Query         009612
Match_columns 531
No_of_seqs    226 out of 2654
Neff          10.9
Searched_HMMs 46136
Date          Thu Mar 28 15:13:26 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009612.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009612hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.2E-86 4.8E-91  645.3  48.0  452   66-530    25-487 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 3.6E-80 7.8E-85  591.7  41.7  448   66-531    30-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 7.8E-79 1.7E-83  617.0  47.5  462   63-530    53-533 (543)
  4 PLN03234 cytochrome P450 83B1; 100.0 7.4E-78 1.6E-82  607.7  47.7  458   64-530    25-498 (499)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 8.1E-77 1.8E-81  600.6  48.1  463   60-531    27-509 (517)
  6 PTZ00404 cytochrome P450; Prov 100.0 8.6E-77 1.9E-81  597.3  44.6  448   64-530    26-482 (482)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 2.7E-76 5.8E-81  593.0  47.1  458   64-531    28-497 (504)
  8 PLN03112 cytochrome P450 famil 100.0 7.4E-76 1.6E-80  594.9  48.3  465   60-531    25-508 (514)
  9 PLN02183 ferulate 5-hydroxylas 100.0 4.3E-76 9.3E-81  595.1  45.9  449   66-530    35-511 (516)
 10 PLN02966 cytochrome P450 83A1  100.0 3.6E-76 7.9E-81  594.2  45.1  455   66-529    28-498 (502)
 11 PLN02394 trans-cinnamate 4-mon 100.0 1.4E-75   3E-80  591.8  48.0  457   66-531    29-502 (503)
 12 PLN00168 Cytochrome P450; Prov 100.0 4.5E-75 9.7E-80  588.2  48.4  456   66-531    34-517 (519)
 13 PLN02290 cytokinin trans-hydro 100.0 8.6E-76 1.9E-80  594.7  40.7  445   66-531    41-515 (516)
 14 KOG0159 Cytochrome P450 CYP11/ 100.0 1.8E-75   4E-80  545.3  38.4  457   60-531    43-518 (519)
 15 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-75 4.6E-80  581.2  35.9  451   65-531    33-496 (497)
 16 PLN03018 homomethionine N-hydr 100.0 2.7E-73 5.9E-78  571.9  49.6  463   62-530    35-523 (534)
 17 PLN02655 ent-kaurene oxidase   100.0 6.6E-74 1.4E-78  572.4  43.7  449   69-531     1-464 (466)
 18 PLN02169 fatty acid (omega-1)- 100.0 3.6E-73 7.7E-78  569.2  43.8  446   66-530    30-499 (500)
 19 PLN03195 fatty acid omega-hydr 100.0 5.3E-73 1.1E-77  573.8  42.7  455   66-531    29-516 (516)
 20 PLN02500 cytochrome P450 90B1  100.0   2E-72 4.4E-77  565.8  43.8  432   64-529    35-488 (490)
 21 PLN02738 carotene beta-ring hy 100.0 1.2E-71 2.5E-76  565.6  43.4  451   66-531   114-595 (633)
 22 PF00067 p450:  Cytochrome P450 100.0 7.3E-73 1.6E-77  571.1  33.9  445   69-527     1-463 (463)
 23 PLN02774 brassinosteroid-6-oxi 100.0 4.7E-71   1E-75  551.4  41.4  422   66-529    30-462 (463)
 24 PLN02196 abscisic acid 8'-hydr 100.0 4.9E-71 1.1E-75  550.7  41.0  424   63-529    31-461 (463)
 25 PLN02302 ent-kaurenoic acid ox 100.0 4.9E-69 1.1E-73  543.9  45.0  436   63-531    38-488 (490)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 1.7E-69 3.7E-74  538.9  40.8  429   64-531     4-450 (452)
 27 PLN02426 cytochrome P450, fami 100.0 5.6E-69 1.2E-73  537.9  44.1  438   75-531    49-500 (502)
 28 PLN02987 Cytochrome P450, fami 100.0 2.2E-68 4.9E-73  529.4  43.7  434   61-531    24-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.8E-68 3.9E-73  535.5  40.4  449   67-531    12-482 (489)
 30 KOG0684 Cytochrome P450 [Secon 100.0 1.5E-65 3.2E-70  466.5  34.4  438   67-531    31-485 (486)
 31 PLN02648 allene oxide synthase 100.0 1.7E-58 3.7E-63  454.8  30.5  405   64-504    14-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.7E-54 5.9E-59  420.5  33.0  379   90-530    25-410 (411)
 33 PF12273 RCR:  Chitin synthesis  74.2     2.4 5.2E-05   34.0   2.1    7   65-71     30-36  (130)
 34 PF08492 SRP72:  SRP72 RNA-bind  60.2     6.6 0.00014   26.1   1.6    7  448-454    44-50  (59)
 35 PF05952 ComX:  Bacillus compet  53.2      17 0.00037   24.0   2.6   20  348-367     3-22  (57)
 36 PF15050 SCIMP:  SCIMP protein   48.7      55  0.0012   25.2   5.1   27   31-59     17-43  (133)
 37 PF09201 SRX:  SRX;  InterPro:   35.7      34 0.00073   27.2   2.4   24  474-497    18-41  (148)
 38 PF12554 MOZART1:  Mitotic-spin  35.0 1.2E+02  0.0026   19.3   4.5   42  327-368     6-47  (48)
 39 PF12270 Cyt_c_ox_IV:  Cytochro  33.8      71  0.0015   25.7   3.9   19    2-21     80-98  (137)
 40 KOG3506 40S ribosomal protein   29.9      25 0.00054   22.7   0.7   11  467-477    12-22  (56)
 41 PF14129 DUF4296:  Domain of un  29.7 2.2E+02  0.0048   20.7   6.4   47  324-370    30-76  (87)
 42 PF05393 Hum_adeno_E3A:  Human   26.1   1E+02  0.0022   22.3   3.2    6   74-79     66-71  (94)
 43 PHA03049 IMV membrane protein;  25.2   2E+02  0.0043   19.6   4.2   16   32-47      8-23  (68)
 44 TIGR01478 STEVOR variant surfa  24.7      96  0.0021   28.3   3.6   10   41-50    275-284 (295)
 45 PF12508 DUF3714:  Protein of u  24.7      62  0.0013   28.1   2.4   43  383-429    52-94  (200)
 46 PHA03164 hypothetical protein;  24.6 1.1E+02  0.0024   21.3   3.1   10    6-15     44-53  (88)
 47 PF11829 DUF3349:  Protein of u  24.5 2.2E+02  0.0048   21.3   4.9   52  286-341     3-54  (96)
 48 PF02459 Adeno_terminal:  Adeno  24.3 4.6E+02  0.0099   26.6   8.3   89  281-371   331-424 (548)
 49 PF11027 DUF2615:  Protein of u  23.9 2.5E+02  0.0055   21.4   5.1    9   42-50     66-74  (103)
 50 PF08285 DPM3:  Dolichol-phosph  23.4 1.1E+02  0.0025   22.6   3.2   27  345-371    54-80  (91)
 51 COG3096 MukB Uncharacterized p  23.1 9.4E+02    0.02   25.7  17.1   94  104-198   699-803 (1480)
 52 PTZ00370 STEVOR; Provisional    22.0   1E+02  0.0022   28.2   3.3   11   40-50    270-280 (296)
 53 PF05961 Chordopox_A13L:  Chord  21.7 2.6E+02  0.0057   19.2   4.3   17   31-47      7-23  (68)
 54 PF15330 SIT:  SHP2-interacting  21.6 2.3E+02  0.0051   21.7   4.7   12   74-85     45-56  (107)
 55 PRK06789 flagellar motor switc  21.2 1.1E+02  0.0023   21.7   2.5   41  389-431    21-63  (74)
 56 KOG3262 H/ACA small nucleolar   21.0      72  0.0016   26.8   1.9   36  419-456   106-142 (215)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.2e-86  Score=645.30  Aligned_cols=452  Identities=40%  Similarity=0.670  Sum_probs=401.8

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcc-hh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIK-QS  142 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~-~~  142 (531)
                      .+.||||+++|+|||++++.....|+++.+|.++|  ||+|++++| +.++|||+|+++++|+++.  ..|++||.. ..
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~y--Gpi~tl~lG-~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~  101 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKY--GPVFTLRLG-SVPVVVISSYEAAKEVLVKQDLEFADRPDPTAT  101 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHh--CCeEEEEec-CceEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            78999999999999999998445999999999999  999999999 9999999999999999984  889999972 23


Q ss_pred             hhhhh-cccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHH
Q 009612          143 AECLM-FSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       143 ~~~~~-~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  221 (531)
                      ..... .+.+++++.+|+.||.+||.....+++...+++......++++.+++++.+ ...+++||+...+..++.++|+
T Consensus       102 ~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  102 LKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             HHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHH
Confidence            34444 348899999999999999999999999999999998889999999999987 3233899999999999999999


Q ss_pred             HHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchh-hhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhc
Q 009612          222 GSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLP-WMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKN  300 (531)
Q Consensus       222 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (531)
                      +++||.+++..+ .+...++.+.+.+.....+...+.+++| ++.++....+..++++....++..++++.|+++++.. 
T Consensus       181 ~~~fG~rf~~~~-~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-  258 (489)
T KOG0156|consen  181 RMLFGRRFEEED-EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-  258 (489)
T ss_pred             HHHhCCccccCC-chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence            999999998753 3466779999999999999999999999 6777733345777787878889999999999998875 


Q ss_pred             cCCCCCCccHHHHHHhhhcCCC---CCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---cCC
Q 009612          301 STKLGDNADFVDVLLSLEGEEK---LSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---NSK  374 (531)
Q Consensus       301 ~~~~~~~~d~~~~ll~~~~~~~---l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~~~  374 (531)
                      ..  ++..|++|.+++..++++   ++++++.+.+..+++||.|||++|+.|++.+|++||++|+|+|+||+++   ++.
T Consensus       259 ~~--~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~  336 (489)
T KOG0156|consen  259 GD--EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRL  336 (489)
T ss_pred             cc--CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence            21  233899999999866432   8999999999999999999999999999999999999999999999998   455


Q ss_pred             CChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcccc
Q 009612          375 ITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLE  454 (531)
Q Consensus       375 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  454 (531)
                      ++.+|+.+||||+|||+||+|++|++|... +|.+++|+.|+ ||.|||||.|+++.|++|+||++|+||++|+||||++
T Consensus       337 v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~-ph~~~~d~~i~-Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~  414 (489)
T KOG0156|consen  337 VSESDLPKLPYLKAVIKETLRLHPPLPLLL-PRETTEDTKIG-GYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLD  414 (489)
T ss_pred             CChhhhccCHHHHHHHHHHHhcCCCccccc-cccccCCeeEc-CEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcC
Confidence            999999999999999999999999999875 99999999999 9999999999999999999999999999999999999


Q ss_pred             CCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          455 ADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       455 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      .+ +......+++|||.|+|+|||..+|++|+.++++.|+++|+|+++++ ++++++. ++++..+.|+.+...+|
T Consensus       415 ~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  415 SN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPR  487 (489)
T ss_pred             Cc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecC
Confidence            74 22235678999999999999999999999999999999999999987 6777777 47788888998888776


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.6e-80  Score=591.66  Aligned_cols=448  Identities=26%  Similarity=0.418  Sum_probs=354.2

Q ss_pred             CCCCCCCCCCcccccccccCCC-chhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCC--Ccc
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRG-LAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADR--PIK  140 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~-~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~--~~~  140 (531)
                      .+.+|||+++|++||+..+... .......+...++  |+++.++.+ .+|.++|+|||.+++|+..  ++|.++  +..
T Consensus        30 rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~--~~~~G~y~~-~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   30 RRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKY--RPVVGIYEG-RQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             cCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcC--CCEEEEEec-CCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            4599999999999999887643 2344445555555  899999999 9999999999999999983  788884  333


Q ss_pred             hhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          141 QSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       141 ~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      ....+.....++ +...|++||++|..+ +|.||+.+++++.+.+++.++++++.+.+....+..+++.+.+.++|.|||
T Consensus       107 ~d~~~~l~~~~L-f~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI  184 (499)
T KOG0158|consen  107 GDPEDPLSALNL-FFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVI  184 (499)
T ss_pred             CCCCCcccccCc-hhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHH
Confidence            322222222334 566999999999999 899999999999999999999999999987544467889999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHh-hcccc----cccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHH
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFEL-LGAFN----WSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEH  295 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  295 (531)
                      ++++||.+.++..+  ....+...-...+.. .....    ....+|.+...       -+.........+++.+++.++
T Consensus       185 ~~~AfG~~~~s~~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~-------l~~~~~~~~~~~~~~~~v~~~  255 (499)
T KOG0158|consen  185 GSCAFGLDANSLRD--PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP-------LRVKLFPEDVTDFFRKLVNSR  255 (499)
T ss_pred             hHhhcccchhhhcC--chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh-------hhcccChHHHHHHHHHHHHHH
Confidence            99999999987763  233343333333322 11111    12222332222       122233334444444444444


Q ss_pred             HhhhccCCCCCCccHHHHHHhhhcC-------C-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHH
Q 009612          296 RRLKNSTKLGDNADFVDVLLSLEGE-------E-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAE  367 (531)
Q Consensus       296 ~~~~~~~~~~~~~d~~~~ll~~~~~-------~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~E  367 (531)
                      .+..+... ..+.|+++.++++..+       . .+|.+||++++..|++||.||||++|++++|+|++|||+|+|||+|
T Consensus       256 v~~R~~~~-~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreE  334 (499)
T KOG0158|consen  256 VEQREKEN-IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREE  334 (499)
T ss_pred             HHHHHhcC-CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHH
Confidence            33322111 3789999999998753       1 4999999999999999999999999999999999999999999999


Q ss_pred             HHhh--cCC-CChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCC
Q 009612          368 LQAV--NSK-ITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDP  444 (531)
Q Consensus       368 i~~~--~~~-~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp  444 (531)
                      |+++  +.. +|+|.+.+|+||++||+||||+||+++..  .|.|++|+++++++.||||+.|.++.+++||||++||||
T Consensus       335 I~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~--~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~P  412 (499)
T KOG0158|consen  335 IDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL--NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEP  412 (499)
T ss_pred             HHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc--cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCc
Confidence            9999  323 99999999999999999999999999997  899999999987899999999999999999999999999


Q ss_pred             CCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccc-cccccccccCce
Q 009612          445 HVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSE-VLKLSCEMKNPL  523 (531)
Q Consensus       445 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~  523 (531)
                      ++|+||||.+++.. ..++..|+|||.|||.|+|.+||.+|+|+.|++||++|+++..+.....+.. ..+.++.|++++
T Consensus       413 e~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi  491 (499)
T KOG0158|consen  413 EKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGI  491 (499)
T ss_pred             ccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCce
Confidence            99999999987654 3467789999999999999999999999999999999999998832222211 227788999999


Q ss_pred             eEEEeeCC
Q 009612          524 RAVAVDRN  531 (531)
Q Consensus       524 ~v~~~~r~  531 (531)
                      .+++++|+
T Consensus       492 ~Lkl~~r~  499 (499)
T KOG0158|consen  492 WLKLEPRD  499 (499)
T ss_pred             EEEEEeCC
Confidence            99999995


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=7.8e-79  Score=617.02  Aligned_cols=462  Identities=25%  Similarity=0.417  Sum_probs=367.3

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCc-hhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCc
Q 009612           63 QRGSVAIPGPKGVPLFGSLFTLSRGL-AHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPI  139 (531)
Q Consensus        63 ~~~~~~~PgP~~~p~iG~~~~~~~~~-~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~  139 (531)
                      +++.+.||||+++|++||++.+..+. .+..+.+|.++|| ++||++++| ++++|+|+||+.+++||.+  ..|.+|+.
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg-~~i~~~~~G-~~~~vvv~dpe~ikevl~~~~~~f~~rp~  130 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELN-TEIACVRLG-NTHVIPVTCPKIAREIFKQQDALFASRPL  130 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhC-CceEEEEcC-CcceEEECCHHHHHHHHHhcchhhcCCCc
Confidence            34567899999999999998875333 4778999999993 289999999 9999999999999999984  56888875


Q ss_pred             chhhhhhhcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHH
Q 009612          140 KQSAECLMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALN  218 (531)
Q Consensus       140 ~~~~~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  218 (531)
                      .........| .++++..+|+.|+++||.+.++++++..++.+.+.++++++.+++.+.+...+++++|+.+.+.+++++
T Consensus       131 ~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  210 (543)
T PLN02971        131 TYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGN  210 (543)
T ss_pred             ccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHH
Confidence            4322211112 224567799999999999977788887777888989999999998887654456689999999999999


Q ss_pred             HHHHHHhccccccCC---CchhHHHHHHHHHHHHHhhc---ccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHH
Q 009612          219 NIMGSVFGVRYDIDR---DSKSLQELTEMVREGFELLG---AFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGII  292 (531)
Q Consensus       219 vi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i  292 (531)
                      ++++++||.++...+   +++...+..+.+...+....   ...+.+++|+++++. ..+..+...+..+.+.+++.+.|
T Consensus       211 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i  289 (543)
T PLN02971        211 AIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPII  289 (543)
T ss_pred             HHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHH
Confidence            999999999874321   01112223333343332211   122345667665541 11334455566777888899999


Q ss_pred             HHHHhhhccCCCCCCccHHHHHHhhhcCC---CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 009612          293 EEHRRLKNSTKLGDNADFVDVLLSLEGEE---KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQ  369 (531)
Q Consensus       293 ~~~~~~~~~~~~~~~~d~~~~ll~~~~~~---~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~  369 (531)
                      +++++..+.+......|+++.+++..+++   .++++++.+++.++++||+|||+++++|++++|+.||++|+|+|+||+
T Consensus       290 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        290 DERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            88765433221123579999999865432   499999999999999999999999999999999999999999999999


Q ss_pred             hh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCC
Q 009612          370 AV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHV  446 (531)
Q Consensus       370 ~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~  446 (531)
                      ++   ++.++++++++|||++|||+|+||++|+++... +|.+.+|++++ ||.||||+.|+++.+++||||++|+||++
T Consensus       370 ~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~-~r~~~~d~~~~-G~~IpkGt~v~~~~~~~~~d~~~~~dP~~  447 (543)
T PLN02971        370 RVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNL-PHVALSDTTVA-GYHIPKGSQVLLSRYGLGRNPKVWSDPLS  447 (543)
T ss_pred             HHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCc-ceecCCCeeEC-CEEECCCCEEEECcHHhcCChhhCCCccc
Confidence            98   467999999999999999999999999999743 89999999999 99999999999999999999999999999


Q ss_pred             CCCCccccCCcC--CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC-CCCccccccccccccCce
Q 009612          447 FKPERFLEADVD--VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS-PADLSEVLKLSCEMKNPL  523 (531)
Q Consensus       447 F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~  523 (531)
                      |+||||++++..  ....+..|+|||.|+|.|+|++||++|+++++|+|+++|+|+++++. +.++.+..+ ++..++++
T Consensus       448 F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~  526 (543)
T PLN02971        448 FKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPL  526 (543)
T ss_pred             cCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccc
Confidence            999999975422  11234579999999999999999999999999999999999988754 567777766 77556899


Q ss_pred             eEEEeeC
Q 009612          524 RAVAVDR  530 (531)
Q Consensus       524 ~v~~~~r  530 (531)
                      .|.+++|
T Consensus       527 ~~~~~~~  533 (543)
T PLN02971        527 VMVGELR  533 (543)
T ss_pred             eeeeeec
Confidence            9999998


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=7.4e-78  Score=607.71  Aligned_cols=458  Identities=27%  Similarity=0.544  Sum_probs=377.3

