Query         009612
Match_columns 531
No_of_seqs    226 out of 2654
Neff          10.9
Searched_HMMs 29240
Date          Mon Mar 25 09:05:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009612.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009612hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3pm0_A Cypib1, cytochrome P450 100.0 1.7E-78 5.8E-83  617.5  38.9  453   65-531     7-484 (507)
  2 3swz_A Steroid 17-alpha-hydrox 100.0 1.2E-77 4.2E-82  608.5  44.0  452   64-531     5-479 (494)
  3 3tbg_A Cytochrome P450 2D6; mo 100.0 2.7E-77 9.2E-82  604.3  43.0  449   66-531     9-476 (479)
  4 3k9v_A 1,25-dihydroxyvitamin D 100.0 6.2E-77 2.1E-81  602.2  43.9  445   64-530    21-482 (482)
  5 3s79_A Cytochrome P450 19A1; o 100.0 1.1E-76 3.8E-81  603.3  38.9  441   66-531    44-496 (503)
  6 3czh_A Cytochrome P450 2R1; vi 100.0 2.9E-76   1E-80  595.2  41.7  449   66-531    11-476 (481)
  7 2hi4_A Cytochrome P450 1A2; CY 100.0 2.7E-76 9.1E-81  598.0  41.4  453   63-531    12-488 (495)
  8 2fdv_A Cytochrome P450 2A6; CY 100.0 4.6E-76 1.6E-80  593.6  42.2  446   67-531    10-473 (476)
  9 3nxu_A Cytochrome P450 3A4; al 100.0   2E-77 6.9E-82  605.9  32.3  448   66-531    13-475 (485)
 10 3e6i_A CYPIIE1, P450-J, cytoch 100.0   7E-76 2.4E-80  593.4  43.3  449   63-531     6-472 (476)
 11 1po5_A Cytochrome P450 2B4; ox 100.0 1.2E-75 4.1E-80  590.6  39.1  446   67-531    10-473 (476)
 12 3qz1_A Steroid 21-hydroxylase; 100.0 1.9E-76 6.6E-81  600.4  33.1  438   63-531    25-484 (496)
 13 1r9o_A Cytochrome P450 2C9; mo 100.0 2.6E-75 8.8E-80  588.5  39.8  446   67-531    11-474 (477)
 14 3n9y_A Cholesterol SIDE-chain  100.0 8.1E-75 2.8E-79  587.1  38.9  450   62-531     4-475 (487)
 15 3ld6_A Lanosterol 14-alpha dem 100.0 1.5E-75 5.2E-80  587.3  30.2  438   64-531     8-454 (461)
 16 2ij2_A Cytochrome P450 BM3; mo 100.0 3.1E-73 1.1E-77  571.1  38.1  441   66-531     2-452 (470)
 17 2ve3_A Putative cytochrome P45 100.0 8.1E-73 2.8E-77  564.2  38.4  427   66-531    11-444 (444)
 18 3gw9_A Sterol 14alpha-demethyl 100.0 8.4E-73 2.9E-77  566.8  35.9  438   66-531     2-450 (450)
 19 3mdm_A Cholesterol 24-hydroxyl 100.0   8E-72 2.7E-76  560.2  40.3  425   87-531    10-442 (456)
 20 2cib_A Cytochrome P450 51; hem 100.0 2.3E-72 7.7E-77  562.8  32.3  436   67-531     4-449 (455)
 21 3dbg_A Putative cytochrome P45 100.0 6.9E-72 2.4E-76  561.7  29.4  433   66-530    22-461 (467)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 3.5E-71 1.2E-75  556.1  29.9  437   63-528     7-452 (461)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 1.6E-67 5.3E-72  534.3  27.2  438   66-529    12-484 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 3.4E-67 1.2E-71  531.2  26.1  439   64-528    10-483 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 1.7E-65 5.8E-70  520.0  32.0  440   66-530    17-489 (498)
 26 2cd8_A Cytochrome P450 monooxy 100.0 1.9E-65 6.4E-70  507.8  31.4  393   66-531    25-429 (436)
 27 3b98_A Prostaglandin I2 syntha 100.0 1.1E-65 3.7E-70  518.6  29.1  432   66-531    17-471 (475)
 28 1izo_A P450bsbeta, cytochrome  100.0 8.3E-64 2.8E-68  494.9  37.3  405   68-531     4-416 (417)
 29 1n97_A CYP175A1; electron tran 100.0 3.1E-65 1.1E-69  499.8  22.8  385   70-530     2-386 (389)
 30 1ued_A P450 OXYC, P450 monooxy 100.0 7.5E-63 2.6E-67  485.2  33.4  384   66-527     9-406 (406)
 31 3awm_A Fatty acid alpha-hydrox 100.0 1.6E-62 5.6E-67  485.4  35.6  401   69-530     4-413 (415)
 32 1jfb_A Nitric-oxide reductase  100.0 6.8E-62 2.3E-66  479.2  36.3  370   68-504     2-382 (404)
 33 1cpt_A Cytochrome P450-TERP; o 100.0 6.1E-62 2.1E-66  482.4  32.4  401   66-530     5-428 (428)
 34 2jjn_A Cytochrome P450 113A1;  100.0 6.7E-62 2.3E-66  479.5  32.1  385   66-531    18-407 (411)
 35 3aba_A Cytochrome P450; oxidor 100.0 2.1E-61 7.3E-66  474.4  33.7  373   87-531    19-403 (403)
 36 2zbx_A Cytochrome P450-SU1; be 100.0 8.9E-61   3E-65  471.4  36.6  389   66-527     4-406 (412)
 37 1s1f_A Putative cytochrome P45 100.0 3.4E-61 1.2E-65  473.4  32.4  386   66-528     7-405 (406)
 38 3ejb_B Biotin biosynthesis cyt 100.0 4.1E-60 1.4E-64  466.5  36.9  376   87-530    13-396 (404)
 39 2zwu_A Camphor 5-monooxygenase 100.0 9.3E-61 3.2E-65  470.7  32.1  394   60-531     4-411 (415)
 40 1odo_A Putative cytochrome P45 100.0 2.5E-60 8.7E-65  467.8  34.7  376   87-529    15-407 (408)
 41 3buj_A CALO2; heme, iron, meta 100.0 4.7E-60 1.6E-64  464.4  36.4  373   87-530    13-396 (397)
 42 3abb_A CYP105D6, cytochrome P4 100.0 4.8E-61 1.7E-65  472.9  27.9  372   87-531    24-408 (408)
 43 4fb2_A P450CIN; heme, monooxyg 100.0 6.6E-61 2.2E-65  470.7  28.5  372   87-531    19-394 (398)
 44 3a4g_A Vitamin D hydroxylase;  100.0   5E-60 1.7E-64  465.2  33.0  371   87-531    20-402 (411)
 45 1gwi_A CYP154C1, cytochrome P4 100.0 1.8E-60 6.1E-65  468.7  29.6  375   87-531    17-410 (411)
 46 2dkk_A Cytochrome P450; CYP158 100.0 3.5E-60 1.2E-64  465.9  30.9  373   87-531    27-411 (411)
 47 2y5n_A MYCG, P-450-like protei 100.0 1.3E-59 4.5E-64  462.8  33.8  370   87-527    37-417 (417)
 48 3dsk_A Cytochrome P450 74A, ch 100.0 1.9E-61 6.4E-66  489.9  20.9  416   62-509    23-477 (495)
 49 1z8o_A 6-deoxyerythronolide B  100.0 1.8E-59 6.1E-64  461.1  33.8  369   87-527    14-402 (404)
 50 1q5d_A P450 epoxidase; cytochr 100.0 8.5E-60 2.9E-64  465.4  30.9  377   87-531    26-417 (419)
 51 2xkr_A CYP142, putative cytoch 100.0 4.7E-59 1.6E-63  457.5  35.8  373   87-531    18-395 (398)
 52 2z36_A MOXA, cytochrome P450 t 100.0 1.4E-59 4.8E-64  462.3  32.0  387   65-528     5-408 (413)
 53 2xbk_A PIMD protein; epoxidati 100.0   9E-59 3.1E-63  454.5  35.9  364   87-527    26-404 (404)
 54 2z3t_A Cytochrome P450; monoxy 100.0 2.4E-59 8.3E-64  462.4  31.2  378   87-530    20-416 (425)
 55 3lxh_A Cytochrome P450; heme,  100.0 5.5E-59 1.9E-63  460.2  33.2  375   87-531    38-418 (421)
 56 3dan_A Cytochrome P450 74A2; A 100.0   2E-59 6.9E-64  472.5  29.5  411   63-509     5-459 (473)
 57 3ivy_A Cytochrome P450 CYP125; 100.0 2.7E-59 9.1E-64  463.6  29.1  391   66-531    17-429 (433)
 58 3nc3_A Cytochrome P450 CYPX; c 100.0 6.1E-60 2.1E-64  468.6  23.6  384   87-529    53-440 (441)
 59 3tkt_A Cytochrome P450; aromat 100.0 9.8E-59 3.3E-63  461.6  32.2  382   89-529    47-449 (450)
 60 3tyw_A Putative cytochrome P45 100.0 2.4E-58 8.2E-63  455.1  33.7  350   87-504    29-389 (417)
 61 2uuq_A CYP130, cytochrome P450 100.0 3.2E-59 1.1E-63  459.9  27.0  370   87-530    25-413 (414)
 62 3oft_A Cytochrome P450, CYP101 100.0 1.1E-58 3.6E-63  455.2  30.4  367   87-528    24-395 (396)
 63 2wm5_A CYP124, putative cytoch 100.0 9.3E-58 3.2E-62  452.1  35.1  376   87-527    44-434 (435)
 64 1n40_A P450 MT2, cytochrome P4 100.0 1.6E-58 5.4E-63  452.9  29.1  365   87-527    16-396 (396)
 65 1lfk_A OXYB, P450 monooxygenas 100.0 2.5E-58 8.7E-63  452.0  29.6  360   95-526    21-397 (398)
 66 3mgx_A Putative P450 monooxyge 100.0 1.6E-58 5.5E-63  454.3  28.0  370   87-530    37-415 (415)
 67 3r9b_A Cytochrome P450 164A2;  100.0 9.2E-58 3.1E-62  451.8  31.4  377   87-531    29-418 (418)
 68 3oo3_A OXY protein; cytochrome 100.0 2.4E-57 8.4E-62  443.6  32.9  366   87-527    12-384 (384)
 69 3rwl_A Cytochrome P450 alkane  100.0 7.9E-57 2.7E-61  444.2  34.3  376   87-529    38-426 (426)
 70 2wiy_A XPLA-heme, cytochrome P 100.0   2E-56 6.8E-61  437.4  32.2  372   87-527    20-393 (394)
 71 3p3o_A Cytochrome P450; monoox 100.0 2.6E-56   9E-61  439.8  28.8  382   75-529    24-415 (416)
 72 1io7_A Cytochrome P450 CYP119; 100.0 5.8E-56   2E-60  430.5  26.8  353   90-531     2-368 (368)
 73 3b4x_A 367AA long hypothetical 100.0 6.5E-56 2.2E-60  429.4  26.7  351   90-529     2-366 (367)
 74 2rfb_A Cytochrome P450; heme,  100.0 1.9E-55 6.5E-60  422.7  24.4  320   98-506     2-326 (343)
 75 4dnj_A Putative cytochrome P45 100.0 6.6E-54 2.2E-58  421.5  28.2  385   72-529    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 3.5E-49 1.2E-53  386.9  32.2  374   87-528    37-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0   2E-47 6.7E-52  365.8   2.4  331   68-526    35-380 (381)
 78 2diu_A KIAA0430 protein; struc  34.6      80  0.0027   22.6   5.1   61   76-139    12-76  (96)
 79 1m46_B IQ4, IQ4 motif from MYO  27.9      48  0.0016   16.2   2.0   12  359-370     8-19  (26)
 80 3lqv_A PRE-mRNA branch site pr  21.8 2.1E+02  0.0073   20.6   6.1   58   68-130     3-65  (115)
 81 2dgu_A Heterogeneous nuclear r  21.5   2E+02  0.0068   20.3   5.7   50   76-130    14-63  (103)

