++V +L GGELF+ IVAR Y+E A+ ++ I+E + C
Sbjct: 63 -QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H G++HR+LKPEN L A+K + + +K DFGL++ E ++ G+P Y++PEVLK+
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 234 N-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
+ Y VD+W+ GVILYILL G PPFW E + + I D+ W V+ AK L
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 241
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
+ ML +PK+R+TA++ L+ PW+ N ++
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWICNRER 270
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 168/269 (62%), Gaps = 3/269 (1%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
S +YD+ ELG+G F V C G +FA K I+ KKL +A D + + RE +I + L
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL 61
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
+HPNIV L D+ +++S ++V +L GGELF+ IVAR Y+E A+ ++ I+E + C
Sbjct: 62 -QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H G++HR+LKPEN L A+K + + +K DFGL++ E ++ G+P Y++PEVLK+
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 180
Query: 234 N-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
+ Y VD+W+ GVILYILL G PPFW E + + I D+ W V+ AK L
Sbjct: 181 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 240
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
+ ML +PK+R+TA++ L+ PW+ N ++
Sbjct: 241 IDSMLTVNPKKRITADQALKVPWICNRER 269
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 166/266 (62%), Gaps = 3/266 (1%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
S +YD+ ELG+G F V C G +FA K I+ KKL +A D + + RE +I + L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL 62
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
+HPNIV L D+ +++S ++V +L GGELF+ IVAR Y+E A+ ++ I+E + C
Sbjct: 63 -QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H G++HR+LKPEN L A+K + + +K DFGL++ E ++ G+P Y++PEVLK+
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 234 N-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
+ Y VD+W+ GVILYILL G PPFW E + + I D+ W V+ AK L
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 241
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQN 318
+ ML +PK+R+TA++ L+ PW+ N
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWICN 267
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 184/300 (61%), Gaps = 8/300 (2%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L ELG+G F V C +++A K I+ KKL +A D + + RE +I + L KH
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICR-LLKH 89
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L D+ ++ ++V +L GGELF+ IVAR +Y+E A+ + I+E V H+
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ--FNEIVGSPYYMAPEVLKRN 234
++HRDLKPEN L A+K + + +K DFGL++ + GEQ + G+P Y++PEVL+++
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 235 -YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
YG VD+W+ GVILYILL G PPFW E + + Q I DF W V+ AK+L+
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 268
Query: 294 KKMLNPDPKQRLTAEEVLEHPWL-QNAKKAPNVSLGETVKARLKQFSVMNKLKKRALQVV 352
+ML +P +R+TA++ L+HPW+ Q + A + ETV+ L++F+ KLK L +
Sbjct: 269 NQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVEC-LRKFNARRKLKGAILTTM 327
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 159/260 (61%), Gaps = 2/260 (0%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ LG+G FG C D +++A K I+K + D + REV+++K L HP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI+ L + ED S+ +IV EL GGELFD I+ R ++E AA ++K + + H+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
++HRDLKPEN L +K++ +K IDFGLS F+ + + +G+ YY+APEVL+ Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ DVWSAGVILYILL G PPF+ + E + + + F W +S++AKDL++KML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 298 NPDPKQRLTAEEVLEHPWLQ 317
P R+TA + LEHPW+Q
Sbjct: 262 TFHPSLRITATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 159/260 (61%), Gaps = 2/260 (0%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ LG+G FG C D +++A K I+K + D + REV+++K L HP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI+ L + ED S+ +IV EL GGELFD I+ R ++E AA ++K + + H+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
++HRDLKPEN L +K++ +K IDFGLS F+ + + +G+ YY+APEVL+ Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ DVWSAGVILYILL G PPF+ + E + + + F W +S++AKDL++KML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 298 NPDPKQRLTAEEVLEHPWLQ 317
P R+TA + LEHPW+Q
Sbjct: 262 TFHPSLRITATQCLEHPWIQ 281
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 173/288 (60%), Gaps = 5/288 (1%)
Query: 51 GQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIM 110
+DI ++ LG G F L + G+ FA K I KK L+ + E+ ++
Sbjct: 17 AEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIAVL 74
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
+ + KH NIV+L+D YE + +++VM+L GGELFDRIV +G YTE+ A+ +++ +++ V
Sbjct: 75 RKI-KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAV 133
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
H G++HRDLKPEN L+ ++ E S + DFGLS G+ + G+P Y+APEV
Sbjct: 134 YYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEV 193
Query: 231 L-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
L ++ Y VD WS GVI YILLCG PPF+ E + + + I+++ +F W +S++A
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSA 253
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQ 337
KD ++ ++ DP +R T E+ HPW+ A N ++ E+V A++++
Sbjct: 254 KDFIRNLMEKDPNKRYTCEQAARHPWIA-GDTALNKNIHESVSAQIRK 300
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 175/297 (58%), Gaps = 5/297 (1%)
Query: 51 GQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIM 110
+DI YD LG G F L D + A K I+KK L + E+ ++
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVL 70
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
H KHPNIV+L D YE ++++M+L GGELFDRIV +G YTER A+ ++ +++ V
Sbjct: 71 -HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 129
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
+ H+ G++HRDLKPEN L+ + E S + DFGLS PG + G+P Y+APEV
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 231 L-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
L ++ Y VD WS GVI YILLCG PPF+ E + + + I+++ +F W +S++A
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKK 346
KD ++ ++ DP++R T E+ L+HPW+ A + ++ ++V ++K+ +K K+
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 175/297 (58%), Gaps = 5/297 (1%)
Query: 51 GQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIM 110
+DI YD LG G F L D + A K I+K+ L + E+ ++
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL 70
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
H KHPNIV+L D YE ++++M+L GGELFDRIV +G YTER A+ ++ +++ V
Sbjct: 71 -HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 129
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
+ H+ G++HRDLKPEN L+ + E S + DFGLS PG + G+P Y+APEV
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 231 L-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
L ++ Y VD WS GVI YILLCG PPF+ E + + + I+++ +F W +S++A
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKK 346
KD ++ ++ DP++R T E+ L+HPW+ A + ++ ++V ++K+ +K K+
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 175/297 (58%), Gaps = 5/297 (1%)
Query: 51 GQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIM 110
+DI YD LG G F L D + A K I+K+ L + E+ ++
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL 70
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
H KHPNIV+L D YE ++++M+L GGELFDRIV +G YTER A+ ++ +++ V
Sbjct: 71 -HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 129
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
+ H+ G++HRDLKPEN L+ + E S + DFGLS PG + G+P Y+APEV
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 231 L-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
L ++ Y VD WS GVI YILLCG PPF+ E + + + I+++ +F W +S++A
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKK 346
KD ++ ++ DP++R T E+ L+HPW+ A + ++ ++V ++K+ +K K+
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 183/305 (60%), Gaps = 12/305 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA--VDIEDVRREVQIMKHLPK 115
Y+L +G+G F V C + G++FA K + K ++ + ED++RE I H+ K
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HMLK 84
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH----YTERAAAAVMKTIVEVVQ 171
HP+IV L +TY D +++V E +G +L IV R Y+E A+ M+ I+E ++
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEV 230
CH+ ++HRD+KPEN L A+K+ S+P+K DFG+++ G VG+P++MAPEV
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 231 LKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+KR YG VDVW GVIL+ILL G PF+ T++ + + II+ W +SE+A
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVSLGETVKARLKQFSVMNKLKKRA 348
KDLV++ML DP +R+T E L HPWL+ + A + L ETV+ +L++F+ KLK
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE-QLRKFNARRKLKGAV 322
Query: 349 LQVVA 353
L V+
Sbjct: 323 LAAVS 327
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 160/267 (59%), Gaps = 4/267 (1%)
Query: 51 GQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIM 110
+DI YD LG G F L D + A K I+K+ L + E+ ++
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL 70
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
H KHPNIV+L D YE ++++M+L GGELFDRIV +G YTER A+ ++ +++ V
Sbjct: 71 -HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 129
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
+ H+ G++HRDLKPEN L+ + E S + DFGLS PG + G+P Y+APEV
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 231 L-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
L ++ Y VD WS GVI YILLCG PPF+ E + + + I+++ +F W +S++A
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWL 316
KD ++ ++ DP++R T E+ L+HPW+
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 153/254 (60%), Gaps = 6/254 (2%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG G F +L G+ FA K I K A + E+ ++K + KH NIV+L+
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKI-KHENIVTLE 72
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
D YE + ++VM+L GGELFDRI+ RG YTE+ A+ V++ ++ V+ HE G++HRDL
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDL 132
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL-KRNYGPEVDVW 242
KPEN L+ +E+S + DFGLS + G + G+P Y+APEVL ++ Y VD W
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCW 191
Query: 243 SAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPK 302
S GVI YILLCG PPF+ ETE + + I +F+ W +SE+AKD + +L DP
Sbjct: 192 SIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPN 251
Query: 303 QRLTAEEVLEHPWL 316
+R T E+ L HPW+
Sbjct: 252 ERYTCEKALSHPWI 265
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 180/305 (59%), Gaps = 12/305 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA--VDIEDVRREVQIMKHLPK 115
Y+L +G+G F V C + G++FA K + K ++ + ED++RE I H+ K
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HMLK 86
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH----YTERAAAAVMKTIVEVVQ 171
HP+IV L +TY D +++V E +G +L IV R Y+E A+ M+ I+E ++
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEV 230
CH+ ++HRD+KP L A+K+ S+P+K FG+++ G VG+P++MAPEV
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 206
Query: 231 LKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+KR YG VDVW GVIL+ILL G PF+ T++ + + II+ W +SE+A
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESA 265
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVSLGETVKARLKQFSVMNKLKKRA 348
KDLV++ML DP +R+T E L HPWL+ + A + L ETV+ +L++F+ KLK
Sbjct: 266 KDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE-QLRKFNARRKLKGAV 324
Query: 349 LQVVA 353
L V+
Sbjct: 325 LAAVS 329
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 180/305 (59%), Gaps = 12/305 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA--VDIEDVRREVQIMKHLPK 115
Y+L +G+G F V C + G++FA K + K ++ + ED++RE I H+ K
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HMLK 84
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH----YTERAAAAVMKTIVEVVQ 171
HP+IV L +TY D +++V E +G +L IV R Y+E A+ M+ I+E ++
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEV 230
CH+ ++HRD+KP L A+K+ S+P+K FG+++ G VG+P++MAPEV
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 231 LKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+KR YG VDVW GVIL+ILL G PF+ T++ + + II+ W +SE+A
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVSLGETVKARLKQFSVMNKLKKRA 348
KDLV++ML DP +R+T E L HPWL+ + A + L ETV+ +L++F+ KLK
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE-QLRKFNARRKLKGAV 322
Query: 349 LQVVA 353
L V+
Sbjct: 323 LAAVS 327
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 161/271 (59%), Gaps = 10/271 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL---RTAVDIEDVRREVQIMKHLP 114
Y++G ELG G+F + C G+++A K I K++L R V E++ REV I++ +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI- 65
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPNI++L D +E+ + V +++EL GGELFD + + TE A +K I++ V H
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K +P +K IDFG++ G +F I G+P ++APE++
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-- 183
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF ET+Q I DF + + SE AK
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 243
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
D ++++L DPK+R+T + LEH W++ ++
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 161/273 (58%), Gaps = 10/273 (3%)
Query: 52 QDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL---RTAVDIEDVRREVQ 108
+D+ Y++G ELG G+F + C G+++A K I K++L R V E++ REV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 109 IMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
I++ + +HPNI++L D +E+ + V +++EL GGELFD + + TE A +K I++
Sbjct: 68 ILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
V H + + H DLKPEN + +K +P +K IDFG++ G +F I G+P ++A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 228 PEVLKRNYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
PE++ NY P E D+WS GVI YILL G PF ET+Q I DF + +
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 244
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
SE AKD ++++L DPK+R+ + LEH W++
Sbjct: 245 TSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 160/271 (59%), Gaps = 10/271 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL---RTAVDIEDVRREVQIMKHLP 114
Y++G ELG G+F + C G+++A K I K++L R V E++ REV I++ +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI- 86
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPNI++L D +E+ + V +++EL GGELFD + + TE A +K I++ V H
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K +P +K IDFG++ G +F I G+P ++APE++
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-- 204
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF ET+Q I DF + + SE AK
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 264
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
D ++++L DPK+R+ + LEH W++ ++
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWIKAIRR 295
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 159/266 (59%), Gaps = 10/266 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD+G ELG G+F + C + + G ++A K I K++ R + V E++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
HPNI++L D YE+ + V +++EL GGELFD + + +E A + +K I++ V H
Sbjct: 74 -HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q I DF + + + SE AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWL 316
D ++K+L + ++RLT +E L HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 70
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 188
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 158/266 (59%), Gaps = 10/266 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD+G ELG G+F + C + + G ++A K I K++ R + V E++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
H N+++L D YE+ + V +++EL GGELFD + + +E A + +K I++ V H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q I DF + + + SE AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWL 316
D ++K+L + ++RLT +E L HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 70
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 188
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 157/266 (59%), Gaps = 10/266 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD+G ELG G+F + C + + G ++A K I K++ R + V E++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
H N+++L D YE+ + V +++EL GGELFD + + +E A + +K I++ V H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q I DF + + SE AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWL 316
D ++K+L + ++RLT +E L HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 158/266 (59%), Gaps = 10/266 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD+G ELG G+F + C + + G ++A K I K++ R + V E++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
H N+++L D YE+ + V +++EL GGELFD + + +E A + +K I++ V H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q I DF + + + SE AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWL 316
D ++K+L + ++RLT +E L HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 157/266 (59%), Gaps = 10/266 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD+G ELG G+F + C + + G ++A K I K++ R + V E++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
H N+++L D YE+ + V +++EL GGELFD + + +E A + +K I++ V H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q I DF + + SE AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWL 316
D ++K+L + ++RLT +E L HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 157/266 (59%), Gaps = 10/266 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD+G ELG G+F + C + + G ++A K I K++ R + V E++ REV I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
H N+++L D YE+ + V +++EL GGELFD + + +E A + +K I++ V H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ + H DLKPEN + +K P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q I DF + + SE AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWL 316
D ++K+L + ++RLT +E L HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 158/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V +++EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 158/267 (59%), Gaps = 10/267 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTA---VDIEDVRREVQIMKHLP 114
YD G ELG G+F V C + + G ++A K I K++ +++ V ED+ REV I+K +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI- 71
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
+HPN+++L + YE+ + V ++ EL GGELFD + + TE A +K I+ V H
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 175 EQGVMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+ H DLKPEN + ++ P +K IDFGL+ G +F I G+P ++APE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 234 NYGP---EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
NY P E D+WS GVI YILL G PF +T+Q + +F+ + + S AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D ++++L DPK+R+T ++ L+HPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 152/272 (55%), Gaps = 15/272 (5%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVD-IEDVR----REVQIMKH 112
YD +GRG V C G +FA K + R + + +E+VR RE I++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
+ HP+I++L D+YE S + +V +L GELFD + + +E+ ++M++++E V
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 173 CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK 232
H ++HRDLKPEN L + + ++ DFG S PGE+ E+ G+P Y+APE+LK
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQ---IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 233 RN-------YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKV 285
+ YG EVD+W+ GVIL+ LL G PPFW + + + I+ F W
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 286 SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
S KDL+ ++L DP+ RLTAE+ L+HP+ +
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 157/262 (59%), Gaps = 8/262 (3%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
R+LG G FG +L + ++G + K+I+K R+ V +E + E++++K L HPNI+
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKD--RSQVPMEQIEAEIEVLKSL-DHPNIIK 84
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIV---ARGH-YTERAAAAVMKTIVEVVQVCHEQG 177
+ + +ED ++IVME CEGGEL +RIV ARG +E A +MK ++ + H Q
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
V+H+DLKPEN LF + SP+K IDFGL+ F+ E G+ YMAPEV KR+
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF 204
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
+ D+WSAGV++Y LL G PF + + V Q ++ + P ++ A DL+K+ML
Sbjct: 205 KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQML 263
Query: 298 NPDPKQRLTAEEVLEHPWLQNA 319
DP++R +A +VL H W + A
Sbjct: 264 TKDPERRPSAAQVLHHEWFKQA 285
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 153/275 (55%), Gaps = 16/275 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSI--SKKKLRTAVDIEDVR----REVQIM 110
+Y+ LGRG V C +++A K I + +A +++++R +EV I+
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
+ + HPNI+ LKDTYE ++ +V +L + GELFD + + +E+ +M+ ++EV+
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
H+ ++HRDLKPEN L + +K DFG S PGE+ E+ G+P Y+APE+
Sbjct: 125 CALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 181
Query: 231 LKRN-------YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP 283
++ + YG EVD+WS GVI+Y LL G PPFW + + + I+ F W
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 241
Query: 284 KVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
S+ KDLV + L P++R TAEE L HP+ Q
Sbjct: 242 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 153/275 (55%), Gaps = 16/275 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSI--SKKKLRTAVDIEDVR----REVQIM 110
+Y+ LGRG V C +++A K I + +A +++++R +EV I+
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
+ + HPNI+ LKDTYE ++ +V +L + GELFD + + +E+ +M+ ++EV+
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
H+ ++HRDLKPEN L + +K DFG S PGE+ E+ G+P Y+APE+
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 231 LKRN-------YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP 283
++ + YG EVD+WS GVI+Y LL G PPFW + + + I+ F W
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 254
Query: 284 KVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
S+ KDLV + L P++R TAEE L HP+ Q
Sbjct: 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 146/272 (53%), Gaps = 12/272 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-----RTAVDIEDVRREVQIMK 111
+Y + + LG G G L + +K A K ISK+K R A +V E++I+K
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HP I+ +K+ + D +IV+EL EGGELFD++V E ++ VQ
Sbjct: 71 KL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
HE G++HRDLKPEN L ++++E +K DFG S + G+P Y+APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAE-TEQGVAQAIIRSVIDFKRDPWPKVS 286
Y VD WS GVIL+I L G PPF T+ + I +F + W +VS
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
E A DLVKK+L DPK R T EE L HPWLQ+
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 146/272 (53%), Gaps = 12/272 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-----RTAVDIEDVRREVQIMK 111
+Y + + LG G G L + +K A K ISK+K R A +V E++I+K
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HP I+ +K+ + D +IV+EL EGGELFD++V E ++ VQ
Sbjct: 70 KL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
HE G++HRDLKPEN L ++++E +K DFG S + G+P Y+APEVL
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 187
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAE-TEQGVAQAIIRSVIDFKRDPWPKVS 286
Y VD WS GVIL+I L G PPF T+ + I +F + W +VS
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 247
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
E A DLVKK+L DPK R T EE L HPWLQ+
Sbjct: 248 EKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 146/272 (53%), Gaps = 12/272 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-----RTAVDIEDVRREVQIMK 111
+Y + + LG G G L + +K A K ISK+K R A +V E++I+K
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HP I+ +K+ + D +IV+EL EGGELFD++V E ++ VQ
Sbjct: 71 KL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
HE G++HRDLKPEN L ++++E +K DFG S + G+P Y+APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAE-TEQGVAQAIIRSVIDFKRDPWPKVS 286
Y VD WS GVIL+I L G PPF T+ + I +F + W +VS
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
E A DLVKK+L DPK R T EE L HPWLQ+
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 146/272 (53%), Gaps = 12/272 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-----RTAVDIEDVRREVQIMK 111
+Y + + LG G G L + +K A K ISK+K R A +V E++I+K
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HP I+ +K+ + D +IV+EL EGGELFD++V E ++ VQ
Sbjct: 71 KL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
HE G++HRDLKPEN L ++++E +K DFG S + G+P Y+APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAE-TEQGVAQAIIRSVIDFKRDPWPKVS 286
Y VD WS GVIL+I L G PPF T+ + I +F + W +VS
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
E A DLVKK+L DPK R T EE L HPWLQ+
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 151/287 (52%), Gaps = 19/287 (6%)
Query: 49 PSGQDISI-------DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-----RT 96
P G +S+ +Y + + LG G G L + +K A K ISK+K R
Sbjct: 2 PLGSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 61
Query: 97 AVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTE 156
A +V E++I+K L HP I+ +K+ + D +IV+EL EGGELFD++V E
Sbjct: 62 ADPALNVETEIEILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKE 119
Query: 157 RAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
++ VQ HE G++HRDLKPEN L ++++E +K DFG S
Sbjct: 120 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 217 NEIVGSPYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPFWAE-TEQGVAQAII 271
+ G+P Y+APEVL Y VD WS GVIL+I L G PPF T+ + I
Sbjct: 180 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 239
Query: 272 RSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+F + W +VSE A DLVKK+L DPK R T EE L HPWLQ+
Sbjct: 240 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 153/279 (54%), Gaps = 19/279 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ ++G G + V C +FA K I K K D E++I+ +HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI++LKD Y+D V++V EL +GGEL D+I+ + ++ER A+AV+ TI + V+ H QG
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 178 VMHRDLKPENFLFANKK-ESSPLKAIDFGLSVFFRPGEQFNEIVGSPYY----MAPEVLK 232
V+HRDLKP N L+ ++ ++ DFG + R N ++ +P Y +APEVL+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE---NGLLMTPCYTANFVAPEVLE 193
Query: 233 RN-YGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
R Y D+WS GV+LY +L G PF +T + + I W VS+
Sbjct: 194 RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
AKDLV KML+ DP QRLTA VL HPW+ + + P L
Sbjct: 254 AKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 152/279 (54%), Gaps = 19/279 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y + +G G + C ++A K I K K D E++I+ +HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI++LKD Y+D V++V EL GGEL D+I+ + ++ER A+ V+ TI + V+ H QG
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 178 VMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYY----MAPEVLK 232
V+HRDLKP N L+ ++ + L+ DFG + R N ++ +P Y +APEVLK
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE---NGLLMTPCYTANFVAPEVLK 198
Query: 233 RN-YGPEVDVWSAGVILYILLCGVPPFW---AETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
R Y D+WS G++LY +L G PF ++T + + I W VSE
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
AKDLV KML+ DP QRLTA++VL+HPW+ K P L
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 146/272 (53%), Gaps = 12/272 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-----RTAVDIEDVRREVQIMK 111
+Y + + LG G G L + +K A + ISK+K R A +V E++I+K
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HP I+ +K+ + D +IV+EL EGGELFD++V E ++ VQ
Sbjct: 210 KL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
HE G++HRDLKPEN L ++++E +K DFG S + G+P Y+APEVL
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 327
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAE-TEQGVAQAIIRSVIDFKRDPWPKVS 286
Y VD WS GVIL+I L G PPF T+ + I +F + W +VS
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 387
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
E A DLVKK+L DPK R T EE L HPWLQ+
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 152/275 (55%), Gaps = 16/275 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSI--SKKKLRTAVDIEDVR----REVQIM 110
+Y+ LGRG V C +++A K I + +A +++++R +EV I+
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
+ + HPNI+ LKDTYE ++ +V +L + GELFD + + +E+ +M+ ++EV+
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
H+ ++HRDLKPEN L + +K DFG S PGE+ + G+P Y+APE+
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEI 194
Query: 231 LKRN-------YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP 283
++ + YG EVD+WS GVI+Y LL G PPFW + + + I+ F W
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 254
Query: 284 KVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
S+ KDLV + L P++R TAEE L HP+ Q
Sbjct: 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 152/279 (54%), Gaps = 19/279 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y + +G G + C ++A K I K K D E++I+ +HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI++LKD Y+D V++V EL GGEL D+I+ + ++ER A+ V+ TI + V+ H QG
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 178 VMHRDLKPENFLFANKKESSP-LKAIDFGLSVFFRPGEQFNEIVGSPYY----MAPEVLK 232
V+HRDLKP N L+ ++ + L+ DFG + R N ++ +P Y +APEVLK
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE---NGLLMTPCYTANFVAPEVLK 198
Query: 233 RN-YGPEVDVWSAGVILYILLCGVPPFW---AETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
R Y D+WS G++LY +L G PF ++T + + I W VSE
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
AKDLV KML+ DP QRLTA++VL+HPW+ K P L
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 146/272 (53%), Gaps = 12/272 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-----RTAVDIEDVRREVQIMK 111
+Y + + LG G G L + +K A + ISK+K R A +V E++I+K
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
L HP I+ +K+ + D +IV+EL EGGELFD++V E ++ VQ
Sbjct: 196 KL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
HE G++HRDLKPEN L ++++E +K DFG S + G+P Y+APEVL
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAE-TEQGVAQAIIRSVIDFKRDPWPKVS 286
Y VD WS GVIL+I L G PPF T+ + I +F + W +VS
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 373
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
E A DLVKK+L DPK R T EE L HPWLQ+
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 152/294 (51%), Gaps = 25/294 (8%)
Query: 48 EPSGQDISIDYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRRE 106
EP ++ DY L ++ LG G G C G+K A L+ D R+E
Sbjct: 1 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA--------LKLLYDSPKARQE 52
Query: 107 VQIMKHLPKHPNIVSLKDTYED----DSAVHIVMELCEGGELFDRIVARGH--YTERAAA 160
V P+IV + D YE+ + I+ME EGGELF RI RG +TER AA
Sbjct: 53 VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA 112
Query: 161 AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ--FNE 218
+M+ I +Q H + HRD+KPEN L+ +K++ + LK DFG F + Q
Sbjct: 113 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQT 169
Query: 219 IVGSPYYMAPEVL-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSV--- 274
+PYY+APEVL Y D+WS GVI+YILLCG PPF++ T Q ++ + R +
Sbjct: 170 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 229
Query: 275 -IDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
F W +VSE+AK L++ +L DP +RLT + + HPW+ + P L
Sbjct: 230 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 152/294 (51%), Gaps = 25/294 (8%)
Query: 48 EPSGQDISIDYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRRE 106
EP ++ DY L ++ LG G G C G+K A L+ D R+E
Sbjct: 20 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA--------LKLLYDSPKARQE 71
Query: 107 VQIMKHLPKHPNIVSLKDTYED----DSAVHIVMELCEGGELFDRIVARGH--YTERAAA 160
V P+IV + D YE+ + I+ME EGGELF RI RG +TER AA
Sbjct: 72 VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA 131
Query: 161 AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ--FNE 218
+M+ I +Q H + HRD+KPEN L+ +K++ + LK DFG F + Q
Sbjct: 132 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQT 188
Query: 219 IVGSPYYMAPEVL-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSV--- 274
+PYY+APEVL Y D+WS GVI+YILLCG PPF++ T Q ++ + R +
Sbjct: 189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248
Query: 275 -IDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
F W +VSE+AK L++ +L DP +RLT + + HPW+ + P L
Sbjct: 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 163/311 (52%), Gaps = 25/311 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ ++G G + V C +FA K I K K D E++I+ +HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NI++LKD Y+D V++V EL +GGEL D+I+ + ++ER A+AV+ TI + V+ H QG
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 178 VMHRDLKPENFLFANKK-ESSPLKAIDFGLSVFFRPGEQFNEIVGSPYY----MAPEVLK 232
V+HRDLKP N L+ ++ ++ DFG + R N ++ +P Y +APEVL+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE---NGLLXTPCYTANFVAPEVLE 193
Query: 233 RN-YGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
R Y D+WS GV+LY L G PF +T + + I W VS+
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLG-----ETVK-ARLKQFSVMN 342
AKDLV K L+ DP QRLTA VL HPW+ + + P L VK A +S +N
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAXAATYSALN 313
Query: 343 KLKKRALQVVA 353
+ + L+ V
Sbjct: 314 RNQSPVLEPVG 324
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 148/283 (52%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 16 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 67
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + E +PYY+APE
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPE 187
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 188 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 68 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 119
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 120 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 239
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 240 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 299
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 300 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 342
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 113
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 336
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 69
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 189
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 190 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 69
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 189
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 190 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 32 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 83
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 84 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 203
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 204 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 263
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 264 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 306
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 16 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 67
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 187
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 188 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 17 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 68
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 69 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 188
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 189 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 248
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 249 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 291
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 24 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 75
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 76 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 195
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 196 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 255
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 256 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 298
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 22 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 73
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 74 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 193
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 194 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 253
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 254 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 296
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 23 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 74
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 75 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 194
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D+WS GVI+YILLCG PPF++ G+ I +F W +
Sbjct: 195 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 254
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 255 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 297
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 10/307 (3%)
Query: 13 GKRAKGKKEKPNPFYGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVT 72
G + +GK + P D++ V + +K+ S D YD+ ELG G FGV
Sbjct: 11 GSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDY---YDILEELGSGAFGVV 67
Query: 73 YLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAV 132
+ C + G F K I+ +D V+ E+ IM L HP +++L D +ED +
Sbjct: 68 HRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEM 123
Query: 133 HIVMELCEGGELFDRIVARGH-YTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFA 191
+++E GGELFDRI A + +E M+ E ++ HE ++H D+KPEN +
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE 183
Query: 192 NKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRN-YGPEVDVWSAGVILYI 250
KK SS +K IDFGL+ P E + + APE++ R G D+W+ GV+ Y+
Sbjct: 184 TKKASS-VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYV 242
Query: 251 LLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEV 310
LL G+ PF E + Q + R +F D + VS AKD +K +L +P++RLT +
Sbjct: 243 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 302
Query: 311 LEHPWLQ 317
LEHPWL+
Sbjct: 303 LEHPWLK 309
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 146/259 (56%), Gaps = 7/259 (2%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG G FG + C + G K A K I K R D E+V+ E+ +M L H N++ L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKII---KTRGMKDKEEVKNEISVMNQL-DHANLIQLY 152
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGH-YTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
D +E + + +VME +GGELFDRI+ + TE MK I E ++ H+ ++H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 183 LKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNY-GPEVDV 241
LKPEN L N+ ++ +K IDFGL+ ++P E+ G+P ++APEV+ ++ D+
Sbjct: 213 LKPENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDM 271
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDP 301
WS GVI Y+LL G+ PF + + I+ D + + + +SE AK+ + K+L +
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEK 331
Query: 302 KQRLTAEEVLEHPWLQNAK 320
R++A E L+HPWL + K
Sbjct: 332 SWRISASEALKHPWLSDHK 350
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 152/262 (58%), Gaps = 10/262 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D+GR LG+G+FG YL + N A K + K +L +RRE++I HL +H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RH 74
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ + + + D +++++E GEL+ + G + E+ +A M+ + + + CHE+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L K E LK DFG SV P + + G+ Y+ PE+++ + +
Sbjct: 135 KVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+W AGV+ Y L G+PPF + + + I+ +D K P+ +S+ +KDL+ K
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFPPF--LSDGSKDLISK 246
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ 317
+L P QRL + V+EHPW++
Sbjct: 247 LLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 152/262 (58%), Gaps = 10/262 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D+GR LG+G+FG YL + N A K + K +L +RRE++I HL +H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ + + + D +++++E GEL+ + G + E+ +A M+ + + + CHE+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L K E LK DFG SV P + + G+ Y+ PE+++ + +
Sbjct: 134 KVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+W AGV+ Y L G+PPF + + + I+ +D K P+ +S+ +KDL+ K
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFPPF--LSDGSKDLISK 245
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ 317
+L P QRL + V+EHPW++
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 28/314 (8%)
Query: 58 YDLG---RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLP 114
YDL + LG G F + C + + FA K ISK+ + ++E+ +K
Sbjct: 10 YDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEITALKLCE 63
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
HPNIV L + + D +VMEL GGELF+RI + H++E A+ +M+ +V V H
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ-FNEIVGSPYYMAPEVLKR 233
+ GV+HRDLKPEN LF ++ ++ +K IDFG + P Q + +Y APE+L +
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ 183
Query: 234 N-YGPEVDVWSAGVILYILLCGVPPFWAE-------TEQGVAQAIIRSVIDFKRDPWPKV 285
N Y D+WS GVILY +L G PF + + + + I + F+ + W V
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243
Query: 286 SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-------APNV--SLGETVKARLK 336
S+ AKDL++ +L DP +RL + + WLQ+ + P++ S G V +K
Sbjct: 244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVK 303
Query: 337 -QFSVMNKLKKRAL 349
F NK K+
Sbjct: 304 ATFHAFNKYKREGF 317
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 148/269 (55%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D+GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL-RH 71
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + + G+ Y+ PE+++ R +
Sbjct: 132 RVIHRDIKPENLLLGSNGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMH 187
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G+PPF A T Q + I R F V+E A+DL+ +
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISR 243
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L + QRLT EVLEHPW++ P+
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 152/262 (58%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G++ A + I K +L ++ ++ + REV+IMK L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREVRIMKVL-NH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++VME GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + +E GSP Y APE+ K+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKY 189
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
K L +P +R T E++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 147/269 (54%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D+GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL-RH 71
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 132 RVIHRDIKPENLLLGSNGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G+PPF A T Q + I R F V+E A+DL+ +
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISR 243
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L + QRLT EVLEHPW++ P+
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G++ A K I K +L ++ ++ + REV+IMK L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++VME GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + GSP Y APE+ K+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
K L +P +R T E++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 140/283 (49%), Gaps = 20/283 (7%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ--------DCPKARREVELHWRASQ 113
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IV E +GGELF RI RG +TER A+ + K+I E
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG + +PYY+APE
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 230 VL-KRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPK 284
VL Y D WS GVI YILLCG PPF++ G I +F W +
Sbjct: 234 VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSE 293
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
VSE K L++ +L +P QR T E HPW+ + K P L
Sbjct: 294 VSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPL 336
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G++ A K I K +L ++ ++ + REV+IMK L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++VME GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + GSP Y APE+ K+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
K L +P +R T E++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 7/261 (2%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
YD+ ELG G FGV + T+ G FA K + D E VR+E+Q M L +HP
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHP 108
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIV-ARGHYTERAAAAVMKTIVEVVQVCHEQ 176
+V+L D +EDD+ + ++ E GGELF+++ +E A M+ + + + HE
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
+H DLKPEN +F K+ S+ LK IDFGL+ P + G+ + APEV + +
Sbjct: 169 NYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
G D+WS GV+ YILL G+ PF E + + + + + +SE+ KD ++K
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 287
Query: 296 MLNPDPKQRLTAEEVLEHPWL 316
+L DP R+T + LEHPWL
Sbjct: 288 LLLADPNTRMTIHQALEHPWL 308
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 151/262 (57%), Gaps = 10/262 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D+ R LG+G+FG YL + N A K + K +L +RRE++I HL +H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ + + + D +++++E GEL+ + G + E+ +A M+ + + + CHE+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L K E LK DFG SV P + + G+ Y+ PE+++ + +
Sbjct: 134 KVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+W AGV+ Y L G+PPF + + + I+ +D K P+ +S+ +KDL+ K
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFPPF--LSDGSKDLISK 245
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ 317
+L P QRL + V+EHPW++
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 7/261 (2%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
YD+ ELG G FGV + T+ G FA K + D E VR+E+Q M L +HP
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHP 214
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIV-ARGHYTERAAAAVMKTIVEVVQVCHEQ 176
+V+L D +EDD+ + ++ E GGELF+++ +E A M+ + + + HE
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
+H DLKPEN +F K+ S+ LK IDFGL+ P + G+ + APEV + +
Sbjct: 275 NYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
G D+WS GV+ YILL G+ PF E + + + + + +SE+ KD ++K
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 393
Query: 296 MLNPDPKQRLTAEEVLEHPWL 316
+L DP R+T + LEHPWL
Sbjct: 394 LLLADPNTRMTIHQALEHPWL 414
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G++ A + I K +L ++ ++ + REV+IMK L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREVRIMKVL-NH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++VME GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + GSP Y APE+ K+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
K L +P +R T E++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G++ A K I K +L ++ ++ + REV+IMK L H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NH 65
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++VME GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + GSP Y APE+ K+
Sbjct: 126 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 238
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
K L +P +R T E++++ W+
Sbjct: 239 KFLILNPSKRGTLEQIMKDRWM 260
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G++ A K I K +L ++ ++ + REV+IMK L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++VME GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + G+P Y APE+ K+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
K L +P +R T E++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E GE++ + + E+ A + + + CH +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 244
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 245 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 152/282 (53%), Gaps = 11/282 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + ++ G+ Y+ PE+++ R +
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETVKARLK 336
+L +P QR EVLEHPW+ N+ K N E+ A L+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAAAALE 281
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E GE++ + + E+ A + + + CH +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 244
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 245 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 145/269 (53%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + N+ A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 128 KVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDF----VTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 159/288 (55%), Gaps = 8/288 (2%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y + +LGRGEFG+ + C + ++ + + K + K D V++E+ I+ ++ +H
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISIL-NIARHR 61
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQ 176
NI+ L +++E + ++ E G ++F+RI + ER + + + E +Q H
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNY- 235
+ H D++PEN ++ ++ SS +K I+FG + +PG+ F + +P Y APEV + +
Sbjct: 122 NIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
D+WS G ++Y+LL G+ PF AET Q + + I+ + F + + ++S A D V +
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVMNK 343
+L + K R+TA E L+HPWL+ + + + T+K R +++ K
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLIKK 288
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + E+ G+ Y+ PE+++ R +
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 276
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 150/277 (54%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 93
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + +++ G+ Y+ PE+++ R +
Sbjct: 154 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 265
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 266 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 302
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + ++ G+ Y+ PE+++ R +
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 244
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 245 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + ++ G+ Y+ PE+++ R +
Sbjct: 129 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 240
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 241 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 277
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 146/269 (54%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + +++ G+ Y+ PE+++ R +
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISR 242
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 243 LLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + + G+ Y+ PE+++ R +
Sbjct: 129 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 240
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 241 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 277
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 149/278 (53%), Gaps = 13/278 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 26 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 84
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 144
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 145 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-VSENAKDLVK 294
+VD+WS GV+ Y L G PPF A T Q + I R F P V+E A+DL+
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLIS 255
Query: 295 KMLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
++L +P QR EVLEHPW+ N+ K N E+
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 293
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 93
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 154 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 209
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 265
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 266 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 302
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 244
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 245 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 242
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 243 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 279
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + ++ G+ Y+ PE+++ R +
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGET 330
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKES 275
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 276
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 147/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE ++ R +
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 244
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 245 LLKHNPSQRPXLREVLEHPWITANSSKPSNCQNKESA 281
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 148/262 (56%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G + A K I K +L ++ + REV+IMK L H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + ++++ME GGE+FD +VA G E+ A + + IV VQ CH++
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + GSP Y APE+ K+
Sbjct: 131 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 243
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
+ L +P +R T E++++ W+
Sbjct: 244 RFLVLNPIKRGTLEQIMKDRWI 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 130 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 241
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 242 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 278
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 13 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 71
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 132 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 243
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 244 LLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 8 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 66
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 127 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 238
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 239 LLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 242
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 243 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 279
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 138/263 (52%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y LG LG G FG + G K A K ++++K+R+ + +RRE+Q +K L +HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
+I+ L S + +VME GGELFD I G E+ + + + I+ V CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY- 235
V+HRDLKPEN L + K DFGLS GE GSP Y APEV+ R Y
Sbjct: 137 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GPEVD+WS+GVILY LLCG PF + + + I + + P V L+K
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS----LLKH 249
Query: 296 MLNPDPKQRLTAEEVLEHPWLQN 318
ML DP +R T +++ EH W +
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 239
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 142/261 (54%), Gaps = 10/261 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISR 242
Query: 296 MLNPDPKQRLTAEEVLEHPWL 316
+L +P QR EVLEHPW+
Sbjct: 243 LLKHNPSQRPMLREVLEHPWI 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 144/271 (53%), Gaps = 10/271 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG S P + + G+ Y+ PE+++ R +
Sbjct: 129 RVIHRDIKPENLLLGSAGE---LKIADFGWSCH-APSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 240
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVS 326
+L +P QR EVLEHPW+ P+ S
Sbjct: 241 LLKHNPSQRPMLREVLEHPWITANSSKPSNS 271
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 148/262 (56%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G + A K I K +L ++ + REV+IMK L H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + ++++ME GGE+FD +VA G E+ A + + IV VQ CH++
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + G+P Y APE+ K+
Sbjct: 134 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 246
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
+ L +P +R T E++++ W+
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWI 268
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK +FG SV P + + G+ Y+ PE+++ R +
Sbjct: 130 RVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 241
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ-NAKKAPNVSLGETV 331
+L +P QR EVLEHPW+ N+ K N E+
Sbjct: 242 LLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 278
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK +FG SV P + + G+ Y+ PE+++ R +
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISR 242
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
+L +P QR EVLEHPW+ P+
Sbjct: 243 LLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 141/261 (54%), Gaps = 10/261 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + A K + K +L A +RREV+I HL +H
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 64
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 125 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISR 236
Query: 296 MLNPDPKQRLTAEEVLEHPWL 316
+L +P QR EVLEHPW+
Sbjct: 237 LLKHNPSQRPMLREVLEHPWI 257
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 142/261 (54%), Gaps = 10/261 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K +L A +RREV+I HL +H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + D + V++++E G ++ + + E+ A + + + CH +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN L + E LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+WS GV+ Y L G PPF A T Q + I R F V+E A+DL+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISR 242
Query: 296 MLNPDPKQRLTAEEVLEHPWL 316
+L +P QR EVLEHPW+
Sbjct: 243 LLKHNPSQRPMLREVLEHPWI 263
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 138/282 (48%), Gaps = 39/282 (13%)
Query: 57 DYDLGRE-LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
DY + + LG G G + EKFA K + D RREV++ +
Sbjct: 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQ 69
Query: 116 HPNIVSLKDTYEDDSA----VHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
P+IV + D YE+ A + IVME +GGELF RI RG +TER A+ +MK+I E
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q H + HRD+KPEN L+ +K+ ++ LK DFG A E
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------AKE 169
Query: 230 VLKRNYGPEVDVWSAGVILYILLCGVPPFWAE----TEQGVAQAIIRSVIDFKRDPWPKV 285
Y D+WS GVI+YILLCG PPF++ G+ I +F W +V
Sbjct: 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 229