Q ss_pred             CCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcch
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQ  141 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~  141 (531)
                      ++.+.||||+++|++||++.+...+++.++.+++++|  |++|++++| ++++|+++||+++++|+.+  ..|.+++...
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~y--G~~~~~~lg-~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~  101 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLY--GPIFTMKIG-GRRLAVISSAELAKELLKTQDLNFTARPLLK  101 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHc--CCeEEEEec-CcCEEEECCHHHHHHHHHhCCccccCCCCch
Confidence            3367899999999999999886446788999999999  899999999 9999999999999999974  5677777643


Q ss_pred             hhhhh-hcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          142 SAECL-MFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       142 ~~~~~-~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      ..... ..+..+.+...++.|+++||.+..++|++.+++.+.+.+.++++++++++.+...+++++|+.+.+..+++|++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi  181 (499)
T PLN03234        102 GQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVV  181 (499)
T ss_pred             hhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHH
Confidence            33221 22444445567899999999865789999999999999999999999999876556778999999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhc
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKN  300 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (531)
                      +.++||.+++..+  +...++.+.+.+.........+...+|++..+....+..++..++.+.+.+++.++|+++++...
T Consensus       182 ~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (499)
T PLN03234        182 CRQAFGKRYNEYG--TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR  259 (499)
T ss_pred             HHHHhCCcccccc--hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999987543  34556666666655443333344455655443212334467778889999999999988765432


Q ss_pred             cCCCCCCccHHHHHHhhhcCC----CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---cC
Q 009612          301 STKLGDNADFVDVLLSLEGEE----KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---NS  373 (531)
Q Consensus       301 ~~~~~~~~d~~~~ll~~~~~~----~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~~  373 (531)
                      .+  .+..|+++.+++..+++    .++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++++   ++
T Consensus       260 ~~--~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~  337 (499)
T PLN03234        260 PK--QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKG  337 (499)
T ss_pred             cC--CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence            22  24578999998765432    48999999999999999999999999999999999999999999999998   35


Q ss_pred             CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC-CCCCCCCCCcc
Q 009612          374 KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW-EDPHVFKPERF  452 (531)
Q Consensus       374 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~  452 (531)
                      .++++++++|||++|||+|+||++|+++... +|.+.+|++++ ||.|||||.|.++.+++||||++| +||++||||||
T Consensus       338 ~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~-~R~~~~d~~~~-g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~  415 (499)
T PLN03234        338 YVSEEDIPNLPYLKAVIKESLRLEPVIPILL-HRETIADAKIG-GYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERF  415 (499)
T ss_pred             CCCHHHHhcChHHHHHHHHHhccCCCccccC-CcccCCCeeEC-CEEECCCCEEEEehHhhhCCcccccCChhhcCchhh
Confidence            6899999999999999999999999999853 69999999998 999999999999999999999999 89999999999


Q ss_pred             ccCCcC--CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC-C--CCccccccccccccCceeEEE
Q 009612          453 LEADVD--VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS-P--ADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       453 l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~-~--~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      ++++..  .......++|||.|+|+|+|+++|++|+++++|.|+++|+|++.++. +  ...+...++++.|++++.+..
T Consensus       416 l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (499)
T PLN03234        416 MKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAP  495 (499)
T ss_pred             cCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEe
Confidence            975422  12235679999999999999999999999999999999999998762 2  344456788888889888888


Q ss_pred             eeC
Q 009612          528 VDR  530 (531)
Q Consensus       528 ~~r  530 (531)
                      ++|
T Consensus       496 ~~~  498 (499)
T PLN03234        496 TKH  498 (499)
T ss_pred             ecC
Confidence            776


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=8.1e-77  Score=600.58  Aligned_cols=463  Identities=32%  Similarity=0.573  Sum_probs=378.3

Q ss_pred             CCCCCCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCC
Q 009612           60 GRNQRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADR  137 (531)
Q Consensus        60 ~~~~~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~  137 (531)
                      +.+++..+.||||+++|++||++.+. .+++..+.+|+++|  |++|++++| ++++|+++||+++++++.+  ..|.++
T Consensus        27 ~~~~~~~~~pPgp~~~P~iG~~~~~~-~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~~p~~~~~il~~~~~~f~~r  102 (517)
T PLN02687         27 GSGKHKRPLPPGPRGWPVLGNLPQLG-PKPHHTMAALAKTY--GPLFRLRFG-FVDVVVAASASVAAQFLRTHDANFSNR  102 (517)
T ss_pred             cCCCCCCCCCccCCCCCccccHHhcC-CchhHHHHHHHHHh--CCeeEEecC-CceEEEeCCHHHHHHHHHhcchhhhcC
Confidence            44455567899999999999998886 56889999999999  899999999 9999999999999999984  577777


Q ss_pred             Ccchhhhhhh-cccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 009612          138 PIKQSAECLM-FSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAA  216 (531)
Q Consensus       138 ~~~~~~~~~~-~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  216 (531)
                      +......... .+.+++++.+|+.|+++||.+..++|+.++++.+.+.++++++++++.+.+.. +++++|+.+.+..++
T Consensus       103 ~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t  181 (517)
T PLN02687        103 PPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCT  181 (517)
T ss_pred             CCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHH
Confidence            6544322221 13455677789999999999954889999999999999999999999997653 456899999999999


Q ss_pred             HHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHH
Q 009612          217 LNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHR  296 (531)
Q Consensus       217 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  296 (531)
                      +|+++.++||.++...+.++....+.+.+...+..........++|++.++. +.+..++..+..+.+.+++.+++++++
T Consensus       182 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~r~  260 (517)
T PLN02687        182 TNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLD-LQGVVGKMKRLHRRFDAMMNGIIEEHK  260 (517)
T ss_pred             HHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhC-cccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998654322345567777766665444333335667665542 222345566677888899999999887


Q ss_pred             hhhccCCCCCCccHHHHHHhhhcC-------CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 009612          297 RLKNSTKLGDNADFVDVLLSLEGE-------EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQ  369 (531)
Q Consensus       297 ~~~~~~~~~~~~d~~~~ll~~~~~-------~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~  369 (531)
                      +....+. +...|+++.+++..++       ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       261 ~~~~~~~-~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~  339 (517)
T PLN02687        261 AAGQTGS-EEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELD  339 (517)
T ss_pred             HhccccC-cccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            6543211 2457999999986432       2599999999999999999999999999999999999999999999999


Q ss_pred             hh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCC
Q 009612          370 AV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHV  446 (531)
Q Consensus       370 ~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~  446 (531)
                      ++   ++.++++++++||||+|||+||||++|+++... +|.+.+|++++ ||.||||+.|.++.+++||||++|+||++
T Consensus       340 ~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~-~R~~~~d~~~~-g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~  417 (517)
T PLN02687        340 AVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSL-PRMAAEECEIN-GYHIPKGATLLVNVWAIARDPEQWPDPLE  417 (517)
T ss_pred             HHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccc-cccCCCCeeEC-CEEECCCCEEEEecHHhcCCcccCCCccc
Confidence            98   456899999999999999999999999999733 89999999999 99999999999999999999999999999


Q ss_pred             CCCCccccCCcC----CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC---CCccccccccccc
Q 009612          447 FKPERFLEADVD----VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP---ADLSEVLKLSCEM  519 (531)
Q Consensus       447 F~P~R~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~  519 (531)
                      |+||||++++..    ....+..++|||.|+|.|+|++||++|+++++|+|+++|++++.++..   .+.....++++.+
T Consensus       418 F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  497 (517)
T PLN02687        418 FRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQR  497 (517)
T ss_pred             CCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeec
Confidence            999999975321    112345799999999999999999999999999999999999886532   2333344566677


Q ss_pred             cCceeEEEeeCC
Q 009612          520 KNPLRAVAVDRN  531 (531)
Q Consensus       520 ~~~~~v~~~~r~  531 (531)
                      ..++.|++++|.
T Consensus       498 ~~~~~~~~~~R~  509 (517)
T PLN02687        498 AVPLMVHPRPRL  509 (517)
T ss_pred             CCCeEEeeccCC
Confidence            788999999883


No 6  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=8.6e-77  Score=597.32  Aligned_cols=448  Identities=22%  Similarity=0.371  Sum_probs=361.8

Q ss_pred             CCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcch
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQ  141 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~  141 (531)
                      ...+.+|||+++|++||++.+. .+++..+.+++++|  |++|++++| ++++|+++||+++++|+.+  +.|.+++...
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~y--G~i~~~~~g-~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~  101 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLG-NLPHRDLTKMSKKY--GGIFRIWFA-DLYTVVLSDPILIREMFVDNFDNFSDRPKIP  101 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhc-ccHHHHHHHHHHHh--CCeeEEEec-CCCEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            3467899999999999998886 47899999999999  899999999 8999999999999999984  4566666544


Q ss_pred             hhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHH
Q 009612          142 SAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       142 ~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  221 (531)
                      ......++++++. .+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++.+++.+.+....++.+|+.+++.++++|+++
T Consensus       102 ~~~~~~~~~~l~~-~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  179 (482)
T PTZ00404        102 SIKHGTFYHGIVT-SSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMF  179 (482)
T ss_pred             eeeeeccCCceec-cChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Confidence            3322234677654 5999999999999 7889999999999999999999999998655456779999999999999999


Q ss_pred             HHHhccccccCCC--chhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          222 GSVFGVRYDIDRD--SKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       222 ~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      .++||.+++..++  ++....+.+.+...+...........++++..+  .....+...+..+.+.+++++.++++++..
T Consensus       180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  257 (482)
T PTZ00404        180 KYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL--YYQYLEHTDKNFKKIKKFIKEKYHEHLKTI  257 (482)
T ss_pred             HHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            9999998875431  122355666666666544333333333333322  111222334456677777777777665432


Q ss_pred             ccCCCCCCccHHHHHHhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---cCCC
Q 009612          300 NSTKLGDNADFVDVLLSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---NSKI  375 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~~~~  375 (531)
                      +.   ....|+++.++++..+. ....+++++++..+++||+|||+++++|++++|++||++|+|+++|++++   +..+
T Consensus       258 ~~---~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~  334 (482)
T PTZ00404        258 DP---EVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKV  334 (482)
T ss_pred             CC---CCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCC
Confidence            21   24579999999874321 22233588999999999999999999999999999999999999999998   3568


Q ss_pred             ChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceee-cCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcccc
Q 009612          376 TDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQL-SNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLE  454 (531)
Q Consensus       376 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i-~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  454 (531)
                      +++++++|||++|||+||||++|+++... +|.+.+|+++ + ||.||||+.|+++.+++||||++||||++|+||||++
T Consensus       335 ~~~~l~~L~yl~avi~EtlRl~p~~~~~~-~R~~~~d~~l~~-g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~  412 (482)
T PTZ00404        335 LLSDRQSTPYTVAIIKETLRYKPVSPFGL-PRSTSNDIIIGG-GHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLN  412 (482)
T ss_pred             CccccccChHHHHHHHHHHHhcCCccccc-ceeccCCEEecC-CeEECCCCEEEeeHHHhhCCccccCCccccCccccCC
Confidence            99999999999999999999999999633 8999999999 6 9999999999999999999999999999999999996


Q ss_pred             CCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          455 ADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       455 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      +.     .+..|+|||.|+|.|+|++||++|++++++.++++|+++++++.+.......+++++| +++.|.+++|
T Consensus       413 ~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R  482 (482)
T PTZ00404        413 PD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLKP-NKFKVLLEKR  482 (482)
T ss_pred             CC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeecC-CCceeeeecC
Confidence            42     3457999999999999999999999999999999999998776554444455677774 8899999987


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.7e-76  Score=593.01  Aligned_cols=458  Identities=31%  Similarity=0.557  Sum_probs=375.6

Q ss_pred             CCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcch
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQ  141 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~  141 (531)
                      ++.+.||||+++|++||++.+. ..++.++.+++++|  |+||++++| ++++|+|+||+++++++.+  ..|++++...
T Consensus        28 ~~~~~pPgp~~~Pl~G~l~~~~-~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~  103 (504)
T PLN00110         28 PSRKLPPGPRGWPLLGALPLLG-NMPHVALAKMAKRY--GPVMFLKMG-TNSMVVASTPEAARAFLKTLDINFSNRPPNA  103 (504)
T ss_pred             ccCCCcccCCCCCeeechhhcC-CchHHHHHHHHHHh--CCeEEEEcC-CccEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            3356799999999999988775 56889999999999  899999999 8999999999999999984  5677777544


Q ss_pred             hhhhhhcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          142 SAECLMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       142 ~~~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      .......+ .+.+++.+|+.|+++||.+..++|++++++.+.+.+.++++.+++.+.+...+++++|+.+++..+++|++
T Consensus       104 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi  183 (504)
T PLN00110        104 GATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMI  183 (504)
T ss_pred             chhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHH
Confidence            33322333 34456678999999999996568999999999999999999999999765556778999999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhc
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKN  300 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (531)
                      +.++||.++.... .....++.+++...+.......+..++|++.++. ..+..+++.+..+.+.+++.+.++++++...
T Consensus       184 ~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  261 (504)
T PLN00110        184 GQVILSRRVFETK-GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMKHLHKKFDKLLTRMIEEHTASAH  261 (504)
T ss_pred             HHHHhCCcccccC-chhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999873221 1234567777766655443333445667665541 1223455666777888888888888765433


Q ss_pred             cCCCCCCccHHHHHHhhhcC---CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---cCC
Q 009612          301 STKLGDNADFVDVLLSLEGE---EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---NSK  374 (531)
Q Consensus       301 ~~~~~~~~d~~~~ll~~~~~---~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~~~  374 (531)
                      ..  ....|+++.+++..++   .+++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++   ++.
T Consensus       262 ~~--~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~  339 (504)
T PLN00110        262 ER--KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRR  339 (504)
T ss_pred             cc--ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence            22  2356999999976432   359999999999999999999999999999999999999999999999998   356


Q ss_pred             CChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcccc
Q 009612          375 ITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLE  454 (531)
Q Consensus       375 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  454 (531)
                      ++++++++|||++|||+||||++|+++... +|.+.+|++++ ||.||||+.|.++.+++|+||++|+||++|+||||++
T Consensus       340 ~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~R~~~~d~~~~-g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~  417 (504)
T PLN00110        340 LVESDLPKLPYLQAICKESFRKHPSTPLNL-PRVSTQACEVN-GYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLS  417 (504)
T ss_pred             CCHHHhhcChHHHHHHHHHhcCCCCccccc-ccccCCCeeeC-CEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccC
Confidence            899999999999999999999999999743 89999999998 9999999999999999999999999999999999997


Q ss_pred             CCcCC---CCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          455 ADVDV---RGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       455 ~~~~~---~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      ++...   ......++|||.|+|.|+|++||++|+++++|+|+++|++++.++.+.+.....++++.|+.++.|++++|.
T Consensus       418 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        418 EKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             CCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            53211   112347999999999999999999999999999999999999876555554556788889999999999983


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=7.4e-76  Score=594.85  Aligned_cols=465  Identities=33%  Similarity=0.583  Sum_probs=377.0

Q ss_pred             CCCCCCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCC
Q 009612           60 GRNQRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADR  137 (531)
Q Consensus        60 ~~~~~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~  137 (531)
                      ++.+++.+.||||+++|++||++.+. .+++..+.+++++|  |++|++++| +.++|+++||+.+++|+.+  ..|+++
T Consensus        25 ~~~~~~~~~ppgp~~~pl~G~~~~~~-~~~~~~~~~~~~ky--G~v~~~~~g-~~~~v~v~dpe~~~~vl~~~~~~f~~~  100 (514)
T PLN03112         25 ASMRKSLRLPPGPPRWPIVGNLLQLG-PLPHRDLASLCKKY--GPLVYLRLG-SVDAITTDDPELIREILLRQDDVFASR  100 (514)
T ss_pred             ccccCCCCCccCCCCCCeeeeHHhcC-CchHHHHHHHHHHh--CCeEEEEec-CccEEEECCHHHHHHHHHhCCcccccC
Confidence            34555667899999999999998886 56889999999999  899999999 8999999999999999963  567776


Q ss_pred             Ccchhhhhhhccc-ceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 009612          138 PIKQSAECLMFSR-AIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAA  216 (531)
Q Consensus       138 ~~~~~~~~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  216 (531)
                      +.........+|. .+++..+|+.|+++||.+..++|++.+++.+.+.+.++++.+++.+.+....++++|+.+.++.++
T Consensus       101 ~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~  180 (514)
T PLN03112        101 PRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFS  180 (514)
T ss_pred             CCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHH
Confidence            6543322233442 334566899999999997678899999999999999999999998876544567899999999999


Q ss_pred             HHHHHHHHhccccccCCC--chhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHH
Q 009612          217 LNNIMGSVFGVRYDIDRD--SKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEE  294 (531)
Q Consensus       217 ~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (531)
                      +++++.++||.++.....  .+....+.+++...+..........++|++.++. +.+..++..+..+.+.+++++.+++
T Consensus       181 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  259 (514)
T PLN03112        181 MNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLD-PYGCEKKMREVEKRVDEFHDKIIDE  259 (514)
T ss_pred             HHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcC-cccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998754321  1234556666666654433333445567665542 2233456667788888899999988


Q ss_pred             HHhhhccCC-CCCCccHHHHHHhhhcCC---CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q 009612          295 HRRLKNSTK-LGDNADFVDVLLSLEGEE---KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQA  370 (531)
Q Consensus       295 ~~~~~~~~~-~~~~~d~~~~ll~~~~~~---~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  370 (531)
                      +++..+... ..+..|+++.++++.+++   .++++++.+++..+++||+|||+++++|++++|++||++|+|+++||++
T Consensus       260 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~  339 (514)
T PLN03112        260 HRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDS  339 (514)
T ss_pred             HHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            776533211 124569999999864432   4899999999999999999999999999999999999999999999999


Q ss_pred             h---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCC
Q 009612          371 V---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVF  447 (531)
Q Consensus       371 ~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F  447 (531)
                      +   ++.++++++++|||++|||+||+|++|+++... +|.+.+|+.++ ||.||||+.|.++.+++||||++|+||++|
T Consensus       340 ~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~-~R~~~~d~~i~-g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F  417 (514)
T PLN03112        340 VVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLI-PHESLRATTIN-GYYIPAKTRVFINTHGLGRNTKIWDDVEEF  417 (514)
T ss_pred             hcCCCCcCChhhhccCcHHHHHHHHHhccCCCccccc-ccccCCCeeEc-CEEeCCCCEEEEehHHhhCCcccCCChhhc
Confidence            8   456899999999999999999999999999743 79999999999 999999999999999999999999999999


Q ss_pred             CCCccccCCcC---C-CCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC---CCCcccccccccccc
Q 009612          448 KPERFLEADVD---V-RGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS---PADLSEVLKLSCEMK  520 (531)
Q Consensus       448 ~P~R~l~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~  520 (531)
                      +||||.++...   . ......++|||.|+|+|+|++||++|+++++++|+++|+|++.++.   ++......++++.+.
T Consensus       418 ~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (514)
T PLN03112        418 RPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKA  497 (514)
T ss_pred             CCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccC
Confidence            99998754211   1 1124579999999999999999999999999999999999987542   234444557787788


Q ss_pred             CceeEEEeeCC
Q 009612          521 NPLRAVAVDRN  531 (531)
Q Consensus       521 ~~~~v~~~~r~  531 (531)
                      +++.++++||.
T Consensus       498 ~~~~~~~~~r~  508 (514)
T PLN03112        498 KPLRAVATPRL  508 (514)
T ss_pred             CCeEEEeecCC
Confidence            99999999994


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=4.3e-76  Score=595.15  Aligned_cols=449  Identities=32%  Similarity=0.604  Sum_probs=360.5

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~  143 (531)
                      .+.||||+++|++||++.+. ...+..+.+|+++|  |++|++++| ++++|+|+||+++++|+.+  ..|+.++.....
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~-~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMD-QLTHRGLANLAKQY--GGLFHMRMG-YLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcC-CcchHHHHHHHHHh--CCeeEEEeC-CcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            46899999999999998775 45677899999999  899999999 9999999999999999984  557777653322