No 1  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.7e-78  Score=617.46  Aligned_cols=453  Identities=23%  Similarity=0.372  Sum_probs=364.0

Q ss_pred             CCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhc--CCCCCCCCcchh
Q 009612           65 GSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILT--SPHFADRPIKQS  142 (531)
Q Consensus        65 ~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~--~~~~~~~~~~~~  142 (531)
                      +.+.||||+++|++||++.+. ++++..+.+|+++|  |+||++++| +.++|+|+||+++++|+.  ...|.+++....
T Consensus         7 ~~~~pPgP~~~P~iG~~~~~~-~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~   82 (507)
T 3pm0_A            7 SKGKPPGPFAWPLIGNAAAVG-QAAHLSFARLARRY--GDVFQIRLG-SCPIVVLNGERAIHQALVQQGSAFADRPSFAS   82 (507)
T ss_dssp             ----------------------CCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHTTTTTTSCBCCCCHH
T ss_pred             CCCCCcCCCCCCeeCchhhcC-ccHHHHHHHHHHHh--CCEEEEEEC-CccEEEECCHHHHHHHHHhCcHhhCCCCcchH
Confidence            367899999999999999987 78999999999999  899999999 999999999999999996  367888877665


Q ss_pred             hhhhhcccceecCCCChhHHHHHHHHhhccCChhhhc------ccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 009612          143 AECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRIL------SHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAA  216 (531)
Q Consensus       143 ~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~------~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  216 (531)
                      ......|.+++++.+|+.|+++||.+ .+.|+.....      .+.+.+.++++.+++.+.....+++++|+.+++..++
T Consensus        83 ~~~~~~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~  161 (507)
T 3pm0_A           83 FRVVSGGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAV  161 (507)
T ss_dssp             HHHGGGGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHH
T ss_pred             HHhhcCCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHH
Confidence            55545567777777899999999999 5555433333      3789999999999999987665677899999999999


Q ss_pred             HHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhh---HHHHHHhHhHHHHHHHHHHHH
Q 009612          217 LNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFR---IHERCLKLVPRVKNFVRGIIE  293 (531)
Q Consensus       217 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~---~~~~~~~~~~~~~~~~~~~i~  293 (531)
                      +|+++.++||.+++..+  +....+.+.+..............++|++.++  +..   ..+++.+..+.+.+++.+.++
T Consensus       162 ~dvi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l--p~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (507)
T 3pm0_A          162 ANVMSAVCFGCRYSHDD--PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYF--PNPVRTVFREFEQLNRNFSNFILDKFL  237 (507)
T ss_dssp             HHHHHHHHTSCCCCTTC--HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGS--CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccccCCCCC--HHHHHHHHHHHHHHHhcccchHHHHhHHHHHc--CchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987654  45566666666666655555566678888777  333   456777788889999999999


Q ss_pred             HHHhhhccCCCCCCccHHHHHHhhhcC---C-------CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHH
Q 009612          294 EHRRLKNSTKLGDNADFVDVLLSLEGE---E-------KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAK  363 (531)
Q Consensus       294 ~~~~~~~~~~~~~~~d~~~~ll~~~~~---~-------~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~  363 (531)
                      ++++..+.+  +...|+++.+++..++   +       .++++++.+++..+++||+|||+++++|++++|++||++|+|
T Consensus       238 ~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~k  315 (507)
T 3pm0_A          238 RHCESLRPG--AAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTR  315 (507)
T ss_dssp             HHHHHCCTT--CCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHhccccc--cCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHH
Confidence            888765543  2578999999865321   1       489999999999999999999999999999999999999999


Q ss_pred             HHHHHHhh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCC
Q 009612          364 LHAELQAV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQV  440 (531)
Q Consensus       364 l~~Ei~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~  440 (531)
                      ||+||+++   ++.++++++++||||+|||+||||++|+++... +|.+.+|++++ ||.||||+.|+++.+++||||++
T Consensus       316 l~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~-~r~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~  393 (507)
T 3pm0_A          316 VQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTI-PHATTANTSVL-GYHIPKDTVVFVNQWSVNHDPLK  393 (507)
T ss_dssp             HHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCS-CEECSSCEEET-TEEECTTCEEEEBSHHHHSCTTT
T ss_pred             HHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCC-CccccCCceEc-CEEECCCCEEEeChHHHhCCccc
Confidence            99999998   467899999999999999999999999999743 89999999999 99999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCcCCCC-CCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccc
Q 009612          441 WEDPHVFKPERFLEADVDVRG-GDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEM  519 (531)
Q Consensus       441 ~~dp~~F~P~R~l~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  519 (531)
                      |+||++|+||||++++..... .+..++|||.|+|.|+|++||.+|++++++.|+++|++++.++.+.++....+++..|
T Consensus       394 ~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p  473 (507)
T 3pm0_A          394 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKP  473 (507)
T ss_dssp             CSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEE
T ss_pred             CCCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccC
Confidence            999999999999986543211 1247999999999999999999999999999999999999876555555556777777