Query: 286 SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
SE K L++ +L +P QR+T E + HPW+ + K P L
Sbjct: 230 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 152/309 (49%), Gaps = 52/309 (16%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRREVQIMKHLPK 115
Y L +G+G +GV + + A K ++K K+R D+E ++ EV++MK L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-H 86
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI--------------VARGHYT------ 155
HPNI L + YED+ + +VMELC GG L D++ V +
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 156 --------------------ERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKE 195
E+ + +M+ I + H QG+ HRD+KPENFLF+ K
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK- 205
Query: 196 SSPLKAIDFGLSVFF---RPGEQFNEIV--GSPYYMAPEVLK---RNYGPEVDVWSAGVI 247
S +K +DFGLS F GE + G+PY++APEVL +YGP+ D WSAGV+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 248 LYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTA 307
L++LL G PF + ++ + F+ + +S A+DL+ +LN + +R A
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325
Query: 308 EEVLEHPWL 316
L+HPW+
Sbjct: 326 MRALQHPWI 334
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 135/263 (51%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y LG LG G FG + G K A K ++++K+R+ + ++RE+Q +K L +HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
+I+ L + +VME GGELFD I G E A + + I+ V CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY- 235
V+HRDLKPEN L + K DFGLS GE + GSP Y APEV+ R Y
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GPEVD+WS GVILY LLCG PF E + + I V ++ + L+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLMH 244
Query: 296 MLNPDPKQRLTAEEVLEHPWLQN 318
ML DP +R T +++ EH W +
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 146/261 (55%), Gaps = 11/261 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L + G++ A K I K +L ++ ++ + REV+I K L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIXKVL-NH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++V E GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + G+P Y APE+ K+
Sbjct: 133 FIVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ S + ++L+K
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YXSTDCENLLK 245
Query: 295 KMLNPDPKQRLTAEEVLEHPW 315
K L +P +R T E++ + W
Sbjct: 246 KFLILNPSKRGTLEQIXKDRW 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 144/270 (53%), Gaps = 14/270 (5%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+L +G G F L + GE A K + K L + D+ ++ E++ +K+L +H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNL-RHQ 68
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
+I L E + + +V+E C GGELFD I+++ +E V + IV V H QG
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFN--EIVGSPYYMAPEVL--KR 233
HRDLKPEN LF E LK IDFGL + + ++ GS Y APE++ K
Sbjct: 129 YAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 234 NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
G E DVWS G++LY+L+CG PF + + + I+R D + W +S ++ L+
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSSILLL 241
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
++ML DPK+R++ + +L HPW+ P
Sbjct: 242 QQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 134/263 (50%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y LG LG G FG + G K A K ++++K+R+ + ++RE+Q +K L +HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
+I+ L + +VME GGELFD I G E A + + I+ V CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY- 235
V+HRDLKPEN L + K DFGLS GE GSP Y APEV+ R Y
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GPEVD+WS GVILY LLCG PF E + + I V ++ + L+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLMH 244
Query: 296 MLNPDPKQRLTAEEVLEHPWLQN 318
ML DP +R T +++ EH W +
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 149/262 (56%), Gaps = 11/262 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y L + +G+G F L V G + A K I K +L ++ + REV+IMK L H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKIL-NH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNIV L + E + +++VME GGE+FD +VA G E+ A A + IV VQ CH++
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLK EN L +K DFG S F G + + GSP Y APE+ K+
Sbjct: 134 YIVHRDLKAENLLLDGDMN---IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
GPEVDVWS GVILY L+ G PF + + + + ++R R P+ +S + ++L+K
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 246
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
K+L +P +R + E++++ W+
Sbjct: 247 KLLVLNPIKRGSLEQIMKDRWM 268
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 163/326 (50%), Gaps = 21/326 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y + LG G FG L T +K A K IS++ L+ + V RE+ +K L +HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHP 69
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
+I+ L D + + +V+E GGELFD IV + TE + I+ ++ CH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRNY 235
++HRDLKPEN L ++ +K DFGLS G GSP Y APEV+ K
Sbjct: 129 IVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVI---DFKRDPWPKVSENAKDL 292
GPEVDVWS G++LY++L G PF E + + + V DF +S A+ L
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSL 238
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKR---AL 349
+++M+ DP QR+T +E+ PW N + E V+ +++KL + +
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPWF-NVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSE 297
Query: 350 QVVAEFLSVEEVAGLKEAFEMMDTNK 375
+ E L +E +KEA+ ++ N+
Sbjct: 298 DYIVEALRSDENNEVKEAYNLLHENQ 323
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 13/264 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y + + LG G FG L G+K A K I+KK L + + RE+ ++ L +H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P+I+ L D + + +V+E G ELFD IV R +E+ A + I+ V+ CH
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLKPEN L E +K DFGLS G GSP Y APEV+ K
Sbjct: 132 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-VSENAKDLV 293
GPEVDVWS GVILY++LC PF E+ + + I V PK +S A L+
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLI 243
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQ 317
K+ML +P R++ E+++ W +
Sbjct: 244 KRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 13/264 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y + + LG G FG L G+K A K I+KK L + + RE+ ++ L +H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P+I+ L D + + +V+E G ELFD IV R +E+ A + I+ V+ CH
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLKPEN L E +K DFGLS G GSP Y APEV+ K
Sbjct: 133 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-VSENAKDLV 293
GPEVDVWS GVILY++LC PF E+ + + I V PK +S A L+
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLI 244
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQ 317
K+ML +P R++ E+++ W +
Sbjct: 245 KRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 35/296 (11%)
Query: 58 YDLGREL-GRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
Y L EL G G + + NG+++A K I K+ + V REV+ + +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR---SRVFREVETLYQCQGN 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
NI+ L + +EDD+ ++V E +GG + I + H+ ER A+ V++ + + H +
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV--------GSPYYMAP 228
G+ HRDLKPEN L + ++ SP+K DF L + I GS YMAP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 229 EVLK------RNYGPEVDVWSAGVILYILLCGVPPF---------WAETE------QGVA 267
EV++ Y D+WS GV+LYI+L G PPF W E +
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 250
Query: 268 QAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
++I +F W +S AKDL+ K+L D KQRL+A +VL+HPW+Q +AP
Sbjct: 251 ESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG--QAP 304
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 13/264 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y + + LG G FG L G+K A K I+KK L + + RE+ ++ L +H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RH 63
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P+I+ L D + + +V+E G ELFD IV R +E+ A + I+ V+ CH
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLKPEN L E +K DFGLS G GSP Y APEV+ K
Sbjct: 123 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-VSENAKDLV 293
GPEVDVWS GVILY++LC PF E+ + + I V PK +S A L+
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLI 234
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQ 317
K+ML +P R++ E+++ W +
Sbjct: 235 KRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 13/264 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y + + LG G FG L G+K A K I+KK L + + RE+ ++ L +H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P+I+ L D + + +V+E G ELFD IV R +E+ A + I+ V+ CH
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRN 234
++HRDLKPEN L E +K DFGLS G GSP Y APEV+ K
Sbjct: 127 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-VSENAKDLV 293
GPEVDVWS GVILY++LC PF E+ + + I V PK +S A L+
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLI 238
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQ 317
K+ML +P R++ E+++ W +
Sbjct: 239 KRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 144/264 (54%), Gaps = 11/264 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ +G LG+G F Y ++ G + A K I KK + A ++ V+ EV+I L KH
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH-YTERAAAAVMKTIVEVVQVCHE 175
P+I+ L + +ED + V++V+E+C GE+ + R ++E A M I+ + H
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVLKRN 234
G++HRDL N L +K DFGL+ + P E+ + G+P Y++PE+ R+
Sbjct: 131 HGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 235 -YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
+G E DVWS G + Y LL G PPF +T + ++ + D++ + +S AKDL+
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--LADYEMPSF--LSIEAKDLI 243
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQ 317
++L +P RL+ VL+HP++
Sbjct: 244 HQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 142/262 (54%), Gaps = 8/262 (3%)
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIV 120
+ELGRG+F V C + G+++A K + KK+ R ++ E+ +++ P ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFL-KKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 121 SLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGV 178
+L + YE+ S + +++E GGE+F + +E ++K I+E V H+ +
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP- 237
+H DLKP+N L ++ +K +DFG+S + EI+G+P Y+APE+L NY P
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL--NYDPI 210
Query: 238 --EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
D+W+ G+I Y+LL PF E Q I + +D+ + + VS+ A D ++
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQS 270
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ 317
+L +P++R TAE L H WLQ
Sbjct: 271 LLVKNPEKRPTAEICLSHSWLQ 292
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 145/295 (49%), Gaps = 38/295 (12%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKK--KLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
LG G C ++ +++A K I K+ +R+ V REV+++ H N++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-----FREVEMLYQCQGHRNVLE 75
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L + +E++ ++V E GG + I R H+ E A+ V++ + + H +G+ HR
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEI--------VGSPYYMAPEVLK- 232
DLKPEN L + + SP+K DFGL + + I GS YMAPEV++
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 233 -----RNYGPEVDVWSAGVILYILLCGVPPF---------WAETEQGVA------QAIIR 272
Y D+WS GVILYILL G PPF W E A ++I
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 273 SVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
+F W +S AKDL+ K+L D KQRL+A +VL+HPW+Q AP +L
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC--APENTL 308
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+L +++G G FGV L D + E A K I + + +D E+V+RE+ + L +HP
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKREIINHRSL-RHP 74
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV K+ + + IVME GGELF+RI G ++E A + ++ V CH
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRNY- 235
V HRDLK EN L + + LK DFG S Q VG+P Y+APEV LK+ Y
Sbjct: 135 VCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID--FKRDPWPKVSENAKDLV 293
G DVWS GV LY++L G PF E + I +++ + + +S + L+
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 253
Query: 294 KKMLNPDPKQRLTAEEVLEHPWL 316
++ DP +R++ E+ H W
Sbjct: 254 SRIFVADPAKRISIPEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+L +++G G FGV L D + E A K I + + A +V+RE+ + L +HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA----NVKREIINHRSL-RHP 75
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV K+ + + IVME GGELF+RI G ++E A + ++ V CH
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRNY- 235
V HRDLK EN L + + LK DFG S Q VG+P Y+APEV LK+ Y
Sbjct: 136 VCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID--FKRDPWPKVSENAKDLV 293
G DVWS GV LY++L G PF E + I +++ + + +S + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 294 KKMLNPDPKQRLTAEEVLEHPWL 316
++ DP +R++ E+ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 140/262 (53%), Gaps = 10/262 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++GR LG+G+FG YL + + A K + K ++ +RRE++I HL H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-HH 82
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
PNI+ L + + D +++++E GEL+ + + E+ A +M+ + + + CH +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
V+HRD+KPEN LK DFG SV P + + G+ Y+ PE+++ R +
Sbjct: 143 KVIHRDIKPEN---LLLGLKGELKIADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+VD+W GV+ Y LL G PPF + + + I++ + F V A+DL+ K
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS----VPTGAQDLISK 254
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ 317
+L +P +RL +V HPW++
Sbjct: 255 LLRHNPSERLPLAQVSAHPWVR 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+L +++G G FGV L D + E A K I + + +D E+V+RE+ + L +HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKREIINHRSL-RHP 75
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV K+ + + IVME GGELF+RI G ++E A + ++ V CH
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRNY- 235
V HRDLK EN L + + LK FG S Q + VG+P Y+APEV LK+ Y
Sbjct: 136 VCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID--FKRDPWPKVSENAKDLV 293
G DVWS GV LY++L G PF E + I +++ + + +S + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 294 KKMLNPDPKQRLTAEEVLEHPWL 316
++ DP +R++ E+ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 38/295 (12%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKK--KLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
LG G C ++ +++A K I K+ +R+ V REV+++ H N++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-----FREVEMLYQCQGHRNVLE 75
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L + +E++ ++V E GG + I R H+ E A+ V++ + + H +G+ HR
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEI--------VGSPYYMAPEVLK- 232
DLKPEN L + + SP+K DF L + + I GS YMAPEV++
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 233 -----RNYGPEVDVWSAGVILYILLCGVPPF---------WAETEQGVA------QAIIR 272
Y D+WS GVILYILL G PPF W E A ++I
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 273 SVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
+F W +S AKDL+ K+L D KQRL+A +VL+HPW+Q AP +L
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC--APENTL 308
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 135/263 (51%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+L +++G G FGV L D + E A K I + + +D E+V+RE+ + L +HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKREIINHRSL-RHP 75
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV K+ + + IVME GGELF+RI G ++E A + ++ V CH
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRNY- 235
V HRDLK EN L + + LK FG S Q VG+P Y+APEV LK+ Y
Sbjct: 136 VCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID--FKRDPWPKVSENAKDLV 293
G DVWS GV LY++L G PF E + I +++ + + +S + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 294 KKMLNPDPKQRLTAEEVLEHPWL 316
++ DP +R++ E+ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 10/263 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+L +++G G FGV L D E A K I + + +D E+V+RE+ + L +HP
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE---KID-ENVKREIINHRSL-RHP 75
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV K+ + + IVME GGELF+RI G ++E A + ++ V H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRNY- 235
V HRDLK EN L + + LK DFG S Q VG+P Y+APEV LK+ Y
Sbjct: 136 VAHRDLKLENTLL-DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID--FKRDPWPKVSENAKDLV 293
G DVWS GV LY++L G PF E + I +++ + + +S + L+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 294 KKMLNPDPKQRLTAEEVLEHPWL 316
++ DP +R++ E+ H W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 131/264 (49%), Gaps = 12/264 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
YD +++G G FGV L D E A K I + A+D E+V+RE+ + L +HP
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG---AAID-ENVQREIINHRSL-RHP 76
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV K+ + + I+ME GGEL++RI G ++E A + ++ V CH
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNY-- 235
+ HRDLK EN L + + LK DFG S Q VG+P Y+APEVL R
Sbjct: 137 ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP---KVSENAKDL 292
G DVWS GV LY++L G PF E + I+ ++ K P ++S L
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IPDDIRISPECCHL 254
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWL 316
+ ++ DP R++ E+ H W
Sbjct: 255 ISRIFVADPATRISIPEIKTHSWF 278
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F T L ++ ++A K + K+ + + V RE +M L H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 89
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 150 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 262
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ + T ++G+ A K K LR E + EV IM+ +H N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDY-QHENVVEM 82
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
++Y + +VME EGG L D IV E AAV +++ + V H QGV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKR-NYGPEVD 240
+K ++ L + +K DFG + + +VG+PY+MAPE++ R YGPEVD
Sbjct: 142 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
+WS G+++ ++ G PP++ E A +IR + + KVS + K + ++L D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 301 PKQRLTAEEVLEHPWLQNAKKAPNVSL 327
P QR TA E+L+HP+L AK P S+
Sbjct: 258 PAQRATAAELLKHPFL--AKAGPPASI 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ + T ++G+ A K K LR E + EV IM+ +H N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDY-QHENVVEM 86
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
++Y + +VME EGG L D IV E AAV +++ + V H QGV+HRD
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKR-NYGPEVD 240
+K ++ L + +K DFG + + +VG+PY+MAPE++ R YGPEVD
Sbjct: 146 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
+WS G+++ ++ G PP++ E A +IR + + KVS + K + ++L D
Sbjct: 203 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 301 PKQRLTAEEVLEHPWLQNAKKAPNVSL 327
P QR TA E+L+HP+L AK P S+
Sbjct: 262 PAQRATAAELLKHPFL--AKAGPPASI 286
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ + T ++G+ A K K LR E + EV IM+ +H N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDY-QHENVVEM 91
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
++Y + +VME EGG L D IV E AAV +++ + V H QGV+HRD
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKR-NYGPEVD 240
+K ++ L + +K DFG + + +VG+PY+MAPE++ R YGPEVD
Sbjct: 151 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
+WS G+++ ++ G PP++ E A +IR + + KVS + K + ++L D
Sbjct: 208 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 266
Query: 301 PKQRLTAEEVLEHPWLQNAKKAPNVSL 327
P QR TA E+L+HP+L AK P S+
Sbjct: 267 PAQRATAAELLKHPFL--AKAGPPASI 291
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ + T ++G+ A K K LR E + EV IM+ +H N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDY-QHENVVEM 136
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
++Y + +VME EGG L D IV E AAV +++ + V H QGV+HRD
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKR-NYGPEVD 240
+K ++ L + +K DFG + + +VG+PY+MAPE++ R YGPEVD
Sbjct: 196 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
+WS G+++ ++ G PP++ E A +IR + + KVS + K + ++L D
Sbjct: 253 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 301 PKQRLTAEEVLEHPWLQNAKKAPNVSL 327
P QR TA E+L+HP+L AK P S+
Sbjct: 312 PAQRATAAELLKHPFL--AKAGPPASI 336
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ + T ++G+ A K K LR E + EV IM+ +H N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDY-QHENVVEM 93
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
++Y + +VME EGG L D IV E AAV +++ + V H QGV+HRD
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKR-NYGPEVD 240
+K ++ L + +K DFG + + +VG+PY+MAPE++ R YGPEVD
Sbjct: 153 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
+WS G+++ ++ G PP++ E A +IR + + KVS + K + ++L D
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 268
Query: 301 PKQRLTAEEVLEHPWLQNAKKAPNVSL 327
P QR TA E+L+HP+L AK P S+
Sbjct: 269 PAQRATAAELLKHPFL--AKAGPPASI 293
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ + T ++G+ A K K LR E + EV IM+ +H N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDY-QHENVVEM 213
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
++Y + +VME EGG L D IV E AAV +++ + V H QGV+HRD
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKR-NYGPEVD 240
+K ++ L + +K DFG + + +VG+PY+MAPE++ R YGPEVD
Sbjct: 273 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
+WS G+++ ++ G PP++ E A +IR + + KVS + K + ++L D
Sbjct: 330 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 301 PKQRLTAEEVLEHPWLQNAKKAPNVSL 327
P QR TA E+L+HP+L AK P S+
Sbjct: 389 PAQRATAAELLKHPFL--AKAGPPASI 413
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 26/289 (8%)
Query: 57 DYDLGRELGRGEFGVTYLCTDV---NNGEKFACKSISKKKL-RTAVDIEDVRREVQIMKH 112
+++L + LG G +G +L + + G+ +A K + K + + A E R E Q+++H
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
+ + P +V+L ++ ++ +H++++ GGELF + R +TE + IV ++
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 173 CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRP--GEQFNEIVGSPYYMAPEV 230
H+ G+++RD+K EN L + + + DFGLS F E+ + G+ YMAP++
Sbjct: 175 LHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 231 LK---RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-VS 286
++ + VD WS GV++Y LL G PF + E+ I R ++ P+P+ +S
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMS 290
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWLQN-------AKKAP 323
AKDL++++L DPK+RL A+E+ EH + Q AKK P
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVP 339
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 88
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 149 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 261
Query: 293 VKKMLNPDPKQRLTAEEV 310
V+K+L D +RL EE+
Sbjct: 262 VEKLLVLDATKRLGCEEM 279
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 92
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 153 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 265
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 297
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 91
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 152 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 264
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 88
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 149 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 261
Query: 293 VKKMLNPDPKQRLTAEEV 310
V+K+L D +RL EE+
Sbjct: 262 VEKLLVLDATKRLGCEEM 279
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 89
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 150 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 262
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 89
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 150 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 262
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 89
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 150 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 262
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 92
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 153 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 265
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 297
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 66
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 127 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 239
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQNA 319
V+K+L D +RL EE + HP+ ++
Sbjct: 240 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 134 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 246
Query: 293 VKKMLNPDPKQRLTAEEV 310
V+K+L D +RL EE+
Sbjct: 247 VEKLLVLDATKRLGCEEM 264
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 91
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 152 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 264
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 128 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 240
Query: 293 VKKMLNPDPKQRLTAEEV 310
V+K+L D +RL EE+
Sbjct: 241 VEKLLVLDATKRLGCEEM 258
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 91
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 152 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 264
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 129 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 241
Query: 293 VKKMLNPDPKQRLTAEEV 310
V+K+L D +RL EE+
Sbjct: 242 VEKLLVLDATKRLGCEEM 259
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 130 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 242
Query: 293 VKKMLNPDPKQRLTAEEV 310
V+K+L D +RL EE+
Sbjct: 243 VEKLLVLDATKRLGCEEM 260
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 94
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 155 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----ARDL 267
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 268 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 299
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 91
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 152 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + II+ DF +PK A+DL
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDL 264
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 91
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + G L I G + E IV ++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 152 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 264
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 96
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L ++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 157 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + Q II+ DF +PK A+DL
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDL 269
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 270 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y GR LG+G F Y TD++ E FA K + K L E + E+ I K L +P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNP 102
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
++V +EDD V++V+E+C L + R TE A M+ ++ VQ H
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNY 235
V+HRDLK N LF N + +K DFGL+ GE+ ++ G+P Y+APEVL K+ +
Sbjct: 163 VIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
EVD+WS G ILY LL G PPF + I ++ R ++ A L+++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 296 MLNPDPKQRLTAEEVL 311
ML+ DP R + E+L
Sbjct: 276 MLHADPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y GR LG+G F Y TD++ E FA K + K L E + E+ I K L +P
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNP 86
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
++V +EDD V++V+E+C L + R TE A M+ ++ VQ H
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNY 235
V+HRDLK N LF N + +K DFGL+ GE+ ++ G+P Y+APEVL K+ +
Sbjct: 147 VIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
EVD+WS G ILY LL G PPF + I ++ R ++ A L+++
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 259
Query: 296 MLNPDPKQRLTAEEVL 311
ML+ DP R + E+L
Sbjct: 260 MLHADPTLRPSVAELL 275
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 102/166 (61%), Gaps = 4/166 (2%)
Query: 336 KQFSVMNKLKKRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNI 395
KQFS NK KK AL+V+AE LS EE+AGLKE F +D +K G+I N+
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 396 PEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEE 455
E+++ L +AADVD G+++Y EF+A ++HL K+ ++HL AF++FD++ SG+I +E
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 456 LRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAGT 500
L+ A + EDV I + DVD D DGRI Y EF + G+
Sbjct: 121 LQQACE---EFGVEDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 18/272 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ G+ LG G F L ++ ++A K + K+ + + V RE +M L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 91
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P V L T++DD ++ + + GEL I G + E IV ++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVL-K 232
G++HRDLKPEN L E ++ DFG + P + N VG+ Y++PE+L +
Sbjct: 152 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
++ D+W+ G I+Y L+ G+PPF A E + II+ DF +PK A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDL 264
Query: 293 VKKMLNPDPKQRLTAEE------VLEHPWLQN 318
V+K+L D +RL EE + HP+ ++
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 131/256 (51%), Gaps = 10/256 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y GR LG+G F Y TD++ E FA K + K L E + E+ I K L +P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNP 102
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
++V +EDD V++V+E+C L + R TE A M+ ++ VQ H
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNY 235
V+HRDLK N LF N + +K DFGL+ GE+ + G+P Y+APEVL K+ +
Sbjct: 163 VIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
EVD+WS G ILY LL G PPF + I ++ R ++ A L+++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 296 MLNPDPKQRLTAEEVL 311
ML+ DP R + E+L
Sbjct: 276 MLHADPTLRPSVAELL 291
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 131/256 (51%), Gaps = 10/256 (3%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y GR LG+G F Y TD++ E FA K + K L E + E+ I K L +P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNP 102
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
++V +EDD V++V+E+C L + R TE A M+ ++ VQ H
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNY 235
V+HRDLK N LF N + +K DFGL+ GE+ + G+P Y+APEVL K+ +
Sbjct: 163 VIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
EVD+WS G ILY LL G PPF + I ++ R ++ A L+++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 296 MLNPDPKQRLTAEEVL 311
ML+ DP R + E+L
Sbjct: 276 MLHADPTLRPSVAELL 291
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 135/267 (50%), Gaps = 15/267 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + +LK ++ + VME GGELF + +TE A IV ++ H +
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN- 234
V++RD+K EN + + +K DFGL G G+P Y+APEVL+ N
Sbjct: 128 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W GV++Y ++CG PF+ + + + + I+ I F R +S AK L+
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLA 240
Query: 295 KMLNPDPKQRL-----TAEEVLEHPWL 316
+L DPKQRL A+EV+EH +
Sbjct: 241 GLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + +LK ++ + VME GGELF + +TE A IV ++ H +
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN- 234
V++RD+K EN + + +K DFGL G G+P Y+APEVL+ N
Sbjct: 130 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W GV++Y ++CG PF+ + + + + I+ I F R +S AK L+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLA 242
Query: 295 KMLNPDPKQRL-----TAEEVLEH 313
+L DPKQRL A+EV+EH
Sbjct: 243 GLLKKDPKQRLGGGPSDAKEVMEH 266
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRH 64
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + +LK ++ + VME GGELF + +TE A IV ++ H +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN- 234
V++RD+K EN + + +K DFGL G G+P Y+APEVL+ N
Sbjct: 125 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W GV++Y ++CG PF+ + + + + I+ I F R +S AK L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLA 237
Query: 295 KMLNPDPKQRL-----TAEEVLEH 313
+L DPKQRL A+EV+EH
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRH 64
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + +LK ++ + VME GGELF + +TE A IV ++ H +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN- 234
V++RD+K EN + + +K DFGL G G+P Y+APEVL+ N
Sbjct: 125 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W GV++Y ++CG PF+ + + + + I+ I F R +S AK L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLA 237
Query: 295 KMLNPDPKQRL-----TAEEVLEH 313
+L DPKQRL A+EV+EH
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRH 64
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + +LK ++ + VME GGELF + +TE A IV ++ H +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN- 234
V++RD+K EN + + +K DFGL G G+P Y+APEVL+ N
Sbjct: 125 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W GV++Y ++CG PF+ + + + + I+ I F R +S AK L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLA 237
Query: 295 KMLNPDPKQRL-----TAEEVLEH 313
+L DPKQRL A+EV+EH
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 135/267 (50%), Gaps = 15/267 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRH 64
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + +LK ++ + VME GGELF + +TE A IV ++ H +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN- 234
V++RD+K EN + + +K DFGL G G+P Y+APEVL+ N
Sbjct: 125 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W GV++Y ++CG PF+ + + + + I+ I F R +S AK L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLA 237
Query: 295 KMLNPDPKQRL-----TAEEVLEHPWL 316
+L DPKQRL A+EV+EH +
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+D + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRH 64
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + +LK ++ + VME GGELF + +TE A IV ++ H +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN- 234
V++RD+K EN + + +K DFGL G G+P Y+APEVL+ N
Sbjct: 125 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W GV++Y ++CG PF+ + + + + I+ I F R +S AK L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLA 237
Query: 295 KMLNPDPKQRL-----TAEEVLEH 313
+L DPKQRL A+EV+EH
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 140/272 (51%), Gaps = 19/272 (6%)
Query: 58 YDLGRELGRGEFGVTYLC---TDVNNGEKFACKSISKKKL-RTAVDIEDVRREVQIMKHL 113
++L R LG+G +G + T N G+ FA K + K + R A D + E I++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
KHP IV L ++ +++++E GGELF ++ G + E A + I +
Sbjct: 79 -KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK 232
H++G+++RDLKPEN + ++ +K DFGL G + G+ YMAPE+L
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 233 RN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
R+ + VD WS G ++Y +L G PPF E + I++ ++ P +++ A+D
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARD 250
Query: 292 LVKKMLNPDPKQRLT-----AEEVLEHPWLQN 318
L+KK+L + RL A EV HP+ ++
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 140/272 (51%), Gaps = 19/272 (6%)
Query: 58 YDLGRELGRGEFGVTYLC---TDVNNGEKFACKSISKKKL-RTAVDIEDVRREVQIMKHL 113
++L R LG+G +G + T N G+ FA K + K + R A D + E I++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
KHP IV L ++ +++++E GGELF ++ G + E A + I +
Sbjct: 79 -KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK 232
H++G+++RDLKPEN + ++ +K DFGL G + G+ YMAPE+L
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 233 RN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
R+ + VD WS G ++Y +L G PPF E + I++ ++ P +++ A+D
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARD 250
Query: 292 LVKKMLNPDPKQRLT-----AEEVLEHPWLQN 318
L+KK+L + RL A EV HP+ ++
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 16/267 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ + R LG G FG +L +NG +A K + K+ + +E E ++M + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE-RLMLSIVTH 65
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P I+ + T++D + ++M+ EGGELF + + A + ++ H +
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNY 235
+++RDLKPEN L ++ +K DFG + + P + + G+P Y+APEV+ + Y
Sbjct: 126 DIIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTY-XLCGTPDYIAPEVVSTKPY 180
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+D WS G+++Y +L G PF+ + I+ + + F P +E+ KDL+ +
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSR 236
Query: 296 MLNPDPKQRL-----TAEEVLEHPWLQ 317
++ D QRL E+V HPW +
Sbjct: 237 LITRDLSQRLGNLQNGTEDVKNHPWFK 263
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 21/273 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ +G G +G ++G+ K + + T + + + EV +++ L KH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KH 64
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVA----RGHYTERAAAAVMKTIVEVV 170
PNIV D D ++ ++IVME CEGG+L I R + E VM + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 171 QVCHEQG-----VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-NEIVGSPY 224
+ CH + V+HRDLKP N K+ +K DFGL+ E F E VG+PY
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDEDFAKEFVGTPY 181
Query: 225 YMAPEVLKR-NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP 283
YM+PE + R +Y + D+WS G +LY L +PPF A +++ +A I F+R P+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPY- 238
Query: 284 KVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ S+ +++ +MLN R + EE+LE+P +
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 37/289 (12%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL----------------------- 94
Y L E+G+G +GV L + N+ +A K +SKKKL
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 95 RTAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM--ELCEGGELFDRIVARG 152
+ IE V +E+ I+K L HPN+V L + +D + H+ M EL G + + +
Sbjct: 75 QPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLK 132
Query: 153 HYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRP 212
+E A + +++ ++ H Q ++HRD+KP N L E +K DFG+S F+
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKG 189
Query: 213 GEQF-NEIVGSPYYMAPEVLKRN----YGPEVDVWSAGVILYILLCGVPPFWAETEQGVA 267
+ + VG+P +MAPE L G +DVW+ GV LY + G PF E +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 268 QAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
I ++F P ++E+ KDL+ +ML+ +P+ R+ E+ HPW+
Sbjct: 250 SKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 145/278 (52%), Gaps = 13/278 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y ++G+G G Y DV G++ A I + L+ E + E+ +M+ K+P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE-NKNP 77
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV+ D+Y + +VME GG L D +V E AAV + ++ ++ H
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-Y 235
V+HRD+K +N L +K DFG P + + +E+VG+PY+MAPEV+ R Y
Sbjct: 137 VIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GP+VD+WS G++ ++ G PP+ E I + ++P K+S +D + +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNR 252
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKA 333
L+ D ++R +A+E+L+H +L+ AK P SL + A
Sbjct: 253 CLDMDVEKRGSAKELLQHQFLKIAK--PLSSLTPLIAA 288
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ +G G +G ++G+ K + + T + + + EV +++ L KH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KH 64
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVA----RGHYTERAAAAVMKTIVEVV 170
PNIV D D ++ ++IVME CEGG+L I R + E VM + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 171 QVCHEQG-----VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-NEIVGSPY 224
+ CH + V+HRDLKP N K+ +K DFGL+ F VG+PY
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKTFVGTPY 181
Query: 225 YMAPEVLKR-NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP 283
YM+PE + R +Y + D+WS G +LY L +PPF A +++ +A I F+R P+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPY- 238
Query: 284 KVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ S+ +++ +MLN R + EE+LE+P +
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ +IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + +K DFGL+ R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGLAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 140/273 (51%), Gaps = 21/273 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ +G G +G ++G+ K + + T + + + EV +++ L KH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KH 64
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVA----RGHYTERAAAAVMKTIVEVV 170
PNIV D D ++ ++IVME CEGG+L I R + E VM + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 171 QVCHEQG-----VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE-IVGSPY 224
+ CH + V+HRDLKP N K+ +K DFGL+ F + VG+PY
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPY 181
Query: 225 YMAPEVLKR-NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP 283
YM+PE + R +Y + D+WS G +LY L +PPF A +++ +A I F+R P+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPY- 238
Query: 284 KVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ S+ +++ +MLN R + EE+LE+P +
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 135/259 (52%), Gaps = 11/259 (4%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ + T+ + G++ A K K LR E + EV IM+ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDY-HHDNVVDM 107
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+Y + +VME EGG L D IV E A V +++ + H QGV+HRD
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKR-NYGPEVD 240
+K ++ L + +K DFG + + +VG+PY+MAPEV+ R YG EVD
Sbjct: 167 IKSDSILLTSDGR---IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
+WS G+++ ++ G PP++ E + I S+ +D KVS + + ML +
Sbjct: 224 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD-LHKVSSVLRGFLDLMLVRE 282
Query: 301 PKQRLTAEEVLEHPWLQNA 319
P QR TA+E+L HP+L+ A
Sbjct: 283 PSQRATAQELLGHPFLKLA 301
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 20 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 79
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 80 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 138
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L E ++ DFG + R + + G+P Y+A
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 193
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 249
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 250 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 144/262 (54%), Gaps = 23/262 (8%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G G+ L + ++G + A K + +K + E + EV IM+ +H N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDY-QHFNVVEM 107
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+Y + ++ME +GG L D IV++ E A V + +++ + H QGV+HRD
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN-YGPEVD 240
+K ++ L +K DFG + + +VG+PY+MAPEV+ R+ Y EVD
Sbjct: 167 IKSDSILLTLDGR---VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK------VSENAKDLVK 294
+WS G+++ ++ G PP+++++ QA+ R + P PK VS +D ++
Sbjct: 224 IWSLGIMVIEMVDGEPPYFSDSP---VQAMKR----LRDSPPPKLKNSHKVSPVLRDFLE 276
Query: 295 KMLNPDPKQRLTAEEVLEHPWL 316
+ML DP++R TA+E+L+HP+L
Sbjct: 277 RMLVRDPQERATAQELLDHPFL 298
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLAGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVSLG 328
L+ K+L +P R+T ++ + W L+ K P V+ G
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 34 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 94 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 207
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 263
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 264 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLXGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVSLG 328
L+ K+L +P R+T ++ + W L+ K P V+ G
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVSLG 328
L+ K+L +P R+T ++ + W L+ K P V+ G
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVSLG 328
L+ K+L +P R+T ++ + W L+ K P V+ G
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVSLG 328
L+ K+L +P R+T ++ + W L+ K P V+ G
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWF 297
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 144/278 (51%), Gaps = 13/278 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y ++G+G G Y DV G++ A I + L+ E + E+ +M+ K+P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE-NKNP 77
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV+ D+Y + +VME GG L D +V E AAV + ++ ++ H
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-Y 235
V+HRD+K +N L +K DFG P + + + +VG+PY+MAPEV+ R Y
Sbjct: 137 VIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GP+VD+WS G++ ++ G PP+ E I + ++P K+S +D + +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNR 252
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKA 333
L+ D ++R +A+E+L+H +L+ AK P SL + A
Sbjct: 253 CLDMDVEKRGSAKELLQHQFLKIAK--PLSSLTPLIAA 288
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ +IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + ++ DFGL+ R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGLAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G + E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 16/276 (5%)
Query: 46 LKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR 105
L +P + +++ + LG+G FG L + G +A K + K+ + ++
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 106 EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKT 165
E +++++ +HP + +LK +++ + VME GGELF + ++E A
Sbjct: 201 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 166 IVEVVQVCH-EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSP 223
IV + H E+ V++RDLK EN + + +K DFGL + G G+P
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 224 YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW 282
Y+APEVL+ N YG VD W GV++Y ++CG PF+ + + + + I+ I F R
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 376
Query: 283 PKVSENAKDLVKKMLNPDPKQRL-----TAEEVLEH 313
P+ AK L+ +L DPKQRL A+E+++H
Sbjct: 377 PE----AKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 16/276 (5%)
Query: 46 LKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR 105
L +P + +++ + LG+G FG L + G +A K + K+ + ++
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 106 EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKT 165
E +++++ +HP + +LK +++ + VME GGELF + ++E A
Sbjct: 198 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 166 IVEVVQVCH-EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSP 223
IV + H E+ V++RDLK EN + + +K DFGL + G G+P
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 224 YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW 282
Y+APEVL+ N YG VD W GV++Y ++CG PF+ + + + + I+ I F R
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 373
Query: 283 PKVSENAKDLVKKMLNPDPKQRL-----TAEEVLEH 313
P+ AK L+ +L DPKQRL A+E+++H
Sbjct: 374 PE----AKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEIXINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVS 326
L+ K+L +P R+T ++ + W L+ K P V+
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G + E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 54 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 114 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 172
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + G+P Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGATWTLCGTPEYLA 227
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 283
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 284 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G + E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEIXINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVS 326
L+ K+L +P R+T ++ + W L+ K P V+
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 54 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G + E A IV
Sbjct: 114 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 172
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 227
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFS 283
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 284 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G + E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 28 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 87
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G + E A IV
Sbjct: 88 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 146
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 201
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 257
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 258 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 143/278 (51%), Gaps = 13/278 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y ++G+G G Y DV G++ A I + L+ E + E+ +M+ K+P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE-NKNP 77
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV+ D+Y + +VME GG L D +V E AAV + ++ ++ H
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-Y 235
V+HRD+K +N L +K DFG P + + + +VG+PY+MAPEV+ R Y
Sbjct: 137 VIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GP+VD+WS G++ ++ G PP+ E I + ++P K+S +D + +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNR 252
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKA 333
L D ++R +A+E+L+H +L+ AK P SL + A
Sbjct: 253 CLEMDVEKRGSAKELLQHQFLKIAK--PLSSLTPLIAA 288
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G FG L + G +A K + K+ + ++ E +++++ +HP + +LK
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 74
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH-EQGVMHRD 182
+++ + VME GGELF + ++E A IV + H E+ V++RD
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN-YGPEVD 240
LK EN + + +K DFGL + G G+P Y+APEVL+ N YG VD
Sbjct: 135 LKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 191
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W GV++Y ++CG PF+ + + + + I+ I F R P+ AK L+ +L D
Sbjct: 192 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKD 247
Query: 301 PKQRL-----TAEEVLEHPWL 316
PKQRL A+E+++H +
Sbjct: 248 PKQRLGGGSEDAKEIMQHRFF 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 137/268 (51%), Gaps = 16/268 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+++ + LG+G FG L + G +A K + K+ + ++ E +++++ +H
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH-E 175
P + +LK +++ + VME GGELF + ++E A IV + H E
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN 234
+ V++RDLK EN + + +K DFGL + G G+P Y+APEVL+ N
Sbjct: 129 KNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 235 -YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
YG VD W GV++Y ++CG PF+ + + + + I+ I F R P+ AK L+
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLL 241
Query: 294 KKMLNPDPKQRL-----TAEEVLEHPWL 316
+L DPKQRL A+E+++H +
Sbjct: 242 SGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G FA K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G FA K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G FA K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWTLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVS 326
L+ K+L +P R+T ++ + W L+ K P V+
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 61
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 122 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVS 326
L+ K+L +P R+T ++ + W L+ K P V+
Sbjct: 238 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 277
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G FG L + G +A K + K+ + ++ E +++++ +HP + +LK
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 76
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH-EQGVMHRD 182
+++ + VME GGELF + ++E A IV + H E+ V++RD
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 183 LKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLKRN-YGPEVD 240
LK EN + + +K DFGL + G G+P Y+APEVL+ N YG VD
Sbjct: 137 LKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 193
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W GV++Y ++CG PF+ + + + + I+ I F R P+ AK L+ +L D
Sbjct: 194 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKD 249
Query: 301 PKQRL-----TAEEVLEHPWL 316
PKQRL A+E+++H +
Sbjct: 250 PKQRLGGGSEDAKEIMQHRFF 270
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G + E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVS 326
L+ K+L +P R+T ++ + W L+ K P V+
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 144/294 (48%), Gaps = 35/294 (11%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G +GV + C + + G+ A K + + + + RE++++K L KHPN+V+L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIK-KIALREIRMLKQL-KHPNLVNL 67
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+ + +H+V E C+ L + + E ++ ++ V CH+ +HRD
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD 127
Query: 183 LKPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL--KRNYGPEV 239
+KPEN L + S +K DFG + P + +++ V + +Y +PE+L YGP V
Sbjct: 128 VKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 240 DVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDF------------------KRDP 281
DVW+ G + LL GVP + +++ I +++ D DP
Sbjct: 185 DVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDP 244
Query: 282 ---------WPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVS 326
+P +S A L+K L+ DP +RLT E++L HP+ +N ++ +++
Sbjct: 245 EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLA 298
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVS 326
L+ K+L +P R+T ++ + W L+ K P V+
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 91
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 152 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWTLCGTPEYLAPEIILSKGYNKAVD 206
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 207 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 262
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 263 LTKRFGNLKDGVNDIKNHKWF 283
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 143/278 (51%), Gaps = 13/278 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y ++G+G G Y DV G++ A I + L+ E + E+ +M+ K+P
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE-NKNP 78
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV+ D+Y + +VME GG L D +V E AAV + ++ ++ H
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-Y 235
V+HRD+K +N L +K DFG P + + + +VG+PY+MAPEV+ R Y
Sbjct: 138 VIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GP+VD+WS G++ ++ G PP+ E I + ++P K+S +D + +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNR 253
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKA 333
L D ++R +A+E+++H +L+ AK P SL + A
Sbjct: 254 CLEMDVEKRGSAKELIQHQFLKIAK--PLSSLTPLIAA 289
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
P +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN + + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE ++ + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G + E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 12/254 (4%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPD 300
+ KDL++ +L D
Sbjct: 263 SDLKDLLRNLLQVD 276
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G + E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G +A K + K+K+ IE E +I++ + P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWF 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G + E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G +A K + K+K+ IE E +I++ + P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
R LG G FG L G +A K + K+K+ IE E +I + + P +V
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++V+E GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLLI---DQQGYIKVADFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G +A K + K+K+ IE E +I++ + P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G +A K + K+K+ IE E +I++ + P +V
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 213
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G +A K + K+K+ IE E +I++ + P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GG++F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEIXINKML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
L+ K+L +P R+T ++ + W K
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L + G +A K + K+K+ IE E +I++ + P +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G + E A IV + H +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN + + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G FG L + G +A K + K+K+ IE E +I++ + P +V
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GG++F + G ++E A IV + H +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + +K DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G +A K + K+K+ IE E +I++ + P +V
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G ++E A IV + H +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 241
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 297
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
L+ K+L +P R+T ++ + W K
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
L+ K+L +P R+T ++ + W K
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 49 PSGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
PS +D +D + LG G FG L +G +A K + K+K+ IE E
Sbjct: 33 PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+I++ + P +V L+ +++D+S +++VME GGE+F + G ++E A IV
Sbjct: 93 RILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H +++RDLKPEN L + ++ DFG + R + + G+P +A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEALA 206
Query: 228 PE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE +L + Y VD W+ GV++Y + G PPF+A+ + + I+ + F S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFS 262
Query: 287 ENAKDLVKKMLNPDPKQRL-----TAEEVLEHPWL 316
+ KDL++ +L D +R ++ H W
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
L+ K+L +P R+T ++ + W K
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 133/280 (47%), Gaps = 18/280 (6%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW----LQNAKKAPNVS 326
L+ K+L +P R+T ++ + W L+ K P V+
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ LG G FG L G +A K + K+K+ IE E +I++ + P +V
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
L+ +++D+S +++VME GGE+F + G + E A IV + H +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE-VLKRNYGPEVD 240
DLKPEN L + ++ DFG + R + + G+P Y+APE +L + Y VD
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAK--RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 213
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPD 300
W+ GV++Y + G PPF+A+ + + I+ + F S + KDL++ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 301 PKQRL-----TAEEVLEHPWL 316
+R ++ H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
L+ K+L +P R+T ++ + W K
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
L+ K+L +P R+T ++ + W K
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 14/265 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW 315