Q ss_pred             hhhhcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          144 ECLMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       144 ~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      .....+ .+.+++.+|+.|+++||.+..++|+.+.++.+.+. .++++.+++++...  .++++|+.+.+..+++|++++
T Consensus       111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~  187 (516)
T PLN02183        111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYR  187 (516)
T ss_pred             hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHh
Confidence            222221 33446679999999999965788999999888885 56889999998642  467899999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      ++||.+++..     ..++.+.+...............+|++.++. +....++..+..+.+.+++.+.++++.+....+
T Consensus       188 ~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (516)
T PLN02183        188 AAFGSSSNEG-----QDEFIKILQEFSKLFGAFNVADFIPWLGWID-PQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQ  261 (516)
T ss_pred             HhhcCcccch-----HHHHHHHHHHHHHHhCCccHHHhcchhHhcc-cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999876532     2345555555544443334445667665541 223345666777888888888888776543221


Q ss_pred             -----CCCCCccHHHHHHhhhcC-------------CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHH
Q 009612          303 -----KLGDNADFVDVLLSLEGE-------------EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKL  364 (531)
Q Consensus       303 -----~~~~~~d~~~~ll~~~~~-------------~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l  364 (531)
                           ..+...|+++.++++.++             ..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       262 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl  341 (516)
T PLN02183        262 NADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRV  341 (516)
T ss_pred             ccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence                 001346899999975321             24899999999999999999999999999999999999999999


Q ss_pred             HHHHHhh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC
Q 009612          365 HAELQAV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW  441 (531)
Q Consensus       365 ~~Ei~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~  441 (531)
                      ++|++++   ++.++.+++++|||++|||+||||++|+++..  .|.+.+|++++ ||.||||+.|.++.+++||||++|
T Consensus       342 ~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~--~r~~~~d~~l~-g~~IPkGt~V~~~~~~~hrd~~~~  418 (516)
T PLN02183        342 QQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL--LHETAEDAEVA-GYFIPKRSRVMINAWAIGRDKNSW  418 (516)
T ss_pred             HHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce--eeeccCceeEC-CEEECCCCEEEEehhhhcCCcccc
Confidence            9999998   35689999999999999999999999999997  79999999999 999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCcC-CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC---CCccccccccc
Q 009612          442 EDPHVFKPERFLEADVD-VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP---ADLSEVLKLSC  517 (531)
Q Consensus       442 ~dp~~F~P~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~  517 (531)
                      +||++|+||||++++.. .......|+|||.|+|+|+|++||++|+++++|+|+++|++++.++..   .+.....+.+.
T Consensus       419 ~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  498 (516)
T PLN02183        419 EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTA  498 (516)
T ss_pred             CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccccc
Confidence            99999999999975432 122445799999999999999999999999999999999999877642   33333446665


Q ss_pred             cccCceeEEEeeC
Q 009612          518 EMKNPLRAVAVDR  530 (531)
Q Consensus       518 ~~~~~~~v~~~~r  530 (531)
                      .+..++.+.+++|
T Consensus       499 ~~~~~~~~~~~~r  511 (516)
T PLN02183        499 PRATRLVAVPTYR  511 (516)
T ss_pred             ccCCCcEEEeecC
Confidence            5667888888887


No 10 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.6e-76  Score=594.23  Aligned_cols=455  Identities=28%  Similarity=0.522  Sum_probs=360.8

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~  143 (531)
                      .+.||||+++|++||++.+...+++..+.+|+++|  |++|++++| ++++|+++||+.+++|+.+  ..|.+++.....
T Consensus        28 ~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~y--G~v~~~~~g-~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~  104 (502)
T PLN02966         28 YKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKY--GPILSYRIG-SRTMVVISSAELAKELLKTQDVNFADRPPHRGH  104 (502)
T ss_pred             CCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHh--CCeEEEecC-CCcEEEECCHHHHHHHHHhCcccccCCCCCccc
Confidence            56799999999999999886457889999999999  899999999 8999999999999999984  456655543222


Q ss_pred             hhhhcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          144 ECLMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       144 ~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      .....| .++.+..+|+.|+++|+.+.+++|++.+++.+.+.+.++++++++.+.+...+++++|+.+++..+++|+++.
T Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~  184 (502)
T PLN02966        105 EFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCR  184 (502)
T ss_pred             eeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHH
Confidence            111123 2344555799999999995588999999999999999999999999987655567899999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      ++||.+++..+  +....+.+++...........+..++|++..+....+..+......+...+++.+.++++.......
T Consensus       185 ~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (502)
T PLN02966        185 QAFGKKYNEDG--EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK  262 (502)
T ss_pred             HHhCCccCccc--hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999987544  3455666666665544443334455565433211111223334455566677777776654332111


Q ss_pred             CCCCCccHHHHHHhhhcC----CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-c----C
Q 009612          303 KLGDNADFVDVLLSLEGE----EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-N----S  373 (531)
Q Consensus       303 ~~~~~~d~~~~ll~~~~~----~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~----~  373 (531)
                        .+..|+++.++++.++    ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++ +    +
T Consensus       263 --~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~  340 (502)
T PLN02966        263 --PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGST  340 (502)
T ss_pred             --cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCC
Confidence              1356899999976543    248999999999999999999999999999999999999999999999998 2    3


Q ss_pred             CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC-CCCCCCCCCcc
Q 009612          374 KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW-EDPHVFKPERF  452 (531)
Q Consensus       374 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~  452 (531)
                      .++++++++|||++|||+|+||++|+++... +|.+.+|++++ ||.|||||.|.++.+++||||++| |||++|+||||
T Consensus       341 ~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~-~R~~~~d~~l~-g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRw  418 (502)
T PLN02966        341 FVTEDDVKNLPYFRALVKETLRIEPVIPLLI-PRACIQDTKIA-GYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERF  418 (502)
T ss_pred             cCCHhhccCCcHHHHHHHHHhccCCCccccc-CcccCCCeeEc-cEEECCCCEEEEecccccCCcccccCChhhCChhhh
Confidence            5799999999999999999999999999743 79999999999 999999999999999999999999 99999999999


Q ss_pred             ccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC---CCccccccccccccCceeEEEee
Q 009612          453 LEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP---ADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       453 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      ++++.+....+..|+|||.|+|+|+|++||++|+++++|.|+++|+|++.++.+   ++.++..+++..+++++.+..++
T Consensus       419 l~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
T PLN02966        419 LEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEK  498 (502)
T ss_pred             cCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEe
Confidence            975433223456799999999999999999999999999999999999887642   33445567766444566555443


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.4e-75  Score=591.80  Aligned_cols=457  Identities=28%  Similarity=0.514  Sum_probs=357.8

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~  143 (531)
                      .+.||||+++|++|+++.+.....+..+.+|+++|  |++|++++| ++++|+|+||+.+++|+.+  ..|.+++.....
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~y--G~v~~i~~g-~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~  105 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKY--GDVFLLRMG-QRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVF  105 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHh--CCeEEEEcC-CeeEEEeCCHHHHHHHHHhCCccccCCCCcchH
Confidence            67899999999999998886444678999999999  899999999 8999999999999999973  456666533222


Q ss_pred             hhhhcc--cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhc-CCCccchHHHHHHHHHHHH
Q 009612          144 ECLMFS--RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQK-HNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       144 ~~~~~g--~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~~vi  220 (531)
                       ....|  .+.++..+|+.|+++||.+..++|++++++.+.+.++++++++++++.+... .++.+|+.+.++.+++|++
T Consensus       106 -~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        106 -DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             -hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence             22323  3445667899999999999668999999999999999999999999976532 2456899999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcc--cccccchhhhhhhcChhhHHHHHHhHhHHHHH-HHHHHHHHHHh
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGA--FNWSDYLPWMSLFYDPFRIHERCLKLVPRVKN-FVRGIIEEHRR  297 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~  297 (531)
                      +.++||.+++..+ +.....+.............  ..+..++|++.+.  .....+..........+ +.+..++++++
T Consensus       185 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        185 YRMMFDRRFESED-DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHhCCCccccc-chhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999997644 22333333333333222211  1223445554432  11222222222222233 33445666554


Q ss_pred             hhccC--CCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---c
Q 009612          298 LKNST--KLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---N  372 (531)
Q Consensus       298 ~~~~~--~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~  372 (531)
                      ..+..  +.+...|+++.++++.+++.++++++..++..+++||+|||+++++|++++|++||++|+|||+||+++   +
T Consensus       262 ~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~  341 (503)
T PLN02394        262 LMSAKGMDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG  341 (503)
T ss_pred             HhhhccCCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence            32211  112357899999988776679999999999999999999999999999999999999999999999998   3


Q ss_pred             CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcc
Q 009612          373 SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERF  452 (531)
Q Consensus       373 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  452 (531)
                      +.++++++++||||+|||+||||++|+++... +|.+.+|++++ ||.|||||.|.++.+++||||++|+||++|+||||
T Consensus       342 ~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~-~r~~~~d~~i~-g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRw  419 (503)
T PLN02394        342 NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLV-PHMNLEDAKLG-GYDIPAESKILVNAWWLANNPELWKNPEEFRPERF  419 (503)
T ss_pred             CCCCHhHHhhCHHHHHHHHHHHhcCCCccccc-ceecCCCcccC-CEEeCCCCEEEEchHHHhCCcccCCCccccCcccc
Confidence            56899999999999999999999999999864 78999999998 99999999999999999999999999999999999


Q ss_pred             ccCCcC--CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC-CCcccccc-ccccccCceeEEEe
Q 009612          453 LEADVD--VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP-ADLSEVLK-LSCEMKNPLRAVAV  528 (531)
Q Consensus       453 l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~-~~~~~~~~~~v~~~  528 (531)
                      ++++..  .......++|||.|+|+|+|++||++|+++++|.|+++|++++.++.+ .+..+..+ +.+..++++.|++.
T Consensus       420 l~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (503)
T PLN02394        420 LEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFK  499 (503)
T ss_pred             CCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEee
Confidence            975421  122345799999999999999999999999999999999999887753 45555554 56646689999999


Q ss_pred             eCC
Q 009612          529 DRN  531 (531)
Q Consensus       529 ~r~  531 (531)
                      ||+
T Consensus       500 ~r~  502 (503)
T PLN02394        500 PRS  502 (503)
T ss_pred             cCC
Confidence            995


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=4.5e-75  Score=588.18  Aligned_cols=456  Identities=29%  Similarity=0.473  Sum_probs=360.6

Q ss_pred             CCCCCCCCCCcccccccccCC--CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcch
Q 009612           66 SVAIPGPKGVPLFGSLFTLSR--GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQ  141 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~--~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~  141 (531)
                      .+.||||+++|++||++.+..  ..++..+.+|+++|  |++|++++| +.++|+++||+++++++.+  ..|+.++...
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARY--GPVVSLRVG-SRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHh--CCeEEEEcC-CccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            467999999999999976642  35788899999999  899999999 8999999999999999973  6677776543


Q ss_pred             hhhhhhccccee-cCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          142 SAECLMFSRAIG-FAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       142 ~~~~~~~g~~~~-~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      .......+.+++ +..+|+.|+++||.+.+++|++++++.+.+.+.++++.+++++.+....++.+|+.+.+..++.+++
T Consensus       111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            221111122333 3368999999998655899999999999999999999999999865444557899999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhh-cccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELL-GAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      +.++||.+++..    ....+........... .......++|.+.+.. ..+..++..+..+.+.+++.++++++++..
T Consensus       191 ~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (519)
T PLN00168        191 VLMCFGERLDEP----AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLIDARREYK  265 (519)
T ss_pred             HHHHcCCCcChh----hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987532    1223333333322211 1222334556443221 122234566778889999999998877643


Q ss_pred             cc----CC-C----CCCccHHHHHHhhhc----CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHH
Q 009612          300 NS----TK-L----GDNADFVDVLLSLEG----EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHA  366 (531)
Q Consensus       300 ~~----~~-~----~~~~d~~~~ll~~~~----~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~  366 (531)
                      ..    +. .    ....|+++.+++...    +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~  345 (519)
T PLN00168        266 NHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHD  345 (519)
T ss_pred             hhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            11    10 0    014689999997642    13599999999999999999999999999999999999999999999


Q ss_pred             HHHhh-c---CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCC
Q 009612          367 ELQAV-N---SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWE  442 (531)
Q Consensus       367 Ei~~~-~---~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~  442 (531)
                      ||+++ +   +.++++++++||||+|||+||+|++|+++... +|.+.+|++++ ||.||||+.|+++.+++||||++|+
T Consensus       346 Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~R~~~~d~~~~-g~~IpkGt~v~~~~~~~~~d~~~~~  423 (519)
T PLN00168        346 EIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVL-PHKAAEDMEVG-GYLIPKGATVNFMVAEMGRDEREWE  423 (519)
T ss_pred             HHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccC-CccCCCCccCC-CEEECCCCEEEEChHHHhcCccccC
Confidence            99998 2   45899999999999999999999999998754 79999999998 9999999999999999999999999


Q ss_pred             CCCCCCCCccccCCcC-----CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccc
Q 009612          443 DPHVFKPERFLEADVD-----VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSC  517 (531)
Q Consensus       443 dp~~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  517 (531)
                      ||++|+||||++.+..     ....+..|+|||.|+|+|+|++||++|++++++.|+++|+|++.++.+.+.....+++.
T Consensus       424 ~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  503 (519)
T PLN00168        424 RPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTT  503 (519)
T ss_pred             CccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEE
Confidence            9999999999974211     11234579999999999999999999999999999999999998764444433345677


Q ss_pred             cccCceeEEEeeCC
Q 009612          518 EMKNPLRAVAVDRN  531 (531)
Q Consensus       518 ~~~~~~~v~~~~r~  531 (531)
                      .+++++.|++++|+
T Consensus       504 ~~~~~~~~~~~~R~  517 (519)
T PLN00168        504 VMAKPLRARLVPRR  517 (519)
T ss_pred             eecCCcEEEEEecc
Confidence            78899999999996


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=8.6e-76  Score=594.66  Aligned_cols=445  Identities=22%  Similarity=0.330  Sum_probs=357.3

Q ss_pred             CCCCCCCCCCcccccccccCC------------------CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHH
Q 009612           66 SVAIPGPKGVPLFGSLFTLSR------------------GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKE  127 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~------------------~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~  127 (531)
                      .+.||||+++|++||++.+..                  .+....+.+|+++|  |++|++++| +.++|+++||+++++
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~dp~~v~~  117 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQY--GKRFIYWNG-TEPRLCLTETELIKE  117 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHh--CCeEEEccC-CccEEEECCHHHHHH
Confidence            568999999999999987641                  12334578899999  899999999 999999999999999


Q ss_pred             hhcC-CCCCCCCcchh-hhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCC-C
Q 009612          128 ILTS-PHFADRPIKQS-AECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHN-G  204 (531)
Q Consensus       128 vl~~-~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~  204 (531)
                      |+.+ ..+..++.... ......|.++++ .+|+.|+++||.+ .+.|++.+++.+.+.+.++++.+++.+.+....+ +
T Consensus       118 il~~~~~~~~r~~~~~~~~~~~~g~~l~~-~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        118 LLTKYNTVTGKSWLQQQGTKHFIGRGLLM-ANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             HHhcCCCCCCCcchhhhHHHHHhcCCccc-cCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9985 34555553321 112234667755 4899999999999 7889999999999999999999999998654333 5


Q ss_pred             ccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHH
Q 009612          205 FVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRV  284 (531)
Q Consensus       205 ~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~  284 (531)
                      ++|+.+++..+++|+++.++||.+++..+   ..   .+.+...............+|++.++  +.+..++++...+.+
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~p~~~~~--p~~~~~~~~~~~~~~  267 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKGK---QI---FHLLTVLQRLCAQATRHLCFPGSRFF--PSKYNREIKSLKGEV  267 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccch---HH---HHHHHHHHHHHHHhhhhhcCchhhhC--CChhHHHHHHHHHHH
Confidence            79999999999999999999999875322   22   22222222211111111234554444  334445666777889


Q ss_pred             HHHHHHHHHHHHhhhccCC-CCCCccHHHHHHhhhcC-----CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCH
Q 009612          285 KNFVRGIIEEHRRLKNSTK-LGDNADFVDVLLSLEGE-----EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQ  358 (531)
Q Consensus       285 ~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~-----~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P  358 (531)
                      .+++.+.|+++++..+.+. .....|+++.+++..++     ..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       268 ~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P  347 (516)
T PLN02290        268 ERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNP  347 (516)
T ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCH
Confidence            9999999988876543221 12357999999975431     24789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhh--cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhc
Q 009612          359 KVQAKLHAELQAV--NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITH  436 (531)
Q Consensus       359 ~~~~~l~~Ei~~~--~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~  436 (531)
                      ++|+|+|+|++++  +..++++++++||||+|||+||||++|+++.+  +|.+++|++++ ||.||||+.|+++.+++||
T Consensus       348 ~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~--~R~~~~d~~i~-g~~IP~Gt~V~~~~~~~~r  424 (516)
T PLN02290        348 TWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPATLL--PRMAFEDIKLG-DLHIPKGLSIWIPVLAIHH  424 (516)
T ss_pred             HHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCcccc--ceeecCCeeEC-CEEECCCCEEEecHHHhcC
Confidence            9999999999998  44689999999999999999999999999976  99999999999 9999999999999999999


Q ss_pred             CCCCC-CCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccc
Q 009612          437 DSQVW-EDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKL  515 (531)
Q Consensus       437 d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  515 (531)
                      ||++| +||++|+||||++++.   .....|+|||.|+|+|+|++||++|+++++++|+++|+++++++.+  .....++
T Consensus       425 dp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--~~~~~~~  499 (516)
T PLN02290        425 SEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--HAPVVVL  499 (516)
T ss_pred             ChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--cCcccee
Confidence            99999 8999999999995321   1234699999999999999999999999999999999999876532  2223358


Q ss_pred             cccccCceeEEEeeCC
Q 009612          516 SCEMKNPLRAVAVDRN  531 (531)
Q Consensus       516 ~~~~~~~~~v~~~~r~  531 (531)
                      +++|.+++.|++++|+
T Consensus       500 ~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        500 TIKPKYGVQVCLKPLN  515 (516)
T ss_pred             eecCCCCCeEEEEeCC
Confidence            8899999999999996


No 14 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-75  Score=545.25  Aligned_cols=457  Identities=23%  Similarity=0.361  Sum_probs=390.2

Q ss_pred             CCCCCCCCCCCCCCCCcccccccccC---CCchhHHHHHHHHhcCCCceEEEE-cCCCccEEEecCHHHHHHhhcC-CCC
Q 009612           60 GRNQRGSVAIPGPKGVPLFGSLFTLS---RGLAHRTLAAMAWSRGNTQLMAFS-LGGSTPVVVASDPHTAKEILTS-PHF  134 (531)
Q Consensus        60 ~~~~~~~~~~PgP~~~p~iG~~~~~~---~~~~~~~~~~~~~ky~~g~i~~~~-lg~~~~~vvv~dp~~i~~vl~~-~~~  134 (531)
                      .+..++...+|||+++|++|.++.+.   ..+.|+....++++|  |+||+.. +| +...|.+.||+.++.+|++ ..+
T Consensus        43 ~~~~r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~Y--G~I~~~~~~G-~~~~V~v~~p~d~E~v~r~EG~~  119 (519)
T KOG0159|consen   43 PRRARPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKY--GPIFREGMLG-RVDLVHVYNPDDVEKVFRNEGKY  119 (519)
T ss_pred             ccccCChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHc--CceeeeccCC-CCCeEEeeCHHHHHHHHhcCCCC
Confidence            34456678999999999999988433   247899999999999  9999999 77 9999999999999999996 567