Q ss_pred             cCceeEEEeeCC
Q 009612          520 KNPLRAVAVDRN  531 (531)
Q Consensus       520 ~~~~~v~~~~r~  531 (531)
                       +++.|++++|+
T Consensus       474 -~~~~v~~~~R~  484 (507)
T 3pm0_A          474 -KSFKVNVTLRE  484 (507)
T ss_dssp             -CSCCEEEEESS
T ss_pred             -CCcEEEEEEcc
Confidence             67899999995


No 2  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=1.2e-77  Score=608.47  Aligned_cols=452  Identities=23%  Similarity=0.373  Sum_probs=373.5

Q ss_pred             CCCCCCCCCCCCcccccccccCC-CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcc
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLSR-GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIK  140 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~~-~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~  140 (531)
                      ++.+.||||+++|++||++.+.+ +..+..+.+|+++|  |+||++++| ++++|+|+||+.+++|+.+  ..|++++..
T Consensus         5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kY--G~i~~~~~g-~~~~vvv~~p~~~k~il~~~~~~f~~rp~~   81 (494)
T 3swz_A            5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKY--GPIYSVRMG-TKTTVIVGHHQLAKEVLIKKGKDFSGRPQM   81 (494)
T ss_dssp             -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHTTTTTTTBBCCCC
T ss_pred             CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHc--CCEEEEEeC-CCCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence            44678999999999999998864 36889999999999  899999999 9999999999999999984  678888776


Q ss_pred             hhhhhhhc-ccceecCCCChhHHHHHHHHhhccCCh--hhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHH
Q 009612          141 QSAECLMF-SRAIGFAPNGTYWRLLRRIASSHLFSP--RRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAAL  217 (531)
Q Consensus       141 ~~~~~~~~-g~~~~~~~~g~~w~~~Rr~l~~~~fs~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  217 (531)
                      ........ +.+++++.+|+.|+++||.+ .+.|+.  ..+..+.+.+.++++.+++.+...  .++++|+...+..+++
T Consensus        82 ~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~t~  158 (494)
T 3swz_A           82 ATLDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATH--NGQSIDISFPVFVAVT  158 (494)
T ss_dssp             HHHHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT--TTEEECCHHHHHHHHH
T ss_pred             HHHHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc--CCCcccHHHHHHHHHH
Confidence            54433222 46777776799999999999 666763  456788999999999999998753  5678999999999999


Q ss_pred             HHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHh
Q 009612          218 NNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRR  297 (531)
Q Consensus       218 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  297 (531)
                      |+|+.++||.+++..+  +....+.+..+..........+.+++|+++++  +....+.+.+..+.+.+++++.++++++
T Consensus       159 dvi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~--p~~~~~~~~~~~~~~~~~~~~~i~~~~~  234 (494)
T 3swz_A          159 NVISLICFNTSYKNGD--PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIF--PNKTLEKLKSHVKIRNDLLNKILENYKE  234 (494)
T ss_dssp             HHHHHHHHSCCCCTTC--THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTS--CCSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHcCCcCCCCC--HHHHHHHHHHHHHHHhcccchHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987543  33444444445545555555667788998887  5555567777788888888888888776


Q ss_pred             hhccCCCCCCccHHHHHHhhhc------------CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHH
Q 009612          298 LKNSTKLGDNADFVDVLLSLEG------------EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLH  365 (531)
Q Consensus       298 ~~~~~~~~~~~d~~~~ll~~~~------------~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~  365 (531)
                      ....+   ...|+++.++++..            ++.++++++.+++..+++||+|||+++++|++++|++||++|+|+|
T Consensus       235 ~~~~~---~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~  311 (494)
T 3swz_A          235 KFRSD---SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLY  311 (494)
T ss_dssp             TCCTT---CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             hhccc---chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            54332   46799999998642            1248999999999999999999999999999999999999999999


Q ss_pred             HHHHhh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCC
Q 009612          366 AELQAV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWE  442 (531)
Q Consensus       366 ~Ei~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~  442 (531)
                      +||+++   ++.++++++++||||+|||+|+||++|+++... +|.+++|++++ ||.||||+.|+++.+++||||++|+
T Consensus       312 ~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~r~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~  389 (494)
T 3swz_A          312 EEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLI-PHKANVDSSIG-EFAVDKGTEVIINLWALHHNEKEWH  389 (494)
T ss_dssp             HHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCS-CEECSSSEEET-TEEECTTCEEEECHHHHHHCTTTSS
T ss_pred             HHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCccccc-ceecCCCceEC-CEEeCCCCEEEEehHHhhCCcccCC
Confidence            999998   567999999999999999999999999999843 89999999999 9999999999999999999999999


Q ss_pred             CCCCCCCCccccCCcCC-CCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC-CCcccccccccccc
Q 009612          443 DPHVFKPERFLEADVDV-RGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP-ADLSEVLKLSCEMK  520 (531)
Q Consensus       443 dp~~F~P~R~l~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~  520 (531)
                      ||++|+||||++++... ..+...++|||.|+|.|+|++||++|++++++.|+++|+|+++++.+ +.+....+++..| 
T Consensus       390 dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-  468 (494)
T 3swz_A          390 QPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-  468 (494)
T ss_dssp             STTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-
T ss_pred             CcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-
Confidence            99999999999865432 12446799999999999999999999999999999999999886533 3344455667666 


Q ss_pred             CceeEEEeeCC
Q 009612          521 NPLRAVAVDRN  531 (531)
Q Consensus       521 ~~~~v~~~~r~  531 (531)
                      +++.|+++||+
T Consensus       469 ~~~~v~~~~R~  479 (494)
T 3swz_A          469 DSFKVKIKVRQ  479 (494)
T ss_dssp             CCCCEEEEECH
T ss_pred             CCcEEEEEEcC
Confidence            89999999994


No 3  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=2.7e-77  Score=604.32  Aligned_cols=449  Identities=23%  Similarity=0.361  Sum_probs=356.3

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~  143 (531)
                      .+.||||+++|++||++.+..++.+..+.+|++||  |+||++++| ++++|+|+||+++++||.+  ..|+.|+.....
T Consensus         9 ~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kY--G~i~~~~~g-~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~   85 (479)
T 3tbg_A            9 GKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRF--GDVFSLQLA-WTPVVVLNGLAAVREALVTHGEDTADRPPVPIT   85 (479)
T ss_dssp             CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHH--CSEEEEEET-TEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGG
T ss_pred             CCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHh--CCEEEEEEC-CeeEEEECCHHHHHHHHHhCChhhcCCCchHHH
Confidence            46899999999999999987678899999999999  899999999 9999999999999999974  567777766555


Q ss_pred             hhhhcc---cceecCCCChhHHHHHHHHhhccCChhhhcc--cccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHH
Q 009612          144 ECLMFS---RAIGFAPNGTYWRLLRRIASSHLFSPRRILS--HEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALN  218 (531)
Q Consensus       144 ~~~~~g---~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  218 (531)
                      ....++   .+++++.+|+.|+++|+.+ .+.|+...+..  +.+.+......+...+...  .++.+|+...+..+++|
T Consensus        86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~  162 (479)
T 3tbg_A           86 QILGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANH--SGRPFRPNGLLDKAVSN  162 (479)
T ss_dssp             GGGTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT--TTCCBCTHHHHHHHHHH
T ss_pred             HHhccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhc--cCCcccHHHHHHHHHHH
Confidence            444333   5566777899999999999 56666655533  3455555666666655443  56789999999999999


Q ss_pred             HHHHHHhccccccCCCchhHHHHHHHHHHHHHhhccc--ccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHH
Q 009612          219 NIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAF--NWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHR  296 (531)
Q Consensus       219 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  296 (531)
                      +++.++||.+++..+  .......+............  ......|+...+   ....++.....+...+.+.+.+++..
T Consensus       163 ~~~~~~fg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (479)
T 3tbg_A          163 VIASLTCGRRFEYDD--PRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI---PALAGKVLRFQKAFLTQLDELLTEHR  237 (479)
T ss_dssp             HHHHHHHSCCCCTTC--HHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS---HHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCcccccc--hhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc---hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998765  34444444444443322221  111122332222   22334455556667777777777766