L+ K+L +P R+T ++ + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 14/265 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I K L
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKML-N 62
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 123 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPW 315
L+ K+L +P R+T ++ + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 143/278 (51%), Gaps = 13/278 (4%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y ++G+G G Y DV G++ A I + L+ E + E+ +M+ K+P
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRE-NKNP 78
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
NIV+ D+Y + +VME GG L D +V E AAV + ++ ++ H
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-Y 235
V+HR++K +N L +K DFG P + + + +VG+PY+MAPEV+ R Y
Sbjct: 138 VIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
GP+VD+WS G++ ++ G PP+ E I + ++P K+S +D + +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNR 253
Query: 296 MLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKA 333
L D ++R +A+E+++H +L+ AK P SL + A
Sbjct: 254 CLEMDVEKRGSAKELIQHQFLKIAK--PLSSLTPLIAA 289
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G F + +D + E FA K + K L E + E+ I + L H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 87
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ED+ V +V+ELC L + R TE A ++ IV Q H V+HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNYGPEVDV 241
K N LF N E +K DFGL+ GE+ + G+P Y+APEVL K+ + EVDV
Sbjct: 148 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW--PK-VSENAKDLVKKMLN 298
WS G I+Y LL G PPF ET + + + K++ + PK ++ A L++KML
Sbjct: 205 WSIGCIMYTLLVGKPPF--ET-----SCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 257
Query: 299 PDPKQRLTAEEVL 311
DP R T E+L
Sbjct: 258 TDPTARPTINELL 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 50 SGQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQ 108
S + ID ++ R LG+G FG L G+ +A K + K + D+E E +
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 109 IMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
I+ HP + L ++ + VME GG+L I + E A I+
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIIS 135
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMA 227
+ H++G+++RDLK +N L ++ K DFG+ G G+P Y+A
Sbjct: 136 ALMFLHDKGIIYRDLKLDNVLLDHEGHC---KLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 228 PEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
PE+L+ YGP VD W+ GV+LY +LCG PF AE E + +AI+ + + W +
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LH 248
Query: 287 ENAKDLVKKMLNPDPKQRLTA------EEVLEHPWLQ 317
E+A ++K + +P RL + +L HP+ +
Sbjct: 249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G F + +D + E FA K + K L E + E+ I + L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 83
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ED+ V +V+ELC L + R TE A ++ IV Q H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNYGPEVDV 241
K N LF N E +K DFGL+ GE+ + G+P Y+APEVL K+ + EVDV
Sbjct: 144 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW--PK-VSENAKDLVKKMLN 298
WS G I+Y LL G PPF ET + + + K++ + PK ++ A L++KML
Sbjct: 201 WSIGCIMYTLLVGKPPF--ET-----SCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 253
Query: 299 PDPKQRLTAEEVL 311
DP R T E+L
Sbjct: 254 TDPTARPTINELL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G F + +D + E FA K + K L E + E+ I + L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 83
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ED+ V +V+ELC L + R TE A ++ IV Q H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNYGPEVDV 241
K N LF N E +K DFGL+ GE+ + G+P Y+APEVL K+ + EVDV
Sbjct: 144 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW--PK-VSENAKDLVKKMLN 298
WS G I+Y LL G PPF ET + + + K++ + PK ++ A L++KML
Sbjct: 201 WSIGCIMYTLLVGKPPF--ET-----SCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 253
Query: 299 PDPKQRLTAEEVL 311
DP R T E+L
Sbjct: 254 TDPTARPTINELL 266
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G F + +D + E FA K + K L E + E+ I + L H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 105
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ED+ V +V+ELC L + R TE A ++ IV Q H V+HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNYGPEVDV 241
K N LF N E +K DFGL+ GE+ + G+P Y+APEVL K+ + EVDV
Sbjct: 166 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW--PK-VSENAKDLVKKMLN 298
WS G I+Y LL G PPF ET + + + K++ + PK ++ A L++KML
Sbjct: 223 WSIGCIMYTLLVGKPPF--ET-----SCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 275
Query: 299 PDPKQRLTAEEVL 311
DP R T E+L
Sbjct: 276 TDPTARPTINELL 288
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G F + +D + E FA K + K L E + E+ I + L H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 81
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ED+ V +V+ELC L + R TE A ++ IV Q H V+HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNYGPEVDV 241
K N LF N E +K DFGL+ GE+ + G+P Y+APEVL K+ + EVDV
Sbjct: 142 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW--PK-VSENAKDLVKKMLN 298
WS G I+Y LL G PPF ET + + + K++ + PK ++ A L++KML
Sbjct: 199 WSIGCIMYTLLVGKPPF--ET-----SCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 251
Query: 299 PDPKQRLTAEEVL 311
DP R T E+L
Sbjct: 252 TDPTARPTINELL 264
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 128/271 (47%), Gaps = 14/271 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPK 115
D+DL + LG G +G L + E A K + K+ AVD E++++E+ I L
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINAML-N 63
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
H N+V + + ++ +E C GGELFDRI E A ++ V H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPYYMAPEVLK 232
G+ HRD+KPEN L E LK DFGL+ FR + N++ G+ Y+APE+LK
Sbjct: 124 IGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 233 RN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK 290
R + VDVWS G++L +L G P W + + +PW K+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
L+ K+L +P R+T ++ + W K
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G F + +D + E FA K + K L E + E+ I + L H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 107
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ED+ V +V+ELC L + R TE A ++ IV Q H V+HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFR-PGEQFNEIVGSPYYMAPEVL-KRNYGPEVDV 241
K N LF N E +K DFGL+ GE+ + G+P Y+APEVL K+ + EVDV
Sbjct: 168 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW--PK-VSENAKDLVKKMLN 298
WS G I+Y LL G PPF ET + + + K++ + PK ++ A L++KML
Sbjct: 225 WSIGCIMYTLLVGKPPF--ET-----SCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 277
Query: 299 PDPKQRLTAEEVL 311
DP R T E+L
Sbjct: 278 TDPTARPTINELL 290
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G +GV Y + N GE FA K I +K + +R E+ I+K L KH NIV L
Sbjct: 9 KIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL-KHSNIVKL 65
Query: 123 KDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
D + +V E + +L D V G A + + ++ + CH++ V+H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL--KRNYGP 237
RDLKP+N L + E LK DFGL+ F P ++ V + +Y AP+VL + Y
Sbjct: 124 RDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK------- 290
+D+WS G I ++ G P F +E I R + WP V+E K
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 291 ------------------DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
DL+ KML DP QR+TA++ LEH + +
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G +GV Y + N GE FA K I +K + +R E+ I+K L KH NIV L
Sbjct: 9 KIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL-KHSNIVKL 65
Query: 123 KDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
D + +V E + +L D V G A + + ++ + CH++ V+H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL--KRNYGP 237
RDLKP+N L + E LK DFGL+ F P ++ V + +Y AP+VL + Y
Sbjct: 124 RDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK------- 290
+D+WS G I ++ G P F +E I R + WP V+E K
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 291 ------------------DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
DL+ KML DP QR+TA++ LEH + +
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G G +GV Y + N GE FA K I +K + +R E+ I+K L KH NIV L
Sbjct: 9 KIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL-KHSNIVKL 65
Query: 123 KDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
D + +V E + +L D V G A + + ++ + CH++ V+H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL--KRNYGP 237
RDLKP+N L + E LK DFGL+ F P ++ + + +Y AP+VL + Y
Sbjct: 124 RDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAK------- 290
+D+WS G I ++ G P F +E I R + WP V+E K
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240
Query: 291 ------------------DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
DL+ KML DP QR+TA++ LEH + +
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 24/280 (8%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+DL R +GRG + L +A K + K+ + DI+ V+ E + + H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++ +S + V+E GG+L + + E A I + HE+
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 140
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK-RN 234
G+++RDLK +N L ++ +K D+G+ RPG+ + G+P Y+APE+L+ +
Sbjct: 141 GIIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 235 YGPEVDVWSAGVILYILLCGVPPF---------WAETEQGVAQAIIRSVIDFKRDPWPKV 285
YG VD W+ GV+++ ++ G PF TE + Q I+ I R +
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SM 253
Query: 286 SENAKDLVKKMLNPDPKQRLTA------EEVLEHPWLQNA 319
S A ++K LN DPK+RL ++ HP+ +N
Sbjct: 254 SVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNV 293
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 24/280 (8%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+DL R +GRG + L +A K + K+ + DI+ V+ E + + H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++ +S + V+E GG+L + + E A I + HE+
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 125
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK-RN 234
G+++RDLK +N L ++ +K D+G+ RPG+ + G+P Y+APE+L+ +
Sbjct: 126 GIIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 235 YGPEVDVWSAGVILYILLCGVPPF---------WAETEQGVAQAIIRSVIDFKRDPWPKV 285
YG VD W+ GV+++ ++ G PF TE + Q I+ I R +
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SL 238
Query: 286 SENAKDLVKKMLNPDPKQRLTAE------EVLEHPWLQNA 319
S A ++K LN DPK+RL ++ HP+ +N
Sbjct: 239 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 278
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 24/280 (8%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+DL R +GRG + L +A K + K+ + DI+ V+ E + + H
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++ +S + V+E GG+L + + E A I + HE+
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK-RN 234
G+++RDLK +N L ++ +K D+G+ RPG+ + G+P Y+APE+L+ +
Sbjct: 130 GIIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 235 YGPEVDVWSAGVILYILLCGVPPF---------WAETEQGVAQAIIRSVIDFKRDPWPKV 285
YG VD W+ GV+++ ++ G PF TE + Q I+ I R +
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SL 242
Query: 286 SENAKDLVKKMLNPDPKQRLTAE------EVLEHPWLQNA 319
S A ++K LN DPK+RL ++ HP+ +N
Sbjct: 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 24/280 (8%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+DL R +GRG + L +A + + K+ + DI+ V+ E + + H
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++ +S + V+E GG+L + + E A I + HE+
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK-RN 234
G+++RDLK +N L ++ +K D+G+ RPG+ + G+P Y+APE+L+ +
Sbjct: 173 GIIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 235 YGPEVDVWSAGVILYILLCGVPPF---------WAETEQGVAQAIIRSVIDFKRDPWPKV 285
YG VD W+ GV+++ ++ G PF TE + Q I+ I R +
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SL 285
Query: 286 SENAKDLVKKMLNPDPKQRLTAE------EVLEHPWLQNA 319
S A ++K LN DPK+RL ++ HP+ +N
Sbjct: 286 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 146/314 (46%), Gaps = 26/314 (8%)
Query: 53 DISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIED-----VRREV 107
+ S Y LG G FG + D ++ K I K+K+ IED V E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGG-ELFDRIVARGHYTERAAAAVMKTI 166
I+ + +H NI+ + D +E+ +VME G +LF I E A+ + + +
Sbjct: 81 AILSRV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 167 VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYM 226
V V + ++HRD+K EN + A E +K IDFG + + G+ F G+ Y
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYC 196
Query: 227 APEVLKRN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
APEVL N GPE+++WS GV LY L+ PF E E+ V AI P
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HPPYL 246
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVMN-- 342
VS+ LV +L P P++R T E+++ PW+ + + E + + V++
Sbjct: 247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAA 306
Query: 343 --KLKKRALQVVAE 354
++ R+L VA+
Sbjct: 307 SLEMGNRSLSDVAQ 320
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 42/293 (14%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY+L +G G V EK A K I+ +K +T++D ++ +E+Q M H
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--ELLKEIQAMSQC-HH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD---RIVARGHYT-----ERAAAAVMKTIVE 168
PNIVS ++ + +VM+L GG + D IVA+G + E A +++ ++E
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE------IVGS 222
++ H+ G +HRD+K N L E ++ DFG+S F G VG+
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 223 PYYMAPEVLK--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRD 280
P +MAPEV++ R Y + D+WS G+ L G P+ V ++ + D
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL------MLTLQND 243
Query: 281 PWPKVSENAKD-------------LVKKMLNPDPKQRLTAEEVLEHPWLQNAK 320
P P + +D ++ L DP++R TA E+L H + Q AK
Sbjct: 244 P-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 115 K-HPNIVSLKDTYE-DDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E DS V I+ + +LFD I RG E A + ++E V+
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 185
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 235
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 228
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 278
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 231
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 105 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 220
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 270
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 200
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 250
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 185
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 235
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 251
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 228
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 278
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 263
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 42/293 (14%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY+L +G G V EK A K I+ +K +T++D ++ +E+Q M H
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--ELLKEIQAMSQC-HH 67
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD---RIVARGHYT-----ERAAAAVMKTIVE 168
PNIVS ++ + +VM+L GG + D IVA+G + E A +++ ++E
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE------IVGS 222
++ H+ G +HRD+K N L E ++ DFG+S F G VG+
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 223 PYYMAPEVLK--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRD 280
P +MAPEV++ R Y + D+WS G+ L G P+ V ++ + D
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL------MLTLQND 238
Query: 281 PWPKVSENAKD-------------LVKKMLNPDPKQRLTAEEVLEHPWLQNAK 320
P P + +D ++ L DP++R TA E+L H + Q AK
Sbjct: 239 P-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 117
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 118 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 233
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 283
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 313
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 251
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 200
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 250
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 231
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 208
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 258
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 259 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 184
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 234
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 264
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E IIR + F++ +VS
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 251
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 252 QHLIRWCLALRPXDRPTFEEIQNHPWMQDV 281
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + V ++RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK------PVKKNKIKREIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
AE LS EE+ GLKE F+M+DT+ G I + E++++ LM+AAD+D
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 413 GSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV- 471
G+++YGEF+A +VHL K+ +E+L AFS+FD++ SG+I ++E++ A D +D+
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACK---DFGLDDIH 117
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFN 515
I+ ++ ++D D DG+I Y EFA MM+ R+ R+ N
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLN 161
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 140/260 (53%), Gaps = 14/260 (5%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+++G G FG L +G ++ K I+ ++ ++ + E+ RREV ++ ++ KHPNIV
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANM-KHPNIVQ 87
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVVQVCHEQGVM 179
++++E++ +++IVM+ CEGG+LF RI A+ + E I ++ H++ ++
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147
Query: 180 HRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-RNYGP 237
HRD+K +N +F K + L DFG++ V E +G+PYY++PE+ + + Y
Sbjct: 148 HRDIKSQN-IFLTKDGTVQLG--DFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWP-KVSENAKDLVKKM 296
+ D+W+ G +LY L F E G + ++ +I P S + + LV ++
Sbjct: 205 KSDIWALGCVLYELCTLKHAF----EAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL 260
Query: 297 LNPDPKQRLTAEEVLEHPWL 316
+P+ R + +LE ++
Sbjct: 261 FKRNPRDRPSVNSILEKGFI 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 20/274 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DYD+ + +GRG FG L + + +A K +SK ++ D E IM
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANS 134
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++DD +++VME GG+L + +++ E+ A +V + H
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF--NEIVGSPYYMAPEVLKRN 234
G++HRD+KP+N L + LK DFG + + VG+P Y++PEVLK
Sbjct: 194 GLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 235 -----YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII--RSVIDFKRDPWPKVSE 287
YG E D WS GV L+ +L G PF+A++ G I+ ++ + F D ++S+
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISK 308
Query: 288 NAKDLVKKMLNPDPKQRL---TAEEVLEHPWLQN 318
+AK+L+ L D + RL EE+ +HP+ +N
Sbjct: 309 HAKNLICAFLT-DREVRLGRNGVEEIKQHPFFKN 341
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++L + LG+G FG +L + FA K++ K + D+E E +++ +H
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 78
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + + T++ + VME GG+L I + + A I+ +Q H +
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEV-LKRN 234
G+++RDLK +N L + +K DFG+ G+ + NE G+P Y+APE+ L +
Sbjct: 139 GIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
Y VD WS GV+LY +L G PF + E+ + +I + R W + + AKDL+
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDLLV 251
Query: 295 KMLNPDPKQRLTAE-EVLEHP 314
K+ +P++RL ++ +HP
Sbjct: 252 KLFVREPEKRLGVRGDIRQHP 272
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 148/337 (43%), Gaps = 64/337 (18%)
Query: 53 DISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKK-----KLRTAVDIEDVRREV 107
+IS D+ L LG G +GV T GE A K I LRT RE+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-------REI 60
Query: 108 QIMKHLPKHPNIVSL-----KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAV 162
+I+KH KH NI+++ D++E+ + V+I+ EL + R+++ ++
Sbjct: 61 KILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYF 117
Query: 163 MKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF---------RPG 213
+ + V+V H V+HRDLKP N L + + LK DFGL+ G
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTG 174
Query: 214 EQ--FNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAE-------- 261
+Q E V + +Y APEV+ Y +DVWS G IL L P F
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 262 ----------------TEQGVAQAIIRSVIDFKRDP----WPKVSENAKDLVKKMLNPDP 301
E A+ I+S+ + P +P+V+ DL+++ML DP
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 302 KQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQF 338
+R+TA+E LEHP+LQ + GE + +F
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 148/337 (43%), Gaps = 64/337 (18%)
Query: 53 DISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKK-----KLRTAVDIEDVRREV 107
+IS D+ L LG G +GV T GE A K I LRT RE+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-------REI 60
Query: 108 QIMKHLPKHPNIVSL-----KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAV 162
+I+KH KH NI+++ D++E+ + V+I+ EL + R+++ ++
Sbjct: 61 KILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYF 117
Query: 163 MKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF---------RPG 213
+ + V+V H V+HRDLKP N L + + LK DFGL+ G
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTG 174
Query: 214 EQ--FNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAE-------- 261
+Q E V + +Y APEV+ Y +DVWS G IL L P F
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 262 ----------------TEQGVAQAIIRSVIDFKRDP----WPKVSENAKDLVKKMLNPDP 301
E A+ I+S+ + P +P+V+ DL+++ML DP
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 302 KQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQF 338
+R+TA+E LEHP+LQ + GE + +F
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSSEC 264
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSSEC 264
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSSEC 263
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSSEC 231
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSSEC 263
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSXEC 263
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSXEC 264
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLP 114
Y +G LG G FG Y V++ A K + K ++ ++ + R EV ++K +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 115 K-HPNIVSLKDTYEDDSAVHIVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
++ L D +E + +++E E +LFD I RG E A + ++E V+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 173 CHEQGVMHRDLKPENFLF-ANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
CH GV+HRD+K EN L N+ E LK IDFG + + + G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 232 K--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENA 289
+ R +G VWS G++LY ++CG PF + E Q R +VS
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----------RVSXEC 264
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ L++ L P R T EE+ HPW+Q+
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 148/337 (43%), Gaps = 64/337 (18%)
Query: 53 DISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKK-----KLRTAVDIEDVRREV 107
+IS D+ L LG G +GV T GE A K I LRT RE+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-------REI 60
Query: 108 QIMKHLPKHPNIVSL-----KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAV 162
+I+KH KH NI+++ D++E+ + V+I+ EL + R+++ ++
Sbjct: 61 KILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYF 117
Query: 163 MKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF---------RPG 213
+ + V+V H V+HRDLKP N L + + LK DFGL+ G
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTG 174
Query: 214 EQ--FNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAE-------- 261
+Q E V + +Y APEV+ Y +DVWS G IL L P F
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 262 ----------------TEQGVAQAIIRSVIDFKRDP----WPKVSENAKDLVKKMLNPDP 301
E A+ I+S+ + P +P+V+ DL+++ML DP
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 302 KQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQF 338
+R+TA+E LEHP+LQ + GE + +F
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 22/271 (8%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIED---VRREVQIMKHL 113
+Y LG LG+G FG + + + + A K I + ++ + D EV ++ +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 114 PK---HPNIVSLKDTYEDDSAVHIVME-LCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
HP ++ L D +E +V+E +LFD I +G E + +V
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+Q CH +GV+HRD+K EN L ++ + K IDFG E + + G+ Y PE
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLH-DEPYTDFDGTRVYSPPE 208
Query: 230 VLKRN--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSE 287
+ R+ + VWS G++LY ++CG PF + Q I+ + + F VS
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFPA----HVSP 258
Query: 288 NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+ L+++ L P P R + EE+L PW+Q
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 16/268 (5%)
Query: 46 LKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR 105
L+ G + ++ + +++GRG+F Y + +G A K + L A D +
Sbjct: 22 LRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK 81
Query: 106 EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKT 165
E+ ++K L HPN++ ++ +D+ ++IV+EL + G+L R++ H+ ++ +T
Sbjct: 82 EIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDL-SRMIK--HFKKQKRLIPERT 137
Query: 166 IVE-VVQVC------HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRP-GEQFN 217
+ + VQ+C H + VMHRD+KP N + +K D GL FF +
Sbjct: 138 VWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAH 194
Query: 218 EIVGSPYYMAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID 276
+VG+PYYM+PE + N Y + D+WS G +LY + PF+ + + D
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 277 FKRDPWPKVSENAKDLVKKMLNPDPKQR 304
+ P SE + LV +NPDP++R
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 51 GQDISID-YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQI 109
+D++ D +++ R +G+G FG + + + +A K ++K+K ++ +V +E+QI
Sbjct: 9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQI 68
Query: 110 MKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
M+ L +HP +V+L +++D+ + +V++L GG+L + H+ E + +V
Sbjct: 69 MQGL-EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA 127
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPE 229
+ Q ++HRD+KP+N L E + DF ++ Q + G+ YMAPE
Sbjct: 128 LDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPE 184
Query: 230 VLKRN----YGPEVDVWSAGVILYILLCGVPPFW---AETEQGVAQAIIRSVIDFKRDPW 282
+ Y VD WS GV Y LL G P+ + + + + +V+ + W
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP-SAW 243
Query: 283 PKVSENAKDLVKKMLNPDPKQRLTA-EEVLEHPWLQN 318
S+ L+KK+L P+P QR + +V P++ +
Sbjct: 244 ---SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 22/269 (8%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G +G+ Y D++N + A K I ++ R + + + E+ + KHL KH NIV
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 85
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHY-----TERAAAAVMKTIVEVVQVCHEQGV 178
++ ++ + I ME GG L + R + E+ K I+E ++ H+ +
Sbjct: 86 GSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE-IVGSPYYMAPEVL---KRN 234
+HRD+K +N L S LK DFG S E G+ YMAPE++ R
Sbjct: 144 VHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDP-WPK-VSENAKDL 292
YG D+WS G + + G PPF+ E G QA + V FK P P+ +S AK
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFY---ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
+ K PDP +R A ++L +L+ + K
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLKVSSK 287
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 139/278 (50%), Gaps = 20/278 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ + +GRG FG L + + +A K +SK ++ D E IM
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANS 133
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++DD +++VME GG+L + +++ E+ A +V + H
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGE-QFNEIVGSPYYMAPEVLKRN 234
G +HRD+KP+N L +S LK DFG + + G + + VG+P Y++PEVLK
Sbjct: 193 GFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 235 -----YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII--RSVIDFKRDPWPKVSE 287
YG E D WS GV LY +L G PF+A++ G I+ ++ + F D +S+
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISK 307
Query: 288 NAKDLVKKMLNPDPKQRL---TAEEVLEHPWLQNAKKA 322
AK+L+ L D + RL EE+ H + +N + A
Sbjct: 308 EAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 139/278 (50%), Gaps = 20/278 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ + +GRG FG L + + +A K +SK ++ D E IM
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANS 133
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++DD +++VME GG+L + +++ E+ A +V + H
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGE-QFNEIVGSPYYMAPEVLKRN 234
G +HRD+KP+N L +S LK DFG + + G + + VG+P Y++PEVLK
Sbjct: 193 GFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 235 -----YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII--RSVIDFKRDPWPKVSE 287
YG E D WS GV LY +L G PF+A++ G I+ ++ + F D +S+
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISK 307
Query: 288 NAKDLVKKMLNPDPKQRL---TAEEVLEHPWLQNAKKA 322
AK+L+ L D + RL EE+ H + +N + A
Sbjct: 308 EAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 139/278 (50%), Gaps = 20/278 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ + +GRG FG L + + +A K +SK ++ D E IM
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANS 128
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L ++DD +++VME GG+L + +++ E+ A +V + H
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 187
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGE-QFNEIVGSPYYMAPEVLKRN 234
G +HRD+KP+N L +S LK DFG + + G + + VG+P Y++PEVLK
Sbjct: 188 GFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 244
Query: 235 -----YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII--RSVIDFKRDPWPKVSE 287
YG E D WS GV LY +L G PF+A++ G I+ ++ + F D +S+
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISK 302
Query: 288 NAKDLVKKMLNPDPKQRL---TAEEVLEHPWLQNAKKA 322
AK+L+ L D + RL EE+ H + +N + A
Sbjct: 303 EAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWA 339
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 10/261 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ L + LG+G FG +L + FA K++ K + D+E E +++ +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + + T++ + VME GG+L I + + A I+ +Q H +
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEV-LKRN 234
G+++RDLK +N L + +K DFG+ G+ + N G+P Y+APE+ L +
Sbjct: 138 GIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
Y VD WS GV+LY +L G PF + E+ + +I + R W + + AKDL+
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDLLV 250
Query: 295 KMLNPDPKQRLTAE-EVLEHP 314
K+ +P++RL ++ +HP
Sbjct: 251 KLFVREPEKRLGVRGDIRQHP 271
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+D+ +LG G +G Y G+ A K + + D++++ +E+ IM+ P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQC-DSP 84
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH-YTERAAAAVMKTIVEVVQVCHEQ 176
++V +Y ++ + IVME C G + D I R TE A ++++ ++ ++ H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLKR-N 234
+HRD+K N L + + K DFG++ + N ++G+P++MAPEV++
Sbjct: 145 RKIHRDIKAGNILLNTEGHA---KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKV------SEN 288
Y D+WS G+ + G PP+ A+ +R++ +P P S+N
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPPY-ADIHP------MRAIFMIPTNPPPTFRKPELWSDN 254
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAK 320
D VK+ L P+QR TA ++L+HP++++AK
Sbjct: 255 FTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 128/265 (48%), Gaps = 22/265 (8%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G +G+ Y D++N + A K I ++ R + + + E+ + KHL KH NIV
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 71
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHY-----TERAAAAVMKTIVEVVQVCHEQGV 178
++ ++ + I ME GG L + R + E+ K I+E ++ H+ +
Sbjct: 72 GSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE-IVGSPYYMAPEVL---KRN 234
+HRD+K +N L S LK DFG S E G+ YMAPE++ R
Sbjct: 130 VHRDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDP-WPK-VSENAKDL 292
YG D+WS G + + G PPF+ E G QA + V FK P P+ +S AK
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFY---ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 244
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ K PDP +R A ++L +L+
Sbjct: 245 ILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 9/251 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ LG+G FG L E +A K + K + D+E E +++ L K
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + L ++ ++ VME GG+L I G + E A I + H++
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK-RN 234
G+++RDLK +N + ++ +K DFG+ G E G+P Y+APE++ +
Sbjct: 140 GIIYRDLKLDNVMLDSEGH---IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W+ GV+LY +L G PPF E E + Q+I+ + + + +S+ A + K
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICK 252
Query: 295 KMLNPDPKQRL 305
++ P +RL
Sbjct: 253 GLMTKHPAKRL 263
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
RE+G G FG Y DV N E A K +S ++ +D+ +EV+ ++ L +HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 79
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
+ Y + +VME C G V + E AAV ++ + H ++HR
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL----KRNYGP 237
D+K N L + E +K DFG + P N VG+PY+MAPEV+ + Y
Sbjct: 140 DVKAGNILLS---EPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRS-VIDFKRDPWPKVSENAKDLVKKM 296
+VDVWS G+ L PP + I ++ + W SE ++ V
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 250
Query: 297 LNPDPKQRLTAEEVLEH 313
L P+ R T+E +L+H
Sbjct: 251 LQKIPQDRPTSEVLLKH 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
RE+G G FG Y DV N E A K +S ++ +D+ +EV+ ++ L +HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 118
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHR 181
+ Y + +VME C G V + E AAV ++ + H ++HR
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 182 DLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL----KRNYGP 237
D+K N L + E +K DFG + P N VG+PY+MAPEV+ + Y
Sbjct: 179 DVKAGNILLS---EPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRS-VIDFKRDPWPKVSENAKDLVKKM 296
+VDVWS G+ L PP + I ++ + W SE ++ V
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 289
Query: 297 LNPDPKQRLTAEEVLEH 313
L P+ R T+E +L+H
Sbjct: 290 LQKIPQDRPTSEVLLKH 306
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ + +G+G FG L +A K + KK + + + + E ++ KH
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P +V L +++ ++ V++ GGELF + + E A I + H
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVL-KRN 234
+++RDLKPEN L ++ + DFGL + G+P Y+APEVL K+
Sbjct: 159 NIVYRDLKPENILLDSQGH---IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
Y VD W G +LY +L G+PPF++ + I+ + K P ++ +A+ L++
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLE 271
Query: 295 KMLNPDPKQRLTAEE 309
+L D +RL A++
Sbjct: 272 GLLQKDRTKRLGAKD 286
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 18/289 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ ELG G FG Y + A K I K + ++ED E+ I+ HP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHP 94
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVVQVCHE 175
NIV L D + ++ + I++E C GG + D ++ TE V K ++ + H+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVL--- 231
++HRDLK N LF + +K DFG+S R ++ + +G+PY+MAPEV+
Sbjct: 154 NKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 232 ---KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
R Y + DVWS G+ L + PP V I +S P + S N
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSN 269
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQ 337
KD +KK L + R T ++L+HP++ P L KA + +
Sbjct: 270 FKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTE 318
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 18/289 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ ELG G FG Y + A K I K + ++ED E+ I+ HP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHP 94
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVVQVCHE 175
NIV L D + ++ + I++E C GG + D ++ TE V K ++ + H+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVL--- 231
++HRDLK N LF + +K DFG+S R ++ + +G+PY+MAPEV+
Sbjct: 154 NKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 232 ---KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
R Y + DVWS G+ L + PP V I +S P + S N
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSN 269
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQ 337
KD +KK L + R T ++L+HP++ P L KA + +
Sbjct: 270 FKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTE 318
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 18/289 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ ELG G FG Y + A K I K + ++ED E+ I+ HP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHP 94
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVVQVCHE 175
NIV L D + ++ + I++E C GG + D ++ TE V K ++ + H+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVL--- 231
++HRDLK N LF + +K DFG+S R ++ + +G+PY+MAPEV+
Sbjct: 154 NKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 232 ---KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
R Y + DVWS G+ L + PP V I +S P + S N
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSN 269
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQ 337
KD +KK L + R T ++L+HP++ P L KA + +
Sbjct: 270 FKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTE 318
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 162/378 (42%), Gaps = 90/378 (23%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+L ++LG+G +G+ + D GE A K I + + D + RE+ I+ L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHE 69
Query: 118 NIVSLKDTY--EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAA-VMKTIVEVVQVCH 174
NIV+L + ++D V++V + E V R + E V+ +++V++ H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDL---HAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF---------------RPGEQFN-- 217
G++HRD+KP N L +K DFGLS F E F+
Sbjct: 127 SGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 218 -----EIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI 270
+ V + +Y APE+L Y +D+WS G IL +LCG P F + + I
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 271 IRSVIDF-------------------------------KRDPWPK-------------VS 286
I VIDF KRD + K +
Sbjct: 244 I-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWL---QNAKKAPN------VSLGETVKARLKQ 337
E A DL+ K+L +P +R++A + L+HP++ N + PN + + + VK +
Sbjct: 303 EEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKHSIDD 362
Query: 338 FS--VMNKLKKRALQVVA 353
+ V +++ +R ++++
Sbjct: 363 YRNLVYSEISRRKRELIS 380
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLXGG 86
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 144 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 201
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 202 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 261
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 262 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
Query: 319 AKKAPN 324
+ A N
Sbjct: 322 VRAAEN 327
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLXGG 85
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 261 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 319 AKKAPN 324
+ A N
Sbjct: 321 VRAAEN 326
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 53 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLXGG 106
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 163
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 164 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 221
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQ--------------GVAQAIIRSVIDF- 277
++Y +D+WS G + ++ PF+ + G+ + + I+
Sbjct: 222 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELD 281
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 282 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
Query: 319 AKKAPN 324
+ A N
Sbjct: 342 VRAAEN 347
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLXGG 85
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 261 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 319 AKKAPN 324
+ A N
Sbjct: 321 VRAAEN 326
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLXGG 85
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 261 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 319 AKKAPN 324
+ A N
Sbjct: 321 VRAAEN 326
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLCGG 86
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 144 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 201
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 202 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 261
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 262 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
Query: 319 AKKAPN 324
+ A N
Sbjct: 322 VRAAEN 327
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 34 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLCGG 87
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 144
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 145 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 202
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 203 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 262
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 263 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
Query: 319 AKKAPN 324
+ A N
Sbjct: 323 VRAAEN 328
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLMGG 85
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 261 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 319 AKKAPN 324
+ A N
Sbjct: 321 VRAAEN 326
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 15/252 (5%)
Query: 51 GQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIM 110
G+ I+ Y + +LG G YL D K A K+I ++ REV
Sbjct: 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 111 KHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV 170
L H NIVS+ D E+D ++VME EG L + I + G + A I++ +
Sbjct: 66 SQL-SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 171 QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE--QFNEIVGSPYYMAP 228
+ H+ ++HRD+KP+N L + K LK DFG++ Q N ++G+ Y +P
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 229 EVLKRNYGPE-VDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSE 287
E K E D++S G++LY +L G PPF ET +A I +D P V+
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-------IKHIQDSVPNVTT 234
Query: 288 NA-KDLVKKMLN 298
+ KD+ + + N
Sbjct: 235 DVRKDIPQSLSN 246
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLCGG 85
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 261 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 319 AKKAPN 324
+ A N
Sbjct: 321 VRAAEN 326
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 22/250 (8%)
Query: 78 VNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLPK-HPNIVSLKDTYEDDSAVH 133
V++ A K + K ++ ++ + R EV ++K + ++ L D +E +
Sbjct: 73 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 132
Query: 134 IVMELCEG-GELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLF-A 191
+++E E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L
Sbjct: 133 LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL 192
Query: 192 NKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK--RNYGPEVDVWSAGVILY 249
N+ E LK IDFG + + + G+ Y PE ++ R +G VWS G++LY
Sbjct: 193 NRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 248
Query: 250 ILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEE 309
++CG PF + E IIR + F++ +VS + L++ L P R T EE
Sbjct: 249 DMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEE 298
Query: 310 VLEHPWLQNA 319
+ HPW+Q+
Sbjct: 299 IQNHPWMQDV 308
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK A K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N L + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 19/271 (7%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEK---FACKSISKKKLRTAVDIEDVRREVQIMKHLP 114
++L + LG+G FG +L ++ + +A K + K L+ D + E I+ +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEV- 83
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
HP IV L ++ + ++++++ GG+LF R+ +TE + + + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVL-K 232
G+++RDLKPEN L E +K DFGLS E + G+ YMAPEV+ +
Sbjct: 144 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
R + D WS GV+++ +L G PF + + I+++ + + +S A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQSL 256
Query: 293 VKKMLNPDPKQRLTA-----EEVLEHPWLQN 318
++ + +P RL A EE+ H +
Sbjct: 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 19/271 (7%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEK---FACKSISKKKLRTAVDIEDVRREVQIMKHLP 114
++L + LG+G FG +L ++ + +A K + K L+ D + E I+ +
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEV- 84
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
HP IV L ++ + ++++++ GG+LF R+ +TE + + + H
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVL-K 232
G+++RDLKPEN L E +K DFGLS E + G+ YMAPEV+ +
Sbjct: 145 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
R + D WS GV+++ +L G PF + + I+++ + + +S A+ L
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQSL 257
Query: 293 VKKMLNPDPKQRLTA-----EEVLEHPWLQN 318
++ + +P RL A EE+ H +
Sbjct: 258 LRMLFKRNPANRLGAGPDGVEEIKRHSFFST 288
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 49/304 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY++ R++GRG++ + +VNN EK C K ++ ++RE++I+++L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEK--CIIKILKPVKKKK----IKREIKILQNLCGG 85
Query: 117 PNIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIV L D D + ++ E D V T+ + +++ + CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
QG+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID---------------- 276
++Y +D+WS G + ++ PF+ + I V+
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 277 ---------FKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R PW K VS A D + K+L D ++RLTA E + HP+ Q
Sbjct: 261 PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 319 AKKA 322
+ A
Sbjct: 321 VRAA 324
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 19/271 (7%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEK---FACKSISKKKLRTAVDIEDVRREVQIMKHLP 114
++L + LG+G FG +L ++ + +A K + K L+ D + E I+ +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEV- 83
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
HP IV L ++ + ++++++ GG+LF R+ +TE + + + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVL-K 232
G+++RDLKPEN L E +K DFGLS E + G+ YMAPEV+ +
Sbjct: 144 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
R + D WS GV+++ +L G PF + + I+++ + + +S A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQSL 256
Query: 293 VKKMLNPDPKQRLTA-----EEVLEHPWLQN 318
++ + +P RL A EE+ H +
Sbjct: 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 19/266 (7%)
Query: 58 YDLGRELGRGEFGVTYLCTDV---NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLP 114
++L + LG+G FG +L V ++G +A K + K L+ D + E I+ +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVR-DRVRTKMERDILADV- 87
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
HP +V L ++ + ++++++ GG+LF R+ +TE + + + H
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKR 233
G+++RDLKPEN L E +K DFGLS E + G+ YMAPEV+ R
Sbjct: 148 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 234 N-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
+ D WS GV+++ +L G PF + + I+++ + + +S A+ L
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSL 260
Query: 293 VKKMLNPDPKQRL-----TAEEVLEH 313
++ + +P RL AEE+ H
Sbjct: 261 LRALFKRNPANRLGSGPDGAEEIKRH 286
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 51/293 (17%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIED------VRREVQIMKHLPKH 116
++G G +GV Y D + G A K R +D ED RE+ ++K L H
Sbjct: 28 KVGEGTYGVVYKAKD-SQGRIVALK-------RIRLDAEDEGIPSTAIREISLLKEL-HH 78
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIVSL D + + +V E E ++ D + + + ++ V CH
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL-- 231
+ ++HRDLKP+N L + LK DFGL+ F P + V + +Y AP+VL
Sbjct: 137 QHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 232 KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII-------------------- 271
+ Y VD+WS G I ++ G P F T+ I
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 272 --RSVIDFKRDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R+ F++ PW P + DL+ ML DP +R++A + + HP+ ++
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 51/293 (17%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIED------VRREVQIMKHLPKH 116
++G G +GV Y D + G A K R +D ED RE+ ++K L H
Sbjct: 28 KVGEGTYGVVYKAKD-SQGRIVALK-------RIRLDAEDEGIPSTAIREISLLKEL-HH 78
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNIVSL D + + +V E E ++ D + + + ++ V CH
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL-- 231
+ ++HRDLKP+N L + LK DFGL+ F P + V + +Y AP+VL
Sbjct: 137 QHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 232 KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII-------------------- 271
+ Y VD+WS G I ++ G P F T+ I
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 272 --RSVIDFKRDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R+ F++ PW P + DL+ ML DP +R++A + + HP+ ++
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 39/296 (13%)
Query: 43 LCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIED 102
L L++P+G ++L +G G +G Y V G+ A K + T + E+
Sbjct: 16 LSALRDPAGI-----FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV----TGDEEEE 66
Query: 103 VRREVQIMKHLPKHPNIVSL------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYT- 155
+++E+ ++K H NI + K+ D + +VME C G + D I T
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 156 -ERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF-RPG 213
E A + + I+ + H+ V+HRD+K +N L E++ +K +DFG+S R
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTV 183
Query: 214 EQFNEIVGSPYYMAPEVLKRNYGPEV------DVWSAGVILYILLCGVPPFWAETEQGVA 267
+ N +G+PY+MAPEV+ + P+ D+WS G+ + G PP
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL-------CD 236
Query: 268 QAIIRSVIDFKRDPWPKV-----SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+R++ R+P P++ S+ + ++ L + QR E++++HP++++
Sbjct: 237 MHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 43/288 (14%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPNI 119
+G G +G+ C + + G + ++ KK + D + V+ RE++++K L +H N+
Sbjct: 33 VGEGSYGMVMKCRNKDTG-----RIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENL 86
Query: 120 VSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVM 179
V+L + + ++V E + L D + + + I+ + CH ++
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 180 HRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLKRN--YG 236
HRD+KPEN L + +S +K DFG + PGE +++ V + +Y APE+L + YG
Sbjct: 147 HRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETE--------QGVAQAIIRSVIDFKRDP------- 281
VDVW+ G ++ + G P F +++ + I R F ++P
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 282 ------------WPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+PK+SE DL KK L+ DP +R E+L H + Q
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ ELG G FG Y + G A K I K + ++ED E++I+ HP
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATC-DHP 76
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA---RGHYTERAAAAVMKTIVEVVQVCH 174
IV L Y D + I++E C GG + D I+ RG TE V + ++E + H
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLH 134
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVL-- 231
+ ++HRDLK N L + + ++ DFG+S + ++ + +G+PY+MAPEV+
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSE 287
Y + D+WS G+ L + PP V I +S P K S
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP-SKWSV 250
Query: 288 NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+D +K L+ +P+ R +A ++LEHP++ +
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 70
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL--K 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 129 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN-AKKAPNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305
Query: 327 L 327
L
Sbjct: 306 L 306
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL--K 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
Query: 327 L 327
L
Sbjct: 299 L 299
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + T + + +++Q CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
Query: 327 L 327
L
Sbjct: 300 L 300
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ ELG G FG Y + G A K I K + ++ED E++I+ HP
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATC-DHP 68
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA---RGHYTERAAAAVMKTIVEVVQVCH 174
IV L Y D + I++E C GG + D I+ RG TE V + ++E + H
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLH 126
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVL-- 231
+ ++HRDLK N L + + ++ DFG+S + ++ + +G+PY+MAPEV+
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSE 287
Y + D+WS G+ L + PP V I +S P K S
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP-SKWSV 242
Query: 288 NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+D +K L+ +P+ R +A ++LEHP++ +
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E +L D + A T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
Query: 327 L 327
L
Sbjct: 299 L 299
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
Query: 327 L 327
L
Sbjct: 298 L 298
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 65
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 HRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 179
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
Query: 327 L 327
L
Sbjct: 300 L 300
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ R T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--RQTLTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
Query: 327 L 327
L
Sbjct: 299 L 299
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
Query: 327 L 327
L
Sbjct: 299 L 299
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 12/261 (4%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
R LG+G FG C G+ +ACK + KK+++ E QI++ + +VS
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVS 248
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVVQVCHEQGVM 179
L YE A+ +V+ L GG+L I G + E A I ++ H + ++
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308
Query: 180 HRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNYGPE 238
+RDLKPEN L + ++ D GL+V G+ VG+ YMAPEV+K Y
Sbjct: 309 YRDLKPENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 239 VDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLN 298
D W+ G +LY ++ G PF ++ + + R V + + + S A+ L ++L
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 299 PDPKQRL-----TAEEVLEHP 314
DP +RL +A EV EHP
Sbjct: 426 KDPAERLGCRGGSAREVKEHP 446
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
Query: 327 L 327
L
Sbjct: 299 L 299
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
Query: 327 L 327
L
Sbjct: 298 L 298
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 67
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 126 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302
Query: 327 L 327
L
Sbjct: 303 L 303
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 39/309 (12%)
Query: 43 LCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIED 102
+ V PS I Y +LG G +G Y D E A K I + V
Sbjct: 22 MSVSAAPSATSID-RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA 80
Query: 103 VRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAV 162
+R EV ++K L +H NI+ LK + +H++ E E +L + + R +
Sbjct: 81 IR-EVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF 137
Query: 163 MKTIVEVVQVCHEQGVMHRDLKPENFLF--ANKKESSPLKAIDFGLS-VFFRPGEQFNEI 219
+ ++ V CH + +HRDLKP+N L ++ E+ LK DFGL+ F P QF
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE 197
Query: 220 VGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI-IRSVID 276
+ + +Y PE+L R+Y VD+WS I +L P F ++E + Q I V+
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE--IDQLFKIFEVLG 255
Query: 277 FKRD-PWPKVSE-----------NAKDLVK---------------KMLNPDPKQRLTAEE 309
D WP V+ K L + ML DP +R++A+
Sbjct: 256 LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKN 315
Query: 310 VLEHPWLQN 318
LEHP+ +
Sbjct: 316 ALEHPYFSH 324
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 70
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 129 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN-AKKAPNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305
Query: 327 L 327
L
Sbjct: 306 L 306
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + T + + +++Q CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 125 HRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
Query: 327 L 327
L
Sbjct: 300 L 300
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 43/299 (14%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 119 IVSLKDTYEDDSAVHIVME-LCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
IV L D ++ +++V E L + + F A + + +++ + CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK--RN 234
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 127 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS-------- 286
Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 287 -----------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVSL 327
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++ L
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL 302
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 12/261 (4%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
R LG+G FG C G+ +ACK + KK+++ E QI++ + +VS
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVS 248
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVVQVCHEQGVM 179
L YE A+ +V+ L GG+L I G + E A I ++ H + ++
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308
Query: 180 HRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RNYGPE 238
+RDLKPEN L + ++ D GL+V G+ VG+ YMAPEV+K Y
Sbjct: 309 YRDLKPENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 239 VDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLN 298
D W+ G +LY ++ G PF ++ + + R V + + + S A+ L ++L
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 299 PDPKQRL-----TAEEVLEHP 314
DP +RL +A EV EHP
Sbjct: 426 KDPAERLGCRGGSAREVKEHP 446
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