Q ss_pred             CCCC-cchhh--hhhhcc--cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhc---CCCcc
Q 009612          135 ADRP-IKQSA--ECLMFS--RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQK---HNGFV  206 (531)
Q Consensus       135 ~~~~-~~~~~--~~~~~g--~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~v  206 (531)
                      +.|| ..+..  +.-.++  .|+ +..+|++|++.|..+++.++++++++.|.+.+++.+++++..++...+   +..+.
T Consensus       120 P~Rp~~~~~w~~~rd~~~~~~Gl-~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~  198 (519)
T KOG0159|consen  120 PFRPLLIEPWVAYRDFRGGVCGL-FLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVP  198 (519)
T ss_pred             CCcccccchhhhhHHhhccCCCc-ccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccch
Confidence            8886 22222  222333  566 455999999999999989999999999999999999999999988765   33467


Q ss_pred             chHHHHHHHHHHHHHHHHhccccccCCC--chhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHH
Q 009612          207 SLRKHLQLAALNNIMGSVFGVRYDIDRD--SKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRV  284 (531)
Q Consensus       207 dl~~~~~~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~  284 (531)
                      |+.+.+.+++++.||.++||.++++...  +++...+++++..++.....+...  .++++++  +.+.++++.++.+.+
T Consensus       199 D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~--~t~~wk~~~~~~D~i  274 (519)
T KOG0159|consen  199 DFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYF--PTKVWKDFVRAWDQI  274 (519)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhC--CChHHHHHHHHHHHH
Confidence            9999999999999999999999998874  467888999999998865543322  2567777  788899999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHH
Q 009612          285 KNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKL  364 (531)
Q Consensus       285 ~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l  364 (531)
                      .++..+.|++..++.+..... ....-+.+.+....+.++.+++..+++.+++||.|||++++.|+||+|++||++|++|
T Consensus       275 ~~~~~~~Id~~l~~l~~~~~~-~~~~~~~l~~~L~~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L  353 (519)
T KOG0159|consen  275 FDVGDKYIDNALEELEKQDSA-GSEYTGSLLELLLRKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRL  353 (519)
T ss_pred             HHHHHHHHHHHHHHHHhcccc-ccchhHHHHHHHHHccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHH
Confidence            999999999988877654221 1233333444333445899999999999999999999999999999999999999999


Q ss_pred             HHHHHhh----cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCC
Q 009612          365 HAELQAV----NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQV  440 (531)
Q Consensus       365 ~~Ei~~~----~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~  440 (531)
                      ++|+.++    +..++.+++.++|||+|||+||+|++|++++.  .|+..+|++++ ||.|||||.|.++++.+.+||++
T Consensus       354 ~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~--~R~l~~D~vL~-gY~vPagT~V~l~~~~~~r~~~~  430 (519)
T KOG0159|consen  354 REEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN--GRVLPKDLVLS-GYHVPAGTLVVLFLYVLGRNPAY  430 (519)
T ss_pred             HHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc--ccccchhceec-cceecCCCeEEEeehhhccChhh
Confidence            9999999    35689999999999999999999999999999  89999999999 99999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCcccccccccccc
Q 009612          441 WEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMK  520 (531)
Q Consensus       441 ~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  520 (531)
                      |++|++|+|||||+++. ...++..++|||.|+|+|+||++|++|+-++||+|+++|+++..++.+  ++....+++.|.
T Consensus       431 F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p--v~~~~~~il~P~  507 (519)
T KOG0159|consen  431 FPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP--VEYVYRFILVPN  507 (519)
T ss_pred             CCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC--ccceeEEEEcCC
Confidence            99999999999998773 234778899999999999999999999999999999999999988534  445667888899


Q ss_pred             CceeEEEeeCC
Q 009612          521 NPLRAVAVDRN  531 (531)
Q Consensus       521 ~~~~v~~~~r~  531 (531)
                      .++.++|++|+
T Consensus       508 ~~l~f~f~~r~  518 (519)
T KOG0159|consen  508 RPLRFKFRPRN  518 (519)
T ss_pred             CCcceeeeeCC
Confidence            99999999985


No 15 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.1e-75  Score=581.21  Aligned_cols=451  Identities=26%  Similarity=0.398  Sum_probs=368.5

Q ss_pred             CCCCCCCCCCCcccccccccCCC--chhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhc--CCCCCCCCcc
Q 009612           65 GSVAIPGPKGVPLFGSLFTLSRG--LAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILT--SPHFADRPIK  140 (531)
Q Consensus        65 ~~~~~PgP~~~p~iG~~~~~~~~--~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~--~~~~~~~~~~  140 (531)
                      ....+|||+++|++|++..+...  ....++.++..+|  |++|+.++| +.++|+++||+.+++|+.  +..+.+.+.+
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~  109 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRY--GPIFKTWLG-GKPTVVTTDPELIEEILKSSNENYPKGPDY  109 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHc--Cchhhhhhc-CeeEEEEcCHHHHHHHHhcCcccCCCchhH
Confidence            35789999999999999998644  5777889999999  799999999 999999999999999996  3555666666


Q ss_pred             hhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          141 QSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       141 ~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      .......+|.|++++ +|+.|+++||.+ .+.|+...++.+...+.+....+...+.... .++.+|+.+.+.++++|++
T Consensus       110 ~~~~~~~lG~gll~~-~g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i  186 (497)
T KOG0157|consen  110 PESLKPWLGDGLLFS-DGEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDII  186 (497)
T ss_pred             HHHHHHHhcCccccC-CchHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHH
Confidence            656666778888777 599999999999 8899999999999999999988888887643 2333999999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchh-hhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLP-WMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      +.++||......+ .+...++.+++.........   ....| +..++... +..++..++.+.++++++++|+++++..
T Consensus       187 ~~~~~G~~~~~~~-~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~  261 (497)
T KOG0157|consen  187 CKTAMGPESLDAE-GPELFEYVQAFDDLTELISK---RINLPLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREEL  261 (497)
T ss_pred             HHHhcCCcccccc-CCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999992221111 23445666666654443322   11233 33333212 2567888999999999999999999765


Q ss_pred             ccCCC---CCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-c-CC
Q 009612          300 NSTKL---GDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-N-SK  374 (531)
Q Consensus       300 ~~~~~---~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~-~~  374 (531)
                      ..+..   ....|+++.+....+ +.++++++.+++.+|++||+|||+++++|++++|+.||++|+|+++|++++ + ..
T Consensus       262 ~~~~~~~~~~~~d~L~~~~~~~~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~  340 (497)
T KOG0157|consen  262 EKEGSGEEKKRLDFLDTLLLEED-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRD  340 (497)
T ss_pred             HhcCCcccchhhhHHHHHHHhcc-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCC
Confidence            43221   246788886333223 679999999999999999999999999999999999999999999999998 2 33


Q ss_pred             CChhccC--CChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCC-CCCCCCCCc
Q 009612          375 ITDADVA--RLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWE-DPHVFKPER  451 (531)
Q Consensus       375 ~~~~~~~--~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~-dp~~F~P~R  451 (531)
                      ..+++..  +|+|+++||+||||++|++|..  .|.+.+|+++++||.||||+.|.++++++|||+++|+ ||++|||||
T Consensus       341 ~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~--~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeR  418 (497)
T KOG0157|consen  341 DKWEVEKLDQMKYLEMVIKESLRLYPPVPLV--ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPER  418 (497)
T ss_pred             CCCChhhhhhhHHHHHHHHHHhccCCCCchh--hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccc
Confidence            3233333  5999999999999999999998  8999999999758999999999999999999999995 999999999


Q ss_pred             cccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          452 FLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       452 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      |+++......++++|+|||+|+|.|+|++||++|+++++++|+++|+|++..+..  ..+...++++|.++++|++++|.
T Consensus       419 f~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  419 FLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             cCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCC
Confidence            9975433334578999999999999999999999999999999999999987643  55677899999999999999985


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.7e-73  Score=571.87  Aligned_cols=463  Identities=22%  Similarity=0.377  Sum_probs=350.5

Q ss_pred             CCCCCCCCCCCCCCcccccccccCCCch-hHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCC
Q 009612           62 NQRGSVAIPGPKGVPLFGSLFTLSRGLA-HRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRP  138 (531)
Q Consensus        62 ~~~~~~~~PgP~~~p~iG~~~~~~~~~~-~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~  138 (531)
                      +.++...||||+++|++||++.+...++ ...+.++.++|+ |+||++++| ++++|+|+||+.+++++.+  ..|++++
T Consensus        35 ~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~-g~i~~~~lg-~~~~vvvsdpe~ikevl~~~~~~f~~rp  112 (534)
T PLN03018         35 KDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELK-TDIACFNFA-GTHTITINSDEIAREAFRERDADLADRP  112 (534)
T ss_pred             CCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhC-CCeEEEEeC-CccEEEECCHHHHHHHHHhCcHhhcCCC
Confidence            3344568999999999999998753223 234556666664 799999999 9999999999999999974  5588877


Q ss_pred             cchhhhhhhcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHH
Q 009612          139 IKQSAECLMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAAL  217 (531)
Q Consensus       139 ~~~~~~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  217 (531)
                      ..........+ .++++..+|+.|+++||.+...+++......+.+..+.+++++++.+.+....++++|+.+.+.++++
T Consensus       113 ~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  192 (534)
T PLN03018        113 QLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGY  192 (534)
T ss_pred             CchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHH
Confidence            55433322212 34666667999999999995444555555555667777899999999865444567999999999999


Q ss_pred             HHHHHHHhccccccCCC-----chhHHHHHHHHHHHHH---hhcccccccchh-hhhhhcChhhHHHHHHhHhHHHHHHH
Q 009612          218 NNIMGSVFGVRYDIDRD-----SKSLQELTEMVREGFE---LLGAFNWSDYLP-WMSLFYDPFRIHERCLKLVPRVKNFV  288 (531)
Q Consensus       218 ~vi~~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~  288 (531)
                      |+++.++||.+++..+.     ......+...+.....   ........+.+| +++++. ..+..++.......+.+++
T Consensus       193 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~  271 (534)
T PLN03018        193 AVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYN  271 (534)
T ss_pred             HHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHH
Confidence            99999999999864321     1111112212222222   111112223344 443221 1122344555567788888


Q ss_pred             HHHHHHHHhhhcc-CCCCCCccHHHHHHhhhcCC---CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHH
Q 009612          289 RGIIEEHRRLKNS-TKLGDNADFVDVLLSLEGEE---KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKL  364 (531)
Q Consensus       289 ~~~i~~~~~~~~~-~~~~~~~d~~~~ll~~~~~~---~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l  364 (531)
                      +++++++++.... +......|+++.++++.+++   .++++++++++.++++||+|||+++++|++++|+.||++|+|+
T Consensus       272 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        272 NPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            9999887754321 11113469999999865433   3899999999999999999999999999999999999999999


Q ss_pred             HHHHHhh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC
Q 009612          365 HAELQAV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW  441 (531)
Q Consensus       365 ~~Ei~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~  441 (531)
                      ++||+++   ++.++.+++++|||++|||+||||++|+++... +|.+.+|++++ ||.||||+.|+++.+++|+||++|
T Consensus       352 ~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~-~r~~~~d~~i~-G~~IpkGt~V~~~~~~~~~dp~~~  429 (534)
T PLN03018        352 LKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVP-PHVARQDTTLG-GYFIPKGSHIHVCRPGLGRNPKIW  429 (534)
T ss_pred             HHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccC-CcccCCCeeEC-CEEECCCCEEEEChHHhcCCcccC
Confidence            9999998   456899999999999999999999999999863 68999999999 999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCcCC-----CCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC-CCCccccccc
Q 009612          442 EDPHVFKPERFLEADVDV-----RGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS-PADLSEVLKL  515 (531)
Q Consensus       442 ~dp~~F~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~  515 (531)
                      +||++|+||||++++...     ...+..++|||.|+|.|+|++||.+|+++++|+|+++|++++.++. +++..+..+.
T Consensus       430 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  509 (534)
T PLN03018        430 KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDAS  509 (534)
T ss_pred             CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccc
Confidence            999999999999754221     1234579999999999999999999999999999999999987653 3333333354


Q ss_pred             cccccCceeEEEeeC
Q 009612          516 SCEMKNPLRAVAVDR  530 (531)
Q Consensus       516 ~~~~~~~~~v~~~~r  530 (531)
                      +.. ++++.|+++||
T Consensus       510 ~~~-p~~~~v~~~~R  523 (534)
T PLN03018        510 LLM-AKPLLLSVEPR  523 (534)
T ss_pred             eec-CCCeEEEEEec
Confidence            554 58999999998


No 17 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.6e-74  Score=572.36  Aligned_cols=449  Identities=24%  Similarity=0.447  Sum_probs=363.4

Q ss_pred             CCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhhhhh
Q 009612           69 IPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSAECL  146 (531)
Q Consensus        69 ~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~~~~  146 (531)
                      ||||+++|++||++++...+++..+.+|+++|  |++|++++| ++++|+|+||+++++|+.+  ..|++++....... 
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~-   76 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIY--GPIYTIRTG-ASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTV-   76 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHh--CCeEEEEEC-CEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHH-
Confidence            68999999999999887556899999999999  899999999 9999999999999999974  56777664433322 


Q ss_pred             hcc-c-ceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhc--CCCccchHHHHHHHHHHHHHH
Q 009612          147 MFS-R-AIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQK--HNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       147 ~~g-~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      +.| . .+.+..+|+.|+++||.+.+++|+...++.+.+.+++.++.+++.+.+...  .++++|+.+.+..+++|+++.
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~  156 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLI  156 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHH
Confidence            333 2 344445699999999988788899888889999999999999998875533  457899999999999999999


Q ss_pred             HHhccccccCCCchh------HHHHHHHHHHHHHhhcccccccchhhhhhhcChhh-HHHHHHhHhHHHHHHHHHHHHHH
Q 009612          223 SVFGVRYDIDRDSKS------LQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFR-IHERCLKLVPRVKNFVRGIIEEH  295 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~i~~~  295 (531)
                      ++||.+++..+..+.      ...+...+...+.......+.+++|.++++  +.. ..+...+....+.++++++++++
T Consensus       157 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~  234 (466)
T PLN02655        157 QALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWI--PNKSFETRVQTTEFRRTAVMKALIKQQ  234 (466)
T ss_pred             HHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhc--CchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998875431111      122333344444443333344567776665  222 22333334445667888888877


Q ss_pred             HhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--cC
Q 009612          296 RRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--NS  373 (531)
Q Consensus       296 ~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--~~  373 (531)
                      +++...+  ++..|+++.+++..  +.++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++  +.
T Consensus       235 ~~~~~~~--~~~~d~l~~ll~~~--~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~  310 (466)
T PLN02655        235 KKRIARG--EERDCYLDFLLSEA--THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDE  310 (466)
T ss_pred             HHhhcCC--CCcccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence            7654333  23568999999864  358999999999999999999999999999999999999999999999998  44


Q ss_pred             CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccc
Q 009612          374 KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFL  453 (531)
Q Consensus       374 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  453 (531)
                      .++++++++|||++|||+||||++|+++... +|.+.+|++++ ||.||||+.|+++.+++||||++|+||++|+||||+
T Consensus       311 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~-~r~~~~d~~~~-g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~  388 (466)
T PLN02655        311 RVTEEDLPNLPYLNAVFHETLRKYSPVPLLP-PRFVHEDTTLG-GYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFL  388 (466)
T ss_pred             CCCHHHHhcChHHHHHHHHHhccCCCcCCCC-CcccCCCcccC-CEEECCCCEEEecHHHhcCCcccCCChhccCccccC
Confidence            4899999999999999999999999998863 69999999999 999999999999999999999999999999999999


Q ss_pred             cCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          454 EADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       454 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +++... .....++|||.|+|.|+|++||..|+++++++||++|++++.++.. ...+..++++.+++++.|++++|.
T Consensus       389 ~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        389 GEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             CCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecC
Confidence            754321 1235799999999999999999999999999999999999976643 223456788889999999999984


No 18 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.6e-73  Score=569.18  Aligned_cols=446  Identities=19%  Similarity=0.273  Sum_probs=345.0

Q ss_pred             CCCCCCCCCCcccccccccCCC--chhHHHHHHHHhcCCCceEE---EEcCCCccEEEecCHHHHHHhhcC--CCCCCCC
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRG--LAHRTLAAMAWSRGNTQLMA---FSLGGSTPVVVASDPHTAKEILTS--PHFADRP  138 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~--~~~~~~~~~~~ky~~g~i~~---~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~  138 (531)
                      .+.+|||+++|++||+..+...  ..++++.+...+|  |..++   .++| +.++|+|+||+.+++|+.+  ..|.+++
T Consensus        30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~g-~~~~vvv~dpe~i~~il~~~~~~~~k~~  106 (500)
T PLN02169         30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEAS--NLTFYFKGPWLS-GTDMLFTADPKNIHHILSSNFGNYPKGP  106 (500)
T ss_pred             cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhC--CCcEEEEeeccC-CCCeEEEcCHHHHHHHHhhCcccCCCcH
Confidence            4578999999999999776522  2334444444456  55544   5778 8999999999999999985  4566654


Q ss_pred             cchhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhccc--ccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 009612          139 IKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSH--EPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAA  216 (531)
Q Consensus       139 ~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  216 (531)
                      ...... ...|+|++++ +|+.|+++||.+ ++.|+..+++.+  .+.+.+.++.+++.+++....++++|+.+.+.+++
T Consensus       107 ~~~~~~-~~~g~gl~~~-~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t  183 (500)
T PLN02169        107 EFKKIF-DVLGEGILTV-DFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFM  183 (500)
T ss_pred             HHHHHH-HhhcCccccc-CcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHH
Confidence            332222 2357888665 899999999999 799998877542  36677788889998876655667899999999999


Q ss_pred             HHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhh-----hhcChhhHHHHHHhHhHHHHHHHHHH
Q 009612          217 LNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMS-----LFYDPFRIHERCLKLVPRVKNFVRGI  291 (531)
Q Consensus       217 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~l~~~~~~~~~~~~~~~~~~~~~~~~  291 (531)
                      +|+|+.++||.+.+..+.......+.+++........   ...+.|++.     ++  +.+..++..++.+.+.+++.++
T Consensus       184 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  258 (500)
T PLN02169        184 FDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWI--GIGLERKMRTALATVNRMFAKI  258 (500)
T ss_pred             HHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHh--CCchhhHHHHHHHHHHHHHHHH
Confidence            9999999999987654311111233333333222111   111223221     11  2344567788889999999999


Q ss_pred             HHHHHhhhccC-C-CCCCccHHHHHHhhhcC-----CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHH
Q 009612          292 IEEHRRLKNST-K-LGDNADFVDVLLSLEGE-----EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKL  364 (531)
Q Consensus       292 i~~~~~~~~~~-~-~~~~~d~~~~ll~~~~~-----~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l  364 (531)
                      |+++++..... . .+...|+++.+++..++     ..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       259 I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl  338 (500)
T PLN02169        259 ISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKI  338 (500)
T ss_pred             HHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHH
Confidence            99887642211 0 01246899999986432     14789999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceee-cCCeeeCCCCEEEechhhhhcCCCCC-C
Q 009612          365 HAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQL-SNGMLIPANTTAMVNMWAITHDSQVW-E  442 (531)
Q Consensus       365 ~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i-~~g~~ip~g~~v~~~~~~~~~d~~~~-~  442 (531)
                      ++||+++   ++.+++++||||+|||+||||++|++|..  .|.+.+|.++ + ||.||||+.|+++.+++||||++| +
T Consensus       339 ~~Ei~~v---~~~~dl~~L~Yl~avi~EtLRl~P~vp~~--~r~~~~d~~~~~-G~~IpkGt~v~i~~~~ihrd~~~w~~  412 (500)
T PLN02169        339 RHEINTK---FDNEDLEKLVYLHAALSESMRLYPPLPFN--HKAPAKPDVLPS-GHKVDAESKIVICIYALGRMRSVWGE  412 (500)
T ss_pred             HHHHHhh---CCHHHHhcCHHHHHHHHHHHhcCCCCCcC--ceecCCCCCccC-CEEECCCCEEEEcHHHhhCCccccCC
Confidence            9999975   57899999999999999999999999998  7887777665 6 999999999999999999999999 8