Q ss_pred             hhhccCCCCCCccHHHHHHhhh------cCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q 009612          297 RLKNSTKLGDNADFVDVLLSLE------GEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQA  370 (531)
Q Consensus       297 ~~~~~~~~~~~~d~~~~ll~~~------~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  370 (531)
                      +..+..  ....|..+.+....      ....++++++.+++.++++||+|||+++++|++++|++||++|+|||+||++
T Consensus       238 ~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  315 (479)
T 3tbg_A          238 MTWDPA--QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDD  315 (479)
T ss_dssp             HHCCTT--SCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             Hhhhcc--cccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence            654433  24566666655431      2236999999999999999999999999999999999999999999999998


Q ss_pred             h---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCC
Q 009612          371 V---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVF  447 (531)
Q Consensus       371 ~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F  447 (531)
                      +   ++.++.+++++||||+|||+||||++|+++... +|.+.+|++++ ||.||||+.|+++.+++||||++|+||++|
T Consensus       316 ~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~-~~~~~~d~~~~-g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F  393 (479)
T 3tbg_A          316 VIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGV-THMTSRDIEVQ-GFRIPKGTTLITNLSSVLKDEAVWEKPFRF  393 (479)
T ss_dssp             HTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCC-CEECSSCEEET-TEEECTTCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred             HHhhccccchhhhccccccccceeeeccccccccccc-eeecCCCceEC-CEEecCCCeeeechhhhcCChhhCCCcccc
Confidence            8   678999999999999999999999999999874 56778999999 999999999999999999999999999999


Q ss_pred             CCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCC-CccccccccccccCceeEE
Q 009612          448 KPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPA-DLSEVLKLSCEMKNPLRAV  526 (531)
Q Consensus       448 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~  526 (531)
                      +||||++++... .++..|+|||+|+|.|+|++||++|+++++|.||++|+|+++++.+. ......+++..| +++.|+
T Consensus       394 ~PeRfl~~~~~~-~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P-~~~~v~  471 (479)
T 3tbg_A          394 HPEHFLDAQGHF-VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSP-SPYELC  471 (479)
T ss_dssp             CGGGGBCTTCCB-CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEE-CCCCBE
T ss_pred             CccccCCCCccc-CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecC-CCeEEE
Confidence            999999876543 24567999999999999999999999999999999999999887543 344456777777 799999


Q ss_pred             EeeCC
Q 009612          527 AVDRN  531 (531)
Q Consensus       527 ~~~r~  531 (531)
                      ++||+
T Consensus       472 ~~pRs  476 (479)
T 3tbg_A          472 AVPRH  476 (479)
T ss_dssp             EEEC-
T ss_pred             EEECC
Confidence            99996


No 4  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=6.2e-77  Score=602.17  Aligned_cols=445  Identities=21%  Similarity=0.306  Sum_probs=370.4

Q ss_pred             CCCCCCCCCCCCcccccccccC----CCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCC
Q 009612           64 RGSVAIPGPKGVPLFGSLFTLS----RGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRP  138 (531)
Q Consensus        64 ~~~~~~PgP~~~p~iG~~~~~~----~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~  138 (531)
                      ++++.+|||+++|++||++.+.    .++++..+.+|+++|  |+||++++| +.++|+++||+++++|+.+ ..|.+++
T Consensus        21 ~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~Y--G~i~~~~~g-~~~~vvv~dp~~~~~il~~~~~~~~r~   97 (482)
T 3k9v_A           21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKY--GQIFRMKLG-SFDSVHLGSPSLLEALYRTESAHPQRL   97 (482)
T ss_dssp             EEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHHTCCSSCCCC
T ss_pred             CCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHc--CCEEEEccC-CCCEEEEcCHHHHHHHHHhcCCCCCCC
Confidence            4488999999999999998873    246889999999999  899999999 8999999999999999985 6677776


Q ss_pred             cchhh--hh-h-hcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhc-CCCccchHHHHH
Q 009612          139 IKQSA--EC-L-MFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQK-HNGFVSLRKHLQ  213 (531)
Q Consensus       139 ~~~~~--~~-~-~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~  213 (531)
                      .....  .. . ..+.++++ .+|+.|+++||.+...++++..++.+.+.++++++.+++.+.+... +++++|+.+++.
T Consensus        98 ~~~~~~~~~~~~~~~~~l~~-~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~  176 (482)
T 3k9v_A           98 EIKPWKAYRDHRNEAYGLMI-LEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELN  176 (482)
T ss_dssp             CCHHHHHHHHHHTCCCCTTT-CCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHH
T ss_pred             CchHHHHHHHhcCCCCCcee-CCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence            54322  11 1 13466644 4899999999999555568888999999999999999999987653 466899999999


Q ss_pred             HHHHHHHHHHHhccccccCCC--chhHHHHHHHHHHHHHhhcccccccchh--hhhhhcChhhHHHHHHhHhHHHHHHHH
Q 009612          214 LAALNNIMGSVFGVRYDIDRD--SKSLQELTEMVREGFELLGAFNWSDYLP--WMSLFYDPFRIHERCLKLVPRVKNFVR  289 (531)
Q Consensus       214 ~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~l~~~~~~~~~~~~~~~~~~~~~~  289 (531)
                      .+++|+++.++||.+++..++  .+....+.+.+...+......   ..+|  ++.++  +....++..+..+.+.++++
T Consensus       177 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~l--~~~~~~~~~~~~~~~~~~~~  251 (482)
T 3k9v_A          177 KWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKM---MVTPVELHKRL--NTKVWQAHTLAWDTIFKSVK  251 (482)
T ss_dssp             HHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGG---SSSCHHHHHHH--TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHH---HhhhHHHHHhc--CCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999976542  123456666666665443221   2233  33333  33444566677778888888


Q ss_pred             HHHHHHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 009612          290 GIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQ  369 (531)
Q Consensus       290 ~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~  369 (531)
                      +.++++++....+   ...|++..+++.   ++++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+
T Consensus       252 ~~i~~r~~~~~~~---~~~d~l~~ll~~---~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  325 (482)
T 3k9v_A          252 PCIDNRLQRYSQQ---PGADFLCDIYQQ---DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ  325 (482)
T ss_dssp             HHHHHHHHHTTTC---TTSCHHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccC---CchHHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            8998887654332   457888887764   3589999999999999999999999999999999999999999999999


Q ss_pred             hh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCC
Q 009612          370 AV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHV  446 (531)
Q Consensus       370 ~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~  446 (531)
                      ++   ++.++++++++||||+|||+||||++|+++..  +|.+.+|++++ ||.||||+.|+++.+++||||++|+||++
T Consensus       326 ~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~  402 (482)
T 3k9v_A          326 SVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT--TRTLDKPTVLG-EYALPKGTVLTLNTQVLGSSEDNFEDSHK  402 (482)
T ss_dssp             HHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEE--EEECSSCEEET-TEEECTTCEEEEECSGGGGCTTTCSSTTS
T ss_pred             HHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCc--ccccCCceeeC-CEEECCCCEEEEccccccCCCccCCCcCc
Confidence            98   46789999999999999999999999999986  89999999998 99999999999999999999999999999


Q ss_pred             CCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEE
Q 009612          447 FKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAV  526 (531)
Q Consensus       447 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  526 (531)
                      |+||||++++..  ..+..++|||.|+|.|+|++||++|+++++++|+++|++++.++.+.+.  ..+.++.|.+++.|+
T Consensus       403 F~PeRfl~~~~~--~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~p~~~~~~~  478 (482)
T 3k9v_A          403 FRPERWLQKEKK--INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEM--LHLGILVPSRELPIA  478 (482)
T ss_dssp             CCGGGGTCTTSC--CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCE--EESSSEEESSSCCEE
T ss_pred             cCccccCCCCCC--CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCccc--ccceeecCCCCcceE
Confidence            999999986542  3566899999999999999999999999999999999999887654443  445777899999999


Q ss_pred             EeeC
Q 009612          527 AVDR  530 (531)
Q Consensus       527 ~~~r  530 (531)
                      +++|
T Consensus       479 ~~~R  482 (482)
T 3k9v_A          479 FRPR  482 (482)
T ss_dssp             EEEC
T ss_pred             EeeC
Confidence            9998