Query: 327 L 327
L
Sbjct: 298 L 298
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 125 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
Query: 327 L 327
L
Sbjct: 302 L 302
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
Query: 327 L 327
L
Sbjct: 299 L 299
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 65
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
Query: 327 L 327
L
Sbjct: 301 L 301
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 67
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 126 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 182
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302
Query: 327 L 327
L
Sbjct: 303 L 303
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 133/307 (43%), Gaps = 55/307 (17%)
Query: 50 SGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQI 109
+G+ I Y + +G G FGV + V + E K + K+ + RE+QI
Sbjct: 34 TGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN--------RELQI 85
Query: 110 MKHLPKHPNIVSLKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVM 163
M+ + KHPN+V LK + +D+ +++V+E E R A HY + M
Sbjct: 86 MR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYR--ASRHYAKLKQTMPM 140
Query: 164 KTI-------VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
I + + H G+ HRD+KP+N L S LK IDFG + GE
Sbjct: 141 LLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKILIAGEPN 198
Query: 217 NEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSV 274
+ S YY APE++ NY +D+WS G ++ L+ G P F E+ II+ +
Sbjct: 199 VSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVL 258
Query: 275 IDFKRD--------------------PW-----PKVSENAKDLVKKMLNPDPKQRLTAEE 309
R+ P+ P+ +A DL+ ++L P RLTA E
Sbjct: 259 GTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIE 318
Query: 310 VLEHPWL 316
L HP+
Sbjct: 319 ALCHPFF 325
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 26/273 (9%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
+S Y+LG LG G +L D+ + A K + R RRE Q L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 114 PKHPNIVSLKDTYEDDSAV----HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
HP IV++ DT E ++ +IVME +G L D + G T + A V+ +
Sbjct: 70 -NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPG----EQFNEIVGSPYY 225
+ H+ G++HRD+KP N L + ++ +K +DFG++ Q ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANILIS---ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 226 MAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
++PE + + DV+S G +LY +L G PPF ++ VA +R DP P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPP 239
Query: 285 ------VSENAKDLVKKMLNPDPKQRL-TAEEV 310
+S + +V K L +P+ R TA E+
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 65
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 125 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E +L D + A T + + +++Q CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 125 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
Query: 327 L 327
L
Sbjct: 302 L 302
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 132/294 (44%), Gaps = 46/294 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 65
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E +L D + A T + + +++Q CH
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + + T + + +++Q CH
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVD--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 125 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
Query: 327 L 327
L
Sbjct: 302 L 302
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 43/299 (14%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 119 IVSLKDTYEDDSAVHIVME-LCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
IV L D ++ +++V E + + + F A + + +++ + CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK--RN 234
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS-------- 286
Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 287 -----------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVSL 327
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++ L
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL 298
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 133/296 (44%), Gaps = 46/296 (15%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDV----RREVQIMKHL 113
Y+ ++G G +G + + E ++ K++R D E V RE+ ++K L
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKEL 58
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
KH NIV L D D + +V E C+ + FD G + + +++ +
Sbjct: 59 -KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLG 115
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEV 230
CH + V+HRDLKP+N L E LK DFGL+ F P ++ V + +Y P+V
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 231 L--KRNYGPEVDVWSAGVILYILLCGVPPFWAETE-QGVAQAIIR--------------S 273
L + Y +D+WSAG I L P + + + I R
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 274 VIDFKRDPW-----------PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+ D+K P PK++ +DL++ +L +P QR++AEE L+HP+ +
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 126/273 (46%), Gaps = 26/273 (9%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
+S Y+LG LG G +L D+ + A K + R RRE Q L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 114 PKHPNIVSLKDTYEDDSAV----HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
HP IV++ DT E ++ +IVME +G L D + G T + A V+ +
Sbjct: 70 -NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPG----EQFNEIVGSPYY 225
+ H+ G++HRD+KP N + + ++ +K +DFG++ Q ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 226 MAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
++PE + + DV+S G +LY +L G PPF ++ VA +R DP P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR------EDPIPP 239
Query: 285 ------VSENAKDLVKKMLNPDPKQRL-TAEEV 310
+S + +V K L +P+ R TA E+
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 43 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 96
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 153
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 154 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 211
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 271
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 272 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 331
Query: 319 AKK 321
K
Sbjct: 332 VVK 334
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 319 AKK 321
K
Sbjct: 327 VVK 329
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 133/296 (44%), Gaps = 46/296 (15%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDV----RREVQIMKHL 113
Y+ ++G G +G + + E ++ K++R D E V RE+ ++K L
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKEL 58
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
KH NIV L D D + +V E C+ + FD G + + +++ +
Sbjct: 59 -KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLG 115
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEV 230
CH + V+HRDLKP+N L E LK +FGL+ F P ++ V + +Y P+V
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 231 L--KRNYGPEVDVWSAGVILYILL-CGVPPFWAETEQGVAQAIIR--------------S 273
L + Y +D+WSAG I L G P F + I R
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 274 VIDFKRDPW-----------PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+ D+K P PK++ +DL++ +L +P QR++AEE L+HP+ +
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 90
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 147
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 148 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 325
Query: 319 AKK 321
K
Sbjct: 326 VVK 328
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 90
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 147
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 148 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 325
Query: 319 AKK 321
K
Sbjct: 326 VVK 328
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 89
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 146
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 147 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 204
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324
Query: 319 AKK 321
K
Sbjct: 325 VVK 327
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALK-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
E+ + L+ +ML+ DP +R++A+ L HP+ Q+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K+R + E V RE+ ++K L HPN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALX-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
Query: 327 L 327
L
Sbjct: 299 L 299
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 47/301 (15%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR----REVQIMKHLPKHPN 118
++G G +GV Y + GE A K+R + E V RE+ ++K L HPN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALX-----KIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ---VCHE 175
IV L D ++ +++V E + + + T + + +++Q CH
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVLK-- 232
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS------ 286
+ Y VD+WS G I ++ F ++E I R++ WP V+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 287 -------------------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK-APNVS 326
E+ + L+ +ML+ DP +R++A+ L HP+ Q+ K P++
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
Query: 327 L 327
L
Sbjct: 298 L 298
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 126/273 (46%), Gaps = 26/273 (9%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
+S Y+LG LG G +L D+ + A K + R RRE Q L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 114 PKHPNIVSLKDTYEDDSAV----HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
HP IV++ DT E ++ +IVME +G L D + G T + A V+ +
Sbjct: 70 -NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPG----EQFNEIVGSPYY 225
+ H+ G++HRD+KP N + + ++ +K +DFG++ Q ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 226 MAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
++PE + + DV+S G +LY +L G PPF ++ VA +R DP P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPP 239
Query: 285 ------VSENAKDLVKKMLNPDPKQRL-TAEEV 310
+S + +V K L +P+ R TA E+
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 20/254 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++ + +GRG FG + N + FA K ++K ++ + R E ++ +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDS 133
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAAVMKTIVEVVQVCHE 175
I +L ++DD+ +++VM+ GG+L + E A + +V + H+
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFG--LSVFFRPGEQFNEIVGSPYYMAPEVL-- 231
+HRD+KP+N L + ++ DFG L + Q + VG+P Y++PE+L
Sbjct: 194 LHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 232 ----KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK--- 284
K YGPE D WS GV +Y +L G PF+AE+ I+ F+ +P
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVT 307
Query: 285 -VSENAKDLVKKML 297
VSENAKDL+++++
Sbjct: 308 DVSENAKDLIRRLI 321
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 49/298 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N EK K + K + RE++I+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK------REIKILENLRGG 91
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
PNI++L D +D +V E + F ++ T+ M I++ + CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
G+MHRD+KP N + + E L+ ID+GL+ F+ PG+++N V S Y+ PE+L
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWA---ETEQGVAQAIIRSVIDF------------ 277
+ Y +D+WS G +L ++ PF+ +Q V A + D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 278 ----------KRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
R W + VS A D + K+L D + RLTA E +EHP+
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKF-ACKSISKKKLRTAVDIEDVRREVQIMKHLP-- 114
Y+ E+G G +G + D+ NG +F A K + + + + +R EV +++HL
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 115 KHPNIVSLKDT-----YEDDSAVHIVMELCEG--GELFDRIVARGHYTERAAAAVMKTIV 167
+HPN+V L D + ++ + +V E + D++ G TE +M ++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H V+HRDLKP+N L + S +K DFGL+ + +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 228 PEVL-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-- 284
PEVL + +Y VD+WS G I + P F ++ I+ + + WP+
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 285 ---------------------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKA 322
+ E KDL+ K L +P +R++A L HP+ Q+ ++
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKF-ACKSISKKKLRTAVDIEDVRREVQIMKHLP-- 114
Y+ E+G G +G + D+ NG +F A K + + + + +R EV +++HL
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 115 KHPNIVSLKDT-----YEDDSAVHIVMELCEG--GELFDRIVARGHYTERAAAAVMKTIV 167
+HPN+V L D + ++ + +V E + D++ G TE +M ++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H V+HRDLKP+N L + S +K DFGL+ + +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 228 PEVL-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-- 284
PEVL + +Y VD+WS G I + P F ++ I+ + + WP+
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 285 ---------------------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKA 322
+ E KDL+ K L +P +R++A L HP+ Q+ ++
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 19/267 (7%)
Query: 67 GEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLKDTY 126
G+FG Y + A K I K + ++ED E+ I+ HPNIV L D +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHPNIVKLLDAF 76
Query: 127 EDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVVQVCHEQGVMHRDLK 184
++ + I++E C GG + D ++ TE V K ++ + H+ ++HRDLK
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 185 PENFLFANKKESSPLKAIDFGLSV--FFRPGEQFNEIVGSPYYMAPEVL------KRNYG 236
N LF + +K DFG+S ++ + +G+PY+MAPEV+ R Y
Sbjct: 136 AGNILFTLDGD---IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKM 296
+ DVWS G+ L + PP V I +S P + S N KD +KK
Sbjct: 193 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKC 251
Query: 297 LNPDPKQRLTAEEVLEHPWLQNAKKAP 323
L + R T ++L+HP++ P
Sbjct: 252 LEKNVDARWTTSQLLQHPFVTVDSNKP 278
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 28/237 (11%)
Query: 100 IEDVRREVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERA 158
++ R E+ + L +H + I+ L D D +++VME C +L + +
Sbjct: 98 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE 156
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-- 216
+ K ++E V H+ G++H DLKP NFL + LK IDFG++ +P
Sbjct: 157 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVV 212
Query: 217 -NEIVGSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETE 263
+ VG+ YM PE +K R G P+ DVWS G ILY + G PF +
Sbjct: 213 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----Q 268
Query: 264 QGVAQ-AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
Q + Q + + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 54/297 (18%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSIS----KKKLRTAVDIEDVRREVQIMKHLPKHPN 118
+LG G + Y + G A K + + TA+ RE+ +MK L KH N
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI------REISLMKEL-KHEN 64
Query: 119 IVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMK----TIVEVVQV 172
IV L D ++ + +V E + +L + +R G+ ++K +++ +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 173 CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL 231
CHE ++HRDLKP+N L + + LK DFGL+ F P F+ V + +Y AP+VL
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVL 180
Query: 232 --KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSE-- 287
R Y +D+WS G IL ++ G P F ++ + I + WP V++
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240
Query: 288 ----------------------------NAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
N D + +L +P RL+A++ L HPW
Sbjct: 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 95
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 153
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 154 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 270
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 271 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 87
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 146 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 28/237 (11%)
Query: 100 IEDVRREVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERA 158
++ R E+ + L +H + I+ L D D +++VME C +L + +
Sbjct: 98 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE 156
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-- 216
+ K ++E V H+ G++H DLKP NFL + LK IDFG++ +P
Sbjct: 157 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVV 212
Query: 217 -NEIVGSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETE 263
+ VG+ YM PE +K R G P+ DVWS G ILY + G PF +
Sbjct: 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----Q 268
Query: 264 QGVAQ-AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
Q + Q + + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 89
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 148 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 264
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 265 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 91
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 28/237 (11%)
Query: 100 IEDVRREVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERA 158
++ R E+ + L +H + I+ L D D +++VME C +L + +
Sbjct: 51 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE 109
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-- 216
+ K ++E V H+ G++H DLKP NFL + LK IDFG++ +P
Sbjct: 110 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVV 165
Query: 217 -NEIVGSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETE 263
+ VG+ YM PE +K R G P+ DVWS G ILY + G PF +
Sbjct: 166 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----Q 221
Query: 264 QGVAQ-AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
Q + Q + + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 222 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ LG+G FG L E +A K + K + D+E E +++ K
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + L ++ ++ VME GG+L I G + E A I + +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK-RN 234
G+++RDLK +N + ++ +K DFG+ G G+P Y+APE++ +
Sbjct: 141 GIIYRDLKLDNVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W+ GV+LY +L G PF E E + Q+I+ + + + +S+ A + K
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICK 253
Query: 295 KMLNPDPKQRL 305
++ P +RL
Sbjct: 254 GLMTKHPGKRL 264
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 87
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 87
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARN 262
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 87
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 146 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARN 262
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ LG+G FG L E +A K + K + D+E E +++ K
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P + L ++ ++ VME GG+L I G + E A I + +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGSPYYMAPEVLK-RN 234
G+++RDLK +N + ++ +K DFG+ G G+P Y+APE++ +
Sbjct: 462 GIIYRDLKLDNVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVK 294
YG VD W+ GV+LY +L G PF E E + Q+I+ + + + +S+ A + K
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICK 574
Query: 295 KMLNPDPKQRL 305
++ P +RL
Sbjct: 575 GLMTKHPGKRL 585
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 92
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 151 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 267
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 268 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 93
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 151
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 152 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 268
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 269 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 84
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 142
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 143 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 259
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 260 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 91
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 150 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 46/291 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLAF-RHENIIGIN 89
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L +S LK DFGL+ P E V + +Y APE++
Sbjct: 148 LHRDLKPSNLLL---NTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 233 RNYGPEVDVWSAGVILYILLCGVP--------------------PFWAETEQGV---AQA 269
+ Y +D+WS G IL +L P P + G+ A+
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARN 264
Query: 270 IIRSVIDFKRDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ S+ + PW P A DL+ KML +P +R+ E+ L HP+L
Sbjct: 265 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 28/237 (11%)
Query: 100 IEDVRREVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERA 158
++ R E+ + L +H + I+ L D D +++VME C +L + +
Sbjct: 98 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE 156
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-- 216
+ K ++E V H+ G++H DLKP NFL + LK IDFG++ +P
Sbjct: 157 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVV 212
Query: 217 -NEIVGSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETE 263
+ VG+ YM PE +K R G P+ DVWS G ILY + G PF +
Sbjct: 213 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----Q 268
Query: 264 QGVAQ-AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
Q + Q + + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 126/292 (43%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 85
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 144 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPF---------------WAETEQGVAQAIIR----- 272
+ Y +D+WS G IL +L P F EQ II
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARN 260
Query: 273 ---SVIDFKRDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
S+ + PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 261 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 85
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 144 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 260
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 261 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYX--QRTLREIKILLRF-RHENIIGIN 91
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 150 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 55/321 (17%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N E+ K + K + REV+I+++L
Sbjct: 39 DYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIK------REVKILENLRGG 92
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
NI+ L DT +D +V E + F ++ T+ M +++ + CH
Sbjct: 93 TNIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMYELLKALDYCH 149
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
+G+MHRD+KP N + ++++ L+ ID+GL+ F+ P +++N V S Y+ PE+L
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDY 207
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVI----------------- 275
+ Y +D+WS G +L ++ PF+ + I V+
Sbjct: 208 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD 267
Query: 276 --------DFKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL-- 316
R W VS A DL+ K+L D +QRLTA+E +EHP+
Sbjct: 268 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYP 327
Query: 317 ----QNAKKAPNVSLGETVKA 333
Q+ A N L + A
Sbjct: 328 VVKEQSQPSADNAVLSSGLTA 348
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 107
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 166 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 282
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 283 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 107
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V++V L G +L+ +++ H + + I+ ++ H V
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 166 LHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 282
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 283 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 87
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 146 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 263 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 26/273 (9%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
+S Y+LG LG G +L D+ A K + R RRE Q L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 114 PKHPNIVSLKDTYEDDSAV----HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
HP IV++ DT E ++ +IVME +G L D + G T + A V+ +
Sbjct: 70 -NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPG----EQFNEIVGSPYY 225
+ H+ G++HRD+KP N + + ++ +K +DFG++ Q ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 226 MAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
++PE + + DV+S G +LY +L G PPF ++ VA +R DP P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPP 239
Query: 285 ------VSENAKDLVKKMLNPDPKQRL-TAEEV 310
+S + +V K L +P+ R TA E+
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 28/288 (9%)
Query: 39 VVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAV 98
+V R + PS +S Y+LG LG G +L D+ A K + R
Sbjct: 14 LVPRGSHMTTPS--HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPS 71
Query: 99 DIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAV----HIVMELCEGGELFDRIVARGHY 154
RRE Q L HP IV++ DT E ++ +IVME +G L D + G
Sbjct: 72 FYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 130
Query: 155 TERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPG- 213
T + A V+ + + H+ G++HRD+KP N + + ++ +K +DFG++
Sbjct: 131 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSG 187
Query: 214 ---EQFNEIVGSPYYMAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQA 269
Q ++G+ Y++PE + + DV+S G +LY +L G PPF ++ VA
Sbjct: 188 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
Query: 270 IIRSVIDFKRDPWPK------VSENAKDLVKKMLNPDPKQRL-TAEEV 310
+R DP P +S + +V K L +P+ R TA E+
Sbjct: 248 HVR------EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 39/294 (13%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKF-ACKSISKKKLRTAVDIEDVRREVQIMKHLP-- 114
Y+ E+G G +G + D+ NG +F A K + + + + +R EV +++HL
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 115 KHPNIVSLKDT-----YEDDSAVHIVMELCEG--GELFDRIVARGHYTERAAAAVMKTIV 167
+HPN+V L D + ++ + +V E + D++ G TE +M ++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ H V+HRDLKP+N L + S +K DFGL+ + +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 228 PEVL-KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK-- 284
PEVL + +Y VD+WS G I + P F ++ I+ + + WP+
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 285 ---------------------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ E KDL+ K L +P +R++A L HP+ Q
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 91
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 150 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 28/237 (11%)
Query: 100 IEDVRREVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERA 158
++ R E+ + L +H + I+ L D D +++VME C +L + +
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE 128
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-- 216
+ K ++E V H+ G++H DLKP NFL + LK IDFG++ +P
Sbjct: 129 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDXXXVV 184
Query: 217 -NEIVGSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETE 263
+ VG+ YM PE +K R G P+ DVWS G ILY + G PF +
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----Q 240
Query: 264 QGVAQ-AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
Q + Q + + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 92
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 151 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 267
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 268 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 49/298 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
DY L R+LGRG++ + ++ N E+ K + K + REV+I+++L
Sbjct: 44 DYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIK------REVKILENLRGG 97
Query: 117 PNIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH 174
NI+ L DT +D +V E + F ++ T+ M +++ + CH
Sbjct: 98 TNIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMYELLKALDYCH 154
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--K 232
+G+MHRD+KP N + ++++ L+ ID+GL+ F+ P +++N V S Y+ PE+L
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDY 212
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVI----------------- 275
+ Y +D+WS G +L ++ PF+ + I V+
Sbjct: 213 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD 272
Query: 276 --------DFKRDPWPK---------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
R W VS A DL+ K+L D +QRLTA+E +EHP+
Sbjct: 273 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 28/237 (11%)
Query: 100 IEDVRREVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERA 158
++ R E+ + L +H + I+ L D D +++VME C +L + +
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE 128
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-- 216
+ K ++E V H+ G++H DLKP NFL + LK IDFG++ +P
Sbjct: 129 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVV 184
Query: 217 -NEIVGSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETE 263
+ VG+ YM PE +K R G P+ DVWS G ILY + G PF +
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----Q 240
Query: 264 QGVAQ-AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
Q + Q + + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 35/292 (11%)
Query: 49 PSGQDISID---YDLGRELGRGEFGVTYLCTDVNNGEK-FACKSISKKKLRTAVDIEDVR 104
P+ + IS+ Y + +++G G G + + +N ++ +A K ++ ++ ++ R
Sbjct: 2 PANECISVKGRIYSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYR 58
Query: 105 REVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVM 163
E+ + L +H + I+ L D D +++VME C +L + + +
Sbjct: 59 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYW 117
Query: 164 KTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF---NEIV 220
K ++E V H+ G++H DLKP NFL + LK IDFG++ +P + V
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQV 173
Query: 221 GSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETEQGVAQ 268
G+ YM PE +K R G P+ DVWS G ILY + G PF +Q + Q
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQ 229
Query: 269 -AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 230 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 91
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 150 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A + IS + +T + RE++I+ +H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYC--QRTLREIKILLRF-RHENIIGIN 91
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 150 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
+ PW P A DL+ KML +P +R+ E+ L HP+L+
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 132/264 (50%), Gaps = 13/264 (4%)
Query: 48 EPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
+P G+D +D+ R LGRG FG + C G+ +ACK ++KK+L+ + E
Sbjct: 180 QPMGEDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA----RGHYTERAAAAVM 163
+I+ + IVSL +E + + +VM + GG++ I + E A
Sbjct: 237 KILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 164 KTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE-IVGS 222
IV ++ H++ +++RDLKPEN L + ++ D GL+V + G+ + G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 223 PYYMAPE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDP 281
P +MAPE +L Y VD ++ GV LY ++ PF A E+ + + + V++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 282 WPKVSENAKDLVKKMLNPDPKQRL 305
K S +KD + +L DP++RL
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 35/359 (9%)
Query: 48 EPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
+P G+D +D+ R LGRG FG + C G+ +ACK ++KK+L+ + E
Sbjct: 180 QPMGEDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA----RGHYTERAAAAVM 163
+I+ + IVSL +E + + +VM + GG++ I + E A
Sbjct: 237 KILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 164 KTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGS 222
IV ++ H++ +++RDLKPEN L + ++ D GL+V + G+ + G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 223 PYYMAPE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDP 281
P +MAPE +L Y VD ++ GV LY ++ PF A E+ + + + V++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 282 WPKVSENAKDLVKKMLNPDPKQRL-----TAEEVLEHP------WLQ---NAKKAPNVSL 327
K S +KD + +L DP++RL + + + HP W Q P V
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPD 472
Query: 328 GETVKARLKQ----FSVMN--KLKKRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKIN 380
TV A+ Q FS + +K + EF S +E EM++T G +N
Sbjct: 473 SRTVYAKCIQDVGAFSTVKGVAFEKADTEFFQEFASGTCPIPWQE--EMIETGVFGDLN 529
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G+ D N + A K IS + +T + RE++I+ +H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC--QRTLREIKILLAF-RHENIIGIN 89
Query: 124 D-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGV 178
D T E V+IV +L E +L+ +++ H + + I+ ++ H V
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSPYYMAPEVL--K 232
+HRDLKP N L + LK DFGL+ P E V + +Y APE++
Sbjct: 148 LHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 233 RNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QGV----AQAIIRSVIDFK--- 278
+ Y +D+WS G IL +L P F + G+ +Q + +I+ K
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 264
Query: 279 ---------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ PW P A DL+ KML +P +R+ E+ L HP+L
Sbjct: 265 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 132/264 (50%), Gaps = 13/264 (4%)
Query: 48 EPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
+P G+D +D+ R LGRG FG + C G+ +ACK ++KK+L+ + E
Sbjct: 180 QPMGEDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA----RGHYTERAAAAVM 163
+I+ + IVSL +E + + +VM + GG++ I + E A
Sbjct: 237 KILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 164 KTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGS 222
IV ++ H++ +++RDLKPEN L + ++ D GL+V + G+ + G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 223 PYYMAPE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDP 281
P +MAPE +L Y VD ++ GV LY ++ PF A E+ + + + V++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 282 WPKVSENAKDLVKKMLNPDPKQRL 305
K S +KD + +L DP++RL
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 28/237 (11%)
Query: 100 IEDVRREVQIMKHLPKHPN-IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERA 158
++ R E+ + L +H + I+ L D D +++VME C +L + +
Sbjct: 50 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE 108
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF-- 216
+ K ++E V H+ G++H DLKP NFL + LK IDFG++ +P
Sbjct: 109 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVV 164
Query: 217 -NEIVGSPYYMAPEVLK-----RNYG-------PEVDVWSAGVILYILLCGVPPFWAETE 263
+ VG+ YM PE +K R G P+ DVWS G ILY + G PF +
Sbjct: 165 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----Q 220
Query: 264 QGVAQ-AIIRSVIDFKRD-PWPKVSE-NAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
Q + Q + + ++ID + +P + E + +D++K L DPKQR++ E+L HP++Q
Sbjct: 221 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 132/264 (50%), Gaps = 13/264 (4%)
Query: 48 EPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
+P G+D +D+ R LGRG FG + C G+ +ACK ++KK+L+ + E
Sbjct: 180 QPMGEDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA----RGHYTERAAAAVM 163
+I+ + IVSL +E + + +VM + GG++ I + E A
Sbjct: 237 KILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 164 KTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGS 222
IV ++ H++ +++RDLKPEN L + ++ D GL+V + G+ + G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 223 PYYMAPE-VLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDP 281
P +MAPE +L Y VD ++ GV LY ++ PF A E+ + + + V++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 282 WPKVSENAKDLVKKMLNPDPKQRL 305
K S +KD + +L DP++RL
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRL 436
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 50/342 (14%)
Query: 18 GKKEKPNPFYGDEYVVANGSTVVHRLCVLKEPSGQ---DISIDYDLGRELGRGEFGVTYL 74
G E P P + A S L +LK S D+ +Y++ +G G +GV
Sbjct: 14 GSAEPPGPVKAEPAHTA-ASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSS 72
Query: 75 CTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLKDT------YED 128
G++ A K I + + RE++I+KH KH NI+++KD Y +
Sbjct: 73 ARRRLTGQQVAIKKIPNA-FDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGE 130
Query: 129 DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENF 188
+V++V++L E +L I + T + ++ ++ H V+HRDLKP N
Sbjct: 131 FKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 189
Query: 189 LFANKKESSPLKAIDFGLS--VFFRPGEQ---FNEIVGSPYYMAPEVLK--RNYGPEVDV 241
L E+ LK DFG++ + P E E V + +Y APE++ Y +D+
Sbjct: 190 LV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 246
Query: 242 WSAGVI---------------------LYILLCGVPPFWAETEQGV--AQAIIRSVIDFK 278
WS G I L +++ G P G +A I+S+ +
Sbjct: 247 WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQ 306
Query: 279 RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
PW P A L+ +ML +P R++A L HP+L
Sbjct: 307 PVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 50/342 (14%)
Query: 18 GKKEKPNPFYGDEYVVANGSTVVHRLCVLKEPSGQ---DISIDYDLGRELGRGEFGVTYL 74
G E P P + A S L +LK S D+ +Y++ +G G +GV
Sbjct: 15 GSAEPPGPVKAEPAHTA-ASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSS 73
Query: 75 CTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLKDT------YED 128
G++ A K I + + RE++I+KH KH NI+++KD Y +
Sbjct: 74 ARRRLTGQQVAIKKIPNA-FDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGE 131
Query: 129 DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENF 188
+V++V++L E +L I + T + ++ ++ H V+HRDLKP N
Sbjct: 132 FKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 190
Query: 189 LFANKKESSPLKAIDFGLS--VFFRPGEQ---FNEIVGSPYYMAPEVLK--RNYGPEVDV 241
L E+ LK DFG++ + P E E V + +Y APE++ Y +D+
Sbjct: 191 LV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 247
Query: 242 WSAGVI---------------------LYILLCGVPPFWAETEQGV--AQAIIRSVIDFK 278
WS G I L +++ G P G +A I+S+ +
Sbjct: 248 WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQ 307
Query: 279 RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
PW P A L+ +ML +P R++A L HP+L
Sbjct: 308 PVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 45/289 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D +GEK A K +S+ ++ + + RE+ ++KH+ +H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHM-QHENVIGLL 107
Query: 124 DTYEDDSAV------HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + S++ ++VM + +I+ ++E ++ +++ ++ H G
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLKYIHSAG 164
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
V+HRDLKP N L N E LK +DFGL+ + V + +Y APEV+ +Y
Sbjct: 165 VVHRDLKPGN-LAVN--EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMHY 219
Query: 236 GPEVDVWSAGVILYILLCG---------------------VP--PFWAETEQGVAQAIIR 272
VD+WS G I+ +L G VP F + A++ I+
Sbjct: 220 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ 279
Query: 273 SVIDFKRDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
S+ R + P+ S A DL++KML D +RLTA + L HP+ +
Sbjct: 280 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 48/296 (16%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y +G G +G DV +G K A K +S+ ++ + + RE++++KH+ KH
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHE 110
Query: 118 NIVSLKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
N++ L D + E+ + V++V L G +L + IV T+ ++ I+ ++
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL 231
H ++HRDLKP N E LK +DFGL+ ++ V + +Y APE++
Sbjct: 169 YIHSADIIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIM 223
Query: 232 KR--NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIR-------SVIDFKRDP- 281
+Y VD+WS G I+ LL G F Q I+R SVI R P
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVI--SRMPS 281
Query: 282 ---------WPKVSEN------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
P++ + A DL++KML D +R+TA E L HP+
Sbjct: 282 HEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 45/289 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D +GEK A K +S+ ++ + + RE+ ++KH+ +H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHM-QHENVIGLL 89
Query: 124 DTYEDDSAV------HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + S++ ++VM + +I+ ++E ++ +++ ++ H G
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAG 146
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
V+HRDLKP N L N E LK +DFGL+ + V + +Y APEV+ +Y
Sbjct: 147 VVHRDLKPGN-LAVN--EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMHY 201
Query: 236 GPEVDVWSAGVILYILLCG---------------------VP--PFWAETEQGVAQAIIR 272
VD+WS G I+ +L G VP F + A++ I+
Sbjct: 202 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ 261
Query: 273 SVIDFKRDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
S+ R + P+ S A DL++KML D +RLTA + L HP+ +
Sbjct: 262 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 46/304 (15%)
Query: 53 DISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
D+ Y + +G G +G+ D + A K IS + +T + RE+QI+
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYC--QRTLREIQILLR 97
Query: 113 LPKHPNIVSLKD-----TYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIV 167
+H N++ ++D T E V+IV +L E +L+ +++ + + I+
Sbjct: 98 F-RHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYFLYQIL 154
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ----FNEIVGSP 223
++ H V+HRDLKP N L + LK DFGL+ P E V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 224 YYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAE--TEQ-----GV----AQAI 270
+Y APE++ + Y +D+WS G IL +L P F + +Q G+ +Q
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 271 IRSVIDFK------------RDPW----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHP 314
+ +I+ K + W PK A DL+ +ML +P +R+T EE L HP
Sbjct: 272 LNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHP 331
Query: 315 WLQN 318
+L+
Sbjct: 332 YLEQ 335
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 37/286 (12%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVD--IEDVRREVQIMKHLPKHPNIVS 121
LG G+F Y D N + A K I A D RE+++++ L HPNI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIG 76
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRIVARGHY--TERAAAAVMKTIVEVVQVCHEQGVM 179
L D + S + +V + E + I+ T A M ++ ++ H+ ++
Sbjct: 77 LLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134
Query: 180 HRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGSPYYMAPEVL--KRNYG 236
HRDLKP N L E+ LK DFGL+ F P + V + +Y APE+L R YG
Sbjct: 135 HRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKV----------- 285
VD+W+ G IL LL VP +++ I ++ + WP +
Sbjct: 192 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 251
Query: 286 -------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
++ DL++ + +P R+TA + L+ + N
Sbjct: 252 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 22/277 (7%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIE-DVRREVQIMKHLPKH 116
Y +G LG G +G D + A K + KKKLR + E +V++E+Q+++ L +H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RH 65
Query: 117 PNIVSLKDTY--EDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
N++ L D E+ +++VME C G E+ D + + + A +++ ++
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEY 124
Query: 173 CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRP---GEQFNEIVGSPYYMAPE 229
H QG++H+D+KP N L LK G++ P + GSP + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 230 V---LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS 286
+ L G +VD+WSAGV LY + G+ PF + + + I + D P +S
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
DL+K ML +P +R + ++ +H W + KK P
Sbjct: 242 ----DLLKGMLEYEPAKRFSIRQIRQHSWFR--KKHP 272
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 26/273 (9%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
+S Y+LG LG G +L D+ A K + R RRE Q L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 114 PKHPNIVSLKDTYEDDSAV----HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
HP IV++ T E ++ +IVME +G L D + G T + A V+ +
Sbjct: 70 -NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPG----EQFNEIVGSPYY 225
+ H+ G++HRD+KP N + + ++ +K +DFG++ Q ++G+ Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 226 MAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
++PE + + DV+S G +LY +L G PPF ++ VA +R DP P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPP 239
Query: 285 ------VSENAKDLVKKMLNPDPKQRL-TAEEV 310
+S + +V K L +P+ R TA E+
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ LG G FG + GE+ A K ++ + + E E+QIMK L HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHP 73
Query: 118 NIVSLKDTYEDDSAVH------IVMELCEGGEL---FDRIVARGHYTERAAAAVMKTIVE 168
N+VS ++ + + + ME CEGG+L ++ E ++ I
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAP 228
++ HE ++HRDLKPEN + + K ID G + GE E VG+ Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 229 EVL-KRNYGPEVDVWSAGVILYILLCGVPPF 258
E+L ++ Y VD WS G + + + G PF
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+++ LG G FG + GE+ A K ++ + + E E+QIMK L HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHP 72
Query: 118 NIVSLKDTYEDDSAVH------IVMELCEGGEL---FDRIVARGHYTERAAAAVMKTIVE 168
N+VS ++ + + + ME CEGG+L ++ E ++ I
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAP 228
++ HE ++HRDLKPEN + + K ID G + GE E VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 229 EVL-KRNYGPEVDVWSAGVILYILLCGVPPF 258
E+L ++ Y VD WS G + + + G PF
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 155/370 (41%), Gaps = 62/370 (16%)
Query: 2 GNCCARPDSSSGKRAKGKKEKPNPFYGDEYVV--ANGSTVVHRLCVLKEPSGQDISIDYD 59
G RP ++S + ++P+ F G V +GS V + + + + Y
Sbjct: 1 GPMSGRPRTTSFAESCKPVQQPSAF-GSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYT 59
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
+ +G G FGV Y ++GE A K + ++D R RE+QIM+ L H
Sbjct: 60 DTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKL-DH 108
Query: 117 PNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV 172
NIV L+ + E V++ + L E R VAR + + V+ + + Q+
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQL 167
Query: 173 ------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYM 226
H G+ HRD+KP+N L +++ LK DFG + GE + S YY
Sbjct: 168 FRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 225
Query: 227 APEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI-------------I 271
APE++ +Y +DVWSAG +L LL G P F ++ GV Q + I
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQI 283
Query: 272 RSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
R + K PW P+ A L ++L P RLT E H +
Sbjct: 284 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 343
Query: 318 NAKKAPNVSL 327
+ PNV L
Sbjct: 344 ELRD-PNVKL 352
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
R +G G +G D +K A K +S+ ++ + RE++++KHL KH N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L D + ED S V++V L G + IV ++ ++ ++ ++ H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR-- 233
G++HRDLKP N E S L+ +DFGL+ + E+ V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 234 NYGPEVDVWSAGVILYILLCG-----------------------VPPFWAETEQGVAQAI 270
+Y VD+WS G I+ LL G P A+ A+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 271 IRSVIDFKRDPWPKVSENAK----DLVKKMLNPDPKQRLTAEEVLEHPWL 316
I+S+ + + A DL+ +ML D QR++A E L H +
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 154/366 (42%), Gaps = 62/366 (16%)
Query: 6 ARPDSSSGKRAKGKKEKPNPFYGDEYVV--ANGSTVVHRLCVLKEPSGQDISIDYDLGRE 63
RP ++S + ++P+ F G V +GS V + + + + Y +
Sbjct: 3 GRPRTTSFAESCKPVQQPSAF-GSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV 61
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKHPNIV 120
+G G FGV Y ++GE A K + ++D R RE+QIM+ L H NIV
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIV 110
Query: 121 SLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV---- 172
L+ + E V++ + L E R VAR + + V+ + + Q+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 173 --CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
H G+ HRD+KP+N L +++ LK DFG + GE + S YY APE+
Sbjct: 170 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
Query: 231 L--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI-------------IRSV- 274
+ +Y +DVWSAG +L LL G P F ++ GV Q + IR +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMN 285
Query: 275 --------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
K PW P+ A L ++L P RLT E H + +
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345
Query: 322 APNVSL 327
PNV L
Sbjct: 346 -PNVKL 350
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 339 SVMNKLKKRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEA 398
+VM K K + + + L+ E++A KEAF + D + G I QN EA
Sbjct: 280 AVMQK-KTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 338
Query: 399 DLQILMEAADVDGDGSLNYGEF-VAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELR 457
+LQ ++ D DGDG++++ EF + ++ +K ++E + +AF FD++ +G+I ELR
Sbjct: 339 ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 398
Query: 458 NALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
+ + + + ++ ++ ++ + D D DG+++YEEF MM A
Sbjct: 399 HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 154/366 (42%), Gaps = 62/366 (16%)
Query: 6 ARPDSSSGKRAKGKKEKPNPFYGDEYVV--ANGSTVVHRLCVLKEPSGQDISIDYDLGRE 63
RP ++S + ++P+ F G V +GS V + + + + Y +
Sbjct: 3 GRPRTTSFAESCKPVQQPSAF-GSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV 61
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKHPNIV 120
+G G FGV Y ++GE A K + ++D R RE+QIM+ L H NIV
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIV 110
Query: 121 SLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQV---- 172
L+ + E V++ + L E R VAR + + V+ + + Q+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 173 --CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV 230
H G+ HRD+KP+N L +++ LK DFG + GE + S YY APE+
Sbjct: 170 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
Query: 231 L--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI-------------IRSV- 274
+ +Y +DVWSAG +L LL G P F ++ GV Q + IR +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMN 285
Query: 275 --------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
K PW P+ A L ++L P RLT E H + +
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345
Query: 322 APNVSL 327
PNV L
Sbjct: 346 -PNVKL 350
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 155/368 (42%), Gaps = 66/368 (17%)
Query: 6 ARPDSSSGKRAKGKKEKPNPFYGDEYVV--ANGSTVVHRLCVLKEPSGQDISIDYDLGRE 63
RP ++S + ++P+ F G V +GS V + + + + Y +
Sbjct: 48 GRPRTTSFAESCKPVQQPSAF-GSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV 106
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKHPNIV 120
+G G FGV Y ++GE A K + ++D R RE+QIM+ L H NIV
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIV 155
Query: 121 SLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAV--------MKTIVE 168
L+ + E V++ + L E R VAR HY+ RA + M +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VAR-HYS-RAKQTLPVIYVKLYMYQLFR 212
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAP 228
+ H G+ HRD+KP+N L +++ LK DFG + GE + S YY AP
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 270
Query: 229 EVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI-------------IRS 273
E++ +Y +DVWSAG +L LL G P F ++ GV Q + IR
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIRE 328
Query: 274 V---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+ K PW P+ A L ++L P RLT E H +
Sbjct: 329 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 388
Query: 320 KKAPNVSL 327
+ PNV L
Sbjct: 389 RD-PNVKL 395
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 74
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 75 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 132
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 248
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 249 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 308
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 309 SFFDELRD-PNVKL 321
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 97
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 98 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 155
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 271
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 272 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 331
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 332 SFFDELRD-PNVKL 344
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 81
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 82 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 139
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 255
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 256 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 316 SFFDELRD-PNVKL 328
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 81
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 82 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 139
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 255
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 256 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 316 SFFDELRD-PNVKL 328
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 82
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 83 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 140
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 141 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 256
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 257 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 316
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 317 SFFDELRD-PNVKL 329
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 107
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 108 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 165
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 281
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 282 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 341
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 342 SFFDELRD-PNVKL 354
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
R +G G +G D +K A K +S+ ++ + RE++++KHL KH N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L D + ED S V++V L G + IV ++ ++ ++ ++ H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR-- 233
G++HRDLKP N E S L+ +DFGL+ + E+ V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 234 NYGPEVDVWSAGVILYILLCG-----------------------VPPFWAETEQGVAQAI 270
+Y VD+WS G I+ LL G P A+ A+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 271 IRSVIDFKRDPWPKVSENAK----DLVKKMLNPDPKQRLTAEEVLEHPWL 316
I+S+ + + A DL+ +ML D QR++A E L H +
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 77
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 78 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 135
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 136 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 251
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 252 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 311
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 312 SFFDELRD-PNVKL 324
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 133/321 (41%), Gaps = 69/321 (21%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLP 114
+ + R G+G FG L + + G A K + I+D R RE+QIM+ L
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----------IQDPRFRNRELQIMQDLA 74
Query: 115 --KHPNIVSLKDTY-------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKT 165
HPNIV L+ + D +++VME + R R +Y + A +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHR-CCRNYYRRQVAPPPILI 131
Query: 166 IVEVVQVCHEQG--------VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFN 217
V + Q+ G V HRD+KP N L N+ + + LK DFG + P E
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL-VNEADGT-LKLCDFGSAKKLSPSEPNV 189
Query: 218 EIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIR--- 272
+ S YY APE++ ++Y VD+WS G I ++ G P F + G I+R
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249
Query: 273 -----------------SVIDFKRDPWPKV--------SENAKDLVKKMLNPDPKQRLTA 307
+ + K PW V ++ A DL+ +L P++R+
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309
Query: 308 EEVLEHPWLQN----AKKAPN 324
E L HP+ A K PN
Sbjct: 310 YEALCHPYFDELHDPATKLPN 330
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 69
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 70 L-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 127
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 243
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 304 SFFDELRD-PNVKL 316
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 21/267 (7%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G+G FG + D + A K I ++ + ED+++E+ ++ P +
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQC-DSPYVTKY 90
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+Y D+ + I+ME GG D ++ G E A +++ I++ + H + +HRD
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 183 LKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-YGPEVD 240
+K N L + E +K DFG++ + + N VG+P++MAPEV+K++ Y + D
Sbjct: 150 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 206
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN----AKDLVKKM 296
+WS G+ L G PP V I K +P P + N K+ V+
Sbjct: 207 IWSLGITAIELARGEPPHSELHPMKVLFLIP------KNNP-PTLEGNYSKPLKEFVEAC 259
Query: 297 LNPDPKQRLTAEEVLEHPW-LQNAKKA 322
LN +P R TA+E+L+H + L+NAKK
Sbjct: 260 LNKEPSFRPTAKELLKHKFILRNAKKT 286
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 88
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 89 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 146
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 147 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 262
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 263 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 322
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 323 SFFDELRD-PNVKL 335
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
+ Y + +G G FGV Y ++GE A K + + K RE+QIM+ L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKL-D 71
Query: 116 HPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
H NIV L+ + E V++ + L E R VAR + + V+ + + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQ 130
Query: 172 V------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYY 225
+ H G+ HRD+KP+N L +++ LK DFG + GE + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 226 MAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI------------- 270
APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQ 246
Query: 271 IR---------SVIDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
IR + K PW P+ A L ++L P RLT E H +
Sbjct: 247 IREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 317 QNAKKAPNVSL 327
+ PNV L
Sbjct: 307 DELRD-PNVKL 316
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 134/267 (50%), Gaps = 21/267 (7%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G+G FG + D + A K I ++ + ED+++E+ ++ P +
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQC-DSPYVTKY 85
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+Y D+ + I+ME GG D ++ G E A +++ I++ + H + +HRD
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 183 LKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-YGPEVD 240
+K N L + E +K DFG++ + + N VG+P++MAPEV+K++ Y + D
Sbjct: 145 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN----AKDLVKKM 296
+WS G+ L G PP +E +I K +P P + N K+ V+
Sbjct: 202 IWSLGITAIELARGEPPH-SELHPMKVLFLIP-----KNNP-PTLEGNYSKPLKEFVEAC 254
Query: 297 LNPDPKQRLTAEEVLEHPW-LQNAKKA 322
LN +P R TA+E+L+H + L+NAKK
Sbjct: 255 LNKEPSFRPTAKELLKHKFILRNAKKT 281
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 141/336 (41%), Gaps = 59/336 (17%)
Query: 34 ANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKK 93
A GS V + + + + Y + +G G FGV Y ++GE A K +
Sbjct: 2 AMGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---- 57
Query: 94 LRTAVDIEDVR---REVQIMKHLPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFD 146
++D R RE+QIM+ L H NIV L+ + E V++ + L E
Sbjct: 58 ------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 110
Query: 147 RIVARGHYTERAAAAVMKTIVEVVQV------CHEQGVMHRDLKPENFLFANKKESSPLK 200
R VAR + + V+ + + Q+ H G+ HRD+KP+N L +++ LK
Sbjct: 111 R-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLK 167
Query: 201 AIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPF 258
DFG + GE + S YY APE++ +Y +DVWSAG +L LL G P F
Sbjct: 168 LCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
Query: 259 WAETEQGVAQAI-------------IRSV---------IDFKRDPW-----PKVSENAKD 291
++ GV Q + IR + K PW P+ A
Sbjct: 228 PGDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA 285
Query: 292 LVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
L ++L P RLT E H + + PNV L
Sbjct: 286 LCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKL 320
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 69
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 70 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 127
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 243
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 304 SFFDELRD-PNVKL 316
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 44/283 (15%)
Query: 105 REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAV-M 163
REV ++K L KH NIV+L D + ++ +V E + +L + G+ + +
Sbjct: 49 REVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL 106
Query: 164 KTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS-VFFRPGEQFNEIVGS 222
++ + CH Q V+HRDLKP+N L + E LK DFGL+ P + ++ V +
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVT 163
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRD 280
+Y P++L +Y ++D+W G I Y + G P F T + I R + +
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEE 223
Query: 281 PWPKVSEN--------------------------AKDLVKKMLNPDPKQRLTAEEVLEHP 314
WP + N DL+ K+L + + R++AE+ ++HP
Sbjct: 224 TWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283
Query: 315 WLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALQVVAEFLS 357
+ +SLGE + +L + + LK+ LQ A S
Sbjct: 284 FF--------LSLGERIH-KLPDTTSIFALKEIQLQKEASLRS 317
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 70
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 71 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 128
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 244
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 245 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 304
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 305 SFFDELRD-PNVKL 317
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 21/271 (7%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G+G FG + D + A K I ++ + ED+++E+ ++ P +
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQC-DSPYVTKY 70
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+Y D+ + I+ME GG D ++ G E A +++ I++ + H + +HRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 183 LKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-YGPEVD 240
+K N L + E +K DFG++ + + N VG+P++MAPEV+K++ Y + D
Sbjct: 130 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN----AKDLVKKM 296
+WS G+ L G PP +E +I K +P P + N K+ V+
Sbjct: 187 IWSLGITAIELARGEPPH-SELHPMKVLFLIP-----KNNP-PTLEGNYSKPLKEFVEAC 239
Query: 297 LNPDPKQRLTAEEVLEHPW-LQNAKKAPNVS 326
LN +P R TA+E+L+H + L+NAKK ++
Sbjct: 240 LNKEPSFRPTAKELLKHKFILRNAKKTSYLT 270
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 21/271 (7%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G+G FG + D + A K I ++ + ED+++E+ ++ P +
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQC-DSPYVTKY 70
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+Y D+ + I+ME GG D ++ G E A +++ I++ + H + +HRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 183 LKPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-YGPEVD 240
+K N L + E +K DFG++ + + N VG+P++MAPEV+K++ Y + D
Sbjct: 130 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 241 VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN----AKDLVKKM 296
+WS G+ L G PP +E +I K +P P + N K+ V+
Sbjct: 187 IWSLGITAIELARGEPPH-SELHPMKVLFLIP-----KNNP-PTLEGNYSKPLKEFVEAC 239
Query: 297 LNPDPKQRLTAEEVLEHPW-LQNAKKAPNVS 326
LN +P R TA+E+L+H + L+NAKK ++
Sbjct: 240 LNKEPSFRPTAKELLKHKFILRNAKKTSYLT 270
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 69
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 70 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 127
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 243
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 304 SFFDELRD-PNVKL 316
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKH 112
+ Y + +G G FGV Y ++GE A K + ++D R RE+QIM+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRK 69
Query: 113 LPKHPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
L H NIV L+ + E V++ + L E R VAR + + V+ +
Sbjct: 70 L-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLY 127
Query: 169 VVQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
+ Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 223 PYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI---------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPT 243
Query: 271 ---IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEH 313
IR + K PW P+ A L ++L P RLT E H
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 314 PWLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 304 SFFDELRD-PNVKL 316
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
+ Y + +G G FGV Y ++GE A K + + K RE+QIM+ L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKL-D 71
Query: 116 HPNIVSLKDTY----EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
H NIV L+ + E V++ + L E R VAR + + V+ + + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQ 130
Query: 172 V------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYY 225
+ H G+ HRD+KP+N L +++ LK DFG + GE + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 226 MAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI------------- 270
APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQ 246
Query: 271 IRSV---------IDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
IR + K PW P+ A L ++L P RLT E H +
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 317 QNAKKAPNVSL 327
+ PNV L
Sbjct: 307 DELRD-PNVKL 316
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 20/264 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G+G FG Y D + E A K I ++ + ED+++E+ ++ P I
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI--EDIQQEITVLSQC-DSPYITRYF 83
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+Y + + I+ME GG D ++ G E A +++ I++ + H + +HRD+
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-YGPEVDV 241
K N L + E +K DFG++ + + N VG+P++MAPEV+K++ Y + D+
Sbjct: 143 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKV----SENAKDLVKKML 297
WS G+ L G PP +R + ++ P + S+ K+ V+ L
Sbjct: 200 WSLGITAIELAKGEPP-------NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACL 252
Query: 298 NPDPKQRLTAEEVLEHPWLQNAKK 321
N DP+ R TA+E+L+H ++ K
Sbjct: 253 NKDPRFRPTAKELLKHKFITRYTK 276
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+ ++G+G FG + G+K A K + + + I +R E++I++ L KH
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHE 77
Query: 118 NIVSLKDTYEDDSA--------VHIVMELCE---GGELFDRIVARGHYTERAAAAVMKTI 166
N+V+L + ++ +++V + CE G L + +V +T VM+ +
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQML 134
Query: 167 VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF------RPGEQFNEIV 220
+ + H ++HRD+K N L LK DFGL+ F +P N +V
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 221 GSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFK 278
+ +Y PE+L +R+YGP +D+W AG I+ + P TEQ I +
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 279 RDPWPKVSE----------------------------NAKDLVKKMLNPDPKQRLTAEEV 310
+ WP V A DL+ K+L DP QR+ +++
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 311 LEH 313
L H
Sbjct: 311 LNH 313
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 133/313 (42%), Gaps = 57/313 (18%)
Query: 56 IDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPK 115
+ Y + +G G FGV Y ++GE A K + + K RE+QIM+ L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKL-D 71
Query: 116 HPNIVSLKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEV 169
H NIV L+ + +D+ +++V++ VAR + + V+ + +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR---VARHYSRAKQTLPVIYVKLYM 128
Query: 170 VQV------CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP 223
Q+ H G+ HRD+KP+N L +++ LK DFG + GE + S
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 224 YYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI----------- 270
YY APE++ +Y +DVWSAG +L LL G P F ++ GV Q +
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTR 244
Query: 271 --IR---------SVIDFKRDPW-----PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHP 314
IR + K PW P+ A L ++L P RLT E H
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 315 WLQNAKKAPNVSL 327
+ + PNV L
Sbjct: 305 FFDELRD-PNVKL 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+ ++G+G FG + G+K A K + + + I +R E++I++ L KH
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHE 77
Query: 118 NIVSLKDTYEDDSA--------VHIVMELCE---GGELFDRIVARGHYTERAAAAVMKTI 166
N+V+L + ++ +++V + CE G L + +V +T VM+ +
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQML 134
Query: 167 VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF------RPGEQFNEIV 220
+ + H ++HRD+K N L LK DFGL+ F +P N +V
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 221 GSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFK 278
+ +Y PE+L +R+YGP +D+W AG I+ + P TEQ I +
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 279 RDPWPKVSE----------------------------NAKDLVKKMLNPDPKQRLTAEEV 310
+ WP V A DL+ K+L DP QR+ +++
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 311 LEH 313
L H
Sbjct: 311 LNH 313
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+ ++G+G FG + G+K A K + + + I +R E++I++ L KH
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHE 77
Query: 118 NIVSLKDTYEDDSA--------VHIVMELCE---GGELFDRIVARGHYTERAAAAVMKTI 166
N+V+L + ++ +++V + CE G L + +V +T VM+ +
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQML 134
Query: 167 VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF------RPGEQFNEIV 220
+ + H ++HRD+K N L LK DFGL+ F +P N +V
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 221 GSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFK 278
+ +Y PE+L +R+YGP +D+W AG I+ + P TEQ I +
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 279 RDPWPKVSE----------------------------NAKDLVKKMLNPDPKQRLTAEEV 310
+ WP V A DL+ K+L DP QR+ +++
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 311 LEH 313
L H
Sbjct: 311 LNH 313
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DGDG++
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DGDG++
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 16/272 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ + R +GRG FG Y C + G+ +A K + KK+++ E + +IM L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVST 248
Query: 117 ---PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
P IV + + + +++L GG+L + G ++E I+ ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H + V++RDLKP N L E ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 309 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQK 364
Query: 234 N--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
Y D +S G +L+ LL G PF + I R + + S +
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRS 423
Query: 292 LVKKMLNPDPKQRL-----TAEEVLEHPWLQN 318
L++ +L D +RL A+EV E P+ ++
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y+ ++G+G FG + G+K A K + + + I +R E++I++ L KH
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHE 76
Query: 118 NIVSLKDTYEDDSA--------VHIVMELCE---GGELFDRIVARGHYTERAAAAVMKTI 166
N+V+L + ++ +++V + CE G L + +V +T VM+ +
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQML 133
Query: 167 VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF------RPGEQFNEIV 220
+ + H ++HRD+K N L LK DFGL+ F +P N +V
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 221 GSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFK 278
+ +Y PE+L +R+YGP +D+W AG I+ + P TEQ I +
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 279 RDPWPKVSE----------------------------NAKDLVKKMLNPDPKQRLTAEEV 310
+ WP V A DL+ K+L DP QR+ +++
Sbjct: 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309
Query: 311 LEH 313
L H
Sbjct: 310 LNH 312
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DGDG++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 16/272 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ + R +GRG FG Y C + G+ +A K + KK+++ E + +IM L
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVST 247
Query: 117 ---PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
P IV + + + +++L GG+L + G ++E I+ ++
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H + V++RDLKP N L E ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 308 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQK 363
Query: 234 N--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
Y D +S G +L+ LL G PF + I R + + S +
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRS 422
Query: 292 LVKKMLNPDPKQRL-----TAEEVLEHPWLQN 318
L++ +L D +RL A+EV E P+ ++
Sbjct: 423 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 454
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DGDG++
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 13/257 (5%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG G +G + +G +A K S R D EV + + +HP V L+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARG-HYTERAAAAVMKTIVEVVQVCHEQGVMHRD 182
+E+ +++ ELC G L A G E ++ + + H QG++H D
Sbjct: 124 QAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182
Query: 183 LKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGPEVDVW 242
+KP N + K DFGL V G P YMAPE+L+ +YG DV+
Sbjct: 183 VKPANIFLGPRGRC---KLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVF 239
Query: 243 SAGVILYILLCGVP-PFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDP 301
S G+ + + C + P E Q + Q + +F +S + ++ ML PDP
Sbjct: 240 SLGLTILEVACNMELPHGGEGWQQLRQGYLPP--EFTAG----LSSELRSVLVMMLEPDP 293
Query: 302 KQRLTAEEVLEHPWLQN 318
K R TAE +L P L+
Sbjct: 294 KLRATAEALLALPVLRQ 310
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 44/290 (15%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
R +G G +G D +K A K +S+ ++ + RE++++KHL KH N++
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHL-KHENVIG 83
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L D + ED S V++V L G + IV ++ ++ ++ ++ H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR-- 233
G++HRDLKP N E L+ +DFGL+ + E+ V + +Y APE++
Sbjct: 142 AGIIHRDLKPSNVAV---NEDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 196
Query: 234 NYGPEVDVWSAGVILYILLCG-----------------------VPPFWAETEQGVAQAI 270
+Y VD+WS G I+ LL G P A+ A+
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 256
Query: 271 IRSVIDFKRDPWPKVSENAK----DLVKKMLNPDPKQRLTAEEVLEHPWL 316
I+S+ + + A DL+ +ML D QR++A E L H +
Sbjct: 257 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 16/272 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ + R +GRG FG Y C + G+ +A K + KK+++ E + +IM L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVST 248
Query: 117 ---PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
P IV + + + +++L GG+L + G ++E I+ ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H + V++RDLKP N L E ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 309 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQK 364
Query: 234 N--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
Y D +S G +L+ LL G PF + I R + + S +
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRS 423
Query: 292 LVKKMLNPDPKQRL-----TAEEVLEHPWLQN 318
L++ +L D +RL A+EV E P+ ++
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 16/272 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+ + R +GRG FG Y C + G+ +A K + KK+++ E + +IM L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVST 248
Query: 117 ---PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
P IV + + + +++L GG+L + G ++E I+ ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 174 HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
H + V++RDLKP N L E ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 309 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQK 364
Query: 234 N--YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD 291
Y D +S G +L+ LL G PF + I R + + S +
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRS 423
Query: 292 LVKKMLNPDPKQRL-----TAEEVLEHPWLQN 318
L++ +L D +RL A+EV E P+ ++
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 48/290 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ + LGRG FGV + + + +A K I A E V REV+ + L +H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKL-EH 62
Query: 117 PNIVSLKDTYEDDSA------------VHIVMELCEGGELFDRIVARGHYTERAAAAVMK 164
P IV + + + + ++I M+LC L D + R ER + +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 165 T---IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEI-- 219
I E V+ H +G+MHRDLKP N F +K DFGL E+ +
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 220 -----------VGSPYYMAPEVLKRN-YGPEVDVWSAGVILYILLCGVPPFWAETEQGVA 267
VG+ YM+PE + N Y +VD++S G+IL+ LL PF + E+
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER--- 233
Query: 268 QAIIRSVIDFKRDPWPKVSENAKD----LVKKMLNPDPKQRLTAEEVLEH 313
+R++ D + +P + +V+ ML+P P +R A ++E+
Sbjct: 234 ---VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E S LK +DFGL ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDSELKILDFGLCR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 89
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E S LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 148 IIHRDLKPSNLAV---NEDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 202
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 263 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 93
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E S LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 152 IIHRDLKPSNLAV---NEDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 206
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 267 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
AE L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+++ +K+ ++E L +AF FDR+ +G I ELR+ + + + +D
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMM 496
++ ++ + D D DG I+YEEF MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAV 423
L EAF++ D + G I+ + + + ++ ++ AD+DGDG +NY EFV +
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
Query: 424 SV 425
V
Sbjct: 145 MV 146
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 83
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 142 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 196
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 257 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTA 147
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 388 MIREADIDGDGQVNYEEFVQMMTA 411
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 107
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 166 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 220
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 281 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +SK ++ + + RE++++KH+ KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 99
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 158 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 212
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 273 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 20/254 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++ + +GRG FG + N +A K ++K ++ + R E ++ +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDC 133
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAAVMKTIVEVVQVCHE 175
I +L ++D++ +++VM+ GG+L + E A + +V + H+
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFG--LSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+HRD+KP+N L + ++ DFG L + Q + VG+P Y++PE+L+
Sbjct: 194 LHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 234 ------NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK--- 284
YGPE D WS GV +Y +L G PF+AE+ I+ F+ +P
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVT 307
Query: 285 -VSENAKDLVKKML 297
VSE AKDL+++++
Sbjct: 308 DVSEEAKDLIQRLI 321
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 426 MIREADIDGDGQVNYEEFVQMMTA 449
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 106
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 165 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 219
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 220 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 279
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 280 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMTA 414
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 93
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 152 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 206
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 267 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMTA 414
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 20/254 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++ + +GRG FG + N +A K ++K ++ + R E ++ +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDC 149
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAAVMKTIVEVVQVCHE 175
I +L ++D++ +++VM+ GG+L + E A + +V + H+
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFG--LSVFFRPGEQFNEIVGSPYYMAPEVLKR 233
+HRD+KP+N L + ++ DFG L + Q + VG+P Y++PE+L+
Sbjct: 210 LHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 234 ------NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK--- 284
YGPE D WS GV +Y +L G PF+AE+ I+ F+ +P
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVT 323
Query: 285 -VSENAKDLVKKML 297
VSE AKDL+++++
Sbjct: 324 DVSEEAKDLIQRLI 337
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 97
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 155
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 156 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 210
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 211 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 270
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 271 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DGD
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTA 448
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 63
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YM+PE L
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 175
Query: 232 K-RNYGPEVDVWSAGVILYILLCG---VPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSE 287
+ +Y + D+WS G+ L + G +PP A+ + AI + +P PK+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPS 235
Query: 288 NA-----KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+D V K L +P +R ++++ H +++ +
Sbjct: 236 GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 94
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 153 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHY 207
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 268 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 38/299 (12%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLP--K 115
Y+ E+G G +G Y D ++G A KS+ + I VR EV +++ L +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAFE 64
Query: 116 HPNIVSLKD---TYEDDSAVHIVMELCEGGE----LFDRIVARGHYTERAAAAVMKTIVE 168
HPN+V L D T D + + + + D+ G E +M+ +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLR 123
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAP 228
+ H ++HRDLKPEN L + +K DFGL+ + + +V + +Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTLWYRAP 180
Query: 229 EV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK--- 284
EV L+ Y VD+WS G I + P F +E I + D WP+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 285 --------------------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
+ E+ L+ +ML +P +R++A L+H +L + P
Sbjct: 241 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 94
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 153 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHY 207
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 268 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 94
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 153 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHY 207
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 268 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 107
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 166 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMXGXVATRWYRAPEIMLNWMHY 220
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 281 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 83
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 142 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 196
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 257 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRNY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNAMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+++ +K+ ++E L +AF FDR+ +G I ELR+ + + + +D
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMM 496
++ ++ + D D DG I+YEEF MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAV 423
L EAF++ D + G I+ + + + ++ ++ AD+DGDG +NY EFV +
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
Query: 424 SV 425
V
Sbjct: 145 MV 146
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 92
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 151 IIHRDLKPSNLAV---NEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 205
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 266 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 83
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 142 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHY 196
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 257 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 99
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 158 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 212
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 273 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 99
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 158 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 212
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 273 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 98
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 157 IIHRDLKPSNLAV---NEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 211
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 212 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 272 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 98
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 157 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 211
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 212 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 272 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMM 496
++ ++ + D D DG+++YEEF MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM +
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 89
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 148 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 202
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 263 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 107
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 166 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 220
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 281 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 93
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 152 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 206
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 267 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 106
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 165 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 219
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 220 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 279
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 280 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 93
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 152 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 206
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 267 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 92
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 151 IIHRDLKPSNLAV---NEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 205
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 266 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 110
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 169 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 223
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 224 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 284 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM +
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 92
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 151 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 205
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 266 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 92
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 151 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 205
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 266 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 86
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 144
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 145 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 199
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 200 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 259
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 260 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 94
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 153 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 207
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 268 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGXVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 89
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 148 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 202
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 263 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 21/270 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G+G FG + D + A K I ++ + ED+++E+ ++ +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI--EDIQQEITVLSQC-DSSYVTKYY 87
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+Y S + I+ME GG D + A G + E A ++K I++ + H + +HRD+
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDI 146
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRPGE-QFNEIVGSPYYMAPEVLKRN-YGPEVDV 241
K N L + E +K DFG++ + + N VG+P++MAPEV++++ Y + D+
Sbjct: 147 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 242 WSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKV----SENAKDLVKKML 297
WS G+ L G PP +R + ++ P + +++ K+ + L
Sbjct: 204 WSLGITAIELAKGEPP-------NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACL 256
Query: 298 NPDPKQRLTAEEVLEHPWL-QNAKKAPNVS 326
N DP R TA+E+L+H ++ +N+KK ++
Sbjct: 257 NKDPSFRPTAKELLKHKFIVKNSKKTSYLT 286
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 85
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 143
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 144 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 198
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 199 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 258
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 259 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 110
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 169 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMXGYVATRWYRAPEIMLNWMHY 223
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 224 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 284 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 132/347 (38%), Gaps = 74/347 (21%)
Query: 40 VHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVD 99
+H +C SG +S Y++ LG G FG C D G + I K R
Sbjct: 2 MHLIC----QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC-- 55
Query: 100 IEDVRREVQIMKHL-PKHPN----IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHY 154
E R E+Q+++HL PN V + + +E + IV EL G +D I G
Sbjct: 56 -EAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFL 113
Query: 155 TERA--AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSP-------------- 198
R + I + V H + H DLKPEN LF +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 199 --LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVIL---YILL 252
+K +DFG + + E + +V + +Y APEV L + DVWS G IL Y+
Sbjct: 174 PDIKVVDFGSATY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231
Query: 253 CGVPPFWAETEQGVAQAII-------------RSVIDFKRDPWPKVSENAK--------- 290
P ++ + + I+ R R W + S +
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Query: 291 ---------------DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKA 322
DL++KML DP +R+T E L+HP+ KK+
Sbjct: 292 KEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 27/275 (9%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 82
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YM+PE L
Sbjct: 143 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 194
Query: 232 K-RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDF-KRDPWPKVSENA 289
+ +Y + D+WS G+ L + G P + G I ++D+ +P PK+
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPIGS----GSGSMAIFELLDYIVNEPPPKLPSGV 250
Query: 290 -----KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+D V K L +P +R ++++ H +++ +
Sbjct: 251 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 83
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 142 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 196
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 257 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 133/311 (42%), Gaps = 60/311 (19%)
Query: 58 YDLG------RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMK 111
+DLG + LG G G+ + D + ++ A K I L ++ RE++I++
Sbjct: 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIR 63
Query: 112 HLPKHPNIVSLKDTY-------EDD-------SAVHIVMELCEGGELFDRIVARGHYTER 157
L H NIV + + DD ++V+IV E E ++ +G E
Sbjct: 64 RL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEE 120
Query: 158 AAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE--- 214
A M ++ ++ H V+HRDLKP N LF N E LK DFGL+ P
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPAN-LFINT-EDLVLKIGDFGLARIMDPHYSHK 178
Query: 215 -QFNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII 271
+E + + +Y +P +L NY +D+W+AG I +L G F E Q I+
Sbjct: 179 GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 272 RSV----------------IDFKRDP----------WPKVSENAKDLVKKMLNPDPKQRL 305
S+ + + D P +S A D ++++L P RL
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 306 TAEEVLEHPWL 316
TAEE L HP++
Sbjct: 299 TAEEALSHPYM 309
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 84
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 143 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 197
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 198 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 258 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 89
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 148 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 202
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 263 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 84
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ ++ V + +Y APE++ +Y
Sbjct: 143 IIHRDLKPSNLAV---NEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 197
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 198 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 258 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 38/284 (13%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D+++ + +GRG F + G+ +A K ++K + ++ R E ++ + +
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRR 121
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAV----MKTIVEVVQV 172
I L ++D++ +++VME GG+L + G ER A + + IV +
Sbjct: 122 -WITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDS 177
Query: 173 CHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV--GSPYYMAPEV 230
H G +HRD+KP+N L ++ DFG + R +V G+P Y++PE+
Sbjct: 178 VHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 231 LK--------RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIR-------SVI 275
L+ +YGPE D W+ GV Y + G PF+A++ I+ ++
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV 294
Query: 276 DFKRDPWPKVSENAKDLVKKMLNPDPKQRL---TAEEVLEHPWL 316
D V E A+D ++++L P P+ RL A + HP+
Sbjct: 295 D------EGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPFF 331
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMMTA 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 38/299 (12%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLP--K 115
Y+ E+G G +G Y D ++G A KS+ + I VR EV +++ L +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAFE 64
Query: 116 HPNIVSLKD---TYEDDSAVHIVMELCEGGE----LFDRIVARGHYTERAAAAVMKTIVE 168
HPN+V L D T D + + + + D+ G E +M+ +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLR 123
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAP 228
+ H ++HRDLKPEN L + +K DFGL+ + +V + +Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTLWYRAP 180
Query: 229 EV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK--- 284
EV L+ Y VD+WS G I + P F +E I + D WP+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 285 --------------------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
+ E+ L+ +ML +P +R++A L+H +L + P
Sbjct: 241 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Query: 351 VVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVD 410
+A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 411 GDGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGE 469
G+G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + +
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 470 DVINAIMHDVDTDKDGRISYEEFAVMMKA 498
+ ++ ++ + D D DG+++YEEF MM A
Sbjct: 123 EEVDEMIREADIDGDGQVNYEEFVQMMTA 151
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G K A K + + ++ + + RE++++KH+ +H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHM-RHENVIGLL 90
Query: 124 DTYEDDSAV------HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + D + ++VM G +++ E ++ +++ ++ H G
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DFGL+ + + V + +Y APEV+ Y
Sbjct: 149 IIHRDLKPGNLAV---NEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 236 GPEVDVWSAGVILYILLCG---------------------VPP--FWAETEQGVAQAIIR 272
VD+WS G I+ ++ G PP F + A+ ++
Sbjct: 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 273 SVIDFKRDPWPKVSENAK----DLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+ + ++ + + NA +L++KML D +QR+TA E L HP+ ++
Sbjct: 264 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 38/299 (12%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLP--K 115
Y+ E+G G +G Y D ++G A KS+ + I VR EV +++ L +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAFE 64
Query: 116 HPNIVSLKD---TYEDDSAVHIVMELCEGGE----LFDRIVARGHYTERAAAAVMKTIVE 168
HPN+V L D T D + + + + D+ G E +M+ +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLR 123
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAP 228
+ H ++HRDLKPEN L + +K DFGL+ + +V + +Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTLWYRAP 180
Query: 229 EV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK--- 284
EV L+ Y VD+WS G I + P F +E I + D WP+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 285 --------------------VSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
+ E+ L+ +ML +P +R++A L+H +L + P
Sbjct: 241 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM A
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMTA 145
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVHLKKMAN-DEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ ++ +KM + +E + +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 GTIDFPEFL--TMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF MM +
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 55/305 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y + +G G G+ D G A K +S+ + + RE+ ++K + H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCV-NHK 83
Query: 118 NIVSL------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
NI+SL + T E+ V++VMEL + +++ ER + + + + +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIKH 141
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV- 230
+ H G++HRDLKP N + K LK +DFGL+ V + YY APEV
Sbjct: 142 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 231 LKRNYGPEVDVWSAGVILYILLCGVPPF--------WAET-EQ---------GVAQAIIR 272
L Y VD+WS G I+ L+ G F W + EQ Q +R
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 257
Query: 273 SVIDFKRDPWPKV---------------------SENAKDLVKKMLNPDPKQRLTAEEVL 311
+ ++ R +P + + A+DL+ KML DP +R++ +E L
Sbjct: 258 NYVE-NRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEAL 316
Query: 312 EHPWL 316
HP++
Sbjct: 317 RHPYI 321
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +D+GL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDYGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF MM A
Sbjct: 121 MIREADIDGDGQVNYEEFVQMMTA 144
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 131/347 (37%), Gaps = 74/347 (21%)
Query: 40 VHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVD 99
+H +C SG +S Y++ LG G FG C D G + I K R
Sbjct: 2 MHLIC----QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC-- 55
Query: 100 IEDVRREVQIMKHL-PKHPN----IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHY 154
E R E+Q+++HL PN V + + +E + IV EL G +D I G
Sbjct: 56 -EAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFL 113
Query: 155 TERA--AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSP-------------- 198
R + I + V H + H DLKPEN LF +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 199 --LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVIL---YILL 252
+K +DFG + + E + +V +Y APEV L + DVWS G IL Y+
Sbjct: 174 PDIKVVDFGSATY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231
Query: 253 CGVPPFWAETEQGVAQAII-------------RSVIDFKRDPWPKVS------------- 286
P ++ + + I+ R R W + S
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL 291
Query: 287 -----------ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKA 322
E DL++KML DP +R+T E L+HP+ KK+
Sbjct: 292 KEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 127/311 (40%), Gaps = 41/311 (13%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSI---SKKKLRTAVDIEDVRR 105
P G + Y+ E+G G +G Y D ++G A KS+ + + I VR
Sbjct: 2 PLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR- 60
Query: 106 EVQIMKHLP--KHPNIVSLKD---TYEDDSAVHIVMELCEGGE----LFDRIVARGHYTE 156
EV +++ L +HPN+V L D T D + + + + D+ G E
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 157 RAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+M+ + + H ++HRDLKPEN L + +K DFGL+ +
Sbjct: 121 -TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 176
Query: 217 NEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVI 275
+V + +Y APEV L+ Y VD+WS G I + P F +E I +
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 276 DFKRDPWPK-----------------------VSENAKDLVKKMLNPDPKQRLTAEEVLE 312
D WP+ + E+ L+ +ML +P +R++A L+
Sbjct: 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296
Query: 313 HPWLQNAKKAP 323
H +L + P
Sbjct: 297 HSYLHKDEGNP 307
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 55/305 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y + +G G G+ D G A K +S+ + + RE+ ++K + H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCV-NHK 81
Query: 118 NIVSL------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ 171
NI+SL + T E+ V++VMEL + +++ ER + + + + +
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIKH 139
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV- 230
+ H G++HRDLKP N + K LK +DFGL+ V + YY APEV
Sbjct: 140 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 231 LKRNYGPEVDVWSAGVILYILLCGVPPF--------WAET-EQ---------GVAQAIIR 272
L Y VD+WS G I+ L+ G F W + EQ Q +R
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 255
Query: 273 SVIDFKRDPWPKV---------------------SENAKDLVKKMLNPDPKQRLTAEEVL 311
+ ++ R +P + + A+DL+ KML DP +R++ +E L
Sbjct: 256 NYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEAL 314
Query: 312 EHPWL 316
HP++
Sbjct: 315 RHPYI 319
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E L +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF +M A
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E L +AF FD++ +GFI ELR+ + + + ++
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+++YEEF +M A
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 132/308 (42%), Gaps = 49/308 (15%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSI---SKKKLRTAVDIEDVRREVQIMKHLPKHPN 118
R L G F Y DV +G ++A K + ++K R + +EV MK L HPN
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII------QEVCFMKKLSGHPN 87
Query: 119 IVSL--------KDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVE 168
IV +++ + ++ ELC+G E ++ +RG + +
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 169 VVQVCHEQG--VMHRDLKPENFLFANKKESSPLKAIDFG--LSVFFRPGEQFN------- 217
VQ H Q ++HRDLK EN L +N+ +K DFG ++ P ++
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 218 --EIV--GSPYYMAPEV--LKRNY--GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQA 269
EI +P Y PE+ L N+ G + D+W+ G ILY+L PF E G
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLR 260
Query: 270 IIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGE 329
I+ + P L++ ML +P++RL+ EV+ LQ A NV+
Sbjct: 261 IVNG--KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ--LQEIAAARNVNPKS 316
Query: 330 TVKARLKQ 337
+ L+Q
Sbjct: 317 PITELLEQ 324
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 66
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RN 234
+MHRD+KP N L ++ E +K DFG+S E NE VG+ YM+PE L+ +
Sbjct: 127 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTH 182
Query: 235 YGPEVDVWSAGVILYILLCG---VPPFWAETEQGVAQAIIRSVIDFKRDPWPKV-----S 286
Y + D+WS G+ L + G PP AI + +P PK+ S
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPM----------AIFELLDYIVNEPPPKLPSAVFS 232
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
+D V K L +P +R ++++ H +++ +
Sbjct: 233 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 265
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +DF L+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDFYLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + +V + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K + LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS GVI+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E L +AF FD++ +GFI ELR+ + + + ++ ++
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D D DG+++YEEF +M A
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMMA 144
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK + FGL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILGFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + + D DG+++YEEF MM A
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMMTA 147
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Query: 359 EEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYG 418
E++A KEAF + D + G I QN EA+LQ ++ D DG+G++++
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 419 EFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMH 477
EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++ ++
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 124
Query: 478 DVDTDKDGRISYEEFAVMMKA 498
+ D D DG+++YEEF MM A
Sbjct: 125 EADIDGDGQVNYEEFVQMMTA 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 475 IMHDVDTDKDGRISYEEFAVMM 496
++ + D D DG+++YEEF MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Query: 359 EEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYG 418
E++A KEAF + D + G I QN EA+LQ ++ D DG+G++++
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 419 EFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMH 477
EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++ ++
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 122
Query: 478 DVDTDKDGRISYEEFAVMMKA 498
+ D D DG+++YEEF MM A
Sbjct: 123 EADIDGDGQVNYEEFVQMMTA 143
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ ++++ KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E L +AF FD++++GFI ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+I+YEEF +M A
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + +V + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K + LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS GVI+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ D DG+G++
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + +K ++E + +AF FD++ +G+I ELR+ + + + ++ ++
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 475 IMHDVDTDKDGRISYEEFAVMM 496
++ + D D DG+++YEEF MM
Sbjct: 123 MIREADIDGDGQVNYEEFVQMM 144
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%)
Query: 359 EEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYG 418
E++A KEAF + D + G I QN EA+LQ ++ D DG+G++++
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 419 EFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHD 478
EF+ + K + E + +AF FD++ +G+I ELR+ + + + ++ ++ ++ +
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 122
Query: 479 VDTDKDGRISYEEFAVMMKA 498
+ D DG+++YEEF MM A
Sbjct: 123 ANIDGDGQVNYEEFVQMMTA 142
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 134/336 (39%), Gaps = 84/336 (25%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLP 114
Y LG+ LG G FG+ D+ +G++FA K + ++D R RE+ IMK L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKV----------LQDPRYKNRELDIMKVL- 57
Query: 115 KHPNIVSLKDTY--------------------------------------EDDSAVHIVM 136
H NI+ L D + + ++++M
Sbjct: 58 DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117
Query: 137 ELCEGG--ELFDRIVARGHYTERAAAAV-MKTIVEVVQVCHEQGVMHRDLKPENFLFANK 193
E ++ + G ++ + + V H G+ HRD+KP+N L N
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQN-LLVNS 176
Query: 194 KESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYIL 251
K+++ LK DFG + P E + S +Y APE++ Y P +D+WS G + L
Sbjct: 177 KDNT-LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Query: 252 LCGVPPFWAET-----------------EQGVAQAIIRSVIDF---KRDPWPKV-----S 286
+ G P F ET EQ + + + F K W K+
Sbjct: 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTP 295
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKA 322
A DL++++L +P R+ E + HP+ + + +
Sbjct: 296 SLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS 331
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 56 IDY---DLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
IDY ++ +GRG FGV +C + A K I + R A +E +R+ ++
Sbjct: 5 IDYKEIEVEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVE-LRQLSRV--- 58
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ- 171
HPNIV L + V +VME EGG L++ + AA M ++ Q
Sbjct: 59 --NHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQG 114
Query: 172 -----VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYM 226
+ ++HRDLKP N L + LK DFG + + N+ GS +M
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTNNK--GSAAWM 170
Query: 227 APEVLK-RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK- 284
APEV + NY + DV+S G+IL+ ++ PF + G A I+ +V + R P K
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKN 228
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLE 312
+ + + L+ + + DP QR + EE+++
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 142/356 (39%), Gaps = 100/356 (28%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y++ +GRG +G YL D N + A K +++ +D + + RE+ I+ L K
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRM-FEDLIDCKRILREITILNRL-KS 86
Query: 117 PNIVSLKDTYEDDSAV-----HIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEV 169
I+ L D + + +IV+E+ + +LF + TE+ ++ ++
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNLLLG 143
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS-------------------VFF 210
+ HE G++HRDLKP N L + +K DFGL+
Sbjct: 144 EKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 211 RPG-------EQFNEIVGSPYYMAPE--VLKRNYGPEVDVWSAGVILYILL--------- 252
PG +Q V + +Y APE +L+ NY +D+WS G I LL
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 253 ----------------------------------------CGVPP---FWAETEQGVAQA 269
G PP T+Q V +
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKY 320
Query: 270 I----IRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
I R ID + + +S+ DL++ ML + ++R+T ++ L HP+L++ +K
Sbjct: 321 IKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRK 375
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +D GL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDAGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 27/268 (10%)
Query: 56 IDY---DLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
IDY ++ +GRG FGV +C + A K I + R A +E +R+ ++
Sbjct: 6 IDYKEIEVEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVE-LRQLSRV--- 59
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQ- 171
HPNIV L + V +VME EGG L++ + AA M ++ Q
Sbjct: 60 --NHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQG 115
Query: 172 -----VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYM 226
+ ++HRDLKP N L + LK DFG + + N+ GS +M
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTNNK--GSAAWM 171
Query: 227 APEVLK-RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK- 284
APEV + NY + DV+S G+IL+ ++ PF + G A I+ +V + R P K
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKN 229
Query: 285 VSENAKDLVKKMLNPDPKQRLTAEEVLE 312
+ + + L+ + + DP QR + EE+++
Sbjct: 230 LPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 355 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGS 414
FLS E +A K AF+M D + G I+ QN + +L ++E D DG G+
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 415 LNYGEFVAVSV-HLKKMA---NDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+++ EF+ + V +K+ A ++E L F FD+N GFI+IEEL L + E+
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
I +M D D + DGRI ++EF MM+
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLR-TAVDIEDVRREVQIMKHLPKHPNIVSL 122
+G G FG Y + G++ A K+ + IE+VR+E ++ L KHPNI++L
Sbjct: 15 IGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIAL 71
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG---VM 179
+ + + +VME GG L +R+++ I + H++ ++
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 180 HRDLKPENFLFANKKESSP-----LKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRN 234
HRDLK N L K E+ LK DFGL+ + + + G+ +MAPEV++ +
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMAPEVIRAS 189
Query: 235 -YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS-ENAKDL 292
+ DVWS GV+L+ LL G PF VA + + + P P E L
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL---PIPSTCPEPFAKL 246
Query: 293 VKKMLNPDPKQRLTAEEVLEH 313
++ NPDP R + +L+
Sbjct: 247 MEDCWNPDPHSRPSFTNILDQ 267
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LGRG FG + D G F C + KK+R +E R E + P IV L
Sbjct: 101 LGRGSFGEVHRMEDKQTG--FQC---AVKKVR----LEVFRAEELMACAGLTSPRIVPLY 151
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ V+I MEL EGG L + +G E A + +E ++ H + ++H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRP---GEQF---NEIVGSPYYMAPE-VLKRNYG 236
K +N L ++ + L DFG +V +P G+ + I G+ +MAPE VL R+
Sbjct: 212 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKM 296
+VDVWS+ ++ +L G P W + +G I S R+ P + +++
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 328
Query: 297 LNPDPKQRLTAEEV 310
L +P R++A E+
Sbjct: 329 LRKEPIHRVSAAEL 342
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G +L + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +D GL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDRGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 44/288 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G +G D G + A K +S+ ++ + + RE++++KH+ KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLL 87
Query: 124 DTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
D + E+ + V++V L G + IV T+ ++ I+ ++ H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--NY 235
++HRDLKP N E LK +D GL+ ++ V + +Y APE++ +Y
Sbjct: 146 IIHRDLKPSNLAV---NEDCELKILDGGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 236 GPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN------- 288