Q ss_pred             CCCCCCCCccccCCcCCC-CCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccC
Q 009612          443 DPHVFKPERFLEADVDVR-GGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKN  521 (531)
Q Consensus       443 dp~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  521 (531)
                      ||++|+||||++++.... .++..|+|||+|+|+|+|++||++|+++++|+|+++|+++++++.++  ....+++++|++
T Consensus       413 dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~  490 (500)
T PLN02169        413 DALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKH  490 (500)
T ss_pred             ChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCC
Confidence            999999999997543321 23567999999999999999999999999999999999999765433  334567889999


Q ss_pred             ceeEEEeeC
Q 009612          522 PLRAVAVDR  530 (531)
Q Consensus       522 ~~~v~~~~r  530 (531)
                      ++.|++++|
T Consensus       491 gl~l~l~~~  499 (500)
T PLN02169        491 GLKVTVTKK  499 (500)
T ss_pred             CEEEEEEeC
Confidence            999999998


No 19 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.3e-73  Score=573.76  Aligned_cols=455  Identities=19%  Similarity=0.290  Sum_probs=346.6

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcC-CCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRG-NTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQS  142 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~-~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~  142 (531)
                      .+.+|||+++|++||++.+.. . +..+.+|.++|. +|++|++++| ++++|+++||+++++|+.+  ..|.+++....
T Consensus        29 ~~~~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g-~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  105 (516)
T PLN03195         29 QRNRKGPKSWPIIGAALEQLK-N-YDRMHDWLVEYLSKDRTVVVKMP-FTTYTYIADPVNVEHVLKTNFANYPKGEVYHS  105 (516)
T ss_pred             ccccCCCCCCCeecchHHHHh-c-cchHHHHHHHHhccCCcEEEeeC-CCCceEecCHHHHHHHHhhCccccCCcHhHHH
Confidence            346899999999999876542 2 344566666662 2689999999 8999999999999999974  45555433322


Q ss_pred             hhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccch-HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHH
Q 009612          143 AECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGR-QLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       143 ~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  221 (531)
                      ......|.+++ +.+|+.|+++||.+ ++.|+..+++.+.+.+ .+.++.+++.+.+....++++|+.+++..+++|+++
T Consensus       106 ~~~~~~g~~l~-~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        106 YMEVLLGDGIF-NVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHHHhcCeee-ccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence            22234567765 45899999999999 7889999999998875 666777888776543356789999999999999999


Q ss_pred             HHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhcc
Q 009612          222 GSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNS  301 (531)
Q Consensus       222 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (531)
                      .++||.+++..+++.....+.+.++........ .....++.+..+. +....+.+.+....+.+++.+.++++++....
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        184 KVGFGVEIGTLSPSLPENPFAQAFDTANIIVTL-RFIDPLWKLKKFL-NIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HHHhCCCccccccCCCccHHHHHHHHHHHHHHH-HHhcchhhHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999987654211112344444333221100 0000111111110 11223445566777888888888887655322


Q ss_pred             CC---CCCCccHHHHHHhhhcC--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--c--
Q 009612          302 TK---LGDNADFVDVLLSLEGE--EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--N--  372 (531)
Q Consensus       302 ~~---~~~~~d~~~~ll~~~~~--~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--~--  372 (531)
                      ++   .....|+++.++++.++  +.++++++++++.++++||+|||+++++|++|+|++||++|+|||+|++++  +  
T Consensus       262 ~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  341 (516)
T PLN03195        262 ARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERA  341 (516)
T ss_pred             cccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccc
Confidence            10   01356899999976543  359999999999999999999999999999999999999999999999986  1  


Q ss_pred             -------------------CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhh
Q 009612          373 -------------------SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWA  433 (531)
Q Consensus       373 -------------------~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~  433 (531)
                                         +.++++++++||||+|||+||||++|+++..  .|.+.+|.++.+||.||||+.|.++.++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~--~r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        342 KEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD--PKGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             ccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch--hhhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               3478999999999999999999999999998  7878787776339999999999999999


Q ss_pred             hhcCCCCC-CCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCcccc
Q 009612          434 ITHDSQVW-EDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEV  512 (531)
Q Consensus       434 ~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  512 (531)
                      +||||++| +||++|+||||++++......+..|+|||.|+|+|+|++||++|+++++|.|+++|++++.++.+..  ..
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~~  497 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVK--YR  497 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcce--ee
Confidence            99999999 9999999999996432112244579999999999999999999999999999999999987654333  23


Q ss_pred             ccccccccCceeEEEeeCC
Q 009612          513 LKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       513 ~~~~~~~~~~~~v~~~~r~  531 (531)
                      ...++.|++++.|++++|+
T Consensus       498 ~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        498 MMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeEEecCCCEEEEEEeCC
Confidence            3456778899999999985


No 20 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2e-72  Score=565.82  Aligned_cols=432  Identities=17%  Similarity=0.245  Sum_probs=335.3

Q ss_pred             CCCCCCCCCCCCcccccccccCC----CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCC
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLSR----GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADR  137 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~~----~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~  137 (531)
                      ++.+.||||+++|++||++.+..    +.++..+.+++++|  |++|++++| ++++|+++||+++++|+.+  ..|..+
T Consensus        35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~~g-~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRY--GKIYRSNLF-GEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHh--ccccccccc-CCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            44578999999999999865431    35677889999999  899999999 9999999999999999985  334333


Q ss_pred             CcchhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcc-cccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 009612          138 PIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILS-HEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAA  216 (531)
Q Consensus       138 ~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  216 (531)
                      .... ....+.+.++++. +|+.|+++|+.+ .+.|++.+++. +.+.+.+.+..+++.+.    .++.+|+.+.+.+++
T Consensus       112 ~~~~-~~~~~g~~~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~  184 (490)
T PLN02500        112 YPRS-IGGILGKWSMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKFT  184 (490)
T ss_pred             CchH-HHHHhCccccccc-CCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHHH
Confidence            2211 1222222355444 899999999999 68899988876 45666677777766653    345799999999999


Q ss_pred             HHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHH
Q 009612          217 LNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHR  296 (531)
Q Consensus       217 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  296 (531)
                      +|++++++||.+.+..    ...++.+.+..........  ...+|.        ...++..++.+.+.+++.+.+++++
T Consensus       185 ~~vi~~~~fg~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~~~  250 (490)
T PLN02500        185 FNLMAKHIMSMDPGEE----ETEQLKKEYVTFMKGVVSA--PLNFPG--------TAYRKALKSRATILKFIERKMEERI  250 (490)
T ss_pred             HHHHHHHHhCCCCCch----HHHHHHHHHHHHHhhhhcc--hhcCCC--------cccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999875422    2233333333332211110  011221        1123455667888899999998877


Q ss_pred             hhhccCC-CCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh----
Q 009612          297 RLKNSTK-LGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV----  371 (531)
Q Consensus       297 ~~~~~~~-~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~----  371 (531)
                      +..+.+. .....|+++.+++.   ..++++++++++.++++||+|||+++++|++++|++||++|+|+|+|++++    
T Consensus       251 ~~~~~~~~~~~~~d~l~~ll~~---~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~  327 (490)
T PLN02500        251 EKLKEEDESVEEDDLLGWVLKH---SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAK  327 (490)
T ss_pred             HhhhcccCCCCcchHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcc
Confidence            6433221 11356899999874   358999999999999999999999999999999999999999999999986    


Q ss_pred             ----cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCC
Q 009612          372 ----NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVF  447 (531)
Q Consensus       372 ----~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F  447 (531)
                          ++.++++|+++|||++|||+||||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|
T Consensus       328 ~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~--~R~~~~d~~~~-G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F  404 (490)
T PLN02500        328 KQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL--HRKALKDVRYK-GYDIPSGWKVLPVIAAVHLDSSLYDQPQLF  404 (490)
T ss_pred             ccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe--eeEeCCCceeC-CEEECCCCEEEechhhcccCcccCCCcccc
Confidence                12579999999999999999999999999987  89999999999 999999999999999999999999999999


Q ss_pred             CCCccccCCcCCC------CCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccC
Q 009612          448 KPERFLEADVDVR------GGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKN  521 (531)
Q Consensus       448 ~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  521 (531)
                      +||||++++....      ..+..|+|||.|+|.|+|++||++|+++++|+|+++|+|++.++.....   ...+ .+++
T Consensus       405 ~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~---~~~~-~~~~  480 (490)
T PLN02500        405 NPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA---FPFV-DFPK  480 (490)
T ss_pred             ChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee---cccc-cCCC
Confidence            9999997542211      1345799999999999999999999999999999999999877543211   1223 3458


Q ss_pred             ceeEEEee
Q 009612          522 PLRAVAVD  529 (531)
Q Consensus       522 ~~~v~~~~  529 (531)
                      +++|++++
T Consensus       481 ~l~~~~~~  488 (490)
T PLN02500        481 GLPIRVRR  488 (490)
T ss_pred             CceEEEEe
Confidence            99999876


No 21 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.2e-71  Score=565.62  Aligned_cols=451  Identities=18%  Similarity=0.281  Sum_probs=350.7

Q ss_pred             CCCCCCCCCCc----------------ccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhh
Q 009612           66 SVAIPGPKGVP----------------LFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEIL  129 (531)
Q Consensus        66 ~~~~PgP~~~p----------------~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl  129 (531)
                      ...+|||+.-.                ..||+..+..++++..+.+||++|  |+||++++| ++++|+|+||+.+++||
T Consensus       114 ~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kY--GpI~ri~lG-p~~~vvIsDpe~i~eIl  190 (633)
T PLN02738        114 KLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTY--GGIFRLTFG-PKSFLIVSDPSIAKHIL  190 (633)
T ss_pred             hCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHh--CCEEEEEeC-CCCEEEECCHHHHHHHH
Confidence            57899999611                345555666678999999999999  899999999 89999999999999999


Q ss_pred             cC--CCCCCCCcchhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccc
Q 009612          130 TS--PHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVS  207 (531)
Q Consensus       130 ~~--~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd  207 (531)
                      .+  ..|.+++... ......|.++++ .+|+.|+++|+.+ .++|+...++.+++.+.++++.+++++.+....++++|
T Consensus       191 ~~~~~~f~k~~~~~-~~~~~~g~~l~~-~dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vd  267 (633)
T PLN02738        191 RDNSKAYSKGILAE-ILEFVMGKGLIP-ADGEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVE  267 (633)
T ss_pred             hhCcccCCCcchHH-HHhhccCCceec-CCcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence            84  4466553322 222234566654 5899999999999 78999999999999999999999999987665678999


Q ss_pred             hHHHHHHHHHHHHHHHHhccccccCCCchh-HHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHH
Q 009612          208 LRKHLQLAALNNIMGSVFGVRYDIDRDSKS-LQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKN  286 (531)
Q Consensus       208 l~~~~~~~~~~vi~~~~fG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~  286 (531)
                      +.+.+..+++|+|+.++||.+++...+++. ...+.+.+...............+|.+..+  + +..++..+..+.+.+
T Consensus       268 l~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~-~~~~~~~~~~~~l~~  344 (633)
T PLN02738        268 MESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--S-PRQRKVAEALKLIND  344 (633)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--c-hHHHHHHHHHHHHHH
Confidence            999999999999999999999875442221 122222222221110000011112332222  1 122344455556666


Q ss_pred             HHHHHHHHHHhhhccC--------CCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCH
Q 009612          287 FVRGIIEEHRRLKNST--------KLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQ  358 (531)
Q Consensus       287 ~~~~~i~~~~~~~~~~--------~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P  358 (531)
                      +.+++++.+++..+..        ......|+++.+++..  +.++++++.+++..+++||+|||+.+|+|++++|++||
T Consensus       345 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~--~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~P  422 (633)
T PLN02738        345 TLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG--DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEP  422 (633)
T ss_pred             HHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC--CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCH
Confidence            6666665443321100        0113468999998753  35899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhh--cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhc
Q 009612          359 KVQAKLHAELQAV--NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITH  436 (531)
Q Consensus       359 ~~~~~l~~Ei~~~--~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~  436 (531)
                      ++|+|||+|++++  ++.++++++++||||+|||+|+||++|+++..  +|++.+|++++ ||.|||||.|.++.+.+||
T Consensus       423 evq~kLreEl~~v~~~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~--~R~a~~d~~i~-gy~IPkGT~V~~s~~~ihr  499 (633)
T PLN02738        423 SVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVL--IRRSLENDMLG-GYPIKRGEDIFISVWNLHR  499 (633)
T ss_pred             HHHHHHHHHHHHhcCCCCCCHHHHccCHHHHHHHHHHHhcCCCcccc--ceeeccCceEC-CEEECCCCEEEecHHHHhC
Confidence            9999999999998  56689999999999999999999999999987  89999999998 9999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccccCCc--CCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCcccccc
Q 009612          437 DSQVWEDPHVFKPERFLEADV--DVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLK  514 (531)
Q Consensus       437 d~~~~~dp~~F~P~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  514 (531)
                      ||++||||++|+||||++++.  .......+++|||.|+|.|+|++||++|+++++|+|+++|+|++.++.+ ++....+
T Consensus       500 dp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~  578 (633)
T PLN02738        500 SPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTG  578 (633)
T ss_pred             CccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-Ccccccc
Confidence            999999999999999985321  1122456799999999999999999999999999999999999987542 2333345


Q ss_pred             ccccccCceeEEEeeCC
Q 009612          515 LSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       515 ~~~~~~~~~~v~~~~r~  531 (531)
                      .++.+++++.|++++|.
T Consensus       579 ~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        579 ATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             eEEeeCCCcEEEEEECC
Confidence            78888899999999984


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7.3e-73  Score=571.10  Aligned_cols=445  Identities=32%  Similarity=0.544  Sum_probs=369.5

Q ss_pred             CCCCCCCcccccccccCC-CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCC--CCCCCCcchhhhh
Q 009612           69 IPGPKGVPLFGSLFTLSR-GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSP--HFADRPIKQSAEC  145 (531)
Q Consensus        69 ~PgP~~~p~iG~~~~~~~-~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~--~~~~~~~~~~~~~  145 (531)
                      ||||+++|++||++.+.. ++++..+.+++++|  |+||+++++ ++++|+|+||+.+++|+.+.  .+..++.......
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~ky--G~i~~~~~~-~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~   77 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKY--GPIFRIWPG-GQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEI   77 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHH--TSEEEEEET-TEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHh--CCEEEEeEe-cccccccccchhhcccccccccccccccccccccc
Confidence            799999999999999874 57899999999999  899999999 99999999999999999963  3444433333332


Q ss_pred             ---hhcccceecCCCChhHHHHHHHHhhccCChh-hhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHH
Q 009612          146 ---LMFSRAIGFAPNGTYWRLLRRIASSHLFSPR-RILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       146 ---~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  221 (531)
                         ...+.++++. +|+.|+++|+.+ .+.|+.. .+ .+.+.+++.++.+++.+......++.+|+.++++.+++|+++
T Consensus        78 ~~~~~~~~~l~~~-~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~  154 (463)
T PF00067_consen   78 FRGPFGGKGLFFS-DGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIG  154 (463)
T ss_dssp             HHHHHTTTSSTTS-SHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHH
T ss_pred             ccccccccccccc-cccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeecccccccccccc
Confidence               3445676544 779999999999 5667766 66 899999999999999999887655689999999999999999


Q ss_pred             HHHhccccccCCCchhHHHHHHHHHHHHHhhcc--cccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          222 GSVFGVRYDIDRDSKSLQELTEMVREGFELLGA--FNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       222 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      .++||.++++.+ ++...++.+.+......+..  ..+...+|++.++  +....+...++.+.+.+++.+.++++++..
T Consensus       155 ~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (463)
T PF00067_consen  155 RVLFGKDFGSLD-DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL--PTPLFRRFKRARDRLRKYIKEIIEERREEL  231 (463)
T ss_dssp             HHHHSSHHHGTT-HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             cccccceeeecc-ccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccc
Confidence            999999988555 23345666666666654422  1234456766666  666777888888999999999999998876


Q ss_pred             ccCCCCCCccHHHHHHhhh--cCC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---c
Q 009612          300 NSTKLGDNADFVDVLLSLE--GEE--KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---N  372 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~--~~~--~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~  372 (531)
                      ..+ .....|+++.+++..  .++  +++++++.+++..+++||+|||+.+++|++++|++||++|+++++||+++   +
T Consensus       232 ~~~-~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  310 (463)
T PF00067_consen  232 DDG-DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG  310 (463)
T ss_dssp             HSS-SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS
T ss_pred             ccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            654 136789999999986  222  69999999999999999999999999999999999999999999999998   3


Q ss_pred             CCCChhccCCChhHHHHHHHHhhCCCCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCc
Q 009612          373 SKITDADVARLPYLQAVVKEALRVHPPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPER  451 (531)
Q Consensus       373 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R  451 (531)
                      +.++.+++++||||+|||+||+|++|+++ .+  +|++.+|++++ ||.||||+.|+++.+++|+||++|+||++|+|||
T Consensus       311 ~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~--~R~~~~d~~l~-g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R  387 (463)
T PF00067_consen  311 REITFEDLSKLPYLDAVIKETLRLYPPVPFSL--PRVATEDVTLG-GYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPER  387 (463)
T ss_dssp             SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEE--EEEESSSEEET-TEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTG
T ss_pred             cccccccccccccccccccccccccccccccc--ccccccccccc-cccccccccccccccccccccccccccccccccc
Confidence            46889999999999999999999999999 54  89999999999 9999999999999999999999999999999999


Q ss_pred             cccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccc-cccccccCceeEEE
Q 009612          452 FLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVL-KLSCEMKNPLRAVA  527 (531)
Q Consensus       452 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~  527 (531)
                      |++.+.........|+|||.|+|.|+|++||++|+++++|+||++|+++++++.+....... +++. |+.++.|+|
T Consensus       388 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  463 (463)
T PF00067_consen  388 FLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLL-PPKPLKVKF  463 (463)
T ss_dssp             GBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSE-EESSSEEEE
T ss_pred             ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEe-eCCCcEEeC
Confidence            99876522235678999999999999999999999999999999999999876444333332 3444 568888875


No 23 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=4.7e-71  Score=551.35  Aligned_cols=422  Identities=22%  Similarity=0.287  Sum_probs=336.1

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~  143 (531)
                      ...||||+++|++||++.+. .+...++.+++++|  |++|++++| ++++++++||+.+++++.+  ..|..+.. ...
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~-~~~~~~~~~~~~~y--G~i~~~~~g-~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~~  104 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFL-KQGPDFMKNQRLRY--GSFFKSHIL-GCPTIVSMDPELNRYILMNEGKGLVPGYP-QSM  104 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHH-HhhHHHHHHHHHHh--ccCccceec-CCCeEEEeCHHHHHHHHcCCCCeEEecCC-HHH
Confidence            35689999999999998876 46677899999999  899999999 8999999999999999984  33322222 222


Q ss_pred             hhhhcc-cceecCCCChhHHHHHHHHhhccCChhhhcc-cccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHH
Q 009612          144 ECLMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILS-HEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       144 ~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  221 (531)
                      .. .+| .+++ ..+|+.|+++|+.+ .++|++..++. +.+.+.+.++++++++.    .++++|+.+.+..+++++++
T Consensus       105 ~~-~lg~~~~~-~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774        105 LD-ILGTCNIA-AVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSAL  177 (463)
T ss_pred             HH-HhCccchh-hcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHH
Confidence            22 234 3454 45899999999999 67899988875 67888888888877764    23579999999999999999