No 5  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=1.1e-76  Score=603.30  Aligned_cols=441  Identities=18%  Similarity=0.243  Sum_probs=364.7

Q ss_pred             CCCCCCCCCCcccccccccCC---CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSR---GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQS  142 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~---~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~  142 (531)
                      .+.||||+++|++||++.+..   ...+..+.+|+++|  |+||++++| +.++|+|+||+++++|+++..|++++....
T Consensus        44 ~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~~g-~~~~vvv~~p~~~~~il~~~~~~~r~~~~~  120 (503)
T 3s79_A           44 TSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVY--GEFMRVWIS-GEETLIISKSSSMFHIMKHNHYSSRFGSKL  120 (503)
T ss_dssp             -CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHS--CSEEEEESS-SSEEEEECCHHHHHHHHHSGGGCCCCCCHH
T ss_pred             cCCCCCCCCCceeeehhccccccccchhHHHHHHHHHh--CCeEEEEeC-CccEEEECCHHHHHHHHhcCCCCCcchhhh
Confidence            578999999999999988752   13456888999999  899999999 999999999999999998777777765443


Q ss_pred             hhhh--hcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          143 AECL--MFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       143 ~~~~--~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      ....  ..|.+++++.+|+.|+++||.+ .+.|+...++.+.+.+.++++++++.+.+..+.++++|+.+++..+++|++
T Consensus       121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi  199 (503)
T 3s79_A          121 GLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTS  199 (503)
T ss_dssp             HHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHH
Confidence            3222  2356777777899999999999 688999999999999999999999988765556678999999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhc
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKN  300 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (531)
                      +.++||.+++..   +....+.+.+.........   ...++.   +   ....++..+..+.+.+++++.++++++..+
T Consensus       200 ~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (503)
T 3s79_A          200 NTLFLRIPLDES---AIVVKIQGYFDAWQALLIK---PDIFFK---I---SWLYKKYEKSVKDLKDAIEVLIAEKRRRIS  267 (503)
T ss_dssp             HHHHTCCCCCHH---HHHHHHHHHHHHHHHHTTC---CHHHHH---S---GGGTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCcccCch---hHHHHHHHHHHHHHHHhcC---cHHHhh---c---chhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999987521   1223333333332221111   111111   1   112345667788899999999998887655


Q ss_pred             cCCC-CCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--cCCCCh
Q 009612          301 STKL-GDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--NSKITD  377 (531)
Q Consensus       301 ~~~~-~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--~~~~~~  377 (531)
                      .+.. ++..|+++.+++..++++++++++.+++..+++||+|||+++++|++++|++||++|+|+|+||+++  ++.+++
T Consensus       268 ~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~  347 (503)
T 3s79_A          268 TEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKI  347 (503)
T ss_dssp             TCTTTTTTCCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSCCCH
T ss_pred             cccccchHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCH
Confidence            3321 2345999999988777789999999999999999999999999999999999999999999999999  678999


Q ss_pred             hccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCc
Q 009612          378 ADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADV  457 (531)
Q Consensus       378 ~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~  457 (531)
                      +++++|||++|||+|++|++|+++..  .|.+++|++++ ||.||||+.|+++.+++|+| ++|+||++|+||||++.. 
T Consensus       348 ~~~~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~-  422 (503)
T 3s79_A          348 DDIQKLKVMENFIYESMRYQPVVDLV--MRKALEDDVID-GYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV-  422 (503)
T ss_dssp             HHHTTCHHHHHHHHHHHHHSCSSCCE--EEECSSCEEET-TEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC-
T ss_pred             HHHhcCHHHHHHHHhhhccCCCcccc--cccccCCeeEC-CEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC-
Confidence            99999999999999999999999987  79999999999 99999999999999999998 999999999999999642 


Q ss_pred             CCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCC-CccccccccccccCc---eeEEEeeCC
Q 009612          458 DVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPA-DLSEVLKLSCEMKNP---LRAVAVDRN  531 (531)
Q Consensus       458 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~---~~v~~~~r~  531 (531)
                          +...++|||.|+|.|+|++||++|++++++.|+++|+++++++.+. +.....+++..|..+   +.|+++||+
T Consensus       423 ----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~  496 (503)
T 3s79_A          423 ----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRN  496 (503)
T ss_dssp             ----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC
T ss_pred             ----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCC
Confidence                3346999999999999999999999999999999999999877543 444566788888765   999999996


No 6  
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=2.9e-76  Score=595.18  Aligned_cols=449  Identities=25%  Similarity=0.394  Sum_probs=369.2

Q ss_pred             CCCCCCCCCCcccccccccCCCc--hhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcch
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGL--AHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQ  141 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~--~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~  141 (531)
                      .+.||||+++|++||++.+....  ++..+.+++++|  |+|+++++| ++++++|+||+.+++|+.+  ..|++++...
T Consensus        11 ~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g-~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~   87 (481)
T 3czh_A           11 MGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVY--GEIFSLDLG-GISTVVLNGYDVVKECLVHQSEIFADRPCLP   87 (481)
T ss_dssp             -CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHH--CSEEEEEET-TEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred             CCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHh--CCEEEEEEC-CccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence            46799999999999998876333  889999999999  899999999 8999999999999999985  4687776543


Q ss_pred             hhhhhhcccceecCCCChhHHHHHHHHhhccCChhhh--cccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH
Q 009612          142 SAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRI--LSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNN  219 (531)
Q Consensus       142 ~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  219 (531)
                      .......+.++++..+|+.|+++||.+ .+.|++..+  ..+++.+.++++.+++.+...  +++++|+.+.+..+++|+
T Consensus        88 ~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~v  164 (481)
T 3czh_A           88 LFMKMTKMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETY--KGRPFDFKQLITNAVSNI  164 (481)
T ss_dssp             HHHHHHTTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT--TTCCBCCHHHHHHHHHHH
T ss_pred             HHHhhcCCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHH
Confidence            332222234655667899999999999 677776544  568899999999999999754  456799999999999999


Q ss_pred             HHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccc--cccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHh
Q 009612          220 IMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFN--WSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRR  297 (531)
Q Consensus       220 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  297 (531)
                      ++.++||.+++..+  +....+.+.+...+.......  +...+|++.++  +....++..+..+.+.+++.+.|+++++
T Consensus       165 i~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l--p~~~~~~~~~~~~~~~~~~~~~i~~r~~  240 (481)
T 3czh_A          165 TNLIIFGERFTYED--TDFQHMIELFSENVELAASASVFLYNAFPWIGIL--PFGKHQQLFRNAAVVYDFLSRLIEKASV  240 (481)
T ss_dssp             HHHHHHSSCCCTTC--HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGC--SSSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCCCCCCC--HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhC--CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987433  445566666666554432211  34557777555  4344566777888899999999998876


Q ss_pred             hhccCCCCCCccHHHHHHhhhc------CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh
Q 009612          298 LKNSTKLGDNADFVDVLLSLEG------EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV  371 (531)
Q Consensus       298 ~~~~~~~~~~~d~~~~ll~~~~------~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~  371 (531)
                      ..+.+   ...|+++.+++..+      +..++++++.+++.++++||+|||+++++|++++|++||++|+|||+|++++
T Consensus       241 ~~~~~---~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  317 (481)
T 3czh_A          241 NRKPQ---LPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI  317 (481)
T ss_dssp             TCCTT---CCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hcCCC---chHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHh
Confidence            53322   45799999987642      2259999999999999999999999999999999999999999999999998


Q ss_pred             ---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCC
Q 009612          372 ---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFK  448 (531)
Q Consensus       372 ---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~  448 (531)
                         ++.++++++++||||+|||+|+||++|+++... +|.+++|++++ ||.||||+.|+++.+++||||++|+||++||
T Consensus       318 ~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~  395 (481)
T 3czh_A          318 MGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGI-FHATSEDAVVR-GYSIPKGTTVITNLYSVHFDEKYWRDPEVFH  395 (481)
T ss_dssp             TCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCS-CEECSSCEEET-TEEECTTCEEEEEHHHHHTCTTTCSSTTSCC
T ss_pred             cCCCCCCChhhhhhChHHHHHHHHHHhhccccccCc-ceeecCCeEEe-CEEcCCCCEEEechHHHhCCcccCCCccccC
Confidence               467999999999999999999999999999532 89999999998 9999999999999999999999999999999