VD+WS G I+ LL G F + I+R V + K+S
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
Query: 289 --------------------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
A DL++KML D +R+TA + L H +
Sbjct: 261 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 355 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGS 414
FLS E +A K AF+M D + G I+ QN + +L ++E D DG G+
Sbjct: 10 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 415 LNYGEFVAVSV-HLKKMA---NDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+++ EF+ + V +K+ A ++E L F FD+N GFI+IEEL L + E+
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 129
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
I +M D D + DGRI ++EF MM+
Sbjct: 130 DIEDLMKDSDKNNDGRIDFDEFLKMMEG 157
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 355 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGS 414
FLS E +A K AF+M D + G I+ QN + +L ++E D DG G+
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 415 LNYGEFVAVSV-HLKKMA---NDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+++ EF+ + V +K+ A ++E L F FD+N GFI+IEEL L + E+
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
I +M D D + DGRI ++EF MM+
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 355 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGS 414
FLS E +A K AF+M D + G I+ QN + +L ++E D DG G+
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 415 LNYGEFVAVSV-HLKKMA---NDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+++ EF+ + V +K+ A ++E L F FD+N GFI+IEEL L + E+
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
I +M D D + DGRI ++EF MM+
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 48/289 (16%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G GEFG + C +G +A K SKK L +VD ++ REV L +H ++V
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR----GHYTERAAAAVMKTIVEVVQVCHEQGV 178
+ +D + I E C GG L D I ++ E ++ + ++ H +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFG-------LSVFFRPGE----------QFNEIVG 221
+H D+KP N + + S P A + G V F+ G+ Q E G
Sbjct: 133 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE--G 188
Query: 222 SPYYMAPEVLKRNYG--PEVDVWSAGVILYILLCGVPPF------WAETEQGVAQAIIRS 273
++A EVL+ NY P+ D+++ + + + G P W E QG I
Sbjct: 189 DSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRLPRI--- 244
Query: 274 VIDFKRDPWPKV-SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
P+V S+ +L+K M++PDP++R +A +++H L +A +
Sbjct: 245 ---------PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 284
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+A+ L+ ++++ KEAF + D + G I QN EA+LQ ++ D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 412 DGSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+G++++ EF+ + +K ++E L +AF FD++++GFI ELR+ + + + ++
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
++ ++ + D D DG+I+Y+EF +M A
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMA 148
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 48/289 (16%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G GEFG + C +G +A K SKK L +VD ++ REV L +H ++V
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR----GHYTERAAAAVMKTIVEVVQVCHEQGV 178
+ +D + I E C GG L D I ++ E ++ + ++ H +
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFG-------LSVFFRPGE----------QFNEIVG 221
+H D+KP N + + S P A + G V F+ G+ Q E G
Sbjct: 137 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE--G 192
Query: 222 SPYYMAPEVLKRNYG--PEVDVWSAGVILYILLCGVPPF------WAETEQGVAQAIIRS 273
++A EVL+ NY P+ D+++ + + + G P W E QG I
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRI--- 248
Query: 274 VIDFKRDPWPKV-SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
P+V S+ +L+K M++PDP++R +A +++H L +A +
Sbjct: 249 ---------PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LGRG FG + D G F C + KK+R +E R E + P IV L
Sbjct: 82 LGRGSFGEVHRMEDKQTG--FQC---AVKKVR----LEVFRAEELMACAGLTSPRIVPLY 132
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ V+I MEL EGG L + +G E A + +E ++ H + ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRP---GEQF---NEIVGSPYYMAPE-VLKRNYG 236
K +N L ++ + L DFG +V +P G+ + I G+ +MAPE VL R+
Sbjct: 193 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKM 296
+VDVWS+ ++ +L G P W + +G I S R+ P + +++
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 309
Query: 297 LNPDPKQRLTAEEV 310
L +P R++A E+
Sbjct: 310 LRKEPIHRVSAAEL 323
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 20/232 (8%)
Query: 105 REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAV 162
REVQ+++ +HPN++ T +D +I +ELC L + + + H +
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLL 124
Query: 163 MKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAI--DFGLSVFFRPGEQ-FNEI 219
+T + + H ++HRDLKP N L + +KA+ DFGL G F+
Sbjct: 125 QQTTSGLAHL-HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 220 VGSPY---YMAPEVL----KRNYGPEVDVWSAGVILYILLC-GVPPFWAETEQGVAQAII 271
G P ++APE+L K N VD++SAG + Y ++ G PF ++ +
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG 243
Query: 272 RSVIDFKRDPWPKVSEN--AKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
+D P+ E+ A++L++KM+ DP++R +A+ VL+HP+ + +K
Sbjct: 244 ACSLDCLH---PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 48/289 (16%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G GEFG + C +G +A K SKK L +VD ++ REV L +H ++V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR----GHYTERAAAAVMKTIVEVVQVCHEQGV 178
+ +D + I E C GG L D I ++ E ++ + ++ H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFG-------LSVFFRPGE----------QFNEIVG 221
+H D+KP N + + S P A + G V F+ G+ Q E G
Sbjct: 135 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE--G 190
Query: 222 SPYYMAPEVLKRNYG--PEVDVWSAGVILYILLCGVPPF------WAETEQGVAQAIIRS 273
++A EVL+ NY P+ D+++ + + + G P W E QG I
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRI--- 246
Query: 274 VIDFKRDPWPKV-SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
P+V S+ +L+K M++PDP++R +A +++H L +A +
Sbjct: 247 ---------PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 48/289 (16%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
++G GEFG + C +G +A K SKK L +VD ++ REV L +H ++V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR----GHYTERAAAAVMKTIVEVVQVCHEQGV 178
+ +D + I E C GG L D I ++ E ++ + ++ H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFG-------LSVFFRPGE----------QFNEIVG 221
+H D+KP N + + S P A + G V F+ G+ Q E G
Sbjct: 135 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE--G 190
Query: 222 SPYYMAPEVLKRNYG--PEVDVWSAGVILYILLCGVPPF------WAETEQGVAQAIIRS 273
++A EVL+ NY P+ D+++ + + + G P W E QG I
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRI--- 246
Query: 274 VIDFKRDPWPKV-SENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
P+V S+ +L+K M++PDP++R +A +++H L +A +
Sbjct: 247 ---------PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXV-NHKNIIS 87
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + +V + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K + LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 45/286 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSI--SKKKLRTAVDIEDVRREVQIMKHLP------- 114
LG+G FG + + +A K I +++KL T + EV ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS------EVMLLASLNHQYVVRY 67
Query: 115 -----KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTER-AAAAVMKTIVE 168
+ N V + S + I ME CE G L+D I + +R + + I+E
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-------------PG-- 213
+ H QG++HRDLKP N ES +K DFGL+ PG
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 214 EQFNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII 271
+ +G+ Y+A EVL +Y ++D++S G+I + ++ PF E+ +
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241
Query: 272 RSV-IDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
RSV I+F D + K +++ +++ DP +R A +L WL
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 355 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGS 414
FLS E +A K AF+M D + G I+ QN + +L ++E D DG G+
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 415 LNYGEFVAVSV-HLKKMA---NDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+++ EF+ + V +K+ A ++E L F FD+N GFI+IEEL L + E+
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEE 132
Query: 471 VINAIMHDVDTDKDGRISYEEFAVMMKA 498
I +M D D + DGRI ++EF MM+
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 53/331 (16%)
Query: 32 VVANGSTVVHRLCVLKEPSGQDISI-DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSIS 90
+++N S +++ +KE +D I DY + R L +G+F LC N +A K
Sbjct: 9 ILSNYSNLIYLNKYVKE---KDKYINDYRIIRTLNQGKFNKIILCEKDNKF--YALKKYE 63
Query: 91 KKKLRTAVDI--------------EDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K L D +D + E+QI+ + K+ ++ + + V+I+
Sbjct: 64 KSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIITNYDEVYIIY 122
Query: 137 ELCEGGEL--FDR--IVARGHYTERAAAAVMKTIVEVV-----QVCHEQGVMHRDLKPEN 187
E E + FD V +YT V+K I++ V + +E+ + HRD+KP N
Sbjct: 123 EYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN 182
Query: 188 FLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL--KRNY-GPEVDVWSA 244
L ++ +K DFG S + ++ G+ +M PE + +Y G +VD+WS
Sbjct: 183 ILMD---KNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 245 GVILYILLCGVPPF-----WAETEQGVAQAIIRSVIDFKRDPWPKVSENAK--------- 290
G+ LY++ V PF E + I +D +P ++ +
Sbjct: 239 GICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNE 298
Query: 291 --DLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
D +K L +P +R+T+E+ L+H WL +
Sbjct: 299 DIDFLKLFLRKNPAERITSEDALKHEWLADT 329
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXV-NHKNIIS 87
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXV-NHKNIIS 87
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 125
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 182
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 183 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 235 YGPEVDVWSAGVIL---------------------YILLCGVP-PFWAETEQGVAQAIIR 272
Y VD+WS G I+ I G P P + + Q + +
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 299
Query: 273 SVIDFKRDPWPKV----------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ + +PK+ + A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 300 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E+V KEAF + D + G I QN EA+L+ +M D DG+
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ + +K N+E + +AF FD++ +GF+ ELR+ + + ++
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEF 492
++ ++ DTD DG+++YEEF
Sbjct: 121 VDEMIRAADTDGDGQVNYEEF 141
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAV 423
++EAF + D + G ++ + + + ++ ++ AAD DGDG +NY EFV V
Sbjct: 85 IREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRV 144
Query: 424 SV 425
V
Sbjct: 145 LV 146
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 435 HLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAV 494
+AFS FD++ G I EL + E + +M ++D D +G + + EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 495 MM 496
MM
Sbjct: 71 MM 72
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 87
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 125
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 182
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 183 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 235 YGPEVDVWSAGVIL---------------------YILLCGVP-PFWAETEQGVAQAIIR 272
Y VD+WS G I+ I G P P + + Q + +
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 299
Query: 273 SVIDFKRDPWPKV----------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ + +PK+ + A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 300 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 80
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKHL-HS 137
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 138 AGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 88
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 145
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 146 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 235 YGPEVDVWSAGVIL---------------------YILLCGVP-PFWAETEQGVAQAIIR 272
Y VD+WS G I+ I G P P + + Q + +
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 262
Query: 273 SVIDFKRDPWPKV----------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ + +PK+ + A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 263 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 88
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 145
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 146 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 235 YGPEVDVWSAGVIL---------------------YILLCGVP-PFWAETEQGVAQAIIR 272
Y VD+WS G I+ I G P P + + Q + +
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 262
Query: 273 SVIDFKRDPWPKV----------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ + +PK+ + A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 263 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 87
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVIL---------------------YILLCGVP-PFWAETEQGVAQAIIR 272
Y VD+WS G I+ I G P P + + Q + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 273 SVIDFKRDPWPKV----------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ + +PK+ + A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 87
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVIL---------------------YILLCGVP-PFWAETEQGVAQAIIR 272
Y VD+WS G I+ I G P P + + Q + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 273 SVIDFKRDPWPKV----------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ + +PK+ + A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 86
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 143
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 144 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 200
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 201 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 260
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 261 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ LS E++ KEAF + D + G I QN E +LQ ++ D DG+
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 413 GSLNYGEFVAV-SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++ + EF+++ + +K +E L +AF FD++++G+I ELR+ + + + ++
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEFAVMM 496
+ ++ + D D DG+++YEEF MM
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMM 145
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAV 423
LKEAF++ D ++ G I+ + + + +++ +++ AD+DGDG +NY EFV +
Sbjct: 85 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
Query: 424 SVHLK 428
+ ++
Sbjct: 145 MMTVR 149
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 80
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 137
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 138 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 81
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 138
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 139 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 235 YGPEVDVWSAGVIL---------------------YILLCGVP-PFWAETEQGVAQAIIR 272
Y VD+WS G I+ I G P P + + Q + +
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 255
Query: 273 SVIDFKRDPWPKV----------------SENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
+ + +PK+ + A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 256 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K + LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+S
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIS 81
Query: 122 L------KDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + T E+ V++VMEL + +++ ER + + + + + + H
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 138
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 139 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 235 YGPEVDVWSAGVIL------YILLCGVPPF--WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ IL G W + + + Q +R+ ++
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 255
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML DP +R++ ++ L+HP++
Sbjct: 256 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K + LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A K+AF D GKI QN EA+LQ L+ A+ + +G L
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 416 NYGEFVAV-SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
N+ EF + + +++ +E + +AF FDR+ GFI ELR + + + ++ I+
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDE 123
Query: 475 IMHDVDTDKDGRISYEEFAVMM 496
++ + D D DG I+YEEF M+
Sbjct: 124 MIREADFDGDGMINYEEFVWMI 145
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 19/222 (8%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSI----SKKKLRTAVDIEDVR 104
P+ D I+Y+ +++G+G FG+ + V + A KS+ S+ + ++ +
Sbjct: 14 PTLADNEIEYE--KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 105 REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAA-VM 163
REV IM +L HPNIV L + +VME G+L+ R++ + H + + +M
Sbjct: 72 REVFIMSNL-NHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 164 KTIVEVVQVCHEQG--VMHRDLKPENFLFANKKESSPL--KAIDFGLSVFFRPGEQFNEI 219
I ++ Q ++HRDL+ N + E++P+ K DFGLS + + +
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGL 186
Query: 220 VGSPYYMAPEVL---KRNYGPEVDVWSAGVILYILLCGVPPF 258
+G+ +MAPE + + +Y + D +S +ILY +L G PF
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 35 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 92
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 149
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 150 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++C F W + + + Q +R+ ++
Sbjct: 207 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 266
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 267 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G + G+ FA K + VD++ RE +++K L H NIV L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHKNIVKLF 73
Query: 124 DTYEDDSAVH--IVMELCEGGELFDRIVARGH---YTERAAAAVMKTIVEVVQVCHEQGV 178
E+ + H ++ME C G L+ + + E V++ +V + E G+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 179 MHRDLKPENFL-FANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR---- 233
+HR++KP N + + S K DFG + EQF + G+ Y+ P++ +R
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 234 -----NYGPEVDVWSAGVILYILLCGVPPF 258
YG VD+WS GV Y G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 24 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 81
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 138
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 139 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++C F W + + + Q +R+ ++
Sbjct: 196 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 255
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 256 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LG+G + G+ FA K + VD++ RE +++K L H NIV L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHKNIVKLF 73
Query: 124 DTYEDDSAVH--IVMELCEGGELFDRIV----ARGHYTERAAAAVMKTIVEVVQVCHEQG 177
E+ + H ++ME C G L+ + A G E V++ +V + E G
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMNHLRENG 132
Query: 178 VMHRDLKPENFL-FANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKR--- 233
++HR++KP N + + S K DFG + EQF + G+ Y+ P++ +R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVL 192
Query: 234 ------NYGPEVDVWSAGVILYILLCGVPPF 258
YG VD+WS GV Y G PF
Sbjct: 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 128/312 (41%), Gaps = 41/312 (13%)
Query: 5 CARPDSSSGKRAKGKKEKPNPFYGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGREL 64
C RP S KG E P+ G Y + + +L G ++ Y++ +
Sbjct: 40 CGRPVGRSDSETKGASEGWCPYCGSPY------SFLPQLN-----PGDIVAGQYEVKGCI 88
Query: 65 GRGEFGVTYLCTDVN-NGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
G G YL D N NG K + A + R Q + + HP+IV +
Sbjct: 89 AHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAER--QFLAEV-VHPSIVQIF 145
Query: 124 DTYE-----DDSAVHIVMELCEGGELFDRIVARGHYTERA-AAAVMKTIVEVVQVCHEQG 177
+ E D +IVME GG+ R ++G A A A + I+ + H G
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLLEILPALSYLHSIG 202
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYGP 237
+++ DLKPEN + ++ LK ID G F + G+P + APE+++
Sbjct: 203 LVYNDLKPENIMLTEEQ----LKLIDLGAVSRI---NSFGYLYGTPGFQAPEIVRTGPTV 255
Query: 238 EVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKML 297
D+++ G L L +P G+ + DP K ++ L+++ +
Sbjct: 256 ATDIYTVGRTLAALTLDLPTRNGRYVDGLPE----------DDPVLKTYDSYGRLLRRAI 305
Query: 298 NPDPKQRLTAEE 309
+PDP+QR T E
Sbjct: 306 DPDPRQRFTTAE 317
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 45/286 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSI--SKKKLRTAVDIEDVRREVQIMKHLP------- 114
LG+G FG + + +A K I +++KL T + EV ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS------EVMLLASLNHQYVVRY 67
Query: 115 -----KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTER-AAAAVMKTIVE 168
+ N V + S + I ME CE L+D I + +R + + I+E
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-------------PG-- 213
+ H QG++HRDLKP N ES +K DFGL+ PG
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 214 EQFNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII 271
+ +G+ Y+A EVL +Y ++D++S G+I + ++ PF E+ +
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241
Query: 272 RSV-IDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
RSV I+F D + K +++ +++ DP +R A +L WL
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 88
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 145
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 146 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 203 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 262
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 263 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++C F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI------EDVRREVQIMKHLP 114
G ++G G FGV Y VNN +++ KKL VDI + +E+++M
Sbjct: 36 GNKMGEGGFGVVYKGY-VNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC- 87
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH---YTERAAAAVMKTIVEVVQ 171
+H N+V L D + +V G L DR+ + + + +
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE------IVGSPYY 225
HE +HRD+K N L E+ K DFGL+ R E+F + IVG+ Y
Sbjct: 148 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQTVMXXRIVGTTAY 201
Query: 226 MAPEVLKRNYGPEVDVWSAGVILYILLCGVP 256
MAPE L+ P+ D++S GV+L ++ G+P
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI------EDVRREVQIMKHLP 114
G ++G G FGV Y VNN +++ KKL VDI + +E+++M
Sbjct: 36 GNKMGEGGFGVVYKGY-VNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC- 87
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH---YTERAAAAVMKTIVEVVQ 171
+H N+V L D + +V G L DR+ + + + +
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE------IVGSPYY 225
HE +HRD+K N L E+ K DFGL+ R E+F + IVG+ Y
Sbjct: 148 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQTVMXSRIVGTTAY 201
Query: 226 MAPEVLKRNYGPEVDVWSAGVILYILLCGVP 256
MAPE L+ P+ D++S GV+L ++ G+P
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++C F W + + + Q +R+ ++
Sbjct: 202 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 75.5 bits (184), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ + D DG+
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ K ++E + +AF FD++ +G+I ELR+ + + ++
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 472 INAIMHDVDTDKDGRISYEEF 492
++ + + D D DG+++YEEF
Sbjct: 122 VDQXIREADIDGDGQVNYEEF 142
Score = 36.2 bits (82), Expect = 0.049, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFV 421
++EAF + D + G I+ + + + ++ + AD+DGDG +NY EFV
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFV 143
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 75.5 bits (184), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I QN EA+LQ + D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 413 GSLNYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++++ EF+ K ++E + +AF FD++ +G+I ELR+ + + ++
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEF 492
++ + + D D DG+++YEEF
Sbjct: 121 VDEXIREADIDGDGQVNYEEF 141
Score = 35.8 bits (81), Expect = 0.057, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFV 421
++EAF + D + G I+ + + + ++ + AD+DGDG +NY EFV
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI------EDVRREVQIMKHLP 114
G ++G G FGV Y VNN +++ KKL VDI + +E+++M
Sbjct: 30 GNKMGEGGFGVVYKGY-VNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC- 81
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH---YTERAAAAVMKTIVEVVQ 171
+H N+V L D + +V G L DR+ + + + +
Sbjct: 82 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE------IVGSPYY 225
HE +HRD+K N L E+ K DFGL+ R E+F + IVG+ Y
Sbjct: 142 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQXVMXXRIVGTTAY 195
Query: 226 MAPEVLKRNYGPEVDVWSAGVILYILLCGVP 256
MAPE L+ P+ D++S GV+L ++ G+P
Sbjct: 196 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 19/222 (8%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSI----SKKKLRTAVDIEDVR 104
P+ D I+Y+ +++G+G FG+ + V + A KS+ S+ + ++ +
Sbjct: 14 PTLADNEIEYE--KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 105 REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAA-VM 163
REV IM +L HPNIV L + +VME G+L+ R++ + H + + +M
Sbjct: 72 REVFIMSNL-NHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 164 KTIVEVVQVCHEQG--VMHRDLKPENFLFANKKESSPL--KAIDFGLSVFFRPGEQFNEI 219
I ++ Q ++HRDL+ N + E++P+ K DFG S + + +
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGL 186
Query: 220 VGSPYYMAPEVL---KRNYGPEVDVWSAGVILYILLCGVPPF 258
+G+ +MAPE + + +Y + D +S +ILY +L G PF
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 75.1 bits (183), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 353 AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGD 412
A+ L+ E++A KEAF + D + G I N EA+LQ + D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 413 GSLNYGEFVAVSVHLKKMAN-DEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV 471
G++N+ EF+ K + +E + +AF FD++ +G+I ELR+ + + ++
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 472 INAIMHDVDTDKDGRISYEEF 492
++ + + D D DG+++YEEF
Sbjct: 121 VDEXIREADIDGDGQVNYEEF 141
Score = 36.2 bits (82), Expect = 0.043, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFV 421
++EAF + D + G I+ + + + ++ + AD+DGDG +NY EFV
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 32 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 89
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 146
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 147 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 204 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 263
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 264 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 19/222 (8%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSI----SKKKLRTAVDIEDVR 104
P+ D I+Y+ +++G+G FG+ + V + A KS+ S+ + ++ +
Sbjct: 14 PTLADNEIEYE--KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 105 REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAA-VM 163
REV IM +L HPNIV L + +VME G+L+ R++ + H + + +M
Sbjct: 72 REVFIMSNL-NHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 164 KTIVEVVQVCHEQG--VMHRDLKPENFLFANKKESSPL--KAIDFGLSVFFRPGEQFNEI 219
I ++ Q ++HRDL+ N + E++P+ K DF LS + + +
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGL 186
Query: 220 VGSPYYMAPEVL---KRNYGPEVDVWSAGVILYILLCGVPPF 258
+G+ +MAPE + + +Y + D +S +ILY +L G PF
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNN-GEKFACKSI--SKKKLRTAVDIED------VRREVQ 108
Y + R + G +G +C V++ G A K + + RT + D V RE++
Sbjct: 24 YTVQRFISSGSYGA--VCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 109 IMKHLPKHPNIVSLKDTYE--DDSAVHIVMELCEGGELFDRIVARGHYTERAAAA----- 161
++ H HPNI+ L+D + ++ A+H +L EL +A+ + +R +
Sbjct: 82 LLNHF-HHPNILGLRDIFVHFEEPAMH---KLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 162 -VMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV 220
M I+ + V HE GV+HRDL P N L A+ + + DF L+ V
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTHYV 194
Query: 221 GSPYYMAPEVLK--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIR------ 272
+Y APE++ + + VD+WSAG ++ + F T I+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 273 ----------SVIDFKRD--------PW----PKVSENAKDLVKKMLNPDPKQRLTAEEV 310
S D+ R+ W P A DL+ KML +P++R++ E+
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 311 LEHPWLQN 318
L HP+ ++
Sbjct: 315 LRHPYFES 322
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNN-GEKFACKSI--SKKKLRTAVDIED------VRREVQ 108
Y + R + G +G +C V++ G A K + + RT + D V RE++
Sbjct: 24 YTVQRFISSGSYGA--VCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 109 IMKHLPKHPNIVSLKDTYE--DDSAVHIVMELCEGGELFDRIVARGHYTERAAAA----- 161
++ H HPNI+ L+D + ++ A+H +L EL +A+ + +R +
Sbjct: 82 LLNHF-HHPNILGLRDIFVHFEEPAMH---KLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 162 -VMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV 220
M I+ + V HE GV+HRDL P N L A+ + + DF L+ V
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTHYV 194
Query: 221 GSPYYMAPEVLK--RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIR------ 272
+Y APE++ + + VD+WSAG ++ + F T I+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 273 ----------SVIDFKRD--------PW----PKVSENAKDLVKKMLNPDPKQRLTAEEV 310
S D+ R+ W P A DL+ KML +P++R++ E+
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 311 LEHPWLQN 318
L HP+ ++
Sbjct: 315 LRHPYFES 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+ +G G G+ D A K +S+ + + RE+ +MK + H NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIIG 87
Query: 122 LKDTY------EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHE 175
L + + E+ V+IVMEL + +++ ER + + + + + + H
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL-HS 144
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEV-LKRN 234
G++HRDLKP N + K LK +DFGL+ V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG 201
Query: 235 YGPEVDVWSAGVILYILLCGVPPF--------WAETEQGVA----------QAIIRSVID 276
Y VD+WS G I+ ++ G F W + + + Q +R+ ++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 277 -------------FKRDPWPKVSEN-------AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
F +P SE+ A+DL+ KML D +R++ +E L+HP++
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I QN EA+LQ ++ DG+G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 416 NYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ +F+ + +K ++E + +AF F ++ +G+I +LR+ + + + ++ ++
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 475 IMHDVDTDKDGRISYEEFAVMMKA 498
++ + D DG+++YE+F MM A
Sbjct: 425 MIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 355 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGS 414
+LS E +A K AF+M D + G I+ Q + +L ++E D DG G+
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 415 LNYGEFVAVSV-HLKKMA---NDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+++ EF+ + V +K+ A ++E L + F FDRN G+I+ EEL SGE
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFR----ASGEH 125
Query: 471 V----INAIMHDVDTDKDGRISYEEFAVMMKA 498
V I ++M D D + DGRI ++EF MM+
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 125
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLK-RN 234
+MHRD+KP N L ++ E +K DFG+S N VG+ YM+PE L+ +
Sbjct: 186 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTH 241
Query: 235 YGPEVDVWSAGVILYILLCG---VPP 257
Y + D+WS G+ L + G +PP
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 131/339 (38%), Gaps = 70/339 (20%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL---- 113
Y++ LG G FG C D G I K + E R E+ +++ +
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK---EAARLEINVLEKINEKD 91
Query: 114 PKHPNI-VSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEVV 170
P + N+ V + D ++ + I EL G FD + + Y + + + V
Sbjct: 92 PDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAV 150
Query: 171 QVCHEQGVMHRDLKPENFLFANKK----------------ESSPLKAIDFGLSVFFRPGE 214
+ H+ + H DLKPEN LF N +S+ ++ +DFG + F E
Sbjct: 151 KFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF--DHE 208
Query: 215 QFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQ--------- 264
+ IV + +Y APEV L+ + DVWS G I++ G F +
Sbjct: 209 HHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERI 268
Query: 265 --GVAQAIIRSVIDFK-----RDPWPK-------VSENAK-----------------DLV 293
+ +IR K R W + V EN K DL+
Sbjct: 269 LGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLI 328
Query: 294 KKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVK 332
+ ML +P +RLT E L+HP+ + P L ++ +
Sbjct: 329 ESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSSR 367
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
+Y + +GRG +G YL D N + A K +++ +D + + RE+ I+ L K
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRL-KS 84
Query: 117 PNIVSLKDTYEDDSAV-----HIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIVEV 169
I+ L D D + +IV+E+ + +LF + TE ++ ++
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEEHIKTILYNLLLG 141
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR----------------PG 213
HE G++HRDLKP N L + +K DFGL+ PG
Sbjct: 142 ENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 214 -------EQFNEIVGSPYYMAPE--VLKRNYGPEVDVWSAGVILYILL 252
+Q V + +Y APE +L+ NY +D+WS G I LL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 272 RSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
R I+ K+ +P +S++ +L++ ML +P +R+T ++ L+HP+L++ +K
Sbjct: 322 RKPINLKQK-YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 90
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YM+PE L
Sbjct: 151 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 202
Query: 232 K-RNYGPEVDVWSAGVILYILLCG---VPP---------FWAETEQGVAQAI-------- 270
+ +Y + D+WS G+ L + G +PP F + E A+
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262
Query: 271 --------------IRSVIDF-KRDPWPKVSENA-----KDLVKKMLNPDPKQRLTAEEV 310
I ++D+ +P PK+ +D V K L +P +R +++
Sbjct: 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 322
Query: 311 LEHPWLQNA 319
+ H +++ +
Sbjct: 323 MVHAFIKRS 331
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 63
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YM+PE L
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 175
Query: 232 K-RNYGPEVDVWSAGVILYILLCG---VPP---------FWAETEQGVAQAI-------- 270
+ +Y + D+WS G+ L + G +PP F + E A+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 271 --------------IRSVIDF-KRDPWPKVSENA-----KDLVKKMLNPDPKQRLTAEEV 310
I ++D+ +P PK+ +D V K L +P +R +++
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 311 LEHPWLQNA 319
+ H +++ +
Sbjct: 296 MVHAFIKRS 304
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 355 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGS 414
+LS E +A K AF+M D + G I+ Q + +L ++E D DG G+
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 415 LNYGEFVAVSV-HLKKMA---NDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGED 470
+++ EF+ + V +K+ A ++E L + F FDRN G+I+ EEL SGE
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFR----ASGEH 125
Query: 471 V----INAIMHDVDTDKDGRISYEEFAVMMKA 498
V I ++M D D + DGRI ++EF MM+
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 63
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YM+PE L
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 175
Query: 232 K-RNYGPEVDVWSAGVILYILLCG---VPP---------FWAETEQGVAQAI-------- 270
+ +Y + D+WS G+ L + G +PP F + E A+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 271 --------------IRSVIDF-KRDPWPKVSENA-----KDLVKKMLNPDPKQRLTAEEV 310
I ++D+ +P PK+ +D V K L +P +R +++
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 311 LEHPWLQNA 319
+ H +++ +
Sbjct: 296 MVHAFIKRS 304
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 63
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YM+PE L
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 175
Query: 232 K-RNYGPEVDVWSAGVILYILLCG---VPP---------FWAETEQGVAQAI-------- 270
+ +Y + D+WS G+ L + G +PP F + E A+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 271 --------------IRSVIDF-KRDPWPKVSENA-----KDLVKKMLNPDPKQRLTAEEV 310
I ++D+ +P PK+ +D V K L +P +R +++
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 311 LEHPWLQNA 319
+ H +++ +
Sbjct: 296 MVHAFIKRS 304
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV + + +G A K I +++ A+ + RE+Q++ H
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 63
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + G E+ V +++ + E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YM+PE L
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 175
Query: 232 K-RNYGPEVDVWSAGVILYILLCG---VPP---------FWAETEQGVAQAI-------- 270
+ +Y + D+WS G+ L + G +PP F + E A+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 271 --------------IRSVIDF-KRDPWPKVSENA-----KDLVKKMLNPDPKQRLTAEEV 310
I ++D+ +P PK+ +D V K L +P +R +++
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 311 LEHPWLQNA 319
+ H +++ +
Sbjct: 296 MVHAFIKRS 304
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 29/270 (10%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSI-----SKKKLRTAVDIEDVRREVQIMKHLPKHP 117
ELGRG +GV V +G+ A K I S+++ R +D++ R V P
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-------P 110
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYT-ERAAAAVMKTIVEVVQVCH 174
V+ + V I MEL + + + +++ +G E + +IV+ ++ H
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 175 EQ-GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL-- 231
+ V+HRD+KP N L + +K DFG+S + G YMAPE +
Sbjct: 171 SKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINP 227
Query: 232 ---KRNYGPEVDVWSAGVILYILLCGVPPF--WAETEQGVAQAIIRSVIDFKRDPWPKVS 286
++ Y + D+WS G+ + L P+ W Q + Q + D K S
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 284
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
D + L + K+R T E+++HP+
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 95 RTAVDIEDVR-REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH 153
R +D D+ E++++ HPN++ + D ++I +ELC L D + ++
Sbjct: 64 RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNV 122
Query: 154 YTERA-------AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK----------ES 196
E ++++ I V H ++HRDLKP+N L + E+
Sbjct: 123 SDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182
Query: 197 SPLKAIDFGLSVFFRPGE-----QFNEIVGSPYYMAPEVL----KRNYGPEVDVWSAGVI 247
+ DFGL G+ N G+ + APE+L KR +D++S G +
Sbjct: 183 LRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
Query: 248 LYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN-----AKDLVKKMLNPDP 301
Y +L G PF + + IIR + F D + + A DL+ +M++ DP
Sbjct: 243 FYYILSKGKHPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDP 298
Query: 302 KQRLTAEEVLEHP--WLQNAK 320
+R TA +VL HP W ++ K
Sbjct: 299 LKRPTAMKVLRHPLFWPKSKK 319
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
LGRG FG + D G F C + KK+R +E R E + P IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTG--FQC---AVKKVR----LEVFRVEELVACAGLSSPRIVPLY 130
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ V+I MEL EGG L I G E A + +E ++ H + ++H D+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRP---GEQF---NEIVGSPYYMAPE-VLKRNYG 236
K +N L ++ + L DFG ++ +P G+ + I G+ +MAPE V+ +
Sbjct: 191 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKM 296
+VD+WS+ ++ +L G P W + +G I S R+ P + +++
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 307
Query: 297 LNPDPKQRLTAEEV 310
L +P R +A E+
Sbjct: 308 LRKEPVHRASAMEL 321
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 95 RTAVDIEDVR-REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH 153
R +D D+ E++++ HPN++ + D ++I +ELC L D + ++
Sbjct: 64 RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNV 122
Query: 154 YTERA-------AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK----------ES 196
E ++++ I V H ++HRDLKP+N L + E+
Sbjct: 123 SDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182
Query: 197 SPLKAIDFGLSVFFRPGE-----QFNEIVGSPYYMAPEVL----KRNYGPEVDVWSAGVI 247
+ DFGL G+ N G+ + APE+L KR +D++S G +
Sbjct: 183 LRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
Query: 248 LYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN-----AKDLVKKMLNPDP 301
Y +L G PF + + IIR + F D + + A DL+ +M++ DP
Sbjct: 243 FYYILSKGKHPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDP 298
Query: 302 KQRLTAEEVLEHP--WLQNAK 320
+R TA +VL HP W ++ K
Sbjct: 299 LKRPTAMKVLRHPLFWPKSKK 319
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 23/251 (9%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL--RTAVDIEDVRREVQIMK 111
++ Y++ + +G+G FG D + A K + +K R A + E++I++
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE------EIRILE 148
Query: 112 HLPKHP-----NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-- 164
HL K N++ + + + + + + EL L++ ++ + + + V K
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFSLPLVRKFA 206
Query: 165 -TIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP 223
+I++ + H+ ++H DLKPEN L + S +K IDFG S + ++ + S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTXIQSR 263
Query: 224 YYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPW 282
+Y APEV L YG +D+WS G IL LL G P E E G A + ++
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMPSQKL 322
Query: 283 PKVSENAKDLV 293
S+ AK+ V
Sbjct: 323 LDASKRAKNFV 333
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQ 317
D +K+ L DP R+T + L HPWL+
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
++ Y++ + +G+G FG D + A K + +K E++R I++HL
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----ILEHL 150
Query: 114 PKHP-----NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK---T 165
K N++ + + + + + + EL L++ ++ + + + V K +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFSLPLVRKFAHS 208
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYY 225
I++ + H+ ++H DLKPEN L + S +K IDFG S + ++ + S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTXIQSRFY 265
Query: 226 MAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
APEV L YG +D+WS G IL LL G P E E G A + ++
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMPSQKLLD 324
Query: 285 VSENAKDLV 293
S+ AK+ V
Sbjct: 325 ASKRAKNFV 333
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKAR 334
D +K+ L DP R+T + L HPWL+ ++ P GE +
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR--RRLPKPPTGEKTSVK 428
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+E+G G+FG+ +L +N +K A K+I + A+ ED E ++M L HP +V
Sbjct: 13 QEIGSGQFGLVHLGYWLNK-DKVAIKTIREG----AMSEEDFIEEAEVMMKL-SHPKLVQ 66
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + + + +V E E G L D + RG + + + E + E V+H
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIH 126
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVLK-RNYG 236
RDL N L E+ +K DFG++ F +Q+ G+ + + +PEV Y
Sbjct: 127 RDLAARNCLVG---ENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 237 PEVDVWSAGVILY 249
+ DVWS GV+++
Sbjct: 183 SKSDVWSFGVLMW 195
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 54 ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
++ Y++ + +G+G FG D + A K + +K E++R I++HL
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----ILEHL 150
Query: 114 PKHP-----NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK---T 165
K N++ + + + + + + EL L++ ++ + + + V K +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFSLPLVRKFAHS 208
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYY 225
I++ + H+ ++H DLKPEN L + S +K IDFG S + ++ + S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYXXIQSRFY 265
Query: 226 MAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
APEV L YG +D+WS G IL LL G P E E G A + ++
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMPXQKLLD 324
Query: 285 VSENAKDLV 293
S+ AK+ V
Sbjct: 325 ASKRAKNFV 333
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 291 DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKAR 334
D +K+ L DP R+T + L HPWL+ ++ P GE +
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR--RRLPKPPTGEKTSVK 428
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 324 NVSLGETVKARLKQFSVMNKLKKRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXX 383
+V L T+ LK F N+LKK AL ++A+ L E+ L+ F +D + G ++
Sbjct: 19 HVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQE 78
Query: 384 XXX-XXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSF 442
Q IP D+ ++ D + G ++Y +F+A ++ + E F F
Sbjct: 79 ILDGLKKIGYQKIP-PDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKF 137
Query: 443 FDRNRSGFIEIEELRNALN-DEVDTSGED-VINAIMHDVDTDKDGRISYEEFAVMM 496
FD + +G I +EEL+ D+++ D I++++ +VD + DG I + EF +MM
Sbjct: 138 FDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 29/270 (10%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSI-----SKKKLRTAVDIEDVRREVQIMKHLPKHP 117
ELGRG +GV V +G+ A K I S+++ R +D++ R V P
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-------P 66
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYT-ERAAAAVMKTIVEVVQVCH 174
V+ + V I MEL + + + +++ +G E + +IV+ ++ H
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 175 EQ-GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL-- 231
+ V+HRD+KP N L + +K DFG+S + + G YMAPE +
Sbjct: 127 SKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 232 ---KRNYGPEVDVWSAGVILYILLCGVPPF--WAETEQGVAQAIIRSVIDFKRDPWPKVS 286
++ Y + D+WS G+ + L P+ W Q + Q + D K S
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 240
Query: 287 ENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
D + L + K+R T E+++HP+
Sbjct: 241 AEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 135/323 (41%), Gaps = 78/323 (24%)
Query: 61 GRELGRGEFGVTYLCTDVNNGEK--FACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPN 118
G ++GRG +G Y + + +A K I T + + R E+ +++ L KHPN
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG----TGISMSACR-EIALLREL-KHPN 79
Query: 119 IVSLKDTY--EDDSAVHIVMELCEGGELFDRIVARGHYTERA-----------AAAVMKT 165
++SL+ + D V ++ + E +L+ + + H +A +++
Sbjct: 80 VISLQKVFLSHADRKVWLLFDYAEH-DLWH--IIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANK-KESSPLKAIDFGLSVFF----RPGEQFNEIV 220
I++ + H V+HRDLKP N L + E +K D G + F +P + +V
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 221 GSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPF-------------------- 258
+ +Y APE+L R+Y +D+W+ G I LL P F
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256
Query: 259 ------------WAETEQGVAQAIIRSVIDFKRDPWPKVS-------------ENAKDLV 293
W + ++ + + DF+R+ + S A L+
Sbjct: 257 IFNVMGFPADKDWEDIKKMPEHSTLMK--DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLL 314
Query: 294 KKMLNPDPKQRLTAEEVLEHPWL 316
+K+L DP +R+T+E+ ++ P+
Sbjct: 315 QKLLTMDPIKRITSEQAMQDPYF 337
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 132/343 (38%), Gaps = 99/343 (28%)
Query: 63 ELGRGEFGVTYLCT---DVNNGEKFACKSI--SKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++G G F YL T V EK A K + + +R A E+Q +
Sbjct: 28 KIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA-------ELQCLTVAGGQD 80
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG 177
N++ +K + + V I M E D + + R M + + ++ H+ G
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVRE---YMLNLFKALKRIHQFG 137
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGL-----------------------------SV 208
++HRD+KP NFL+ + + L +DFGL S+
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSI 195
Query: 209 FFRPGEQFNEIVGSPYYMAPEVLKR--NYGPEVDVWSAGVILYILLCGVPPFWAETEQGV 266
+Q G+P + APEVL + N +D+WSAGVI LL G PF+ ++
Sbjct: 196 CLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255
Query: 267 AQAII-----------------RSVIDFKRDP---------------------------- 281
A A I +S++ K P
Sbjct: 256 ALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGH 315
Query: 282 ------WPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQN 318
W +V + A DL+ K+L+ +P R+TAEE L HP+ ++
Sbjct: 316 ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+E+G G+FG+ +L +N +K A K+I + A+ ED E ++M L HP +V
Sbjct: 16 QEIGSGQFGLVHLGYWLNK-DKVAIKTIREG----AMSEEDFIEEAEVMMKL-SHPKLVQ 69
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + + + +V E E G L D + RG + + + E + E V+H
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVLK-RNYG 236
RDL N L E+ +K DFG++ F +Q+ G+ + + +PEV Y
Sbjct: 130 RDLAARNCLVG---ENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 237 PEVDVWSAGVILY 249
+ DVWS GV+++
Sbjct: 186 SKSDVWSFGVLMW 198
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 10 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 58
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + A + + + +
Sbjct: 59 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 116
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFNEIVGS 222
+ H + ++HRDLK N E + +K DFGL+ + QF ++ GS
Sbjct: 117 TARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 223 PYYMAPEVLKRN----YGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV++ Y + DV++ G++LY L+ G P+
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+E+G G+FG+ +L +N +K A K+I + A+ ED E ++M L HP +V
Sbjct: 13 QEIGSGQFGLVHLGYWLNK-DKVAIKTIREG----AMSEEDFIEEAEVMMKL-SHPKLVQ 66
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + + + +V E E G L D + RG + + + E + E V+H
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 126
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVLK-RNYG 236
RDL N L E+ +K DFG++ F +Q+ G+ + + +PEV Y
Sbjct: 127 RDLAARNCLVG---ENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 237 PEVDVWSAGVILY 249
+ DVWS GV+++
Sbjct: 183 SKSDVWSFGVLMW 195
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 45/286 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSI--SKKKLRTAVDIEDVRREVQIMKHLP------- 114
LG+G FG + + +A K I +++KL T + EV ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS------EVXLLASLNHQYVVRY 67
Query: 115 -----KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTER-AAAAVMKTIVE 168
+ N V + S + I E CE L+D I + +R + + I+E
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR-------------PG-- 213
+ H QG++HR+LKP N ES +K DFGL+ PG
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 214 EQFNEIVGSPYYMAPEVL--KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAII 271
+ +G+ Y+A EVL +Y ++D +S G+I + + PF E+ +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKKL 241
Query: 272 RSV-IDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
RSV I+F D + K +++ +++ DP +R A +L WL
Sbjct: 242 RSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+E+G G+FG+ +L +N +K A K+I + A+ ED E ++M L HP +V
Sbjct: 14 QEIGSGQFGLVHLGYWLNK-DKVAIKTIREG----AMSEEDFIEEAEVMMKL-SHPKLVQ 67
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + + + +V E E G L D + RG + + + E + E V+H
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVLK-RNYG 236
RDL N L E+ +K DFG++ F +Q+ G+ + + +PEV Y
Sbjct: 128 RDLAARNCLVG---ENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 237 PEVDVWSAGVILY 249
+ DVWS GV+++
Sbjct: 184 SKSDVWSFGVLMW 196
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G FG + +G+ + K R + E REV+ + L H NIV
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIK-------RVKYNNEKAEREVKALAKLD-HVNIVHYN 70
Query: 124 ---DTYEDD-------------SAVHIVMELCEGGELFDRIVAR-GHYTERAAA-AVMKT 165
D ++ D + I ME C+ G L I R G ++ A + +
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYY 225
I + V H + +++RDLKP N + K+ +K DFGL + + G+ Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 226 MAPE-VLKRNYGPEVDVWSAGVILYILL--CGVPPFWAETEQGVAQAIIRSVIDFKRDPW 282
M+PE + ++YG EVD+++ G+IL LL C ++ + II + D K
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKE--- 244
Query: 283 PKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
K L++K+L+ P+ R E+L L KK+P
Sbjct: 245 -------KTLLQKLLSKKPEDRPNTSEILRT--LTVWKKSP 276
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+E+G G+FG+ +L +N +K A K+I + A+ ED E ++M L HP +V
Sbjct: 11 QEIGSGQFGLVHLGYWLNK-DKVAIKTIREG----AMSEEDFIEEAEVMMKL-SHPKLVQ 64
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + + + +V E E G L D + RG + + + E + E V+H
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVLK-RNYG 236
RDL N L E+ +K DFG++ F +Q+ G+ + + +PEV Y
Sbjct: 125 RDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 237 PEVDVWSAGVILY 249
+ DVWS GV+++
Sbjct: 181 SKSDVWSFGVLMW 193
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+G G FG + +G+ + + R + E REV+ + L H NIV
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIR-------RVKYNNEKAEREVKALAKLD-HVNIVHYN 71
Query: 124 DTYE---------DDS--------------------AVHIVMELCEGGELFDRIVAR-GH 153
++ DDS + I ME C+ G L I R G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 154 YTERAAA-AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRP 212
++ A + + I + V H + ++HRDLKP N + K+ +K DFGL +
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKN 188
Query: 213 GEQFNEIVGSPYYMAPE-VLKRNYGPEVDVWSAGVILYILL--CGVPPFWAETEQGVAQA 269
+ G+ YM+PE + ++YG EVD+++ G+IL LL C ++ +
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 248
Query: 270 IIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAP 323
II + D K K L++K+L+ P+ R E+L L KK+P
Sbjct: 249 IISDIFDKKE----------KTLLQKLLSKKPEDRPNTSEILRT--LTVWKKSP 290
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 22 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 70
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + A + + + +
Sbjct: 71 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV---FFRPGEQFNEIVGS 222
+ H + ++HRDLK N E + +K DFGL+ + QF ++ GS
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 223 PYYMAPEVLKRN----YGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV++ Y + DV++ G++LY L+ G P+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 44/265 (16%)
Query: 95 RTAVDIEDVR-REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH 153
R +D D+ E++++ HPN++ + D ++I +ELC L D + ++
Sbjct: 46 RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNV 104
Query: 154 YTERA-------AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK----------ES 196
E ++++ I V H ++HRDLKP+N L + E+
Sbjct: 105 SDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164
Query: 197 SPLKAIDFGLSVFFRPGEQ-----FNEIVGSPYYMAPEVL--------KRNYGPEVDVWS 243
+ DFGL G+ N G+ + APE+L KR +D++S
Sbjct: 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 244 AGVILYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN-----AKDLVKKML 297
G + Y +L G PF + + IIR + F D + + A DL+ +M+
Sbjct: 225 MGCVFYYILSKGKHPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMI 280
Query: 298 NPDPKQRLTAEEVLEHP--WLQNAK 320
+ DP +R TA +VL HP W ++ K
Sbjct: 281 DHDPLKRPTAMKVLRHPLFWPKSKK 305
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+GRG FG + D G F C + KK+R +E R E + P IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTG--FQC---AVKKVR----LEVFRVEELVACAGLSSPRIVPLY 116
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ V+I MEL EGG L I G E A + +E ++ H + ++H D+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRP---GEQF---NEIVGSPYYMAPE-VLKRNYG 236
K +N L ++ + L DFG ++ +P G+ + I G+ +MAPE V+ +
Sbjct: 177 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKM 296
+VD+WS+ ++ +L G P W + +G I S R+ P + +++
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 293
Query: 297 LNPDPKQRLTAEEV 310
L +P R +A E+
Sbjct: 294 LRKEPVHRASAMEL 307
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 44/265 (16%)
Query: 95 RTAVDIEDVR-REVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH 153
R +D D+ E++++ HPN++ + D ++I +ELC L D + ++
Sbjct: 46 RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNV 104
Query: 154 YTERA-------AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK----------ES 196
E ++++ I V H ++HRDLKP+N L + E+
Sbjct: 105 SDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164
Query: 197 SPLKAIDFGLSVFFRPGE-----QFNEIVGSPYYMAPEVL--------KRNYGPEVDVWS 243
+ DFGL G+ N G+ + APE+L KR +D++S
Sbjct: 165 LRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 244 AGVILYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSEN-----AKDLVKKML 297
G + Y +L G PF + + IIR + F D + + A DL+ +M+
Sbjct: 225 MGCVFYYILSKGKHPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMI 280
Query: 298 NPDPKQRLTAEEVLEHP--WLQNAK 320
+ DP +R TA +VL HP W ++ K
Sbjct: 281 DHDPLKRPTAMKVLRHPLFWPKSKK 305
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 132 VHIVMELCEGGELFDRIVARGHYTERAAAAVMKT---IVEVVQVCHEQGVMHRDLKPENF 188
++I M+LC L D + R +R + I E V+ H +G+MHRDLKP N
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI 195
Query: 189 LFANKKESSPLKAIDFGLSVFFRPGEQFNEI-------------VGSPYYMAPEVLK-RN 234
F +K DFGL E+ + VG+ YM+PE + N
Sbjct: 196 FFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN 252
Query: 235 YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKD--- 291
Y +VD++S G+IL+ LL F + E+ +R + D + +P +
Sbjct: 253 YSHKVDIFSLGLILFELLYS---FSTQMER------VRIITDVRNLKFPLLFTQKYPQEH 303
Query: 292 -LVKKMLNPDPKQRLTAEEVLEHPWLQN 318
+V+ ML+P P +R A +++E+ +N
Sbjct: 304 MMVQDMLSPSPTERPEATDIIENAIFEN 331
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 50 SGQD--ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
SGQ+ + + Y +GR +G G FGV + T++ N ++ A K ++ A + D R
Sbjct: 2 SGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTY 59
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVH--IVMELCEGGELFDRIVARGH-YTERAAAAVMK 164
+++ PN+ Y +H +V++L G L D + G ++ + A K
Sbjct: 60 KLLAGCTGIPNVY-----YFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAK 113
Query: 165 TIVEVVQVCHEQGVMHRDLKPENFLFA--NKKESSPLKAIDFGLSVFFR--------PGE 214
++ VQ HE+ +++RD+KP+NFL N K ++ + +DFG+ F+R P
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYR 173
Query: 215 QFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPF 258
+ + G+ YM+ L R D+ + G + L G P+
Sbjct: 174 EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLK 123
+GRG FG + D G F C + KK+R +E R E + P IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTG--FQC---AVKKVR----LEVFRVEELVACAGLSSPRIVPLY 132
Query: 124 DTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMHRDL 183
+ V+I MEL EGG L I G E A + +E ++ H + ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 184 KPENFLFANKKESSPLKAIDFGLSVFFRP---GEQF---NEIVGSPYYMAPE-VLKRNYG 236
K +N L ++ + L DFG ++ +P G+ + I G+ +MAPE V+ +
Sbjct: 193 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKM 296
+VD+WS+ ++ +L G P W + +G I S R+ P + +++
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 309
Query: 297 LNPDPKQRLTAEEV 310
L +P R +A E+
Sbjct: 310 LRKEPVHRASAMEL 323
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 22 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 70
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + A + + + +
Sbjct: 71 VGVLRK-TRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV---FFRPGEQFNEIVGS 222