Q ss_pred             HHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhcc
Q 009612          222 GSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNS  301 (531)
Q Consensus       222 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (531)
                      .++||.+.+.     ...++.+.+.....  ...    .+|.  ++  +....++..++.+.+.+++.+.++++++..  
T Consensus       178 ~~~~g~~~~~-----~~~~~~~~~~~~~~--~~~----~~~~--~l--p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--  240 (463)
T PLN02774        178 KQIAGTLSKP-----ISEEFKTEFFKLVL--GTL----SLPI--DL--PGTNYRSGVQARKNIVRMLRQLIQERRASG--  240 (463)
T ss_pred             HHHcCCCChH-----HHHHHHHHHHHHhc--ccc----cCCc--CC--CChhhhHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            9999976431     12223322222211  111    1111  11  222234566778888999999998876531  


Q ss_pred             CCCCCCccHHHHHHhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-c-----CC
Q 009612          302 TKLGDNADFVDVLLSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-N-----SK  374 (531)
Q Consensus       302 ~~~~~~~d~~~~ll~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~-----~~  374 (531)
                         ....|+++.+++...++ .++++|+.+++.++++||+|||+++++|++++|++||++|+|+|+|++++ +     +.
T Consensus       241 ---~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~  317 (463)
T PLN02774        241 ---ETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDP  317 (463)
T ss_pred             ---CCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCC
Confidence               24579999999754333 58999999999999999999999999999999999999999999999998 2     35


Q ss_pred             CChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcccc
Q 009612          375 ITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLE  454 (531)
Q Consensus       375 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  454 (531)
                      ++++++++|||++|||+|+||++|+++..  .|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||++
T Consensus       318 ~~~~~l~~lpyl~a~ikE~lRl~P~v~~~--~R~~~~d~~l~-g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~  394 (463)
T PLN02774        318 IDWNDYKSMRFTRAVIFETSRLATIVNGV--LRKTTQDMELN-GYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLD  394 (463)
T ss_pred             CCHHHHhcCcHHHHHHHHHHhcCCCCCCc--ccccCCCeeEC-CEEECCCCEEEEehHHhcCCcccCCChhccCchhcCC
Confidence            78999999999999999999999999977  89999999998 9999999999999999999999999999999999997


Q ss_pred             CCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          455 ADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       455 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      ++..   ....++|||+|+|.|+|++||.+|++++++.|+++|++++.++.++.  ..  .++.|+++++|+++|
T Consensus       395 ~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~--~~--~~~~p~~g~~~~~~~  462 (463)
T PLN02774        395 KSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM--KF--PRVEAPNGLHIRVSP  462 (463)
T ss_pred             CCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc--cC--CCCCCCCCceEEeee
Confidence            5421   12359999999999999999999999999999999999998764322  11  234478999999875


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4.9e-71  Score=550.67  Aligned_cols=424  Identities=22%  Similarity=0.313  Sum_probs=341.4

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchh
Q 009612           63 QRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQS  142 (531)
Q Consensus        63 ~~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~  142 (531)
                      .+....||||+++|++||++.+..++++.++.+++++|  |++++++++ ++++|+++||+++++|+.+..-..++....
T Consensus        31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~~-~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~  107 (463)
T PLN02196         31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRY--GSVFKTHVL-GCPCVMISSPEAAKFVLVTKSHLFKPTFPA  107 (463)
T ss_pred             CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHh--hhhheeeec-CCceEEEcCHHHHHHHHhCCCCcccccCch
Confidence            34467899999999999998765568899999999999  899999999 899999999999999998522112333332


Q ss_pred             hhhhhccc-ceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHH
Q 009612          143 AECLMFSR-AIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       143 ~~~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  221 (531)
                      ......|. +++ ..+|+.|+++||.+ .+.|++++++.+.+.+++.++++++++.     ++++|+.++++.+++++++
T Consensus       108 ~~~~~~g~~~l~-~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~  180 (463)
T PLN02196        108 SKERMLGKQAIF-FHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVAL  180 (463)
T ss_pred             HHHHHcCccccc-ccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHH
Confidence            33334453 554 45899999999999 6789999999999999999999988773     3578999999999999999


Q ss_pred             HHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhcc
Q 009612          222 GSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNS  301 (531)
Q Consensus       222 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (531)
                      .++||.+....     ...+.+.+.......      ..+|+.  +  +....++..++.+.+.+++.+.++++++..  
T Consensus       181 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~------~~~~~~--~--p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~--  243 (463)
T PLN02196        181 LSIFGKDEVLY-----REDLKRCYYILEKGY------NSMPIN--L--PGTLFHKSMKARKELAQILAKILSKRRQNG--  243 (463)
T ss_pred             HHHcCCCCchH-----HHHHHHHHHHHhcch------hccccc--C--CCccchHHHHHHHHHHHHHHHHHHHHhhcC--
Confidence            99999875311     112222221111100      112221  1  112224566777888888988888776531  


Q ss_pred             CCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh------cCCC
Q 009612          302 TKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV------NSKI  375 (531)
Q Consensus       302 ~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~------~~~~  375 (531)
                         .+..|+++.+++.  .++++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++      ++.+
T Consensus       244 ---~~~~d~l~~ll~~--~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~  318 (463)
T PLN02196        244 ---SSHNDLLGSFMGD--KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESL  318 (463)
T ss_pred             ---CCcccHHHHHHhc--CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCC
Confidence               2457899998863  3468999999999999999999999999999999999999999999999987      2458


Q ss_pred             ChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccC
Q 009612          376 TDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEA  455 (531)
Q Consensus       376 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  455 (531)
                      ++++++++||++|||+||||++|+++..  .|.+.+|++++ ||.||||+.|+++.+++|+||++|+||++|+||||++.
T Consensus       319 ~~~~~~~l~yl~avi~EtlRl~p~~~~~--~R~~~~d~~i~-g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~  395 (463)
T PLN02196        319 TWEDTKKMPLTSRVIQETLRVASILSFT--FREAVEDVEYE-GYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA  395 (463)
T ss_pred             CHHHHhcChHHHHHHHHHHhcCCCcccc--ceeeccccccC-CEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC
Confidence            8999999999999999999999999987  79999999998 99999999999999999999999999999999999963


Q ss_pred             CcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          456 DVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       456 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      .     .+..++|||.|+|.|+|+++|++|++++++.|+++|++++.++. .++  ....+..|++++.|+++.
T Consensus       396 ~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~--~~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        396 P-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGI--QYGPFALPQNGLPIALSR  461 (463)
T ss_pred             C-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cce--EEcccccCCCCceEEEec
Confidence            2     34579999999999999999999999999999999999987642 233  334456698999999875


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=4.9e-69  Score=543.89  Aligned_cols=436  Identities=21%  Similarity=0.302  Sum_probs=343.6

Q ss_pred             CCCCCCCCCCCCCcccccccccC----CCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCC
Q 009612           63 QRGSVAIPGPKGVPLFGSLFTLS----RGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADR  137 (531)
Q Consensus        63 ~~~~~~~PgP~~~p~iG~~~~~~----~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~  137 (531)
                      ++..+.||||+++|++||++.+.    .++++..+.+++++||..++|+++++ +.++|+++||+++++|+.+ +.|.++
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~-~~~~vvv~~pe~~~~vl~~~~~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMF-GQPTVLVTTPEACKRVLTDDDAFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecC-CCCeEEEcCHHHHHHHHcCCCccccC
Confidence            34457899999999999998764    24688899999999932237899999 8999999999999999985 445544


Q ss_pred             CcchhhhhhhcccceecCCCChhHHHHHHHHhhccC-ChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 009612          138 PIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLF-SPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAA  216 (531)
Q Consensus       138 ~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~f-s~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  216 (531)
                      ...... . .+|.+.+...+|+.|+++||.+ .+.| ++++++.+.+.+.++++++++++..    ++.+|+.+.+..++
T Consensus       117 ~~~~~~-~-~~g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~  189 (490)
T PLN02302        117 WPESTV-E-LIGRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKLT  189 (490)
T ss_pred             CchhHH-H-HhccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHHH
Confidence            332222 2 3454433445899999999999 5666 5788999999999999999998743    34699999999999


Q ss_pred             HHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHH
Q 009612          217 LNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHR  296 (531)
Q Consensus       217 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  296 (531)
                      +++++.++||.+++..     ...+.+.+...........  ..+|.        ...++..++.+.+.+++.+.+++++
T Consensus       190 ~~vi~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~p~--------~~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        190 FKIIMYIFLSSESELV-----MEALEREYTTLNYGVRAMA--INLPG--------FAYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHHcCCCChHH-----HHHHHHHHHHHHHHhhhCC--cCCCc--------hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999876421     2222222222111111100  01121        1123444566788888888888887


Q ss_pred             hhhccCCCCCCccHHHHHHhhhcCC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-cC
Q 009612          297 RLKNSTKLGDNADFVDVLLSLEGEE--KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-NS  373 (531)
Q Consensus       297 ~~~~~~~~~~~~d~~~~ll~~~~~~--~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~~  373 (531)
                      +..+.+...+..|+++.+++..+++  .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++ +.
T Consensus       255 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~  334 (490)
T PLN02302        255 NSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKK  334 (490)
T ss_pred             HhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence            6543222124679999999875432  58999999999999999999999999999999999999999999999987 21


Q ss_pred             ------CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCC
Q 009612          374 ------KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVF  447 (531)
Q Consensus       374 ------~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F  447 (531)
                            .++++++++||||+|||+|++|++|+++..  +|.+.+|++++ ||.||||+.|+++.+++||||++|+||++|
T Consensus       335 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~~~-g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F  411 (490)
T PLN02302        335 RPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV--FREAKTDVEVN-GYTIPKGWKVLAWFRQVHMDPEVYPNPKEF  411 (490)
T ss_pred             CCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc--hhcccCCEeEC-CEEECCCCEEEeeHHHhcCCcccCCCcccc
Confidence                  278999999999999999999999999987  89999999999 999999999999999999999999999999


Q ss_pred             CCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEE
Q 009612          448 KPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       448 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      +||||++++.    .+..++|||.|+|.|+|++||.+|+++++++|+++|++++.++. ..+.  ...+..|.+++.+++
T Consensus       412 ~PeR~~~~~~----~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~  484 (490)
T PLN02302        412 DPSRWDNYTP----KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCLARI  484 (490)
T ss_pred             ChhhcCCCCC----CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCceEEE
Confidence            9999996431    34579999999999999999999999999999999999988642 2222  223477889999999


Q ss_pred             eeCC
Q 009612          528 VDRN  531 (531)
Q Consensus       528 ~~r~  531 (531)
                      ++|.
T Consensus       485 ~~~~  488 (490)
T PLN02302        485 TKVA  488 (490)
T ss_pred             Eecc
Confidence            9884


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.7e-69  Score=538.94  Aligned_cols=429  Identities=22%  Similarity=0.308  Sum_probs=337.5

Q ss_pred             CCCCCCCCCCCCcccccccccCC----CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCC
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLSR----GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADR  137 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~~----~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~  137 (531)
                      ++.+.||||.++|++||++.+..    .+++.++.+++++|  |+||++++| ++++||++||++++++|.+  ..|..+
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~y--G~i~~~~lg-~~~~vvv~~p~~~~~vl~~~~~~~~~~   80 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLY--GKVFKSHIF-GTPTIVSTDAEVNKVVLQSDGNAFVPA   80 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHh--hheeeeccC-CCCEEEEeCHHHhhHHHhCCCCeeecc
Confidence            44567899999999999988742    36888999999999  899999999 9999999999999999985  334433


Q ss_pred             Ccchhhhhhhccc-ceecCCCChhHHHHHHHHhhccCChhhhccc-ccchHHHHHHHHHHHHHhhcCCCccchHHHHHHH
Q 009612          138 PIKQSAECLMFSR-AIGFAPNGTYWRLLRRIASSHLFSPRRILSH-EPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLA  215 (531)
Q Consensus       138 ~~~~~~~~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~-~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  215 (531)
                      .. ... ...+|. +++ ..+|+.|+++|+.+ .+.|+..++... .+.+.+.++.+++.+.    .++++|+.+.+..+
T Consensus        81 ~~-~~~-~~l~g~~~~~-~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  152 (452)
T PLN03141         81 YP-KSL-TELMGKSSIL-LINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKI  152 (452)
T ss_pred             Cc-hhH-HHHhCccccc-ccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHH
Confidence            21 112 223453 454 45899999999999 677877766543 3445555555544432    35679999999999


Q ss_pred             HHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHH
Q 009612          216 ALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEH  295 (531)
Q Consensus       216 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  295 (531)
                      ++++++.++||.+.+     +...++.+.+.........      +|.  .+  +.....+..++.+++.+++.+.|+++
T Consensus       153 ~~~vi~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~------~~~--~~--p~~~~~~~~~~~~~l~~~~~~~i~~~  217 (452)
T PLN03141        153 AFEVLVKALISLEPG-----EEMEFLKKEFQEFIKGLMS------LPI--KL--PGTRLYRSLQAKKRMVKLVKKIIEEK  217 (452)
T ss_pred             HHHHHHHHHcCCCch-----HHHHHHHHHHHHHhhhHHh------Ccc--CC--CchHhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999997653     1233343444333322111      121  01  11122345567888999999999888


Q ss_pred             HhhhccCCC---CCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-
Q 009612          296 RRLKNSTKL---GDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-  371 (531)
Q Consensus       296 ~~~~~~~~~---~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-  371 (531)
                      ++..+.+..   ....|+++.+++.. +..+++++++.++..+++||+|||+.+++|++++|+.||++|+++++|++++ 
T Consensus       218 ~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~  296 (452)
T PLN03141        218 RRAMKNKEEDETGIPKDVVDVLLRDG-SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLK  296 (452)
T ss_pred             HHHHhccCccccCChhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            765432210   12468999999864 3468999999999999999999999999999999999999999999999865 


Q ss_pred             ------cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCC
Q 009612          372 ------NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPH  445 (531)
Q Consensus       372 ------~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~  445 (531)
                            ++.++.+++.+|||++|||+|++|++|+++.+  +|.+.+|++++ ||.||||+.|+++.+++|+||++|+||+
T Consensus       297 ~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~--~R~~~~d~~l~-g~~IPkG~~V~~~~~~~~~d~~~~~dP~  373 (452)
T PLN03141        297 RLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV--MRKAMKDVEIK-GYLIPKGWCVLAYFRSVHLDEENYDNPY  373 (452)
T ss_pred             hccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc--ceeecCCeeEC-CEEECCCCEEEEehHhccCCchhcCCcc
Confidence                  34578999999999999999999999999876  89999999999 9999999999999999999999999999


Q ss_pred             CCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeE
Q 009612          446 VFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRA  525 (531)
Q Consensus       446 ~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v  525 (531)
                      +|+||||++++.    .+..|+|||+|+|.|+|++||.+|+++++|.|+++|++++.++...     ...++.|..++.|
T Consensus       374 ~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~  444 (452)
T PLN03141        374 QFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPI  444 (452)
T ss_pred             ccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCCceE
Confidence            999999997532    3457999999999999999999999999999999999998764221     1247789999999


Q ss_pred             EEeeCC
Q 009612          526 VAVDRN  531 (531)
Q Consensus       526 ~~~~r~  531 (531)
                      ++++|+
T Consensus       445 ~~~~~~  450 (452)
T PLN03141        445 WVTRID  450 (452)
T ss_pred             EEEeCC
Confidence            999985


No 27 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=5.6e-69  Score=537.89  Aligned_cols=438  Identities=17%  Similarity=0.218  Sum_probs=342.6

Q ss_pred             CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhhhhhhcccce
Q 009612           75 VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSAECLMFSRAI  152 (531)
Q Consensus        75 ~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~~~~~~g~~~  152 (531)
                      .++.|++.... .+.+.++..+.++++ +.+++++.. +.  ++++||+.+++|+..  ++|.+............|+|+
T Consensus        49 ~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~-~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi  123 (502)
T PLN02426         49 AYLTASWAKDF-DNLCDWYAHLLRRSP-TGTIHVHVL-GN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGI  123 (502)
T ss_pred             CCccHHHHHhc-ccHHHHHHHHHHhCC-CcEEEEecC-Cc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCce
Confidence            45778887755 456778877888885 367777766 43  899999999999984  567665443333223457787


Q ss_pred             ecCCCChhHHHHHHHHhhccCChhhhcccc--cchHHHHHHHHHHHHHhhc--CCCccchHHHHHHHHHHHHHHHHhccc
Q 009612          153 GFAPNGTYWRLLRRIASSHLFSPRRILSHE--PGRQLDCAVMLQNIANEQK--HNGFVSLRKHLQLAALNNIMGSVFGVR  228 (531)
Q Consensus       153 ~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~--~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~~  228 (531)
                      +. .+|+.|+++||.+ ++.|+..+++.+.  +.+++.++.+++.+.+..+  .++++|+.++++++++|+++.++||.+
T Consensus       124 ~~-~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        124 FN-VDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             ee-cCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence            54 5899999999999 7889998888764  6777888888888876542  246799999999999999999999999


Q ss_pred             cccCCCchhHHHHHHHHHHHHHhhcccccccchhhhh---hhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCC
Q 009612          229 YDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMS---LFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLG  305 (531)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~---~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  305 (531)
                      +++.+.+....++.++++........ .....+|++.   .+. +.+..+++.++.+.+.+++.++|+++++...    .
T Consensus       202 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~----~  275 (502)
T PLN02426        202 PGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLL-NIGSERKLKEAIKLVDELAAEVIRQRRKLGF----S  275 (502)
T ss_pred             CcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHHHHHHHhccc----C
Confidence            87665322234455555544332111 1111223221   111 2234466778888999999999998876421    2


Q ss_pred             CCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-c---CCCChhccC
Q 009612          306 DNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-N---SKITDADVA  381 (531)
Q Consensus       306 ~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~---~~~~~~~~~  381 (531)
                      ...|+++.+++..    .+++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++ +   ..+++++++
T Consensus       276 ~~~dll~~ll~~~----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~  351 (502)
T PLN02426        276 ASKDLLSRFMASI----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMK  351 (502)
T ss_pred             CcchHHHHHHhcC----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHh
Confidence            4579999999753    3788999999999999999999999999999999999999999999987 2   257999999


Q ss_pred             CChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC-CCCCCCCCCccccCCcCCC
Q 009612          382 RLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW-EDPHVFKPERFLEADVDVR  460 (531)
Q Consensus       382 ~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~  460 (531)
                      +||||+|||+||||++|+++..  .|.+.+|.++.+|+.||||+.|.++.+++||||++| +||++|+||||++++....
T Consensus       352 ~LpYl~avi~EtLRl~p~v~~~--~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~  429 (502)
T PLN02426        352 EMHYLHAALYESMRLFPPVQFD--SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVP  429 (502)
T ss_pred             cChHHHHHHHHHHhCCCCCCCc--ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCC
Confidence            9999999999999999999987  799999988844999999999999999999999999 9999999999997432112


Q ss_pred             CCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          461 GGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       461 ~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      ..+..++|||.|+|.|+|++||.+|++++++.|+++|++++.++.+.......+++++|++++.|++++|.
T Consensus       430 ~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        430 ENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            23457999999999999999999999999999999999998654222223344678899999999999984


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.2e-68  Score=529.40  Aligned_cols=434  Identities=19%  Similarity=0.271  Sum_probs=336.9