Q ss_pred             CCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEe
Q 009612          449 PERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       449 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  528 (531)
                      ||||++++... ..+..++|||.|+|.|+|++||++|++++++.|+++|+++++++.+.++....+++..| .++.++++
T Consensus       396 PeR~l~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~  473 (481)
T 3czh_A          396 PERFLDSSGYF-AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQP-QPYLICAE  473 (481)
T ss_dssp             GGGGBCTTSCB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCC-CCCCBEEE
T ss_pred             CCceeCCCCCC-cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecC-CceEEEEE
Confidence            99999754322 24567999999999999999999999999999999999998765433444445677766 78999999


Q ss_pred             eCC
Q 009612          529 DRN  531 (531)
Q Consensus       529 ~r~  531 (531)
                      ||-
T Consensus       474 ~~~  476 (481)
T 3czh_A          474 RRH  476 (481)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            983


No 7  
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=2.7e-76  Score=598.02  Aligned_cols=453  Identities=24%  Similarity=0.384  Sum_probs=370.8

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcc
Q 009612           63 QRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIK  140 (531)
Q Consensus        63 ~~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~  140 (531)
                      .+++..+|||+++|++||++.+. ++++..+.+|+++|  |+||++++| ++++++++||+.+++|+.+  ..|++++..
T Consensus        12 ~~~lp~~PgP~~~p~~G~~~~~~-~~~~~~~~~l~~~y--G~v~~~~~g-~~~~vvv~~~~~i~~il~~~~~~f~~r~~~   87 (495)
T 2hi4_A           12 PKGLKSPPEPWGWPLLGHVLTLG-KNPHLALSRMSQRY--GDVLQIRIG-STPVLVLSRLDTIRQALVRQGDDFKGRPDL   87 (495)
T ss_dssp             CTTCBCCCCCCCBTTTBTHHHHT-TCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHTTTGGGSCBCCCC
T ss_pred             CCCCCCCCCCCCCcceeeHHhcC-ccHHHHHHHHHHHh--CCEEEEEEC-CccEEEECCHHHHHHHHHhcchhhCCCCCc
Confidence            33456779999999999998876 67899999999999  899999999 8999999999999999985  468777655


Q ss_pred             hhhhhhhcccceecC-CCChhHHHHHHHHhhcc---CChhhh---c---ccccchHHHHHHHHHHHHHhhcCCCccchHH
Q 009612          141 QSAECLMFSRAIGFA-PNGTYWRLLRRIASSHL---FSPRRI---L---SHEPGRQLDCAVMLQNIANEQKHNGFVSLRK  210 (531)
Q Consensus       141 ~~~~~~~~g~~~~~~-~~g~~w~~~Rr~l~~~~---fs~~~l---~---~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~  210 (531)
                      ........+.+++++ .+|+.|+++||.+ .+.   |+..++   +   .+++.+.++++.+++.+.....+++++|+.+
T Consensus        88 ~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~  166 (495)
T 2hi4_A           88 YTSTLITDGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYN  166 (495)
T ss_dssp             HHHHTSTTSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHH
T ss_pred             HHHHHhcCCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHH
Confidence            433323335666655 4799999999999 555   443333   2   6889999999999999987555667899999


Q ss_pred             HHHHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHH
Q 009612          211 HLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRG  290 (531)
Q Consensus       211 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~  290 (531)
                      .+..+++|+++.++||.+++..+  +....+.+.+..............++|++.++  +....++..+..+.+.+++.+
T Consensus       167 ~~~~~~~dvi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l--p~~~~~~~~~~~~~~~~~~~~  242 (495)
T 2hi4_A          167 QVVVSVANVIGAMCFGQHFPESS--DEMLSLVKNTHEFVETASSGNPLDFFPILRYL--PNPALQRFKAFNQRFLWFLQK  242 (495)
T ss_dssp             HHHHHHHHHHHHHHHGGGSCTTC--HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGS--CCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCC--HHHHHHHHHHHHHHHhcccchHHHHhHHHHhc--CchHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999887433  34555555555555444333345678887766  444556677888889999999


Q ss_pred             HHHHHHhhhccCCCCCCccHHHHHHhhhc------CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHH
Q 009612          291 IIEEHRRLKNSTKLGDNADFVDVLLSLEG------EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKL  364 (531)
Q Consensus       291 ~i~~~~~~~~~~~~~~~~d~~~~ll~~~~------~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l  364 (531)
                      .|+++++..+.+   ...|+++.+++...      +..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       243 ~i~~r~~~~~~~---~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl  319 (495)
T 2hi4_A          243 TVQEHYQDFDKN---SVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKI  319 (495)
T ss_dssp             HHHHHHHTCCTT---CCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHhhccc---ccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHH
Confidence            999887653322   45799999986421      125899999999999999999999999999999999999999999


Q ss_pred             HHHHHhh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC
Q 009612          365 HAELQAV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW  441 (531)
Q Consensus       365 ~~Ei~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~  441 (531)
                      |+||+++   ++.++++++++||||+|||+|+||++|+++... +|++++|++++ ||.||||+.|.++.+++||||++|
T Consensus       320 ~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~-~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~  397 (495)
T 2hi4_A          320 QKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTI-PHSTTRDTTLN-GFYIPKKCCVFVNQWQVNHDPELW  397 (495)
T ss_dssp             HHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCS-CEECSSCEEET-TEEECTTCEEEEBHHHHHHCTTTC
T ss_pred             HHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCC-ccccCCCeeEe-CeEECCCCEEEeChHHhhCCcccC
Confidence            9999998   456899999999999999999999999999632 89999999998 999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCcCCC--CCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccc
Q 009612          442 EDPHVFKPERFLEADVDVR--GGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEM  519 (531)
Q Consensus       442 ~dp~~F~P~R~l~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  519 (531)
                      +||++|+||||++++....  ..+..|+|||.|+|.|+|++||++|++++++.|+++|++++.++.+.++....+++..|
T Consensus       398 ~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p  477 (495)
T 2hi4_A          398 EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKH  477 (495)
T ss_dssp             SSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBC
T ss_pred             CCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecC
Confidence            9999999999997543200  12456999999999999999999999999999999999998776544555555777777


Q ss_pred             cCce-eEEEeeCC
Q 009612          520 KNPL-RAVAVDRN  531 (531)
Q Consensus       520 ~~~~-~v~~~~r~  531 (531)
                       .++ .|+++ |.
T Consensus       478 -~~~~~v~~~-R~  488 (495)
T 2hi4_A          478 -ARCEHVQAR-RF  488 (495)
T ss_dssp             -CCCCCBEEE-CC
T ss_pred             -CCcceEEEE-Ec
Confidence             567 88888 73


No 8  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=4.6e-76  Score=593.60  Aligned_cols=446  Identities=20%  Similarity=0.331  Sum_probs=367.2

Q ss_pred             CCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhhh
Q 009612           67 VAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSAE  144 (531)
Q Consensus        67 ~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~~  144 (531)
                      +.||||+++|++||++.+..++++..+.+++++|  |+|+++++| +.++|+|+||+.+++|+.+  ..|++++......
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~~-~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~   86 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERY--GPVFTIHLG-PRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD   86 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH
T ss_pred             CCCCCCCCCcccccHhhcCCcchHHHHHHHHHHh--CCEEEEEEC-CccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh
Confidence            5789999999999999885478899999999999  899999999 8899999999999999963  5677665543333


Q ss_pred             hhhcccceecCCCChhHHHHHHHHhhccCChhhh--cccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          145 CLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRI--LSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       145 ~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      ....|.+++++ +|+.|+++||.+ .+.|++..+  +.+.+.+.++++.+++.+...  +++++|+.+++..+++|+++.
T Consensus        87 ~~~~~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~  162 (476)
T 2fdv_A           87 WVFKGYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGT--GGANIDPTFFLSRTVSNVISS  162 (476)
T ss_dssp             HHHTTCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHH
T ss_pred             hhcCCCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHH
Confidence            33345676555 899999999999 677887766  678899999999999999754  456899999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhccc--ccccchhh-hhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAF--NWSDYLPW-MSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      ++||.+++..+  +...++.+.+...+......  .+...+|+ ++++  + ...++..++.+.+.+++.+.++++++..
T Consensus       163 ~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~  237 (476)
T 2fdv_A          163 IVFGDRFDYKD--KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL--P-GPQQQAFQLLQGLEDFIAKKVEHNQRTL  237 (476)
T ss_dssp             HHHSSCCCTTC--HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTS--C-SHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHcCCcCCCCC--HHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhc--C-cHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999987543  34555666555555432211  12345666 4333  2 3345667778889999999999887653