+ H + ++HRDLK N E + +K DFGL+ + QF ++ GS
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 223 PYYMAPEVLKRN----YGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV++ Y + DV++ G++LY L+ G P+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 50 SGQD--ISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
SGQ+ + + Y +GR +G G FGV + T++ N ++ A K ++ A + D R
Sbjct: 1 SGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTY 58
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVH--IVMELCEGGELFDRIVARGH-YTERAAAAVMK 164
+++ PN+ Y +H +V++L G L D + G ++ + A K
Sbjct: 59 KLLAGCTGIPNVY-----YFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAK 112
Query: 165 TIVEVVQVCHEQGVMHRDLKPENFLFA--NKKESSPLKAIDFGLSVFFR--------PGE 214
++ VQ HE+ +++RD+KP+NFL N K ++ + +DFG+ F+R P
Sbjct: 113 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYR 172
Query: 215 QFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPF 258
+ + G+ YM+ L R D+ + G + L G P+
Sbjct: 173 EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 51 GQDISIDYDL-------GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIE 101
G D S D+++ G+ +G G FG Y G+ ++ + T ++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQ 54
Query: 102 DVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAA 160
+ EV +++ +H NI+ L Y + IV + CEG L+ + + +
Sbjct: 55 AFKNEVGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 112
Query: 161 AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFN 217
+ + + + H + ++HRDLK N E +K DFGL+ + QF
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 218 EIVGSPYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
++ GS +MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 51 GQDISIDYDL-------GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIE 101
G D S D+++ G+ +G G FG Y G+ ++ + T ++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQ 54
Query: 102 DVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAA 160
+ EV +++ +H NI+ L Y + IV + CEG L+ + + +
Sbjct: 55 AFKNEVGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 112
Query: 161 AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFN 217
+ + + + H + ++HRDLK N E +K DFGL+ + QF
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 218 EIVGSPYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
++ GS +MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVS 121
+E+G G+FG+ +L +N +K A K+I + + +D E ++M L HP +V
Sbjct: 33 QEIGSGQFGLVHLGYWLNK-DKVAIKTIKEGSMSE----DDFIEEAEVMMKL-SHPKLVQ 86
Query: 122 LKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
L + + + +V E E G L D + RG + + + E + E V+H
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 146
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVLK-RNYG 236
RDL N L E+ +K DFG++ F +Q+ G+ + + +PEV Y
Sbjct: 147 RDLAARNCLVG---ENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 237 PEVDVWSAGVILY 249
+ DVWS GV+++
Sbjct: 203 SKSDVWSFGVLMW 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 33 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 81
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 82 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 140 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 34 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 82
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 83 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 6 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 54
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 55 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 8 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 56
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 57 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 114
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 115 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 393 QNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRS 448
QN +LQ +++ D DG G++++ EF+ + V K +E L F FD+N
Sbjct: 50 QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNAD 109
Query: 449 GFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
G+I++EEL+ L +T ED I +M D D + DGRI Y+EF MK
Sbjct: 110 GYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 6 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 54
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 55 VGVLRK-TRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI------EDVRREVQIMKHLP 114
G + G G FGV Y VNN +++ KKL VDI + +E+++
Sbjct: 27 GNKXGEGGFGVVYKGY-VNN------TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKC- 78
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH---YTERAAAAVMKTIVEVVQ 171
+H N+V L D + +V G L DR+ + + + +
Sbjct: 79 QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 172 VCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF------NEIVGSPYY 225
HE +HRD+K N L E+ K DFGL+ R E+F + IVG+ Y
Sbjct: 139 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQXVXXSRIVGTTAY 192
Query: 226 MAPEVLKRNYGPEVDVWSAGVILYILLCGVP 256
APE L+ P+ D++S GV+L ++ G+P
Sbjct: 193 XAPEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 51 GQDISI---DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
G D+ I D ++ ++G G FG + +G A K + ++ A + + REV
Sbjct: 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFH-AERVNEFLREV 85
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIV----ARGHYTERAAAAVM 163
IMK L +HPNIV + IV E G L+ R++ AR ER ++
Sbjct: 86 AIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMA 143
Query: 164 KTIVEVVQVCHEQG--VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF---NE 218
+ + + H + ++HRDLK N L K +K DFGLS F
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYT---VKVCDFGLSRL--KASXFLXSKX 198
Query: 219 IVGSPYYMAPEVLKRNYGPE-VDVWSAGVILYIL 251
G+P +MAPEVL+ E DV+S GVIL+ L
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 34 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 82
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 83 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV---FFRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 26 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 74
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 75 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV---FFRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 133 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 49 PSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR--TAVDIEDVRRE 106
P GQ +G+ +G G FG Y G+ ++ + T ++ + E
Sbjct: 6 PDGQ-----ITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNE 54
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKT 165
V +++ +H NI+ L Y + IV + CEG L+ + + + + +
Sbjct: 55 VGVLRK-TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV---FFRPGEQFNEIVGS 222
+ + H + ++HRDLK N E +K DFGL+ + QF ++ GS
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 223 PYYMAPEVL----KRNYGPEVDVWSAGVILYILLCGVPPF 258
+MAPEV+ K Y + DV++ G++LY L+ G P+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 393 QNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMAND------EHLHKAFSFFDRN 446
QN +LQ +++ D DG G++++ EF+ + V + M +D E L F FD+N
Sbjct: 50 QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RSMKDDSKGKTEEELSDLFRMFDKN 107
Query: 447 RSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
G+I++EEL+ L +T ED I +M D D + DGRI Y+EF MK
Sbjct: 108 ADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 328 GETVKARLKQFSVMNKLKKRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXX 387
G V K + ++ K +K A+ ++A+ + +V LK F ++D + +G I
Sbjct: 18 GIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKG 77
Query: 388 XXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNR 447
+P + +L++ D DG G ++Y EF+A ++ K+++ + ++ AF FD +
Sbjct: 78 LEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDN 135
Query: 448 SGFIEIEELRNAL---NDEVDTSGEDV--INAIMHDVDTDKDGRISYEEFAVMMK 497
G I EL + L N + + + DV + ++ DVD + DG+I + EF+ MMK
Sbjct: 136 DGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 393 QNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRS 448
QN +LQ +++ D DG G++++ EF+ + V K ++E L F FD+N
Sbjct: 50 QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNAD 109
Query: 449 GFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
G+I++EEL+ L +T ED I +M D D + DGRI Y+EF MK
Sbjct: 110 GYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y V +K++ K +++E+ +E +MK + KH
Sbjct: 33 DITMKHKLGGGQYGEVY----VGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 87
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +IV E G L D R R T + I ++
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 148 KKNFIHRDLAARNCLVG---ENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 203
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I+ + EA++ LM DVDG+ +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 416 NYGEFVAV-SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
+ EF+A+ S LK +++ L +AF FD+N G I EL++ L + GE + +A
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT----SIGEKLTDA 120
Query: 475 IMHDV---DTDKDGRISYEEFAVMMKAGTDW---RKASR 507
+ D+ +D G I+ ++FA ++ G+ RKA R
Sbjct: 121 EVDDMLREVSDGSGEINIQQFAALLSKGSSTGTRRKALR 159
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D++ ELG G GV +G A K I +++ A+ + RE+Q++ H
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLI-HLEIKPAIR-NQIIRELQVL-HECNS 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQ 176
P IV + D + I ME +GG L + E V ++ + E+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF----NEIVGSPYYMAPEVL 231
+MHRD+KP N L ++ E +K DFG+S G+ N VG+ YMAPE L
Sbjct: 134 HQIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERL 185
Query: 232 K-RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVID 276
+ +Y + D+WS G+ L L G P + + R V+D
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVD 231
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 14/262 (5%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
E+GRG F Y D + A + +KL T + + + E + +K L +HPNIV
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGL-QHPNIVRF 90
Query: 123 KDTYEDD----SAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCHEQG- 177
D++E + +V EL G L + + + + I++ +Q H +
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTP 150
Query: 178 -VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVLKRNYG 236
++HRDLK +N + +K D GL+ R ++G+P + APE + Y
Sbjct: 151 PIIHRDLKCDNIFITGP--TGSVKIGDLGLATLKRASFA-KAVIGTPEFXAPEXYEEKYD 207
Query: 237 PEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVS-ENAKDLVKK 295
VDV++ G P+ +E Q AQ R K + KV+ K++++
Sbjct: 208 ESVDVYAFGXCXLEXATSEYPY-SEC-QNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265
Query: 296 MLNPDPKQRLTAEEVLEHPWLQ 317
+ + +R + +++L H + Q
Sbjct: 266 CIRQNKDERYSIKDLLNHAFFQ 287
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
Y D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 22 YVDPHTFEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 66
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 125
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---N 181
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGLS P + G P + +PE + R + DVWS G++L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAV 263
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 51 GQDISI---DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
G D+ I D ++ ++G G FG + +G A K + ++ A + + REV
Sbjct: 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFH-AERVNEFLREV 85
Query: 108 QIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIV----ARGHYTERAAAAVM 163
IMK L +HPNIV + IV E G L+ R++ AR ER ++
Sbjct: 86 AIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMA 143
Query: 164 KTIVEVVQVCHEQG--VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF---NE 218
+ + + H + ++HR+LK N L K +K DFGLS F
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT---VKVCDFGLSRL--KASTFLSSKS 198
Query: 219 IVGSPYYMAPEVLKRNYGPE-VDVWSAGVILYIL 251
G+P +MAPEVL+ E DV+S GVIL+ L
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
Y D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 22 YVDPHTYEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 66
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 125
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---N 181
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGLS P + G P + +PE + R + DVWS G++L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAV 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
Y D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 20 YVDPHTYEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 64
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 65 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 123
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 124 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---N 179
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGLS P + G P + +PE + R + DVWS G++L+
Sbjct: 180 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 239
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 240 EVMSYGERPYWEMSNQDVIKAV 261
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 112/258 (43%), Gaps = 39/258 (15%)
Query: 32 VVANGST-VVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSIS 90
+V GST VH KE +ISID + +G GEFG +V +G K S
Sbjct: 14 LVPRGSTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---LKLPS 58
Query: 91 KKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCE 140
KK++ A+ E RR E IM HPNI+ L+ V IV E E
Sbjct: 59 KKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYME 117
Query: 141 GGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSP 198
G L D + + +T +++ I ++ + G +HRDL N L +
Sbjct: 118 NGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLV 173
Query: 199 LKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-ILL 252
K DFGLS P + G P + +PE + R + DVWS G++L+ ++
Sbjct: 174 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
Query: 253 CGVPPFWAETEQGVAQAI 270
G P+W + Q V +A+
Sbjct: 234 YGERPYWEMSNQDVIKAV 251
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
Y D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 22 YVDPHTYEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 66
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 125
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 126 EXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---N 181
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGLS P + G P + +PE + R + DVWS G++L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAV 263
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 66
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + + I ++
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ F G+ + + APE L
Sbjct: 127 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESL 182
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
+ D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 22 FVDPHTFEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 66
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 125
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 126 EXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI---N 181
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGLS P + G P + +PE + R + DVWS G++L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAV 263
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 61 GRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIV 120
G LG+G FG T GE K + + T +EV++M+ L +HPN++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCL-EHPNVL 70
Query: 121 SLKDTYEDDSAVHIVMELCEGGELFDRIVAR-GHYTERAAAAVMKTIVEVVQVCHEQGVM 179
D ++ + E +GG L I + Y + K I + H ++
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 180 HRDLKPENFLFANKKESSPLKAIDFGLSVFF--------------RPG-EQFNEIVGSPY 224
HRDL N L +E+ + DFGL+ +P ++ +VG+PY
Sbjct: 131 HRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 225 YMAPEVLK-RNYGPEVDVWSAGVIL 248
+MAPE++ R+Y +VDV+S G++L
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 14 DITMKHKLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I++E G L D R R + + I ++
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
+ D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 22 FVDPHTFEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 66
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 125
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI---N 181
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGLS P + G P + +PE + R + DVWS G++L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAV 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I++E G L D R R + + I ++
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 43/278 (15%)
Query: 49 PSGQDISID---YDLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKK 93
PS +D I +LGR +G G+FG DV+ G + CK+ +
Sbjct: 380 PSTRDYEIQRERIELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 94 LRTAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH 153
+R E +E M+ HP+IV L ++ V I+MELC GEL + R
Sbjct: 434 VR-----EKFLQEALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKF 486
Query: 154 YTERAAAAVMK-TIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRP 212
+ A+ + + + + +HRD+ N L ++ + +K DFGLS +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMED 543
Query: 213 GEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQ 268
+ G P +MAPE + R + DVW GV ++ IL+ GV PF QGV
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKN 598
Query: 269 A-IIRSVIDFKRDPW-PKVSENAKDLVKKMLNPDPKQR 304
+I + + +R P P L+ K DP +R
Sbjct: 599 NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ +G+G FG D E A K I KK + + EV++++ + KH
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHD 111
Query: 118 N-----IVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARG---HYTERAAAAVMKTIV 167
IV LK + + + +V E+ +L RG + T + A + ++
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ E ++H DLKPEN L N K S+ +K +DFG S + G++ + + S +Y +
Sbjct: 172 FLA--TPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQXIQSRFYRS 226
Query: 228 PEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETE 263
PEV L Y +D+WS G IL + G P F E
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
+ D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 22 FVDPHTFEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 66
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 125
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---N 181
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGLS P + G P + +PE + R + DVWS G++L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAV 263
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ +G+G FG D E A K I KK + + EV++++ + KH
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHD 92
Query: 118 N-----IVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARG---HYTERAAAAVMKTIV 167
IV LK + + + +V E+ +L RG + T + A + ++
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 152
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ E ++H DLKPEN L N K S+ +K +DFG S + G++ + + S +Y +
Sbjct: 153 FLA--TPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSC--QLGQRIYQXIQSRFYRS 207
Query: 228 PEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETE 263
PEV L Y +D+WS G IL + G P F E
Sbjct: 208 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 110/254 (43%), Gaps = 39/254 (15%)
Query: 36 GST-VVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL 94
GST VH KE +ISID + +G GEFG +V +G K SKK++
Sbjct: 1 GSTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---LKLPSKKEI 45
Query: 95 RTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGEL 144
A+ E RR E IM HPNI+ L+ V IV E E G L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL 104
Query: 145 FDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAI 202
D + + +T +++ I ++ + G +HRDL N L + K
Sbjct: 105 -DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 160
Query: 203 DFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVP 256
DFGLS P + G P + +PE + R + DVWS G++L+ ++ G
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 257 PFWAETEQGVAQAI 270
P+W + Q V +A+
Sbjct: 221 PYWEMSNQDVIKAV 234
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 38/260 (14%)
Query: 29 DEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKS 88
D + + + VH KE +ISID + +G GEFG +V +G K
Sbjct: 24 DPHTYEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---LKL 68
Query: 89 ISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMEL 138
SKK++ A+ E RR E IM HPNI+ L+ V IV E
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEY 127
Query: 139 CEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKES 196
E G L D + + +T +++ I ++ + G +HRDL N L +
Sbjct: 128 MENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSN 183
Query: 197 SPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-I 250
K DFGLS P + G P + +PE + R + DVWS G++L+ +
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 251 LLCGVPPFWAETEQGVAQAI 270
+ G P+W + Q V +A+
Sbjct: 244 MSYGERPYWEMSNQDVIKAV 263
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 118/278 (42%), Gaps = 43/278 (15%)
Query: 49 PSGQDISID---YDLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKK 93
PS +D I +LGR +G G+FG DV+ G + CK+ +
Sbjct: 380 PSTRDYEIQRERIELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 94 LRTAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH 153
+R E +E M+ HP+IV L ++ V I+MELC GEL + R
Sbjct: 434 VR-----EKFLQEALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKF 486
Query: 154 YTERAAAAVMK-TIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRP 212
+ A+ + + + + +HRD+ N L + + +K DFGLS +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---ATDCVKLGDFGLSRYMED 543
Query: 213 GEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQ 268
+ G P +MAPE + R + DVW GV ++ IL+ GV PF QGV
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKN 598
Query: 269 A-IIRSVIDFKRDPW-PKVSENAKDLVKKMLNPDPKQR 304
+I + + +R P P L+ K DP +R
Sbjct: 599 NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 636
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 110/254 (43%), Gaps = 39/254 (15%)
Query: 36 GST-VVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL 94
GST VH KE +ISID + +G GEFG +V +G K SKK++
Sbjct: 1 GSTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---LKLPSKKEI 45
Query: 95 RTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGEL 144
A+ E RR E IM HPNI+ L+ V IV E E G L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL 104
Query: 145 FDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAI 202
D + + +T +++ I ++ + G +HRDL N L + K
Sbjct: 105 -DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVS 160
Query: 203 DFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVP 256
DFGLS P + G P + +PE + R + DVWS G++L+ ++ G
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 257 PFWAETEQGVAQAI 270
P+W + Q V +A+
Sbjct: 221 PYWEMSNQDVIKAV 234
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + + I ++
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 189
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 105/252 (41%), Gaps = 19/252 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSI-SKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+G GEFG G+K +C +I + K T + E IM +HPNI+ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNIIRL 82
Query: 123 KDTYEDDSAVHIVMELCEGGEL--FDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + V I+ E E G L F R+ G +T +++ I ++ E +H
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFR-----PGEQFNEIVGSPY-YMAPEVLK-R 233
RDL N L + K DFGLS F P E + P + APE + R
Sbjct: 142 RDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 234 NYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
+ D WS G++++ ++ G P+W + Q V AI + D++ P P + L
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSLHQL 255
Query: 293 VKKMLNPDPKQR 304
+ D R
Sbjct: 256 MLDCWQKDRNAR 267
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 18 ELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVR-----EKFLQE 66
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + + A+ +
Sbjct: 67 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 124
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + + G P
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 236
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 237 PMPPNCPPTLYSLMTKCWAYDPSRR 261
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 41 ELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVR-----EKFLQE 89
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + + A+ +
Sbjct: 90 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 147
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + + G P
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 259
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 260 PMPPNCPPTLYSLMTKCWAYDPSRR 284
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + + I ++
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I++E G L D R R + I ++
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 189
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + + I ++
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 13 ELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQE 61
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + + A+ +
Sbjct: 62 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + + G P
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 231
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 16 ELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVR-----EKFLQE 64
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + + A+ +
Sbjct: 65 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 122
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + + G P
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 234
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 235 PMPPNCPPTLYSLMTKCWAYDPSRR 259
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 15 ELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVR-----EKFLQE 63
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + + A+ +
Sbjct: 64 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 121
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + + G P
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 233
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 234 PMPPNCPPTLYSLMTKCWAYDPSRR 258
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 13 ELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVR-----EKFLQE 61
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + + A+ +
Sbjct: 62 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + + G P
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 231
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 10 ELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVR-----EKFLQE 58
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + + A+ +
Sbjct: 59 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 116
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + + G P
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPI 173
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 228
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 229 PMPPNCPPTLYSLMTKCWAYDPSRR 253
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 19/252 (7%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSI-SKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+G GEFG G+K +C +I + K T + E IM +HPNI+ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNIIRL 80
Query: 123 KDTYEDDSAVHIVMELCEGGEL--FDRIVARGHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + V I+ E E G L F R+ G +T +++ I ++ E +H
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQ---FNEIVGSPY---YMAPEVLK-R 233
RDL N L + K DFGLS F + +G + APE + R
Sbjct: 140 RDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 234 NYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDL 292
+ D WS G++++ ++ G P+W + Q V AI + D++ P P + L
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSLHQL 253
Query: 293 VKKMLNPDPKQR 304
+ D R
Sbjct: 254 MLDCWQKDRNAR 265
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 130 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESL 185
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 89
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR-----------GHYTERAAA- 160
+ KH NI++L D +++++E G L + + AR H E +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 161 ----AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 206
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 89
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTE 156
+ KH NI++L D +++++E G L + + AR +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 157 RAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 206
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 131 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESL 186
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 81
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR-----------GHYTERAAA- 160
+ KH NI++L D +++++E G L + + AR H E +
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 161 ----AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 198
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 82
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTE 156
+ KH NI++L D +++++E G L + + AR +
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 157 RAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 199
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 78
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR-----------GHYTERAAA- 160
+ KH NI++L D +++++E G L + + AR H E +
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 161 ----AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 195
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 16 DITMKHKLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 131 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 186
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G+FG Y A K++ + + ++E+ +E +MK + KH
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 66
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + + I ++
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ G+ + + APE L
Sbjct: 127 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESL 182
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 74
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR-----------GHYTERAAA- 160
+ KH NI++L D +++++E G L + + AR H E +
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 161 ----AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 191
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 70
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 131 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 186
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 189
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 393 QNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRS 448
QN +LQ +++ D DG G++++ EF+ + V K ++E L F +D+N
Sbjct: 50 QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNAD 109
Query: 449 GFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
G+I+++EL+ L +T ED I +M D D + DGRI Y+EF MK
Sbjct: 110 GYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 393 QNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRS 448
QN +LQ +++ D DG G++++ EF+ + V K ++E L F FD+N
Sbjct: 50 QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNAD 109
Query: 449 GFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
G+I+++EL+ L +T ED I +M D D + DGRI Y+E+ MK
Sbjct: 110 GYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMKG 159
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 19 DITMKHKLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 189
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 27 DITMKHKLGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 81
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 142 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 197
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 198 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 335 LKQFSVMNKLKKRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQN 394
K +++M + +K A+ ++A+ + +V LK AF +D +G I
Sbjct: 28 FKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLM 87
Query: 395 IPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIE 454
+P + +L++ D DG G+++Y EF+A ++ ++++ + ++ AF FD + G I
Sbjct: 88 LP-PNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVDNDGEITTA 145
Query: 455 ELRNAL---NDEVDTSGEDV--INAIMHDVDTDKDGRISYEEFAVMMK 497
EL + L N + + DV + ++ +VD + DG+I + EF+ MMK
Sbjct: 146 ELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 27 YGDEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFAC 86
+ D + + + VH KE +ISID + +G GEFG +V +G
Sbjct: 22 FVDPHTFEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---L 66
Query: 87 KSISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVM 136
K SKK++ A+ E RR E IM HPNI+ L+ V IV
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVT 125
Query: 137 ELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKK 194
E E G L D + + +T +++ I ++ + G +HRDL N L
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---N 181
Query: 195 ESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY 249
+ K DFGL+ P + G P + +PE + R + DVWS G++L+
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 250 -ILLCGVPPFWAETEQGVAQAI 270
++ G P+W + Q V +A+
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAV 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 89
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTE 156
+ KH NI++L D +++++E G L + + AR +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 157 RAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 206
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 72
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 133 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 188
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 62 RELGRGEFG-VTYLCTDVNN---GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
R+LG G FG V+ C D N GE A K++ K ++E+ I++ L H
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDILRTL-YHE 93
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC-- 173
+I+ K ED A + +VME G L D Y R + + + ++ Q+C
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQICEG 146
Query: 174 ----HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV---GSP-YY 225
H Q +HRDL N L N + +K DFGL+ G + + SP ++
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLDNDRL---VKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 226 MAPEVLKR-NYGPEVDVWSAGVILYILL 252
APE LK + DVWS GV LY LL
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 130
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR-----------GHYTERAAA- 160
+ KH NI++L D +++++E G L + + AR H E +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 161 ----AVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + ++ + +HRDL N L E + +K DFGL+ + +
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYY 247
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKN 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 221 DITMKHKLGGGQYGEVYEGV----WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 275
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + + I ++
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HR+L N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 336 KKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 391
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 392 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 68
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 23/263 (8%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 66
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I++E G L D R R + + I ++
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ G+ + + APE L
Sbjct: 127 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESL 182
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVI--DFKRDPWPKVSE 287
N + + DVW+ GV+L+ I G+ P+ G+ + + ++ D++ + E
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----PGIDPSQVYELLEKDYRMERPEGCPE 237
Query: 288 NAKDLVKKMLNPDPKQRLTAEEV 310
+L++ +P R + E+
Sbjct: 238 KVYELMRACWQWNPSDRPSFAEI 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI+ L D +++++E G L + + AR T +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)
Query: 29 DEYVVANGSTVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKS 88
D + + + VH KE +ISID + +G GEFG +V +G K
Sbjct: 24 DPHTFEDPTQTVHEFA--KELDATNISID----KVVGAGEFG------EVCSGR---LKL 68
Query: 89 ISKKKLRTAVDI------EDVRR----EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMEL 138
SKK++ A+ E RR E IM HPNI+ L+ V IV E
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEY 127
Query: 139 CEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKES 196
E G L D + + +T +++ I ++ + G +HRDL N L +
Sbjct: 128 MENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSN 183
Query: 197 SPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-I 250
K DFGL P + G P + +PE + R + DVWS G++L+ +
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 251 LLCGVPPFWAETEQGVAQAI 270
+ G P+W + Q V +A+
Sbjct: 244 MSYGERPYWEMSNQDVIKAV 263
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y++ +G+G FG D E A K I KK + + EV++++ + KH
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHD 111
Query: 118 N-----IVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARG---HYTERAAAAVMKTIV 167
IV LK + + + +V E+ +L RG + T + A + ++
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMA 227
+ E ++H DLKPEN L N K + +K +DFG S + G++ + + S +Y +
Sbjct: 172 FLA--TPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSC--QLGQRIYQXIQSRFYRS 226
Query: 228 PEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETE 263
PEV L Y +D+WS G IL + G P F E
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 62 RELGRGEFG-VTYLCTDVNN---GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
R+LG G FG V+ C D N GE A K++ K ++E+ I++ L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILRTL-YHE 76
Query: 118 NIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC-- 173
+I+ K ED + ++ +VME G L D Y R + + + ++ Q+C
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQICEG 129
Query: 174 ----HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV---GSP-YY 225
H Q +HR+L N L N + +K DFGL+ G ++ + SP ++
Sbjct: 130 MAYLHSQHYIHRNLAARNVLLDNDRL---VKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 226 MAPEVLKR-NYGPEVDVWSAGVILYILL 252
APE LK + DVWS GV LY LL
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ ++ DFGL+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIADFGLARDINNIDYYKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKL--RTAVDIEDVRREVQIMKHLPKHP 117
L +G G FG Y G+ ++ K+ T + R EV +++ +H
Sbjct: 40 LSTRIGSGSFGTVY------KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK-TRHV 92
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQ 176
NI+ L Y + IV + CEG L+ + V + + + + + H +
Sbjct: 93 NIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK 151
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVF---FRPGEQFNEIVGSPYYMAPEVLKR 233
++HRD+K N E +K DFGL+ + +Q + GS +MAPEV++
Sbjct: 152 NIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 234 N----YGPEVDVWSAGVILYILLCGVPPF 258
+ + DV+S G++LY L+ G P+
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 13 ELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQE 61
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + A+ +
Sbjct: 62 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L + + +K DFGLS + + G P
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVS---ATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 231
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 90
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 207
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 218 DITMKHKLGGGQYGEVYEGV----WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 272
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HR+L N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 333 KKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 388
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 389 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 62 RELGRGEFG-VTYLCTDVNN---GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
R+LG G FG V+ C D N GE A K++ K ++E+ I++ L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILRTL-YHE 76
Query: 118 NIVSLKDTYED--DSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC-- 173
+I+ K ED + ++ +VME G L D Y R + + + ++ Q+C
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQICEG 129
Query: 174 ----HEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV---GSP-YY 225
H Q +HR+L N L N + +K DFGL+ G ++ + SP ++
Sbjct: 130 MAYLHAQHYIHRNLAARNVLLDNDRL---VKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 226 MAPEVLKR-NYGPEVDVWSAGVILYILL 252
APE LK + DVWS GV LY LL
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 85
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIADFGLARDINNIDYYKK 202
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 87
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 204
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I+ + EA++ LM DVDG+ +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 416 NYGEFVAV-SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
+ EF+A+ S LK +++ L +AF FD+N G I EL++ L + GE + +A
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT----SIGEKLTDA 119
Query: 475 IMHDV---DTDKDGRISYEEFAVMM 496
+ D+ +D G I+ ++FA ++
Sbjct: 120 EVDDMLREVSDGSGEINIQQFAALL 144
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 352 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDG 411
+AE LS EE+ GLKE F+M+DT+ G I + E++++ LM+AAD+D
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 412 DGSLNYGEFVAVSVH 426
G+++YGEF+A +VH
Sbjct: 73 SGTIDYGEFIAATVH 87
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 436 LHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEF 492
L + F D + SG I +EL++ L E I +M D DK G I Y EF
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 393 QNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRS 448
QN +LQ +++ D DG G++++ EF+ + V K ++E L F D+N
Sbjct: 50 QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNAD 109
Query: 449 GFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
G+I+++EL+ L +T ED I +M D D + DGRI Y+EF MK
Sbjct: 110 GYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 393 QNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRS 448
QN +LQ +++ D DG G++++ EF+ + V K ++E L F FD+N
Sbjct: 50 QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNAD 109
Query: 449 GFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 498
G+I+++EL+ L +T ED I +M D D + DGRI Y+E MK
Sbjct: 110 GYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMKG 159
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 69
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I++E G L D R R + I ++
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ G+ + + APE L
Sbjct: 130 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESL 185
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y +K++ K +++E+ +E +MK + KH
Sbjct: 260 DITMKHKLGGGQYGEVYEGV----WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KH 314
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HR+L N L E+ +K DFGLS G+ + G+ + + APE L
Sbjct: 375 KKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 430
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 431 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 33/227 (14%)
Query: 60 LGRELGRGEFGVTYLCTDV-------NNGEKFACKSISKKKLRTAVDIEDVRREVQIMKH 112
LG+ LG G FG L + N K A K + K T D+ D+ E+++MK
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 89
Query: 113 LPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTE 156
+ KH NI++L D +++++E G L + + AR +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 157 RAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF 216
+ + + ++ + +HRDL N L E + +K DFGL+ +
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDXX 206
Query: 217 NEIVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+ +MAPE L R Y + DVWS GV+L+ I G P+
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 261
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 119/324 (36%), Gaps = 72/324 (22%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPKH 116
Y++ LG G FG C D G+ ++ K +R E R E+ ++K + +
Sbjct: 53 YEIVGNLGEGTFGKVVECLDHARGKS----QVALKIIRNVGKYREAARLEINVLKKIKEK 108
Query: 117 PN-----IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
V + D + + I EL G F+ + Y + +
Sbjct: 109 DKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 167
Query: 170 VQVCHEQGVMHRDLKPENFLFANKK----------------ESSPLKAIDFGLSVFFRPG 213
++ HE + H DLKPEN LF N + +++ ++ DFG + F
Sbjct: 168 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DH 225
Query: 214 EQFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QG 265
E IV + +Y PEV L+ + DVWS G IL+ G F +
Sbjct: 226 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 285
Query: 266 VAQAIIRSVIDFKRDP---------WPK-------VSENAK-----------------DL 292
+ I +I R W + V EN K DL
Sbjct: 286 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 345
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWL 316
+++ML DP QR+T E L HP+
Sbjct: 346 MRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 119/324 (36%), Gaps = 72/324 (22%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPKH 116
Y++ LG G FG C D G+ ++ K +R E R E+ ++K + +
Sbjct: 30 YEIVGNLGEGTFGKVVECLDHARGKS----QVALKIIRNVGKYREAARLEINVLKKIKEK 85
Query: 117 PN-----IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
V + D + + I EL G F+ + Y + +
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 144
Query: 170 VQVCHEQGVMHRDLKPENFLFANKK----------------ESSPLKAIDFGLSVFFRPG 213
++ HE + H DLKPEN LF N + +++ ++ DFG + F
Sbjct: 145 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DH 202
Query: 214 EQFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QG 265
E IV + +Y PEV L+ + DVWS G IL+ G F +
Sbjct: 203 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 262
Query: 266 VAQAIIRSVIDFKRDP---------WPK-------VSENAK-----------------DL 292
+ I +I R W + V EN K DL
Sbjct: 263 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 322
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWL 316
+++ML DP QR+T E L HP+
Sbjct: 323 MRRMLEFDPAQRITLAEALLHPFF 346
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDXXKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++E G L + + AR T +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDXXKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y LGR++G G FG YL TD+ GE+ A K K + IE +I K +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIES-----KIYKMMQGGV 65
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQ 176
I +++ + +VMEL G L D ++ + + ++ ++ H +
Sbjct: 66 GIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--------PGEQFNEIVGSPYYMAP 228
+HRD+KP+NFL K+ + + IDFGL+ +R P + + G+ Y +
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS- 183
Query: 229 EVLKRNYGPEV----DVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
+ + G E D+ S G +L G P+ QG+ A KR + +
Sbjct: 184 --INTHLGIEQSRRDDLESLGYVLMYFNLGSLPW-----QGLKAAT-------KRQKYER 229
Query: 285 VSENAKDLVKKMLNP 299
+SE KKM P
Sbjct: 230 ISE------KKMSTP 238
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y LGR++G G FG YL TD+ GE+ A K K + IE +I K +
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIES-----KIYKMMQGGV 63
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQ 176
I +++ + +VMEL G L D ++ + + ++ ++ H +
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 122
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--------PGEQFNEIVGSPYYMAP 228
+HRD+KP+NFL K+ + + IDFGL+ +R P + + G+ Y +
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS- 181
Query: 229 EVLKRNYGPEV----DVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
+ + G E D+ S G +L G P+ QG+ A KR + +
Sbjct: 182 --INTHLGIEQSRRDDLESLGYVLMYFNLGSLPW-----QGLKAAT-------KRQKYER 227
Query: 285 VSENAKDLVKKMLNP 299
+SE KKM P
Sbjct: 228 ISE------KKMSTP 236
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKH 116
D + +LG G++G Y A K++ + + ++E+ +E +MK + KH
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KH 73
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFD--RIVARGHYTERAAAAVMKTIVEVVQVCH 174
PN+V L + +I+ E G L D R R + I ++
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVL 231
++ +HRDL N L E+ +K DFGLS G+ G+ + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESL 189
Query: 232 KRN-YGPEVDVWSAGVILY-ILLCGVPPF 258
N + + DVW+ GV+L+ I G+ P+
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 119/324 (36%), Gaps = 72/324 (22%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI-EDVRREVQIMKHLPKH 116
Y++ LG G FG C D G+ ++ K +R E R E+ ++K + +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKS----QVALKIIRNVGKYREAARLEINVLKKIKEK 76
Query: 117 PN-----IVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGH--YTERAAAAVMKTIVEV 169
V + D + + I EL G F+ + Y + +
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135
Query: 170 VQVCHEQGVMHRDLKPENFLFANKK----------------ESSPLKAIDFGLSVFFRPG 213
++ HE + H DLKPEN LF N + +++ ++ DFG + F
Sbjct: 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DH 193
Query: 214 EQFNEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETE-------QG 265
E IV + +Y PEV L+ + DVWS G IL+ G F +
Sbjct: 194 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 253
Query: 266 VAQAIIRSVIDFKRDP---------WPK-------VSENAK-----------------DL 292
+ I +I R W + V EN K DL
Sbjct: 254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 313
Query: 293 VKKMLNPDPKQRLTAEEVLEHPWL 316
+++ML DP QR+T E L HP+
Sbjct: 314 MRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++ G L + + AR T +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 57 DYDLGRELGRGEFGVTY---LCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
D LG ++GRG FG + L D +C+ L+ +E +I+K
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-----KFLQEARILKQY 169
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV--- 170
HPNIV L ++IVMEL +GG+ + G A +KT++++V
Sbjct: 170 -SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDA 222
Query: 171 ----QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS------VFFRPGEQFNEIV 220
+ + +HRDL N L K + LK DFG+S V+ G V
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMSREEADGVYAASGGLRQVPV 279
Query: 221 GSPYYMAPEVLKRN-YGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVIDFK 278
+ APE L Y E DVWS G++L+ G P+ + Q + + +
Sbjct: 280 K---WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----G 332
Query: 279 RDPWPKVSENAK-DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
R P P++ +A L+++ +P QR + + + LQ+ +K
Sbjct: 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE--LQSIRK 374
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 102 DVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAA 159
D E IM HPN++ L+ + V I+ E E G L D + + G +T
Sbjct: 80 DFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 137
Query: 160 AAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR---PGEQF 216
+++ I ++ + +HRDL N L + K DFGLS F +
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 217 NEIVGSPY---YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
+G + APE ++ R + DVWS G++++ ++ G P+W T Q V AI
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDI------EDVRR----EVQIMK 111
R +G GEFG +V +G K K++L A+ E RR E IM
Sbjct: 28 RVIGAGEFG------EVCSGR---LKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMG 78
Query: 112 HLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEV 169
HPNI+ L+ V IV E E G L D + + G +T +++ I
Sbjct: 79 QF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 170 VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-Y 225
++ + G +HRDL N L + K DFGLS P + G P +
Sbjct: 137 MKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 226 MAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
APE + R + DVWS G++++ ++ G P+W T Q V +A+
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 40/265 (15%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFA------------CKSISKKKLRTAVDIEDVRRE 106
+LGR +G G+FG DV+ G + CK+ + +R E +E
Sbjct: 13 ELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-----EKFLQE 61
Query: 107 VQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK-T 165
M+ HP+IV L ++ V I+MELC GEL + R + A+ +
Sbjct: 62 ALTMRQF-DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 166 IVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS-PY 224
+ + + +HRD+ N L ++ + +K DFGLS + G P
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTXXKASKGKLPI 176
Query: 225 -YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA-IIRSVIDFKRD 280
+MAPE + R + DVW GV ++ IL+ GV PF QGV +I + + +R
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERL 231
Query: 281 PW-PKVSENAKDLVKKMLNPDPKQR 304
P P L+ K DP +R
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 60 LGRELGRGEFGVTYLC--TDVNNGEKFACKSISKKKLR---TAVDIEDVRREVQIMKHLP 114
LG+ LG G FG + ++ + +++ K L+ T D+ D+ E+++MK +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG----------------HYTERA 158
KH NI++L D +++++ G L + + AR T +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNE 218
+ + ++ Q +HRDL N L E++ +K DFGL+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKK 215
Query: 219 IVGSPY---YMAPEVL-KRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 25/268 (9%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLPKHPNI 119
ELGRG +GV V +G+ A K ++R V+ ++ +R ++ I P
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVK-----RIRATVNSQEQKRLLXDLDISXRTVDCPFT 95
Query: 120 VSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYT-ERAAAAVMKTIVEVVQVCHEQ 176
V+ + V I EL + + + +++ +G E + +IV+ ++ H +
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 177 -GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPYYMAPEVL---- 231
V+HRD+KP N L + +K DFG+S + + G Y APE +
Sbjct: 156 LSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPEL 212
Query: 232 -KRNYGPEVDVWSAGVILYILLCGVPPF--WAETEQGVAQAIIRSVIDFKRDPWPKVSEN 288
++ Y + D+WS G+ L P+ W Q + Q + D K S
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAE 269
Query: 289 AKDLVKKMLNPDPKQRLTAEEVLEHPWL 316
D + L + K+R T E+ +HP+
Sbjct: 270 FVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I+ + EA++ LM DVDG+ ++
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 416 NYGEFVAV-SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
+ EF+A+ S LK +++ L +AF FD+N G I EL++ L + + ++
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDE 124
Query: 475 IMHDVDTDKDGRISYEEFAVMM 496
++ +V +D G I+ ++FA ++
Sbjct: 125 MLREV-SDGSGEINIKQFAALL 145
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 19/242 (7%)
Query: 89 ISKKKLRTAVDIEDVRR---EVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELF 145
I+ K++R + + E+ +R ++ ++ P IV T+ ++ V I MEL G
Sbjct: 53 IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCA 110
Query: 146 DRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQ-GVMHRDLKPENFLFANKKESSPLKAI 202
+++ R G ER + IV+ + E+ GV+HRD+KP N L E +K
Sbjct: 111 EKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLC 167
Query: 203 DFGLSVFFRPGEQFNEIVGSPYYMAPEVL------KRNYGPEVDVWSAGVILYILLCGVP 256
DFG+S + + G YMAPE + K +Y DVWS G+ L L G
Sbjct: 168 DFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227
Query: 257 PFW-AETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPW 315
P+ +T+ V +++ S + + VK L D ++R ++LEH +
Sbjct: 228 PYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286
Query: 316 LQ 317
++
Sbjct: 287 IK 288
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 29/223 (13%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRT---AVDIEDVRREVQIMKHLPKH 116
G+ LG G FG T G++ A ++ K L++ A + E + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTER-AAAAVMKTIVEVVQVCH- 174
NIV+L V ++ E C G+L + + + E A A+ + + + H
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 175 ----EQGV--------MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
QG+ +HRD+ N L N + K DFGL+ N IV
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIM--NDSNYIVKG 224
Query: 223 PY-----YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE + Y + DVWS G++L+ I G+ P+
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSISKKKL-RTAVDIEDVRREVQIMKHLPKHPNIV 120
R +G GEFG G++ +I K+ T D E IM HPN+V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF-DHPNVV 107
Query: 121 SLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGV 178
L+ V IV+E E G L D + + G +T +++ I ++ + G
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY 166
Query: 179 MHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-R 233
+HRDL N L + K DFGLS P + G P + APE ++ R
Sbjct: 167 VHRDLAARNILV---NSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 234 NYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
+ DVWS G++++ ++ G P+W + Q V +AI
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 47/286 (16%)
Query: 57 DYDLGRELGRGEFGVTY---LCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHL 113
D LG ++GRG FG + L D +C+ L+ +E +I+K
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-----KFLQEARILKQY 169
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVV--- 170
HPNIV L ++IVMEL +GG+ + G A +KT++++V
Sbjct: 170 -SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDA 222
Query: 171 ----QVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP--- 223
+ + +HRDL N L K + LK DFG+S E+ + + +
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMS-----REEADGVXAASGGL 274
Query: 224 -----YYMAPEVLKRN-YGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVID 276
+ APE L Y E DVWS G++L+ G P+ + Q + + +
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG--- 331
Query: 277 FKRDPWPKVSENAK-DLVKKMLNPDPKQRLTAEEVLEHPWLQNAKK 321
R P P++ +A L+++ +P QR + + + LQ+ +K
Sbjct: 332 -GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE--LQSIRK 374
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 335 LKQFSVMNKLKKRALQVVAEFL-SVEEVAGLKEAFEMMDTNKRGK------INXXXXXXX 387
+++F KL + AL +A L S EE L + F +D N G+ I+
Sbjct: 35 MRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSG 94
Query: 388 XXXXXQNIP--EADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDR 445
++P E+++ ++ AAD D +G ++Y EFV V++ K + + + L AF FD+
Sbjct: 95 EEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQ 154
Query: 446 NRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 497
+ +G I ++EL + +D ++ +D++ DG + +EEF M++