Q ss_pred             CCCCCCCCCCCCCCCcccccccccCC----CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCC
Q 009612           61 RNQRGSVAIPGPKGVPLFGSLFTLSR----GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHF  134 (531)
Q Consensus        61 ~~~~~~~~~PgP~~~p~iG~~~~~~~----~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~  134 (531)
                      .+..+...||||.++|++||++.+..    .+++.++.+++++|  |++|+++++ ++++|+|+||+.+++++.+  ..|
T Consensus        24 ~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~l~-~~~~vvv~~pe~~~~il~~~~~~f  100 (472)
T PLN02987         24 TRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARY--GSLFMTHLF-GEPTVFSADPETNRFILQNEGKLF  100 (472)
T ss_pred             hccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHh--chhhhhhhc-CCCeEEEeCHHHHHHHHhCCCceE
Confidence            33444568899999999999988641    35788899999999  899999999 8999999999999999985  345


Q ss_pred             CCCCcchhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 009612          135 ADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQL  214 (531)
Q Consensus       135 ~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  214 (531)
                      .++.. ......+.+++++++ +|+.|+++|+.+ .++++.+.++.+.   ..++.++++......  .+++|+.+.+.+
T Consensus       101 ~~~~~-~~~~~~lg~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~v~~~~~~~~  172 (472)
T PLN02987        101 ECSYP-GSISNLLGKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLIRFNLDSW--SSRVLLMEEAKK  172 (472)
T ss_pred             EecCc-HHHHHHhCccccccc-CcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHHHHHHHhh--ccceehHHHHHH
Confidence            44322 122222323567665 899999999998 5554544444332   223444433322211  246899999999


Q ss_pred             HHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHH
Q 009612          215 AALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEE  294 (531)
Q Consensus       215 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (531)
                      ++++++++++||.+.+..     ...+.+.+.......    ....+|++      .+..++..+..+++.+++.+.+++
T Consensus       173 ~t~~vi~~~~fg~~~~~~-----~~~~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~  237 (472)
T PLN02987        173 ITFELTVKQLMSFDPGEW-----TESLRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMK  237 (472)
T ss_pred             HHHHHHHHHHcCCCChHH-----HHHHHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999765321     122222222221111    11223432      223466778889999999999998


Q ss_pred             HHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-c-
Q 009612          295 HRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-N-  372 (531)
Q Consensus       295 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~-  372 (531)
                      +++....+. +...|+++.+++..  ++++++|+++++.++++||+|||+.+++|++++|++||++|+++++|++++ + 
T Consensus       238 r~~~~~~~~-~~~~d~l~~ll~~~--~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~  314 (472)
T PLN02987        238 RRKEEEEGA-EKKKDMLAALLASD--DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAM  314 (472)
T ss_pred             HHhhhhccC-cccccHHHHHHhcC--CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcc
Confidence            876543221 24579999999764  359999999999999999999999999999999999999999999999987 2 


Q ss_pred             ----CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCC
Q 009612          373 ----SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFK  448 (531)
Q Consensus       373 ----~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~  448 (531)
                          ..++++++++|||++||++||+|++|+++..  +|.+.+|++++ ||.||||+.|+++.+++|+||++|+||++|+
T Consensus       315 ~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~--~R~~~~d~~~~-G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~  391 (472)
T PLN02987        315 KSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI--FRRAMTDIEVK-GYTIPKGWKVFASFRAVHLDHEYFKDARTFN  391 (472)
T ss_pred             cCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc--cccCCCCeeEC-CEEECCCCEEEEehHHhhCCcccCCCccccC
Confidence                3578899999999999999999999999876  89999999998 9999999999999999999999999999999


Q ss_pred             CCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEe
Q 009612          449 PERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       449 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  528 (531)
                      ||||++++... .....++|||.|+|.|+|++||.+|++++++.|+++|++++.++.++.+    ..++.|.+++.++++
T Consensus       392 PeRfl~~~~~~-~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~~~~~~  466 (472)
T PLN02987        392 PWRWQSNSGTT-VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRYPINVK  466 (472)
T ss_pred             cccCCCCCCCC-CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee----cccccCCCCceEEEE
Confidence            99999754322 1345799999999999999999999999999999999999987543222    348889999999999


Q ss_pred             eCC
Q 009612          529 DRN  531 (531)
Q Consensus       529 ~r~  531 (531)
                      +|.
T Consensus       467 ~r~  469 (472)
T PLN02987        467 RRD  469 (472)
T ss_pred             ecc
Confidence            984


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.8e-68  Score=535.47  Aligned_cols=449  Identities=20%  Similarity=0.274  Sum_probs=352.8

Q ss_pred             CCCCCCCCCcccccccccC----CCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcc
Q 009612           67 VAIPGPKGVPLFGSLFTLS----RGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIK  140 (531)
Q Consensus        67 ~~~PgP~~~p~iG~~~~~~----~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~  140 (531)
                      +.--|-.|+|++|+.+.+.    .+..+..+.+|+++|  |++|++++| +.++|+++||+++++|+.+  ..|.+++..
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~~pe~~~~il~~~~~~f~~~~~~   88 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEY--GPVYRLAAG-PRNFVVVSDPAIAKHVLRNYGSKYAKGLVA   88 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHc--CCEEEEccC-CccEEEEcCHHHHHHHHHhccccccCcchh
Confidence            3446788999999998754    257899999999999  899999999 8999999999999999974  667665433


Q ss_pred             hhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhccccc-chHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH
Q 009612          141 QSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEP-GRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNN  219 (531)
Q Consensus       141 ~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  219 (531)
                      .. ....+|.++++ .+|+.|+++||.+ .+.|+..+++.+.+ .+.++++++++.+.+...+++++|+.++++.+++|+
T Consensus        89 ~~-~~~~~~~~i~~-~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dv  165 (489)
T PLN02936         89 EV-SEFLFGSGFAI-AEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDV  165 (489)
T ss_pred             hh-hHHHhcCcccc-CCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHH
Confidence            22 22235666654 5899999999999 78899888887754 788899999999987655667899999999999999


Q ss_pred             HHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhh--hcChhhHHHHHHhHhHHHHHHHHHHHHHHHh
Q 009612          220 IMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSL--FYDPFRIHERCLKLVPRVKNFVRGIIEEHRR  297 (531)
Q Consensus       220 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  297 (531)
                      ++.++||.+++..+.+   .++.+.+...+..... .....+|++..  +....+..++..++.+.+.+++.+.++++++
T Consensus       166 i~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~  241 (489)
T PLN02936        166 IGLSVFNYNFDSLTTD---SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKE  241 (489)
T ss_pred             HHHHHcCCCccccccC---cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999865421   2233333332222111 11123343211  0001123456677788888888888887665


Q ss_pred             hhccCC---------CCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 009612          298 LKNSTK---------LGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAEL  368 (531)
Q Consensus       298 ~~~~~~---------~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei  368 (531)
                      ..+..+         .+...|+++.+++..+  +++++++.+++.++++||+|||+++++|++|+|++||++|+++|+|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei  319 (489)
T PLN02936        242 IVEAEGEVIEGEEYVNDSDPSVLRFLLASRE--EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEEL  319 (489)
T ss_pred             HHhhcccccccccccccCchHHHHHHHhccc--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            422110         0134679999887543  48999999999999999999999999999999999999999999999


Q ss_pred             Hhh--cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCC
Q 009612          369 QAV--NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHV  446 (531)
Q Consensus       369 ~~~--~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~  446 (531)
                      +++  +..++++++++||||+|||+||||++|+++... +|.+.+|+.++ ||.||||+.|+++.+++||||++|+||++
T Consensus       320 ~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~r~~~~~~~~~-g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~  397 (489)
T PLN02936        320 DRVLQGRPPTYEDIKELKYLTRCINESMRLYPHPPVLI-RRAQVEDVLPG-GYKVNAGQDIMISVYNIHRSPEVWERAEE  397 (489)
T ss_pred             HHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCccccc-ceeccCccccC-CeEECCCCEEEecHHhccCChhhCCCccc
Confidence            998  456789999999999999999999999998873 55556777777 99999999999999999999999999999


Q ss_pred             CCCCccccCCcC--CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCcee
Q 009612          447 FKPERFLEADVD--VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLR  524 (531)
Q Consensus       447 F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (531)
                      |+||||++++..  ....+..++|||.|+|.|+|++||++|+++++++|+++|+++++++.+..  ...++++.|++++.
T Consensus       398 F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~~  475 (489)
T PLN02936        398 FVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV--MTTGATIHTTNGLY  475 (489)
T ss_pred             cCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc--eecceEEeeCCCeE
Confidence            999999964321  11224579999999999999999999999999999999999998764433  23356777889999


Q ss_pred             EEEeeCC
Q 009612          525 AVAVDRN  531 (531)
Q Consensus       525 v~~~~r~  531 (531)
                      |++++|.
T Consensus       476 v~~~~R~  482 (489)
T PLN02936        476 MTVSRRR  482 (489)
T ss_pred             EEEEeee
Confidence            9999983


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-65  Score=466.55  Aligned_cols=438  Identities=17%  Similarity=0.278  Sum_probs=359.7

Q ss_pred             CCCCCCCC-CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhh
Q 009612           67 VAIPGPKG-VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSA  143 (531)
Q Consensus        67 ~~~PgP~~-~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~  143 (531)
                      ..||--++ +|++|+...+. +++.+++++..+||  |+||++.++ |+.+.++.||+....++.+  .+++.+......
T Consensus        31 ~~PPli~gwiP~lG~a~~fg-k~P~eFl~~~~~K~--GdVFTv~l~-Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l  106 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFG-KDPLEFLRECRKKY--GDVFTVLLM-GKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKL  106 (486)
T ss_pred             CCCcccccCcchhhHHHHhc-cCHHHHHHHHHHhc--CCeEEEEEc-CcEEEEEeCchhhHHHHcCcccccCHHHHHHHh
Confidence            46666665 89999999998 89999999999999  899999999 9999999999999999986  355544444445


Q ss_pred             hhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHH-HHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          144 ECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQN-IANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       144 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      ....||+|+.....+....++.+.+ ...+...+++++.+.+.++.++.++. +.+   ++....+..+...+++.+.-.
T Consensus       107 ~~~vFg~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~  182 (486)
T KOG0684|consen  107 TTPVFGKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRL  182 (486)
T ss_pred             hhhhcCCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHH
Confidence            5567898888777888888888888 66688899999999999999888887 322   456667778888888888888


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      ++||......+  ++...+...++..+.     .+...+|.  ++  |....++..++.+++.+.+.+.+.++++..+  
T Consensus       183 ll~~e~r~~~d--~~~a~l~~dLd~~F~-----~~d~~FP~--~L--P~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s--  249 (486)
T KOG0684|consen  183 LLGGEVRDQLD--ADVAKLYHDLDQGFQ-----PFDFLFPY--NL--PIPLLRRRDRARKKISKIFSKIILDRRASIS--  249 (486)
T ss_pred             hhhhhhhhhhc--chHHHHHHHHhcccc-----chHhhccc--CC--CcchhhhHHHHHHHHHHHHHHHHHHHHhccc--
Confidence            88887766544  233344444443332     12223342  23  4445566668899999999999999887654  


Q ss_pred             CCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh----cCCCCh
Q 009612          303 KLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV----NSKITD  377 (531)
Q Consensus       303 ~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~----~~~~~~  377 (531)
                        ....|+++.+++..++ .+.+++|+++..+.+++||..|++.+.+|++++|++|||+++.+++|++++    ...++.
T Consensus       250 --~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~  327 (486)
T KOG0684|consen  250 --KWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY  327 (486)
T ss_pred             --cccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence              2467899999883332 368999999999999999999999999999999999999999999999999    334899


Q ss_pred             hccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCC----eeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccc
Q 009612          378 ADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNG----MLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFL  453 (531)
Q Consensus       378 ~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g----~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  453 (531)
                      +.++++|.|++||+|||||+||.+.+  .|.+.+|.++. +    |.||+|..|.++++.+|+||++|+||+.|+||||+
T Consensus       328 d~L~~lplL~~~IkEtLRL~~p~~~~--~R~v~~D~tv~-~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~  404 (486)
T KOG0684|consen  328 DQLKDLPLLDSCIKETLRLHPPAHSL--MRKVHEDLTVP-GSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFL  404 (486)
T ss_pred             HHHhcchHHHHHHHHHHhcCCchhhH--HHhhccceeec-cCCcceecCCCCEEEeccccccCCccccCChhhCChhhcc
Confidence            99999999999999999999999887  79999999998 5    99999999999999999999999999999999999


Q ss_pred             cCCcCC----CCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          454 EADVDV----RGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       454 ~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      +++++.    ..-++++||||+|+|.|||+.||.+|++.++..+|++||+++.++..++++ .+.+.+.|..++.++-+.
T Consensus       405 ~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d-~s~~v~~P~g~v~irYK~  483 (486)
T KOG0684|consen  405 KDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVD-YSRMVMQPEGDVRIRYKR  483 (486)
T ss_pred             CCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCC-HHHhhcCCCCCceEEEee
Confidence            876543    112456799999999999999999999999999999999999987323333 335688899999999998


Q ss_pred             CC
Q 009612          530 RN  531 (531)
Q Consensus       530 r~  531 (531)
                      |+
T Consensus       484 R~  485 (486)
T KOG0684|consen  484 RP  485 (486)
T ss_pred             cC
Confidence            85


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.7e-58  Score=454.78  Aligned_cols=405  Identities=18%  Similarity=0.226  Sum_probs=292.9

Q ss_pred             CCCCCCCCCCCCcccccccccCC----CchhHHHHHHHHhcCCCc-eEEEEcCCCccE-------EEecCHHHHHHhhcC
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLSR----GLAHRTLAAMAWSRGNTQ-LMAFSLGGSTPV-------VVASDPHTAKEILTS  131 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~~----~~~~~~~~~~~~ky~~g~-i~~~~lg~~~~~-------vvv~dp~~i~~vl~~  131 (531)
                      .+.+.|||+.|+|++|++..+..    .++..++.+.++||  |+ ||+++++ +.++       |+++||++++.||.+
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~ky--G~~vfk~~l~-g~p~~~~~~~~v~~~~~e~~~~v~~~   90 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKY--KSTVFRVNMP-PGPFIAPDPRVIALLDQKSFPVLFDV   90 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHh--CCceEEecCC-CCCCCCCCCCEEEEEcCCceeeeecc
Confidence            45678999999999999986542    35579999999999  88 9999998 7555       999999999999984


Q ss_pred             ----CC--CCCCCcchhhhhhhcccc---eecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcC
Q 009612          132 ----PH--FADRPIKQSAECLMFSRA---IGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKH  202 (531)
Q Consensus       132 ----~~--~~~~~~~~~~~~~~~g~~---~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~  202 (531)
                          ++  +..  .++.... ++|.+   .++..+|+.|+++||++ .+.|+ ..++.+.+.+.+.++.++++|......
T Consensus        91 ~~~~~~~~~~~--~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~  165 (480)
T PLN02648         91 SKVDKRDVFTG--TYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAK  165 (480)
T ss_pred             hhcccccccee--eeccCcc-ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence                21  222  2222333 45533   33566899999999999 78898 477889999999999999999654334


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchh-hhhhhcC---hhhHHHHHH
Q 009612          203 NGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLP-WMSLFYD---PFRIHERCL  278 (531)
Q Consensus       203 ~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~---~~~~~~~~~  278 (531)
                      ++++|+.+.++.+++|++++++||.+.+...   ....+...................+| ++.....   +.+. ....
T Consensus       166 ~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~---l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~-~~~~  241 (480)
T PLN02648        166 KGKAEFNDPLDQMAFNFLCKALTGKDPSETA---LGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPF-FLVK  241 (480)
T ss_pred             CCCccccchHHHHHHHHHHHHHcCCCcchhh---hccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCch-hhhh
Confidence            5579999999999999999999998665310   11111111111111000000000011 0000000   0000 0000


Q ss_pred             hHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHH-HHHhhcccHHHHHHHHHHHHhhC
Q 009612          279 KLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWE-MIFRGTDTTALLTEWIMAELVLN  357 (531)
Q Consensus       279 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~-~~~AG~~tta~~l~~~l~~L~~~  357 (531)
                      +..+++.+++++.                   ++.+++..++.+++++|+.++++. ..++|++|++++++|++|+|++|
T Consensus       242 ~~~~~~~~~~~~~-------------------~~~ll~~~~~~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~  302 (480)
T PLN02648        242 SDYDKLYDFFRAS-------------------ATEALDLAEKFGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRA  302 (480)
T ss_pred             ccHHHHHHHHHHH-------------------HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence            0111111111111                   123333333346999999999875 44667777888999999999999


Q ss_pred             HH-HHHHHHHHHHhh-c---CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeec---CCeeeCCCCEEEe
Q 009612          358 QK-VQAKLHAELQAV-N---SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLS---NGMLIPANTTAMV  429 (531)
Q Consensus       358 P~-~~~~l~~Ei~~~-~---~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~---~g~~ip~g~~v~~  429 (531)
                      |+ +|+++++|++++ .   ..++++++++|||+++||+|+||++|+++..  .|.+.+|++++   +||.||||+.|++
T Consensus       303 p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~--~r~a~~d~~l~~~~~g~~IpkG~~V~~  380 (480)
T PLN02648        303 GEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ--YGRAREDFVIESHDAAFEIKKGEMLFG  380 (480)
T ss_pred             CHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc--cceecCCEEEecCCceEEECCCCEEEE
Confidence            95 999999999998 2   4689999999999999999999999999988  78899999996   3799999999999


Q ss_pred             chhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccC---------CCCCCCCcchHHHHHHHHHHHHHHHhhce-e
Q 009612          430 NMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPF---------GAGRRVCPGKNLGLATVSLWVAQLVKVYI-W  499 (531)
Q Consensus       430 ~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~  499 (531)
                      +.+.+||||++|+||++|||+||++++...   ...+++|         |+|+|.|+|++||++|++++++.|+++|+ +
T Consensus       381 ~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~  457 (480)
T PLN02648        381 YQPLVTRDPKVFDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSF  457 (480)
T ss_pred             ChHHHhCCcccCCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEE
Confidence            999999999999999999999998643221   1234444         67789999999999999999999999998 9


Q ss_pred             eeCCC
Q 009612          500 VPDVA  504 (531)
Q Consensus       500 ~~~~~  504 (531)
                      ++.++
T Consensus       458 ~l~~~  462 (480)
T PLN02648        458 EIEVD  462 (480)
T ss_pred             eecCC
Confidence            98765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.7e-54  Score=420.46  Aligned_cols=379  Identities=26%  Similarity=0.368  Sum_probs=303.0

Q ss_pred             hHHHHHHHHhcCCCceEEEEcCCCc-cEEEecCHHHHHHhhcCCCCCCCCc-chhh---hhhhcccceecCCCChhHHHH
Q 009612           90 HRTLAAMAWSRGNTQLMAFSLGGST-PVVVASDPHTAKEILTSPHFADRPI-KQSA---ECLMFSRAIGFAPNGTYWRLL  164 (531)
Q Consensus        90 ~~~~~~~~~ky~~g~i~~~~lg~~~-~~vvv~dp~~i~~vl~~~~~~~~~~-~~~~---~~~~~g~~~~~~~~g~~w~~~  164 (531)
                      ......+.+.|  |.++..+..++. .++++++++.+++++++..+..... ....   ....+|.+.++..+|+.|+++
T Consensus        25 ~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          25 RFFLERAEDPY--GDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhHHHHhCCC--chhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHHH
Confidence            34445566677  677777766232 2799999999999999754322221 1111   223455553456699999999


Q ss_pred             HHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHHHHH
Q 009612          165 RRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEM  244 (531)
Q Consensus       165 Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~  244 (531)
                      ||.+ .+.|+++.++.+.+.+.+.++++++.+ ..  + +.+++.+....+++++|+ .+||.+.+.      .......
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~--~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~------~~~~~~~  170 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQ--G-GADLVLDFAAELTLRVIA-ELLGVPLED------RPQLLRW  170 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-cc--C-CchhHHHHhhhhhHHHHH-HHhCCCHHH------HHHHHHH
Confidence            9999 889999999999999999999999998 32  2 778899999999999999 999988652      2233333