Q ss_pred             ccCCCCCCccHHHHHHhhhc------CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--
Q 009612          300 NSTKLGDNADFVDVLLSLEG------EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--  371 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~~------~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--  371 (531)
                      +.+   ...|+++.+++..+      +..++++++.+++.++++||+|||+++++|++++|++||++|++||+||+++  
T Consensus       238 ~~~---~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  314 (476)
T 2fdv_A          238 DPN---SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG  314 (476)
T ss_dssp             CTT---SCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred             CCC---CCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhc
Confidence            322   45799999987642      2358999999999999999999999999999999999999999999999998  


Q ss_pred             -cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCC
Q 009612          372 -NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPE  450 (531)
Q Consensus       372 -~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  450 (531)
                       ++.++++++++||||+|||+|+||++|+++... +|++++|++++ ||.||||+.|.++.+++||||++|+||++||||
T Consensus       315 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~-g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~Pe  392 (476)
T 2fdv_A          315 KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSL-ARRVKKDTKFR-DFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQ  392 (476)
T ss_dssp             SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCS-CEECSSCEEET-TEEECTTCEEEECHHHHHTCTTTCSSTTSCCGG
T ss_pred             CCCCCChhhhhcChHHHHHHHHHHHhcCCcccCc-ceeccCCeeEC-CEeeCCCCEEEeehHHhhCChhhcCCccccCch
Confidence             356899999999999999999999999999422 89999999998 999999999999999999999999999999999


Q ss_pred             ccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC-CCccc-cccccccccCceeEEEe
Q 009612          451 RFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP-ADLSE-VLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       451 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~  528 (531)
                      ||++++.... ....++|||.|+|.|+|++||++|++++++.|+++|++++.++.+ .+++. ..+++..| .++.|+++
T Consensus       393 R~l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~  470 (476)
T 2fdv_A          393 HFLNEKGQFK-KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFL  470 (476)
T ss_dssp             GGBCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEE
T ss_pred             hhCCCCCCCC-CCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEE
Confidence            9997543322 345799999999999999999999999999999999999987642 23434 55777777 79999999


Q ss_pred             eCC
Q 009612          529 DRN  531 (531)
Q Consensus       529 ~r~  531 (531)
                      +|+
T Consensus       471 ~R~  473 (476)
T 2fdv_A          471 PRH  473 (476)
T ss_dssp             EC-
T ss_pred             ecc
Confidence            995


No 9  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=2e-77  Score=605.90  Aligned_cols=448  Identities=23%  Similarity=0.374  Sum_probs=352.8

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC---CCCCCCCcchh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS---PHFADRPIKQS  142 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~---~~~~~~~~~~~  142 (531)
                      .+.+|||+++|++||++.+. .+++.++.+|+++|  |+||++++| +.++|+|+||+.+++|+.+   ..|..++....
T Consensus        13 ~~~~PGP~~~PliGn~~~~~-~~~~~~~~~~~~~y--G~i~~~~~g-~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~   88 (485)
T 3nxu_A           13 KLGIPGPTPLPFLGNILSYH-KGFCMFDMECHKKY--GKVWGFYDG-QQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP   88 (485)
T ss_dssp             HHTCCCCCCBTTTBTGGGGG-GCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC
T ss_pred             hCCCCCCCCcCeecCcHHhh-cChHHHHHHHHHHc--CCeEEEEeC-CCCEEEECCHHHHHHHHhccchhhccCCccccc
Confidence            46799999999999999987 67889999999999  899999999 9999999999999999984   34555554332


Q ss_pred             hhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          143 AECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       143 ~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      ..  ..+.+++ ..+|+.|+++||.+ .+.|++++++.+.+.++++++.+++.+.+...+++++|+.+++..+++|+++.
T Consensus        89 ~~--~~~~~l~-~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~  164 (485)
T 3nxu_A           89 VG--FMKSAIS-IAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITS  164 (485)
T ss_dssp             CG--GGGGSTT-TCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHH
T ss_pred             cc--ccccCcc-ccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHH
Confidence            21  2345554 45899999999999 78899999999999999999999999987665678999999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcc---cccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGA---FNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      ++||.+++..++..  ..+.+.+...+.....   ......+|++.++..............+.+.+.+++.++++.+. 
T Consensus       165 ~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (485)
T 3nxu_A          165 TSFGVNIDSLNNPQ--DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED-  241 (485)
T ss_dssp             HHHSCCCCGGGCTT--CHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHcCCccccccCCC--cHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc-
Confidence            99999998765221  2233322222111000   00112234332220000000000122233444444444444322 


Q ss_pred             ccCCCCCCccHHHHHHhhhcC------CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--
Q 009612          300 NSTKLGDNADFVDVLLSLEGE------EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--  371 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~~~------~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--  371 (531)
                         ..+...|+++.+++...+      ..++++|+.+++..+++||+|||+++++|++++|++||++|+|+|+|++++  
T Consensus       242 ---~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  318 (485)
T 3nxu_A          242 ---TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP  318 (485)
T ss_dssp             ---C---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred             ---cCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhc
Confidence               113567999999986542      258999999999999999999999999999999999999999999999998  


Q ss_pred             -cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCC
Q 009612          372 -NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPE  450 (531)
Q Consensus       372 -~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  450 (531)
                       ++.++++++++||||+|||+|+||++|+++.+  +|++++|++++ ||.||||+.|+++.+++||||++|+||++|+||
T Consensus       319 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~i~-g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~Pe  395 (485)
T 3nxu_A          319 NKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRL--ERVCKKDVEIN-GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPE  395 (485)
T ss_dssp             TTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSCE--EEECCSCEEET-TEEECTTCEEEECHHHHHTCTTTCSSTTSCCGG
T ss_pred             cCCCCCHHHHhcChHHHHHHHHHHhcCCCccCc--ceeeCCCeeEC-CEEECCCCEEEEchHHhcCChhhcCCccCcCcc
Confidence             56789999999999999999999999999986  89999999999 999999999999999999999999999999999


Q ss_pred             ccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          451 RFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       451 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      ||++++... ..+..++|||.|+|.|+|++||++|++++++.|+++|+++++++.+.+++...+.++.|++++.|++++|
T Consensus       396 R~l~~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  474 (485)
T 3nxu_A          396 RFSKKNKDN-IDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR  474 (485)
T ss_dssp             GGSHHHHTT-SCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC
T ss_pred             ccCCCcccc-CCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEc
Confidence            999754322 2455799999999999999999999999999999999999987654455445567788989999999999


Q ss_pred             C
Q 009612          531 N  531 (531)
Q Consensus       531 ~  531 (531)
                      +
T Consensus       475 ~  475 (485)
T 3nxu_A          475 D  475 (485)
T ss_dssp             -
T ss_pred             c
Confidence            5


No 10 
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=7e-76  Score=593.36  Aligned_cols=449  Identities=24%  Similarity=0.372  Sum_probs=366.3

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcc
Q 009612           63 QRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIK  140 (531)
Q Consensus        63 ~~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~  140 (531)
                      +++.+.||||+++|++||++.+...+++..+.+|+++|  |+||++++| ++++|+|+||+++++|+.+  ..|++++..
T Consensus         6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~y--G~v~~~~~g-~~~~vvv~~~~~v~~il~~~~~~f~~r~~~   82 (476)
T 3e6i_A            6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRF--GPVFTLYVG-SQRMVVMHGYKAVKEALLDYKDEFSGRGDL   82 (476)
T ss_dssp             ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHHTSTTTTCEECCC
T ss_pred             cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHh--CCEEEEEEC-CccEEEECCHHHHHHHHhcchHhhCCCCCC
Confidence            34467899999999999999986578999999999999  899999999 9999999999999999974  567777665


Q ss_pred             hhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhh--cccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHH
Q 009612          141 QSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRI--LSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALN  218 (531)
Q Consensus       141 ~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  218 (531)
                      ....... +.+++++ +|+.|+++||++ .+.|+...+  ..+++.++++++.+++.+...  .++++|+..++..+++|
T Consensus        83 ~~~~~~~-~~~l~~~-~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~d  157 (476)
T 3e6i_A           83 PAFHAHR-DRGIIFN-NGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKT--QGQPFDPTFLIGCAPCN  157 (476)
T ss_dssp             GGGGGGT-TSSSTTC-CSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHTHHHHH
T ss_pred             chhheec-CCCEEec-CCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh--CCCCcChHHHHHHHHHH
Confidence            5443333 3366544 899999999987 455544333  346688999999999999754  46789999999999999