Sbjct: 155 DGNGKISVDELASVFG--LDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 204
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 54/288 (18%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMKHLPK 115
DLG E+GRG +G +G+ A K ++R+ VD ++ ++ ++ ++
Sbjct: 26 DLG-EIGRGAYGSVNKMVHKPSGQIMAVK-----RIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 116 HPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYT-------ERAAAAVMKTIVE 168
P IV + I MEL FD+ + E + T+
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 169 VVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEI-----VGSP 223
+ + ++HRD+KP N L S +K DFG+S G+ + I G
Sbjct: 138 LNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCR 189
Query: 224 YYMAPEVL-----KRNYGPEVDVWSAGVILYILLCGVPPF--WAETEQGVAQAIIRSVID 276
YMAPE + ++ Y DVWS G+ LY L G P+ W + Q +
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV------ 243
Query: 277 FKRDPWPKVSENAK--------DLVKKMLNPDPKQRLTAEEVLEHPWL 316
K DP P++S + + + V L D +R +E+L+HP++
Sbjct: 244 -KGDP-PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 132/330 (40%), Gaps = 78/330 (23%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y L R+LG G F +L D+ N A K + K+ T E E+++++ +
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDAD 76
Query: 118 N----------IVSLKDTY--EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVM-- 163
N I+ L D + + + VH+VM GE ++ + Y R +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYVK 134
Query: 164 ---KTIVEVVQVCHEQ-GVMHRDLKPENFLFA---NKKESSPLKAIDFGLSVFFRPGEQF 216
K ++ + H + G++H D+KPEN L + + +K D G + ++ E +
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHY 192
Query: 217 NEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQG---------V 266
+ + Y +PEV L +G D+WS +++ L+ G F E ++G +
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYTKDDDHI 250
Query: 267 AQAI--------------------------IRSVIDFKRDPWPKV-----------SENA 289
AQ I +R++ K P V ++
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
D + ML DP++R A ++ HPWL++
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 132/330 (40%), Gaps = 78/330 (23%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y L R+LG G F +L D+ N A K + K+ T E E+++++ +
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDAD 76
Query: 118 N----------IVSLKDTY--EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVM-- 163
N I+ L D + + + VH+VM GE ++ + Y R +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYVK 134
Query: 164 ---KTIVEVVQVCHEQ-GVMHRDLKPENFLFA---NKKESSPLKAIDFGLSVFFRPGEQF 216
K ++ + H + G++H D+KPEN L + + +K D G + ++ E +
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHY 192
Query: 217 NEIVGSPYYMAPEV-LKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQG---------V 266
+ + Y +PEV L +G D+WS +++ L+ G F E ++G +
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYTKDDDHI 250
Query: 267 AQAI--------------------------IRSVIDFKRDPWPKV-----------SENA 289
AQ I +R++ K P V ++
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 290 KDLVKKMLNPDPKQRLTAEEVLEHPWLQNA 319
D + ML DP++R A ++ HPWL++
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRT---AVDIEDVRREVQIMKHLPKH 116
G+ LG G FG T G++ A ++ K L++ A + E + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTER-AAAAVMKTIVEVVQVCH- 174
NIV+L V ++ E C G+L + + + E A A+ + + H
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 175 ----EQGV--------MHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGS 222
QG+ +HRD+ N L N + K DFGL+ N IV
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIM--NDSNYIVKG 224
Query: 223 PY-----YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE + Y + DVWS G++L+ I G+ P+
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 51 GQDISID---YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREV 107
G + ID Y ++LG G F L +++G +A K I + + D E+ +RE
Sbjct: 21 GHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ---DREEAQREA 77
Query: 108 QIMKHLPKHPNIVSL-KDTYEDDSAVH---IVMELCEGGELFD---RIVARGHY-TERAA 159
M L HPNI+ L + A H +++ + G L++ R+ +G++ TE
Sbjct: 78 D-MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136
Query: 160 AAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPG------ 213
++ I ++ H +G HRDLKP N L ++ + + + G
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT 196
Query: 214 -EQFNEIVGSPYYMAPEVLKRN----YGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQ 268
+ + + Y APE+ DVWS G +LY ++ G P+ ++G +
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256
Query: 269 AI-IRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQR------LTAEEVLEHP 314
A+ +++ + + P+ S L+ M+ DP QR L+ E L+ P
Sbjct: 257 ALAVQNQLSIPQS--PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 74
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH- 174
NIV K + ++ME G L D + A + +K + Q+C
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDH-----IKLLQYTSQICKG 129
Query: 175 -----EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP-----Y 224
+ +HRDL N L N+ +K DFGL+ P ++ V P +
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESPIF 185
Query: 225 YMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
+ APE L + + DVWS GV+LY L +
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 40/255 (15%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
Y LGR++G G FG YL ++ +GE+ A K K + IE + K +
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIES-----KFYKMMQGGV 65
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQ 176
I S+K + +VMEL G L D ++ + + ++ ++ H +
Sbjct: 66 GIPSIKWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--------PGEQFNEIVGSPYYMAP 228
+HRD+KP+NFL K+ + + IDFGL+ +R P + + G+ Y +
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS- 183
Query: 229 EVLKRNYGPEV----DVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPK 284
+ + G E D+ S G +L G P+ QG+ A KR + +
Sbjct: 184 --INTHLGIEQSRRDDLESLGYVLMYFNLGSLPW-----QGLKAAT-------KRQKYER 229
Query: 285 VSENAKDLVKKMLNP 299
+SE KKM P
Sbjct: 230 ISE------KKMSTP 238
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
R+LG G FG LC N GE+ A KS+ K I D+++E++I+++L H
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEILRNL-YHE 83
Query: 118 NIVSLKDTYEDD--SAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH- 174
NIV K +D + + ++ME G L + + + + + + VQ+C
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-----KNKINLKQQLKYAVQICKG 138
Query: 175 -----EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV---GSP-YY 225
+ +HRDL N L ++ + +K DFGL+ ++ + SP ++
Sbjct: 139 MDYLGSRQYVHRDLAARNVLVESEHQ---VKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 195
Query: 226 MAPEVLKRN-YGPEVDVWSAGVILYILL 252
APE L ++ + DVWS GV L+ LL
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
R+LG G FG LC N GE+ A KS+ K I D+++E++I+++L H
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEILRNL-YHE 71
Query: 118 NIVSLKDTYEDD--SAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH- 174
NIV K +D + + ++ME G L + + + + + + VQ+C
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-----KNKINLKQQLKYAVQICKG 126
Query: 175 -----EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV---GSP-YY 225
+ +HRDL N L ++ + +K DFGL+ ++ + SP ++
Sbjct: 127 MDYLGSRQYVHRDLAARNVLVESEHQ---VKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 183
Query: 226 MAPEVLKRN-YGPEVDVWSAGVILYILL 252
APE L ++ + DVWS GV L+ LL
Sbjct: 184 YAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 102 DVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAA 159
D E IM HPN++ L+ + V I+ E E G L D + + G +T
Sbjct: 54 DFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 111
Query: 160 AAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR---PGEQF 216
+++ I ++ + +HR L N L + K DFGLS F +
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 217 NEIVGSPY---YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
+G + APE ++ R + DVWS G++++ ++ G P+W T Q V AI
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 333 ARLKQFSVMNKLKKRALQVV-AEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXX 391
+K+F KL + A+ + ++ ++EE L + F +D N G+++
Sbjct: 10 GNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKL 69
Query: 392 XQ-----------NIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAF 440
Q + EA++ ++++ D D +G + Y EFV V + + + + E L AF
Sbjct: 70 MQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAF 129
Query: 441 SFFDRNRSGFIEIEELRNALN-DEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 499
FD + SG I EEL EVD ++ + ++ + D + DG + +EEF MM+
Sbjct: 130 QQFDSDGSGKITNEELGRLFGVTEVD---DETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
Query: 500 TD 501
D
Sbjct: 187 CD 188
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 71
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 124
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQF---NEIVGSP- 223
+ +HRDL N L N+ +K DFGL+ ++F E SP
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 224 YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 43/270 (15%)
Query: 62 RELGRGEFGVTYLCTDVNNGEKFACKSIS--KKKLRTAVDIEDVRREVQIMKHLPKHPNI 119
R++G G FG LC ++N + +A K + KK R+A D+ +++Q +
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK 100
Query: 120 VSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH---EQ 176
K Y D H+ + G I+ R +Y + +E+++ + +
Sbjct: 101 YHGKFMYYD----HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156
Query: 177 GVMHRDLKPENFLFAN----------------------KKESSPLKAIDFGLSVFFRPGE 214
+ H DLKPEN L + + +S+ +K IDFG + F +
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF--KSD 214
Query: 215 QFNEIVGSPYYMAPEVLKRNYGPEV--DVWSAGVILYILLCGVPPFWAETEQGVAQAIIR 272
I+ + Y APEV+ N G +V D+WS G +L L G F E A++
Sbjct: 215 YHGSIINTRQYRAPEVI-LNLGWDVSSDMWSFGCVLAELYTGSLLFRTH-EHMEHLAMME 272
Query: 273 SVIDFKRDPWPK--VSENAKDLVKKMLNPD 300
S+I P PK + E K K +N D
Sbjct: 273 SII----QPIPKNMLYEATKTNGSKYVNKD 298
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
R+LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 74
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L + Y ++ + +K + Q+C
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLRE-------YLQKHKERIDHIKLLQYTSQIC 127
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 183
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 123/296 (41%), Gaps = 32/296 (10%)
Query: 31 YVVANGSTVVHRL---CVLKEPSGQDISID-YDLGRE-------LGRGEFGVTYLCTDVN 79
Y + + HRL C +P Q ++ D +++ RE LG+G FG ++ T N
Sbjct: 149 YYSKHADGLCHRLTNVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGT-WN 207
Query: 80 NGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELC 139
+ A K++ + E +E Q+MK L +H +V L ++ ++IV E
Sbjct: 208 GTTRVAIKTLKPGNMSP----EAFLQEAQVMKKL-RHEKLVQLYAVVSEE-PIYIVTEYM 261
Query: 140 EGGELFDRIVAR-GHYTERAAAAVMKT-IVEVVQVCHEQGVMHRDLKPENFLFANKKESS 197
G L D + G Y M I + +HRDL+ N L E+
Sbjct: 262 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENL 318
Query: 198 PLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEV-LKRNYGPEVDVWSAGVILYILLC 253
K DFGL E + G+ + + APE L + + DVWS G++L L
Sbjct: 319 VCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
Query: 254 -GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAE 308
G P+ + V + R ++ P+ E+ DL+ + DP++R T E
Sbjct: 378 KGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 117 PNIVSL-KDTYEDDSAVHIVMELCEGGELFDRIVARGH----YTERAAAAVMKTIVEVVQ 171
N+V+L + + +++E C+ G L + ++ + Y E A + K + +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE-APEDLYKDFLTLEH 151
Query: 172 -VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQF 216
+C+ V +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVR 208
Query: 217 NEIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRS 273
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRR 265
Query: 274 VIDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ + R P + ++ + ML+ +P QR T E++EH
Sbjct: 266 LKEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + +++E C+ G L + + R + A + K + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDXVRK 207
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 264
Query: 275 IDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 265 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 35/291 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVD--IEDVRREVQIMKHLPKHP 117
L RELG G FG +L N + ++ K L+ A D +D RE +++ +L +H
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHE 75
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARG-------------HYTERAAAAVMK 164
+IV + + +V E + G+L + A G T+ + +
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 165 TIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV------FFRPGEQFNE 218
I + Q +HRDL N L E+ +K DFG+S ++R G
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMSRDVYSTDYYRVG---GH 189
Query: 219 IVGSPYYMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVID 276
+ +M PE ++ R + E DVWS GV+L+ I G P++ + V + I + +
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL 249
Query: 277 FKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSL 327
+ P + +L+ +P R + + H LQN KA V L
Sbjct: 250 QRPRTCP---QEVYELMLGCWQREPHMRKNIKGI--HTLLQNLAKASPVYL 295
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 70
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 123
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 179
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + +++E C+ G L + + R + A + K + +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRK 244
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 301
Query: 275 IDFKRDPWPKVSENAKDLVKKMLN---PDPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 302 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 78
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 131
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 187
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 51/235 (21%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRR---EVQIMK--- 111
Y++ +G G +G ++C + EK KK LR D+ D +R E+ I+
Sbjct: 55 YEIRHLIGTGSYG--HVCEAYDKLEKRVVAI--KKILRVFEDLIDCKRILREIAILNRLN 110
Query: 112 --HLPKHPNIVSLKDTYEDDSAVHIVMELCEGG--ELFDRIVARGHYTERAAAAVMKTIV 167
H+ K +IV KD + D +++V+E+ + +LF V + TE ++ ++
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDE-LYVVLEIADSDFKKLFRTPV---YLTELHIKTLLYNLL 166
Query: 168 EVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS------------VFFRPGEQ 215
V+ H G++HRDLKP N L + +K DFGL+ + P E
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPRED 223
Query: 216 FNEIVGSP----------------YYMAPE--VLKRNYGPEVDVWSAGVILYILL 252
+V P +Y APE +L+ NY +DVWS G I LL
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 282 WPKVSENAKDLVKKMLNPDPKQRLTAEEVLEHPWLQNAKKAPNVSLGETVKARLKQFSVM 341
+P S +A L+K+ML +P +R+T E L HP+ + + A V T K RL M
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA-EVETNATEKVRLPFNDWM 424
Query: 342 N 342
N
Sbjct: 425 N 425
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 74
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 127
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 183
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 71
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 124
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 180
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 76
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 129
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 185
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 69
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 122
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 178
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 77
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 130
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 186
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 102
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 155
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 211
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 75
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 128
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 184
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + +++E C+ G L + + R + A + K + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRK 207
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 264
Query: 275 IDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 265 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 71
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 124
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 180
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 89
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 142
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 198
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 89
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 142
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP---- 223
+ +HRDL N L N+ +K DFGL+ P ++ V P
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVL-PQDKEXXKVKEPGESP 198
Query: 224 -YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + ++ E C+ G L + + R + A + K + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRK 198
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 255
Query: 275 IDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 256 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + ++ E C+ G L + + R + A + K + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRK 198
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 255
Query: 275 IDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 256 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKL-RTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+G GEFG G++ C +I K T D E IM HPNI+ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNIIHL 95
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
+ V I+ E E G L D + + G +T +++ I ++ + +H
Sbjct: 96 EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVH 154
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNY 235
RDL N L + K DFG+S P + G P + APE + R +
Sbjct: 155 RDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 236 GPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
DVWS G++++ ++ G P+W + Q V +AI
Sbjct: 212 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 36/280 (12%)
Query: 57 DYDLGRELGRGEFGVTYL--CTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLP 114
D L RELG G FG +L C +++ + ++ K T +D +RE +++ +L
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL- 74
Query: 115 KHPNIVSLKDTYEDDSAVHIVMELCEGGEL--FDRI--------------VARGHYTERA 158
+H +IV D + +V E + G+L F R A+G
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 159 AAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSV------FFRP 212
+ I + Q +HRDL N L + +K DFG+S ++R
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 213 GEQFNEIVGSPYYMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
G + +M PE ++ R + E DVWS GVIL+ I G P++ + V + I
Sbjct: 192 G---GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
Query: 271 IRSVIDFKRDPWPKVSENAKDLVKKMLNPDPKQRLTAEEV 310
+ + + PK D++ +P+QRL +E+
Sbjct: 249 TQGRVLERPRVCPK---EVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 104 RREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVM 163
+RE + L + P++V + D E D +++ L G +L + +G A A++
Sbjct: 82 QREARTAGRL-QEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIV 140
Query: 164 KTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGE--QFNEIVG 221
+ I + H G HRD+KPEN L + + +DFG++ + Q VG
Sbjct: 141 RQIGSALDAAHAAGATHRDVKPENILVSADDFA---YLVDFGIASATTDEKLTQLGNTVG 197
Query: 222 SPYYMAPEVLKRNYGP-EVDVWSAGVILYILLCGVPPFWAE 261
+ YY APE ++ D+++ +LY L G PP+ +
Sbjct: 198 TLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 58 YDLGRELGRGEFGVT---YLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLP 114
+ LGR LG+GEFG L + + K A K + K + + DIE+ RE MK
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEF- 82
Query: 115 KHPNI-----VSLKDTYEDDSAV-HIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVE 168
HP++ VSL+ + + +++ + G+L ++A E ++T+V
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA-SRIGENPFNLPLQTLVR 141
Query: 169 V-------VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVG 221
++ + +HRDL N + A E + DFGLS G+ + +
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 222 SPY---YMAPEVLKRN-YGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVI- 275
S ++A E L N Y DVW+ GV ++ I+ G P+ G+ A I + +
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY-----AGIENAEIYNYLI 253
Query: 276 --DFKRDPWPKVSENAKDLVKKMLNPDPKQR 304
+ + P P+ E DL+ + + DPKQR
Sbjct: 254 GGNRLKQP-PECMEEVYDLMYQCWSADPKQR 283
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRT---AVDIEDVRREVQIMKHLPKH 116
G+ LG G FG T G++ A ++ K L++ A + E + E++IM HL +H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR---------GHYTE-RAAAAVMKTI 166
NIV+L V ++ E C G+L + + + G E R +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 167 VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY-- 224
+ + + +HRD+ N L N + K DFGL+ N IV
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIM--NDSNYIVKGNARL 216
Query: 225 ---YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE + Y + DVWS G++L+ I G+ P+
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E++A KEAF + D + G I+ + EA++ LM DVDG+ +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 416 NYGEFVAV-SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNAL 460
+ EF+A+ S LK +++ L +AF FD+N G I EL++ L
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL 109
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 438 KAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 496
+AF+ FD++ +G I EL + + E +N +M+++D D + +I + EF +M
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRT---AVDIEDVRREVQIMKHLPKH 116
G+ LG G FG T G++ A ++ K L++ A + E + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR---------GHYTE-RAAAAVMKTI 166
NIV+L V ++ E C G+L + + + G E R +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 167 VEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY-- 224
+ + + +HRD+ N L N + K DFGL+ N IV
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIM--NDSNYIVKGNARL 224
Query: 225 ---YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE + Y + DVWS G++L+ I G+ P+
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + +++E C+ G L + + R + A + K + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ + P
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRK 198
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 255
Query: 275 IDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 256 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKL-RTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+G GEFG G++ C +I K T D E IM HPNI+ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNIIHL 74
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
+ V I+ E E G L D + + G +T +++ I ++ + +H
Sbjct: 75 EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 133
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNY 235
RDL N L + K DFG+S P + G P + APE + R +
Sbjct: 134 RDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 236 GPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
DVWS G++++ ++ G P+W + Q V +AI
Sbjct: 191 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 64 LGRGEFGVTYLCTDVNNGEKFACKSISKKKL-RTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+G GEFG G++ C +I K T D E IM HPNI+ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF-DHPNIIHL 80
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQGVMH 180
+ V I+ E E G L D + + G +T +++ I ++ + +H
Sbjct: 81 EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 139
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFR--PGEQFNEIVGS-PY-YMAPEVLK-RNY 235
RDL N L + K DFG+S P + G P + APE + R +
Sbjct: 140 RDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 236 GPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
DVWS G++++ ++ G P+W + Q V +AI
Sbjct: 197 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 35/282 (12%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPK 115
+LG+ LGRG FG + C++++ K L+ + R E++I+ H+
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 116 HPNIVSL-KDTYEDDSAVHIVMELCEGGELFDRI---------------VARGHYTERAA 159
H N+V+L + + +++E C+ G L + + + T
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 160 AAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+ + ++ + +HRDL N L + E + +K DFGL+ + P
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRK 207
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 264
Query: 275 IDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 265 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + ++ E C+ G L + + R + A + K + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ + P
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRK 198
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 255
Query: 275 IDFKRDPWPKVSENAKDLVKKMLN---PDPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 256 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 62 RELGRGEFGVTYLC----TDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
++LG+G FG +C N GE A K + T + D RE++I+K L +H
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHD 72
Query: 118 NIVSLKDTYEDDSA--VHIVMELCEGGELFDRIVARGHYTERAAAAV--MKTIVEVVQVC 173
NIV K + ++ME G L D Y ++ + +K + Q+C
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD-------YLQKHKERIDHIKLLQYTSQIC 125
Query: 174 H------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVG---SP- 223
+ +HR+L N L N+ +K DFGL+ +++ ++ SP
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENR---VKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 224 YYMAPEVLKRN-YGPEVDVWSAGVILYILLCGV 255
++ APE L + + DVWS GV+LY L +
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 36/282 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + C++++ K L+ + R E++I+ H+ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 117 PNIVS-LKDTYEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAA--VMKTIVEVVQ- 171
N+V+ L + + +++E C+ G L + + R + A + K + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 172 VCHEQGV------------MHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFN 217
+C+ V +HRDL N L + E + +K DFGL+ + P
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRK 207
Query: 218 EIVGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSV 274
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRL 264
Query: 275 IDFKRDPWPKVSENAKDLVKKMLNP---DPKQRLTAEEVLEH 313
+ R P + ++ + ML+ +P QR T E++EH
Sbjct: 265 KEGTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNI 119
L + LG G+FG ++ NN K A K++ + +E E +MK L +H +
Sbjct: 17 LVKRLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTL-QHDKL 70
Query: 120 VSLKDTYEDDSAVHIVMELCEGGELFDRIVAR--GHYTERAAAAVMKTIVEVVQVCHEQG 177
V L + ++I+ E G L D + + G I E + +
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 130
Query: 178 VMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEVLKRN 234
+HRDL+ N L + ES K DFGL+ E + G+ + + APE + N
Sbjct: 131 YIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--N 184
Query: 235 YGP---EVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAI 270
+G + DVWS G++LY I+ G P+ T V A+
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 46/241 (19%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVD---IEDVRREVQIMKHLPKHPNI 119
ELG FG Y ++++ K L+ + E+ R E + L +HPN+
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNV 91
Query: 120 VSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAA---AVMKTIVEVVQVCH-- 174
V L D + ++ C G+L + +V R +++ + +K+ +E H
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 175 -----------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP 223
V+H+DL N L +K +K D GL F E+ +
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGL---------FREVYAAD 199
Query: 224 YY------------MAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA 269
YY MAPE ++ + + D+WS GV+L+ + G+ P+ + Q V +
Sbjct: 200 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259
Query: 270 I 270
I
Sbjct: 260 I 260
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 46/241 (19%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVD---IEDVRREVQIMKHLPKHPNI 119
ELG FG Y ++++ K L+ + E+ R E + L +HPN+
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNV 74
Query: 120 VSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAA---AVMKTIVEVVQVCH-- 174
V L D + ++ C G+L + +V R +++ + +K+ +E H
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 175 -----------EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP 223
V+H+DL N L +K +K D GL F E+ +
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGL---------FREVYAAD 182
Query: 224 YY------------MAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQA 269
YY MAPE ++ + + D+WS GV+L+ + G+ P+ + Q V +
Sbjct: 183 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 242
Query: 270 I 270
I
Sbjct: 243 I 243
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 18/212 (8%)
Query: 102 DVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGEL--FDRIVARGHYTERAA 159
D E IM HPNI+ L+ IV E E G L F R G +T
Sbjct: 96 DFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQL 153
Query: 160 AAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--PGEQFN 217
+++ + ++ + G +HRDL N L + K DFGLS P +
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVC---KVSDFGLSRVLEDDPDAAYT 210
Query: 218 EIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRS 273
G P + APE + R + DVWS GV+++ +L G P+W T + V I S
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV----ISS 266
Query: 274 VIDFKRDPWPKVSENA-KDLVKKMLNPDPKQR 304
V + R P P +A L+ + D QR
Sbjct: 267 VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRT---AVDIEDVRREVQIMKHLPKH 116
G+ LG G FG T G++ A ++ K L++ A + E + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 117 PNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVAR-----------GHYTERAAAA---- 161
NIV+L V ++ E C G+L + + + H E ++
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 162 -VMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIV 220
+ + + + +HRD+ N L N + K DFGL+ N IV
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIM--NDSNYIV 224
Query: 221 GSPY-----YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPF 258
+MAPE + Y + DVWS G++L+ I G+ P+
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPK 115
+LG+ LGRG FG + ++++ K L+ + R E++I+ H+
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 116 HPNIVSLKDT-YEDDSAVHIVMELCEGGELFDRI------------VARGHYTERAAAAV 162
H N+V+L + + +++E C+ G L + + + T
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 163 MKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIV 220
+ + ++ + +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 221 GSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVIDF 277
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R + +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRLKEG 263
Query: 278 KRDPWPKVSENAKDLVKKMLN---PDPKQRLTAEEVLEH 313
R P + ++ + ML+ +P QR T E++EH
Sbjct: 264 TRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 96/235 (40%), Gaps = 38/235 (16%)
Query: 57 DYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRT---AVDIEDVRREVQIMKHL 113
+ G+ LG G FG T G++ A ++ K L++ A + E + E++IM HL
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRI-----------VARGHYTE------ 156
+H NIV+L V ++ E C G+L + + +A G E
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 157 ------RAAAAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFF 210
R + + + + +HRD+ N L N + K DFGL+
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDI 208
Query: 211 RPGEQFNEIVGSPY-----YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPF 258
N IV +MAPE + Y + DVWS G++L+ I G+ P+
Sbjct: 209 M--NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 60 LGRELGRGEFGVTYL--CTDVNNGE---KFACKSISKK-KLRTAVDIEDVRREVQIMKHL 113
L RELG+G FG+ Y D+ GE + A K++++ LR ++ + E +MK
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN---EASVMKGF 77
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
H ++V L +VMEL G+L + + E T+ E++Q+
Sbjct: 78 TCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 174 HE----------QGVMHRDLKPENFLFANKKESSPLKAIDFGL------SVFFRPGEQFN 217
E + +HRDL N + A+ +K DFG+ + ++R G +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETAYYRKGGKGL 193
Query: 218 EIVGSPYYMAPEVLKRN-YGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVA-QAIIRSV 274
V +MAPE LK + D+WS GV+L+ I P+ QG++ + +++ V
Sbjct: 194 LPV---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY-----QGLSNEQVLKFV 245
Query: 275 IDFKRDPWP-KVSENAKDLVKKMLNPDPKQRLTAEEVL 311
+D P E DL++ +PK R T E++
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 37 STVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR- 95
S V +L++P + + LG+ LG GEFG T + + +++ K L+
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 96 --TAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELF-----DRI 148
+ ++ D+ E ++K + HP+++ L D + +++E + G L R
Sbjct: 64 NASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 149 VARG--------------HYTERAAA-----AVMKTIVEVVQVCHEQGVMHRDLKPENFL 189
V G H ERA + I + +Q E ++HRDL N L
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNIL 182
Query: 190 FANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGS-PY-YMAPEVLKRN-YGPEVDVWSAG 245
A E +K DFGLS + G P +MA E L + Y + DVWS G
Sbjct: 183 VA---EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
Query: 246 VILYILLC-------GVPP 257
V+L+ ++ G+PP
Sbjct: 240 VLLWEIVTLGGNPYPGIPP 258
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 59 DLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPK 115
+LG+ LGRG FG + ++++ K L+ + R E++I+ H+
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 116 HPNIVSLKDT-YEDDSAVHIVMELCEGGELFDRI------------VARGHYTERAAAAV 162
H N+V+L + + +++E C+ G L + + + T
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 163 MKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIV 220
+ + ++ + +HRDL N L + E + +K DFGL+ ++ P
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 221 GSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVIDF 277
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R + +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFXRRLKEG 263
Query: 278 KRDPWPKVSENAKDLVKKMLN---PDPKQRLTAEEVLEH 313
R P + ++ + ML+ +P QR T E++EH
Sbjct: 264 TRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIE-DVRREVQIMKHLPKHPNIVS 121
+LG+G FG LC G+ K+ + D + D +RE+QI+K L +
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 122 LKDTY-EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH------ 174
+Y ++ +VME G L D + RA + ++ Q+C
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP-----YYMAPE 229
+ +HRDL N L ++ +K DFGL+ P ++ +V P ++ APE
Sbjct: 132 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPE 187
Query: 230 VLKRN-YGPEVDVWSAGVILYILL 252
L N + + DVWS GV+LY L
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 58 YDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHP 117
+ LGR++G G FG YL T++ E+ A K + K + E + +I++ P
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYES--KIYRILQGGTGIP 66
Query: 118 NIVSLKDTYEDDSAVHIVMELCEGGELFDRI-VARGHYTERAAAAVMKTIVEVVQVCHEQ 176
N+ E D V +VM+L G L D + + + ++ V+ H +
Sbjct: 67 NVRWF--GVEGDYNV-LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122
Query: 177 GVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--------PGEQFNEIVGSPYY--- 225
+HRD+KP+NFL + ++ + IDFGL+ +R P + + G+ Y
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV 182
Query: 226 ---MAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGV 266
+ E +R+ D+ S G +L L G P W + G
Sbjct: 183 NTHLGIEQSRRD-----DLESLGYVLMYFLRGSLP-WQGLKAGT 220
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L EE+ L+EAF D +K G IN E +L L + +++ G +
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 416 NYGEFVAVS-----VHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTS-GE 469
++ +FV + M + L AF FD N G I ELR A+ + G
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 138
Query: 470 DVINAIMHDVDTDKDGRISYEEFAVMM 496
I I+ DVD + DGR+ +EEF MM
Sbjct: 139 RDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 350 QVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXX-QNIPEADLQILMEAAD 408
+++AE + V L++AF DTN G+I+ + D++ ++ D
Sbjct: 90 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 149
Query: 409 VDGDGSLNYGEFVAV 423
++GDG +++ EFV +
Sbjct: 150 LNGDGRVDFEEFVRM 164
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 97
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 157
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + + G+ +MA E L+ +
Sbjct: 158 RDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIE-DVRREVQIMKHLPKHPNIVS 121
+LG+G FG LC G+ K+ + D + D +RE+QI+K L +
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 122 LKDTY-EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH------ 174
+Y ++ +VME G L D + RA + ++ Q+C
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP-----YYMAPE 229
+ +HRDL N L ++ +K DFGL+ P ++ +V P ++ APE
Sbjct: 133 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPE 188
Query: 230 VLKRN-YGPEVDVWSAGVILYILL 252
L N + + DVWS GV+LY L
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 37 STVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR- 95
S V +L++P + + LG+ LG GEFG T + + +++ K L+
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 96 --TAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELF-----DRI 148
+ ++ D+ E ++K + HP+++ L D + +++E + G L R
Sbjct: 64 NASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 149 VARG--------------HYTERAAA-----AVMKTIVEVVQVCHEQGVMHRDLKPENFL 189
V G H ERA + I + +Q E ++HRDL N L
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL 182
Query: 190 FANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGS-PY-YMAPEVLKRN-YGPEVDVWSAG 245
A E +K DFGLS + G P +MA E L + Y + DVWS G
Sbjct: 183 VA---EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
Query: 246 VILYILLC-------GVPP 257
V+L+ ++ G+PP
Sbjct: 240 VLLWEIVTLGGNPYPGIPP 258
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIE-DVRREVQIMKHLPKHPNIVS 121
+LG+G FG LC G+ K+ + D + D +RE+QI+K L +
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 122 LKDTY-EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH------ 174
+Y ++ +VME G L D + RA + ++ Q+C
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP-----YYMAPE 229
+ +HRDL N L ++ +K DFGL+ P ++ +V P ++ APE
Sbjct: 145 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPE 200
Query: 230 VLKRN-YGPEVDVWSAGVILYILL 252
L N + + DVWS GV+LY L
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 96
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 156
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + + G+ +MA E L+ +
Sbjct: 157 RDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
Query: 102 DVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGEL--FDRIVARGHYTERAA 159
D E IM HPNI+ L+ IV E E G L F R G +T
Sbjct: 96 DFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQL 153
Query: 160 AAVMKTIVEVVQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFR--PGEQFN 217
+++ + ++ + G +HRDL N L + K DFGLS P
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVC---KVSDFGLSRVLEDDPDAAXT 210
Query: 218 EIVGS-PY-YMAPEVLK-RNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRS 273
G P + APE + R + DVWS GV+++ +L G P+W T + V I S
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV----ISS 266
Query: 274 VIDFKRDPWPKVSENA-KDLVKKMLNPDPKQR 304
V + R P P +A L+ + D QR
Sbjct: 267 VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 60 LGRELGRGEFGVTYL--CTDVNNGE---KFACKSISKK-KLRTAVDIEDVRREVQIMKHL 113
L RELG+G FG+ Y D+ GE + A K++++ LR ++ + E +MK
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN---EASVMKGF 76
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
H ++V L +VMEL G+L + + E T+ E++Q+
Sbjct: 77 TCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 174 HE----------QGVMHRDLKPENFLFANKKESSPLKAIDFGLSV------FFRPGEQFN 217
E + +HRDL N + A+ +K DFG++ ++R G +
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 218 EIVGSPYYMAPEVLKRN-YGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVA-QAIIRSV 274
V +MAPE LK + D+WS GV+L+ I P+ QG++ + +++ V
Sbjct: 193 LPV---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY-----QGLSNEQVLKFV 244
Query: 275 IDFKRDPWP-KVSENAKDLVKKMLNPDPKQRLTAEEVL 311
+D P E DL++ +PK R T E++
Sbjct: 245 MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 94
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 154
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + + G+ +MA E L+ +
Sbjct: 155 RDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 155
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 215
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + + G+ +MA E L+ +
Sbjct: 216 RDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 37 STVVHRLCVLKEPSGQDISIDYDLGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLR- 95
S V +L++P + + LG+ LG GEFG T + + +++ K L+
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 96 --TAVDIEDVRREVQIMKHLPKHPNIVSLKDTYEDDSAVHIVMELCEGGELF-----DRI 148
+ ++ D+ E ++K + HP+++ L D + +++E + G L R
Sbjct: 64 NASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 149 VARG--------------HYTERAAA-----AVMKTIVEVVQVCHEQGVMHRDLKPENFL 189
V G H ERA + I + +Q E ++HRDL N L
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL 182
Query: 190 FANKKESSPLKAIDFGLSV-FFRPGEQFNEIVGS-PY-YMAPEVLKRN-YGPEVDVWSAG 245
A E +K DFGLS + G P +MA E L + Y + DVWS G
Sbjct: 183 VA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
Query: 246 VILYILLC-------GVPP 257
V+L+ ++ G+PP
Sbjct: 240 VLLWEIVTLGGNPYPGIPP 258
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 101
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 161
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + + G+ +MA E L+ +
Sbjct: 162 RDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 219 FTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+LG+G FG ++ T N + A K++ + E +E Q+MK L +H +V L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKL-RHEKLVQL 78
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR-GHYTERAAAAVMKT-IVEVVQVCHEQGVMH 180
++ ++IVME G L D + G Y M I + +H
Sbjct: 79 YAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEV-LKRNYG 236
RDL+ N L E+ K DFGL+ E + G+ + + APE L +
Sbjct: 138 RDLRAANILVG---ENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 237 PEVDVWSAGVILYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+ DVWS G++L L G P+ + V + R ++ P+ E+ DL+ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQ 250
Query: 296 MLNPDPKQRLTAE 308
DP++R T E
Sbjct: 251 CWRKDPEERPTFE 263
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 96
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 156
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + + G+ +MA E L+ +
Sbjct: 157 RDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 60 LGRELGRGEFGVTYL--CTDVNNGE---KFACKSISKK-KLRTAVDIEDVRREVQIMKHL 113
L RELG+G FG+ Y D+ GE + A K++++ LR ++ + E +MK
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN---EASVMKGF 77
Query: 114 PKHPNIVSLKDTYEDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVC 173
H ++V L +VMEL G+L + + E T+ E++Q+
Sbjct: 78 TCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 174 HE----------QGVMHRDLKPENFLFANKKESSPLKAIDFGLSV------FFRPGEQFN 217
E + +HRDL N + A+ +K DFG++ ++R G +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 218 EIVGSPYYMAPEVLKRN-YGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVA-QAIIRSV 274
V +MAPE LK + D+WS GV+L+ I P+ QG++ + +++ V
Sbjct: 194 LPV---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY-----QGLSNEQVLKFV 245
Query: 275 IDFKRDPWP-KVSENAKDLVKKMLNPDPKQRLTAEEVL 311
+D P E DL++ +PK R T E++
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 95
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 155
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 156 RDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIE-DVRREVQIMKHLPKHPNIVS 121
+LG+G FG LC G+ K+ + D + D +RE+QI+K L +
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 122 LKDTY-EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQVCH------ 174
+Y + +VME G L D + RA + ++ Q+C
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 175 EQGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSP-----YYMAPE 229
+ +HRDL N L ++ +K DFGL+ P ++ +V P ++ APE
Sbjct: 129 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPE 184
Query: 230 VLKRN-YGPEVDVWSAGVILYILL 252
L N + + DVWS GV+LY L
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 349 LQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEAD----LQILM 404
L++ + F +E+ L + F+ +D + G ++ ++PE +Q ++
Sbjct: 8 LEMCSHF-DADEIKRLGKRFKKLDLDNSGSLSVEEF--------MSLPELQQNPLVQRVI 58
Query: 405 EAADVDGDGSLNYGEFV-AVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNAL--- 460
+ D DG+G +++ EF+ VS K ++ L AF +D ++ G+I EL L
Sbjct: 59 DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 118
Query: 461 --NDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRK 504
N+ DT + +++ + + D D DGRIS+EEF ++ G D K
Sbjct: 119 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 163
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 429 KMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRIS 488
K ++E L F FD+N G+I++EEL+ L +T ED I +M D D + DGRI
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 489 YEEFAVMMKA 498
Y+EF MK
Sbjct: 62 YDEFLEFMKG 71
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFV 421
L + F M D N G I+ + I E D++ LM+ D + DG ++Y EF+
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 349 LQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEAD----LQILM 404
L++ + F +E+ L + F+ +D + G ++ ++PE +Q ++
Sbjct: 9 LEMCSHF-DADEIKRLGKRFKKLDLDNSGSLSVEEF--------MSLPELQQNPLVQRVI 59
Query: 405 EAADVDGDGSLNYGEFV-AVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNAL--- 460
+ D DG+G +++ EF+ VS K ++ L AF +D ++ G+I EL L
Sbjct: 60 DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 119
Query: 461 --NDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRK 504
N+ DT + +++ + + D D DGRIS+EEF ++ G D K
Sbjct: 120 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 164
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 34/280 (12%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVR---REVQIMKHLPKH 116
LG+ LGRG FG + ++++ K L+ + R E++I+ H+ H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 117 PNIVSLKDT-YEDDSAVHIVMELCEGGELFDRIVA-RGHYTERAAAAVMKTIVEV----- 169
N+V+L + + +++E C+ G L + + R + + K + +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 170 --------VQVCHEQGVMHRDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEI 219
++ + +HRDL N L + E + +K DFGL+ + P
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 220 VGSPY-YMAPE-VLKRNYGPEVDVWSAGVILY-ILLCGVPPFWAETEQGVAQAIIRSVID 276
P +MAPE + R Y + DVWS GV+L+ I G P+ + + R + +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY---PGVKIDEEFCRRLKE 266
Query: 277 FKRDPWPKVSENAKDLVKKMLN---PDPKQRLTAEEVLEH 313
R P + ++ + ML+ +P QR T E++EH
Sbjct: 267 GTRMRAPDYT--TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+LG+G FG ++ T N + A K++ + E +E Q+MK L +H +V L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKL-RHEKLVQL 78
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR-GHYTERAAAAVMKT-IVEVVQVCHEQGVMH 180
++ ++IV+E G L D + G Y M I + +H
Sbjct: 79 YAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEV-LKRNYG 236
RDL+ N L E+ K DFGL+ E + G+ + + APE L +
Sbjct: 138 RDLRAANILVG---ENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 237 PEVDVWSAGVILYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+ DVWS G++L L G P+ + V + R ++ P+ E+ DL+ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQ 250
Query: 296 MLNPDPKQRLTAE 308
DP++R T E
Sbjct: 251 CWRKDPEERPTFE 263
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 429 KMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRIS 488
K +E L F FD+N G+I++EEL+ L +T ED I +M D D + DGRI
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 489 YEEFAVMMKA 498
Y+EF MK
Sbjct: 70 YDEFLEFMKG 79
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFV 421
L + F M D N G I+ + I E D++ LM+ D + DG ++Y EF+
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 97
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 157
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ + + + + G+ +MA E L+ +
Sbjct: 158 RDLAARNCML---DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNI 119
L + +G+GEFG DV G+ + ++ K ++ + E +M L +H N+
Sbjct: 25 LLQTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNL 76
Query: 120 VSLKDTY-EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK---TIVEVVQVCHE 175
V L E+ ++IV E G L D + +RG + ++K + E ++
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY-YMAPEVLK-R 233
+HRDL N L + E + K DFGL+ + + P + APE L+ +
Sbjct: 136 NNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 189
Query: 234 NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
+ + DVWS G++L+ + F R P+P++ KD+V
Sbjct: 190 KFSTKSDVWSFGILLW-----------------------EIYSFGRVPYPRIP--LKDVV 224
Query: 294 K------KMLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
KM PD EV+++ W +A P+
Sbjct: 225 PRVEKGYKMDAPDGCPP-AVYEVMKNCWHLDAAMRPS 260
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L+ E+ ++EAF++ DT+ G I+ + +++ ++ D DG G++
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 416 NYGEFVAV-SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINA 474
++ EF+ + + + + + E + KAF FD + SG I I++LR + + E+ +
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 475 IMHDVDTDKDGRISYEEFAVMMK 497
++ + D + D I +EF +MK
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIMK 164
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 434 EHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFA 493
+ + +AF FD + SG I+ +EL+ A+ ++ I ++ ++D D G I +EEF
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 87
Query: 494 VMMKAGTDWR-------KASRQYSRERFNSISLKLMR 523
MM A R KA R + + +I++K +R
Sbjct: 88 TMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLR 124
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L EE+ L+EAF D +K G IN E +L L + +++ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 416 NYGEFVAVS-----VHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTS-GE 469
++ +FV + M + L AF FD N G I ELR A+ + G
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 470 DVINAIMHDVDTDKDGRISYEEFAVMM 496
I I+ DVD + DGR+ +EEF MM
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 350 QVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXX-QNIPEADLQILMEAAD 408
+++AE + V L++AF DTN G+I+ + D++ ++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 409 VDGDGSLNYGEFVAV 423
++GDG +++ EFV +
Sbjct: 136 LNGDGRVDFEEFVRM 150
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEAD----LQILMEAADVDG 411
+ +E+ L + F+ +D + G ++ ++PE +Q +++ D DG
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEF--------MSLPELQQNPLVQRVIDIFDTDG 52
Query: 412 DGSLNYGEFV-AVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNAL-----NDEVD 465
+G +++ EF+ VS K ++ L AF +D ++ G+I EL L N+ D
Sbjct: 53 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 112
Query: 466 TSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRK 504
T + +++ + + D D DGRIS+EEF ++ G D K
Sbjct: 113 TQLQQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 150
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 429 KMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRIS 488
K +E L F FD+N G+I++EEL+ L +T ED I +M D D + DGRI
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 489 YEEFAVMMKA 498
Y+EF MK
Sbjct: 65 YDEFLEFMKG 74
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFV 421
L + F M D N G I+ + I E D++ LM+ D + DG ++Y EF+
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 434 EHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFA 493
E L F FD+N G+I++EEL+ L +T ED I +M D D + DGRI Y+EF
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 494 VMMKA 498
MK
Sbjct: 65 EFMKG 69
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 364 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFV 421
L + F M D N G I+ + I E D++ LM+ D + DG ++Y EF+
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 60 LGRELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNI 119
L + +G+GEFG DV G+ + ++ K ++ + E +M L +H N+
Sbjct: 10 LLQTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNL 61
Query: 120 VSLKDTY-EDDSAVHIVMELCEGGELFDRIVARGHYTERAAAAVMK---TIVEVVQVCHE 175
V L E+ ++IV E G L D + +RG + ++K + E ++
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 176 QGVMHRDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY-YMAPEVLK-R 233
+HRDL N L + E + K DFGL+ + + P + APE L+ +
Sbjct: 121 NNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 174
Query: 234 NYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLV 293
+ + DVWS G++L+ + F R P+P++ KD+V
Sbjct: 175 KFSTKSDVWSFGILLW-----------------------EIYSFGRVPYPRIP--LKDVV 209
Query: 294 K------KMLNPDPKQRLTAEEVLEHPWLQNAKKAPN 324
KM PD EV+++ W +A P+
Sbjct: 210 PRVEKGYKMDAPDGCPP-AVYEVMKNCWHLDAAMRPS 245
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 114
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 174
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 175 RDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 231
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 232 FTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 400 LQILMEAADVDGDGSLNYGEFV-AVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRN 458
+Q +++ D DG+G +++ EF+ VS K ++ L AF +D ++ G+I EL
Sbjct: 40 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 99
Query: 459 AL-----NDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRK 504
L N+ DT + +++ + + D D DGRIS+EEF ++ G D K
Sbjct: 100 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 149
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 96
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 156
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 157 RDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 21/253 (8%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+LG+G FG ++ T N + A K++ + E +E Q+MK L +H +V L
Sbjct: 25 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKL-RHEKLVQL 78
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR-GHYTERAAAAVMKT-IVEVVQVCHEQGVMH 180
++ ++IV E G L D + G Y M I + +H
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEV-LKRNYG 236
RDL+ N L E+ K DFGL+ E + G+ + + APE L +
Sbjct: 138 RDLRAANILVG---ENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 237 PEVDVWSAGVILYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+ DVWS G++L L G P+ + V + R ++ P+ E+ DL+ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQ 250
Query: 296 MLNPDPKQRLTAE 308
DP++R T E
Sbjct: 251 CWRKDPEERPTFE 263
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 21/253 (8%)
Query: 63 ELGRGEFGVTYLCTDVNNGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+LG+G FG ++ T N + A K++ + E +E Q+MK L +H +V L
Sbjct: 16 KLGQGCFGEVWMGT-WNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKL-RHEKLVQL 69
Query: 123 KDTYEDDSAVHIVMELCEGGELFDRIVAR-GHYTERAAAAVMKT-IVEVVQVCHEQGVMH 180
++ ++IV E G L D + G Y M I + +H
Sbjct: 70 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLSVFFRPGEQFNEIVGSPY---YMAPEV-LKRNYG 236
RDL+ N L E+ K DFGL+ E + G+ + + APE L +
Sbjct: 129 RDLRAANILVG---ENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 184
Query: 237 PEVDVWSAGVILYILLC-GVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSENAKDLVKK 295
+ DVWS G++L L G P+ + V + R ++ P+ E+ DL+ +
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQ 241
Query: 296 MLNPDPKQRLTAE 308
DP++R T E
Sbjct: 242 CWRKDPEERPTFE 254
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 95
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 155
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 156 RDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 94
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 154
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 155 RDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 211
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 91
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 151
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 152 RDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 115
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 175
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 176 RDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 232
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 233 FTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 64 LGRGEFGVTYLCTDVNN-GEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVSL 122
+GRG FG Y T ++N G+K C S ++ ++ E IMK HPN++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSL 96
Query: 123 KD-TYEDDSAVHIVMELCEGGELFDRIVARGHY-TERAAAAVMKTIVEVVQVCHEQGVMH 180
+ + +V+ + G+L + I H T + + + ++ + +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 156
Query: 181 RDLKPENFLFANKKESSPLKAIDFGLS--VFFRPGEQFNEIVGSPY---YMAPEVLK-RN 234
RDL N + E +K DFGL+ ++ + + G+ +MA E L+ +
Sbjct: 157 RDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 235 YGPEVDVWSAGVILYILLC-GVPPF 258
+ + DVWS GV+L+ L+ G PP+
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 356 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSL 415
L EE+ L+EAF D +K G IN E +L L + +++ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 416 NYGEFVAVS-----VHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTS-GE 469
++ +FV + M + L AF FD N G I ELR A+ + G
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 470 DVINAIMHDVDTDKDGRISYEEFAVMM 496
I I+ DVD + DGR+ +EEF MM
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 350 QVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXX-QNIPEADLQILMEAAD 408
+++AE + V L++AF DTN G+I+ + D++ ++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 409 VDGDGSLNYGEFVAV 423
++GDG +++ EFV +
Sbjct: 136 LNGDGRVDFEEFVRM 150
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,670,174
Number of Sequences: 62578
Number of extensions: 663846
Number of successful extensions: 5842
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 1956
Number of HSP's gapped (non-prelim): 1804
length of query: 531
length of database: 14,973,337
effective HSP length: 103
effective length of query: 428
effective length of database: 8,527,803
effective search space: 3649899684
effective search space used: 3649899684
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)