Q ss_pred             HHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCCC--
Q 009612          245 VREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEK--  322 (531)
Q Consensus       245 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~--  322 (531)
                      .........        |...    +.....+..++...+.+++.++|++++.       +..+|+++.++.+.++++  
T Consensus       171 ~~~~~~~~~--------~~~~----~~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~~~~~~~  231 (411)
T COG2124         171 SDALLLRLD--------PDLG----PEEPWRRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAEDDGGGR  231 (411)
T ss_pred             HHHHHhccC--------cccC----CcccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHhhCCCCc
Confidence            332222100        1100    2223456778899999999999999983       378999999999887764  


Q ss_pred             CCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCC
Q 009612          323 LSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPL  402 (531)
Q Consensus       323 l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~  402 (531)
                      ++++|+.++++++++||+|||+++|+|++|.|++||+.++++++|.+.             ||++++++|+||++||++.
T Consensus       232 lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-------------~~~~~~v~E~LR~~ppv~~  298 (411)
T COG2124         232 LSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-------------PLLEAVVEETLRLYPPVPL  298 (411)
T ss_pred             CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-------------HHHHHHHHHHHHhCCchhc
Confidence            999999999999999999999999999999999999999999999774             8999999999999999999


Q ss_pred             CccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHH
Q 009612          403 LSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLG  482 (531)
Q Consensus       403 ~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a  482 (531)
                      .  .|.+++|++++ |+.||||+.|+++.+++||||++|+||++|||+||.          ..++|||+|+|.|+|.+||
T Consensus       299 ~--~R~~~~d~~ig-g~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA  365 (411)
T COG2124         299 A--RRVATEDVELG-GYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALA  365 (411)
T ss_pred             c--ceeccCCEeeC-CEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHH
Confidence            5  89999999999 999999999999999999999999999999999996          3699999999999999999


Q ss_pred             HHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          483 LATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       483 ~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      ++|++++++.++++|++....+ +...  ..+.+..+..+..+.++.|
T Consensus       366 ~~E~~~~l~~ll~r~~~~~~~~-~~~~--~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         366 RLELKVALAELLRRFPLLLLAE-PPPL--VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHhCchhhcCC-CCCc--cccccccCCCcceeeeecC
Confidence            9999999999999999988765 2222  2234455556666666554


No 33 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=74.16  E-value=2.4  Score=33.99  Aligned_cols=7  Identities=43%  Similarity=0.515  Sum_probs=2.7

Q ss_pred             CCCCCCC
Q 009612           65 GSVAIPG   71 (531)
Q Consensus        65 ~~~~~Pg   71 (531)
                      +...+.|
T Consensus        30 G~~P~~g   36 (130)
T PF12273_consen   30 GLQPIYG   36 (130)
T ss_pred             CCCCcCC
Confidence            3443333


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=60.23  E-value=6.6  Score=26.14  Aligned_cols=7  Identities=57%  Similarity=1.118  Sum_probs=5.6

Q ss_pred             CCCcccc
Q 009612          448 KPERFLE  454 (531)
Q Consensus       448 ~P~R~l~  454 (531)
                      ||||||+
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888886


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=53.18  E-value=17  Score=23.97  Aligned_cols=20  Identities=35%  Similarity=0.325  Sum_probs=16.8

Q ss_pred             HHHHHHHhhCHHHHHHHHHH
Q 009612          348 EWIMAELVLNQKVQAKLHAE  367 (531)
Q Consensus       348 ~~~l~~L~~~P~~~~~l~~E  367 (531)
                      .-.+.||.+||++.+++.+.
T Consensus         3 Q~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    3 QEIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHHChHHHHHHHcC
Confidence            34678999999999999873


No 36 
>PF15050 SCIMP:  SCIMP protein
Probab=48.71  E-value=55  Score=25.19  Aligned_cols=27  Identities=30%  Similarity=0.688  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCccccc
Q 009612           31 SLLSLFLALVLLYLLTWAFSTGGGVAWQN   59 (531)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   59 (531)
                      +++.+.+.+++.++..|..+  +|..|.-
T Consensus        17 I~vS~~lglIlyCvcR~~lR--qGkkwei   43 (133)
T PF15050_consen   17 ILVSVVLGLILYCVCRWQLR--QGKKWEI   43 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHH--cccccee
Confidence            34445555555565667776  5666653


No 37 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=35.74  E-value=34  Score=27.19  Aligned_cols=24  Identities=17%  Similarity=0.430  Sum_probs=17.1

Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhc
Q 009612          474 RVCPGKNLGLATVSLWVAQLVKVY  497 (531)
Q Consensus       474 r~C~G~~~a~~e~~~~l~~ll~~f  497 (531)
                      -.|.|+.||+.++-.++..++..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            469999999999999999999764


No 38 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=34.96  E-value=1.2e+02  Score=19.28  Aligned_cols=42  Identities=21%  Similarity=0.236  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 009612          327 DMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAEL  368 (531)
Q Consensus       327 ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei  368 (531)
                      ++..++..++-.|.|-.+-.++--+...--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666667777777777777777777999887777665


No 39 
>PF12270 Cyt_c_ox_IV:  Cytochrome c oxidase subunit IV;  InterPro: IPR021050  This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=33.78  E-value=71  Score=25.66  Aligned_cols=19  Identities=37%  Similarity=0.607  Sum_probs=15.6

Q ss_pred             Ccccccccccchhhhhcccc
Q 009612            2 ELGFIDREKSLWVFTLFGSL   21 (531)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~   21 (531)
                      |+|| =+-+|||.+.++.++
T Consensus        80 e~Gf-FsP~SwWPl~la~~~   98 (137)
T PF12270_consen   80 ELGF-FSPHSWWPLVLAAAA   98 (137)
T ss_pred             CcCc-CCCccHhHHHHHHHH
Confidence            6777 678899999888776


No 40 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=29.91  E-value=25  Score=22.72  Aligned_cols=11  Identities=45%  Similarity=0.996  Sum_probs=9.2

Q ss_pred             ccCCCCCCCCc
Q 009612          467 APFGAGRRVCP  477 (531)
Q Consensus       467 ~~Fg~G~r~C~  477 (531)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999984


No 41 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=29.71  E-value=2.2e+02  Score=20.70  Aligned_cols=47  Identities=17%  Similarity=0.183  Sum_probs=39.6

Q ss_pred             CHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q 009612          324 SDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQA  370 (531)
Q Consensus       324 ~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  370 (531)
                      ..+.........++-=++.++..+.-.+.+.++||+..+++.+.+..
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~   76 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIE   76 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            45555666677888889999999999999999999999999998764


No 42 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=26.10  E-value=1e+02  Score=22.35  Aligned_cols=6  Identities=33%  Similarity=0.611  Sum_probs=3.4

Q ss_pred             CCcccc
Q 009612           74 GVPLFG   79 (531)
Q Consensus        74 ~~p~iG   79 (531)
                      .-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            346666


No 43 
>PHA03049 IMV membrane protein; Provisional
Probab=25.19  E-value=2e+02  Score=19.61  Aligned_cols=16  Identities=6%  Similarity=0.141  Sum_probs=6.6

Q ss_pred             HHHHHHHHHHHHHHHH
Q 009612           32 LLSLFLALVLLYLLTW   47 (531)
Q Consensus        32 ~~~~~~~~~~~~~~~~   47 (531)
                      ++++++++.++++..|
T Consensus         8 ~iICVaIi~lIvYgiY   23 (68)
T PHA03049          8 VIICVVIIGLIVYGIY   23 (68)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3334444444444444


No 44 
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=24.75  E-value=96  Score=28.32  Aligned_cols=10  Identities=30%  Similarity=0.913  Sum_probs=4.6

Q ss_pred             HHHHHHHHhh
Q 009612           41 LLYLLTWAFS   50 (531)
Q Consensus        41 ~~~~~~~~~~   50 (531)
                      ++++-.|+++
T Consensus       275 liiLYiWlyr  284 (295)
T TIGR01478       275 LIILYIWLYR  284 (295)
T ss_pred             HHHHHHHHHH
Confidence            3333445555


No 45 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=24.71  E-value=62  Score=28.09  Aligned_cols=43  Identities=26%  Similarity=0.262  Sum_probs=31.7

Q ss_pred             ChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEe
Q 009612          383 LPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMV  429 (531)
Q Consensus       383 lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~  429 (531)
                      -..+.|||.|+.-.......   .=...+|+.++ |..||||+.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~v---rlRLle~i~i~-g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRV---RLRLLEDIQIG-GILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEE---EEEEcCceEEC-CEEeCCCCEEEE
Confidence            45678999999877654332   12456899998 999999998754


No 46 
>PHA03164 hypothetical protein; Provisional
Probab=24.62  E-value=1.1e+02  Score=21.27  Aligned_cols=10  Identities=20%  Similarity=0.269  Sum_probs=6.5

Q ss_pred             ccccccchhh
Q 009612            6 IDREKSLWVF   15 (531)
Q Consensus         6 ~~~~~~~~~~   15 (531)
                      +.+.|++|.-
T Consensus        44 srtawnlwnn   53 (88)
T PHA03164         44 SRTAWNLWNN   53 (88)
T ss_pred             CchhHHHHHh
Confidence            4566777765


No 47 
>PF11829 DUF3349:  Protein of unknown function (DUF3349);  InterPro: IPR021784  This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 99 to 124 amino acids in length. ; PDB: 2KVC_A 3OL3_B 3OL4_A 2LKY_A.
Probab=24.51  E-value=2.2e+02  Score=21.31  Aligned_cols=52  Identities=27%  Similarity=0.364  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcc
Q 009612          286 NFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTD  341 (531)
Q Consensus       286 ~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~  341 (531)
                      .++..++.=.+...-++  -...|++-.|-=...  .+|++|+...+..+.-.|..
T Consensus         3 ~~l~~iv~WLRaGYP~G--vP~~Dy~PLlALL~r--~Ltd~ev~~Va~~L~~~~~~   54 (96)
T PF11829_consen    3 SFLASIVDWLRAGYPEG--VPPTDYVPLLALLRR--RLTDDEVAEVAAELAARGDP   54 (96)
T ss_dssp             HHHHHHHHHHHHH-TT---B-HHHHHHHHHHHTT--TS-HHHHHHHHHHHHHHTSS
T ss_pred             hHHHHHHHHHHccCCCC--CCCCccHHHHHHhcc--cCCHHHHHHHHHHHHhcCCC
Confidence            34444444444444444  255666555432222  38999998888888776654


No 48 
>PF02459 Adeno_terminal:  Adenoviral DNA terminal protein;  InterPro: IPR003391 The genome of adenovirus contains a protein covalently bound to the 5' end of each strand of the linear DNA molecule []. Since adenovirus DNA replication is initiated at the termini of the DNA molecule it has been proposed that the terminal protein serves as the primer for initiation of replication. However, the priming function now appears to reside in the precursor form of the terminal protein (pTP) found on the 5' ends of nascent DNA strands replicated in vitro [, ] and as a component of DNA-protein complexes isolated from virions of the protease-deficient adenovirus serotype 2 (Ad2) mutant tsl. The pTP is encoded by the leftward-transcribed strand of the viral genome and comprises part of a transcription unit that also encodes the single-strand DNA binding protein [].; GO: 0003677 DNA binding, 0006260 DNA replication
Probab=24.29  E-value=4.6e+02  Score=26.65  Aligned_cols=89  Identities=16%  Similarity=0.158  Sum_probs=62.4

Q ss_pred             hHHHHHHHHHHHHHHHhhhccCCCC-----CCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHh
Q 009612          281 VPRVKNFVRGIIEEHRRLKNSTKLG-----DNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELV  355 (531)
Q Consensus       281 ~~~~~~~~~~~i~~~~~~~~~~~~~-----~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~  355 (531)
                      .+++...+.+.|+...+.......+     -..+|-..|.++.+.+.+++.-+..-++=|+++  |..|+||.+.-..|.
T Consensus       331 ~~EV~~tv~e~I~~LqeELT~~AR~~~fFnFa~~FY~~l~rl~~~~~ite~~lRRWv~YFFv~--EHIAsTL~YLh~~L~  408 (548)
T PF02459_consen  331 EEEVRRTVAEAIRLLQEELTVSARNHQFFNFAVDFYELLERLEDLGRITESFLRRWVMYFFVA--EHIASTLNYLHHRLR  408 (548)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence            3445555555555554444322110     134566667777777889999999999988887  669999999999999


Q ss_pred             hCHHHHHHHHHHHHhh
Q 009612          356 LNQKVQAKLHAELQAV  371 (531)
Q Consensus       356 ~~P~~~~~l~~Ei~~~  371 (531)
                      .|+...+.+.-+..++
T Consensus       409 ~n~~f~R~V~l~~~QV  424 (548)
T PF02459_consen  409 LNRPFRRYVELNLAQV  424 (548)
T ss_pred             hhHHHHHhhhhheeeE
Confidence            9999888877666665


No 49 
>PF11027 DUF2615:  Protein of unknown function (DUF2615);  InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=23.91  E-value=2.5e+02  Score=21.35  Aligned_cols=9  Identities=11%  Similarity=-0.189  Sum_probs=4.2

Q ss_pred             HHHHHHHhh
Q 009612           42 LYLLTWAFS   50 (531)
Q Consensus        42 ~~~~~~~~~   50 (531)
                      +++++++++
T Consensus        66 A~~ly~~RP   74 (103)
T PF11027_consen   66 AMALYLLRP   74 (103)
T ss_pred             HHHHHHcCc
Confidence            334445555


No 50 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=23.35  E-value=1.1e+02  Score=22.59  Aligned_cols=27  Identities=11%  Similarity=0.133  Sum_probs=21.3

Q ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHhh
Q 009612          345 LLTEWIMAELVLNQKVQAKLHAELQAV  371 (531)
Q Consensus       345 ~~l~~~l~~L~~~P~~~~~l~~Ei~~~  371 (531)
                      .++.|.+...-..||..+.+++||+++
T Consensus        54 ~~lgy~v~tFnDcpeA~~eL~~eI~eA   80 (91)
T PF08285_consen   54 FTLGYGVATFNDCPEAAKELQKEIKEA   80 (91)
T ss_pred             HHHHHhhhccCCCHHHHHHHHHHHHHH
Confidence            445566666666899999999999987


No 51 
>COG3096 MukB Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=23.11  E-value=9.4e+02  Score=25.71  Aligned_cols=94  Identities=20%  Similarity=0.155  Sum_probs=53.8

Q ss_pred             ceEEEEcCCCccEEEecCHHHHHHhhcC-CCCC-----CCCcchhhhhhhcc-----cceecCCCChhHHHHHHHHhhcc
Q 009612          104 QLMAFSLGGSTPVVVASDPHTAKEILTS-PHFA-----DRPIKQSAECLMFS-----RAIGFAPNGTYWRLLRRIASSHL  172 (531)
Q Consensus       104 ~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~-----~~~~~~~~~~~~~g-----~~~~~~~~g~~w~~~Rr~l~~~~  172 (531)
                      |.|+--.||....+||.|-..+++-+.. .+.+     .......+.+..+.     .++..-..+..|+--|=-- -|+
T Consensus       699 PYFSAlYGPsRHaIVV~DL~~vke~L~~L~dCPeDLYLIEGDp~aFDDSv~s~~Ele~~VvVqi~dRq~RYSrfPe-iPL  777 (1480)
T COG3096         699 PYFSALYGPSRHAIVVPDLSQVKEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPE-IPL  777 (1480)
T ss_pred             hhHHHhhCcccceeeeccHHHHHHHHhhhccCcchheeecCCCcccccccccHHHHhCceEEEechhhhhhhcCCc-ccc
Confidence            4444444546778999999999999973 2221     11122223332222     4444444566676544433 688


Q ss_pred             CChhhhcccccchHHHHHHHHHHHHH
Q 009612          173 FSPRRILSHEPGRQLDCAVMLQNIAN  198 (531)
Q Consensus       173 fs~~~l~~~~~~~~~~~~~l~~~l~~  198 (531)
                      |+.+.-.+....+..+-+.+.+....
T Consensus       778 FGrAAREqrLE~L~~eRD~v~EqhA~  803 (1480)
T COG3096         778 FGRAAREQRLESLHAERDVLSERHAT  803 (1480)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            88776655566666666666666544


No 52 
>PTZ00370 STEVOR; Provisional
Probab=21.98  E-value=1e+02  Score=28.21  Aligned_cols=11  Identities=36%  Similarity=0.933  Sum_probs=5.0

Q ss_pred             HHHHHHHHHhh
Q 009612           40 VLLYLLTWAFS   50 (531)
Q Consensus        40 ~~~~~~~~~~~   50 (531)
                      +++++-.|+++
T Consensus       270 vliilYiwlyr  280 (296)
T PTZ00370        270 VLIILYIWLYR  280 (296)
T ss_pred             HHHHHHHHHHH
Confidence            33344445555


No 53 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=21.70  E-value=2.6e+02  Score=19.18  Aligned_cols=17  Identities=6%  Similarity=0.075  Sum_probs=7.6

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009612           31 SLLSLFLALVLLYLLTW   47 (531)
Q Consensus        31 ~~~~~~~~~~~~~~~~~   47 (531)
                      +++++++++.++++..|
T Consensus         7 Li~ICVaii~lIlY~iY   23 (68)
T PF05961_consen    7 LIIICVAIIGLILYGIY   23 (68)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            33444444444454444


No 54 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=21.62  E-value=2.3e+02  Score=21.73  Aligned_cols=12  Identities=25%  Similarity=0.371  Sum_probs=8.9

Q ss_pred             CCcccccccccC
Q 009612           74 GVPLFGSLFTLS   85 (531)
Q Consensus        74 ~~p~iG~~~~~~   85 (531)
                      .-|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            378999976654


No 55 
>PRK06789 flagellar motor switch protein; Validated
Probab=21.17  E-value=1.1e+02  Score=21.70  Aligned_cols=41  Identities=10%  Similarity=0.021  Sum_probs=30.3

Q ss_pred             HHHHHhhCCCCCCCCcccccccc--ceeecCCeeeCCCCEEEech
Q 009612          389 VVKEALRVHPPGPLLSWARLSTS--DVQLSNGMLIPANTTAMVNM  431 (531)
Q Consensus       389 ~i~EtlRl~p~~~~~~~~R~~~~--d~~i~~g~~ip~g~~v~~~~  431 (531)
                      -++|-+.+.+...... -|.+.+  |+.++ |..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~L-dk~~~epvdI~vN-g~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRL-ENSTKNTVRLMLE-NEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEe-CCcCCCCEEEEEC-CEEEeEEeEEEECC
Confidence            3678888888765543 666665  45557 99999999998863


No 56 
>KOG3262 consensus H/ACA small nucleolar RNP component GAR1 [Translation, ribosomal structure and biogenesis]
Probab=21.00  E-value=72  Score=26.81  Aligned_cols=36  Identities=19%  Similarity=0.396  Sum_probs=27.7

Q ss_pred             eeeCCCCEEEechhhhhcCCCCCCCCCCCCC-CccccCC
Q 009612          419 MLIPANTTAMVNMWAITHDSQVWEDPHVFKP-ERFLEAD  456 (531)
Q Consensus       419 ~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P-~R~l~~~  456 (531)
                      +.|+..+-|..+.+.-  ..++|-||+++.| +|||+..
T Consensus       106 fsIK~~dgv~assfk~--g~k~fi~p~KllPl~RFLP~p  142 (215)
T KOG3262|consen  106 FSIKPSDGVQASSFKP--GDKLFIDPDKLLPLDRFLPQP  142 (215)
T ss_pred             EEEecCCCceeecccC--CCeEEecccccCcHhhcCCCC
Confidence            5788888777776543  3578899999998 7999753


Done!