Q ss_pred             HHHHHHhccccccCCCchhHHHHHHHHHHHHHhhccc--ccccchh-hhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHH
Q 009612          219 NIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAF--NWSDYLP-WMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEH  295 (531)
Q Consensus       219 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  295 (531)
                      +++.++||.+++..+  +....+...+...+......  .+...+| ++.++  + ...++..+..+.+.+++.+.++++
T Consensus       158 vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l--p-~~~~~~~~~~~~~~~~~~~~i~~~  232 (476)
T 3e6i_A          158 VIADILFRKHFDYND--EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL--P-GSHRKVIKNVAEVKEYVSERVKEH  232 (476)
T ss_dssp             HHHHHHHSCCCCTTC--HHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTS--C-SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCC--HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc--C-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998654  45556666666655543221  1223455 44444  2 334567777888999999999988


Q ss_pred             HhhhccCCCCCCccHHHHHHhhhcC------CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 009612          296 RRLKNSTKLGDNADFVDVLLSLEGE------EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQ  369 (531)
Q Consensus       296 ~~~~~~~~~~~~~d~~~~ll~~~~~------~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~  369 (531)
                      ++..+.+   ...|+++.+++...+      ..++++++.+++..+++||+|||+++++|++++|++||++|+++|+||+
T Consensus       233 ~~~~~~~---~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~  309 (476)
T 3e6i_A          233 HQSLDPN---CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEID  309 (476)
T ss_dssp             HHTCCTT---SCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             hhcCCCC---CCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            8764433   356899998875432      2489999999999999999999999999999999999999999999999


Q ss_pred             hh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCC
Q 009612          370 AV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHV  446 (531)
Q Consensus       370 ~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~  446 (531)
                      ++   ++.++++++++||||+|||+|+||++|+++... +|.+++|++++ ||.||||+.|+++.+++||||++|+||++
T Consensus       310 ~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~r~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~  387 (476)
T 3e6i_A          310 RVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNL-PHEATRDTIFR-GYLIPKGTVVVPTLDSVLYDNQEFPDPEK  387 (476)
T ss_dssp             HHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCS-CEECSSCEEET-TEEECTTCEEEECSHHHHTCTTTSSSTTS
T ss_pred             HhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccc-cccCCCCeeEc-CEEeCCCCEEEechHHhhCCcccCCCccc
Confidence            98   567899999999999999999999999999632 89999999998 99999999999999999999999999999


Q ss_pred             CCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCC-CCCCcccc-ccccccccCcee
Q 009612          447 FKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVA-SPADLSEV-LKLSCEMKNPLR  524 (531)
Q Consensus       447 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~  524 (531)
                      |+||||++++... .....|+|||.|+|.|+|++||++|++++++.|+++|++++..+ .++++... .+++..| .++.
T Consensus       388 F~PeR~l~~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~  465 (476)
T 3e6i_A          388 FKPEHFLNENGKF-KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PRYK  465 (476)
T ss_dssp             CCGGGGBCTTSSB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CCCC
T ss_pred             cCchhhcCCCCCc-cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CCeE
Confidence            9999999865432 24567999999999999999999999999999999999998543 34455443 5666666 7999


Q ss_pred             EEEeeCC
Q 009612          525 AVAVDRN  531 (531)
Q Consensus       525 v~~~~r~  531 (531)
                      |+++||+
T Consensus       466 ~~~~~R~  472 (476)
T 3e6i_A          466 LCVIPRS  472 (476)
T ss_dssp             EEEEECC
T ss_pred             EEEEecc
Confidence            9999996


No 11 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=1.2e-75  Score=590.56  Aligned_cols=446  Identities=22%  Similarity=0.386  Sum_probs=361.5

Q ss_pred             CCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhhh
Q 009612           67 VAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSAE  144 (531)
Q Consensus        67 ~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~~  144 (531)
                      +.||||+++|++||++.+..++++..+.+++++|  |+|+++++| ++++|+|+||+.+++|+.+  ..|++++......
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g-~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~   86 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKY--GDVFTVYLG-SRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD   86 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred             CCCcCCCCCCccccHHhccCCcHHHHHHHHHHHh--CCEEEEEEC-CccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence            5789999999999999885478899999999999  899999999 8899999999999999963  5677665433222


Q ss_pred             hhhcccceecCCCChhHHHHHHHHhhccCChh--hhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          145 CLMFSRAIGFAPNGTYWRLLRRIASSHLFSPR--RILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       145 ~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      ....|.+++++ +|+.|+++||.+ .+.|++.  .++.+.+.+.++++.+++.+...  .++++|+.+++..+++|+++.
T Consensus        87 ~~~~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~  162 (476)
T 1po5_A           87 PIFQGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICS  162 (476)
T ss_dssp             SCCSSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHH
T ss_pred             hhcCCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHH
Confidence            22345666555 899999999998 6677766  44678899999999999999764  356899999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhccc--ccccchhh-hhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAF--NWSDYLPW-MSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      ++||.+++..+  +....+.+.+...+......  .....+|+ ++++  +. ..++..+..+.+.+++.+.|+++++..
T Consensus       163 ~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~l--p~-~~~~~~~~~~~~~~~~~~~i~~r~~~~  237 (476)
T 1po5_A          163 IVFGKRFDYKD--PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF--PG-THRQIYRNLQEINTFIGQSVEKHRATL  237 (476)
T ss_dssp             HHHSSCCCTTC--HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTS--SC-SHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHcCCCCCCCC--HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhc--Cc-HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999987543  34444544444443211110  12235665 3333  22 235666778889999999999887653


Q ss_pred             ccCCCCCCccHHHHHHhhhc------CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--
Q 009612          300 NSTKLGDNADFVDVLLSLEG------EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--  371 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~~------~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--  371 (531)
                      +.+   ...|+++.+++...      +..++++++.+++.++++||+|||+++++|++++|++||++|++||+||+++  
T Consensus       238 ~~~---~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  314 (476)
T 1po5_A          238 DPS---NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG  314 (476)
T ss_dssp             CTT---SCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred             CCC---CcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence            322   45799999886432      1247899999999999999999999999999999999999999999999998  


Q ss_pred             -cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCC
Q 009612          372 -NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPE  450 (531)
Q Consensus       372 -~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  450 (531)
                       ++.++++++++||||+|||+|+||++|+++... +|++++|++++ ||.||||+.|+++.+++||||++|+||++|+||
T Consensus       315 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~-g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~Pe  392 (476)
T 1po5_A          315 SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGV-PHTVTKDTQFR-GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG  392 (476)
T ss_dssp             SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCC-CEECSSCEEET-TEEECTTCEEEECHHHHHTCTTTCSSTTSCCGG
T ss_pred             CCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCC-ccccCCCceec-CEecCCCCEEEeehHhHhcCccccCCccccCch
Confidence             456899999999999999999999999999532 89999999998 999999999999999999999999999999999


Q ss_pred             ccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC-CCccc-cccccccccCceeEEEe
Q 009612          451 RFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP-ADLSE-VLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       451 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~  528 (531)
                      ||++++.... ....++|||.|+|.|+|++||++|++++++.|+++|++++.++.+ ..... ..+++..| .++.|+++
T Consensus       393 R~l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~  470 (476)
T 1po5_A          393 HFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFL  470 (476)
T ss_dssp             GGBCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEE
T ss_pred             hhCCCCCCcc-CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEE
Confidence            9997543322 345799999999999999999999999999999999999887642 23333 45677777 89999999


Q ss_pred             eCC
Q 009612          529 DRN  531 (531)
Q Consensus       529 ~r~  531 (531)
                      +|+
T Consensus       471 ~R~  473 (476)
T 1po5_A          471 ARH  473 (476)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            995


No 12 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1.9e-76  Score=600.43  Aligned_cols=438  Identities=22%  Similarity=0.328  Sum_probs=358.6

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcc
Q 009612           63 QRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIK  140 (531)
Q Consensus        63 ~~~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~  140 (531)
                      +++.+.||||++      ++.+..++++..+.+|+++|  |+||++++| ++++|+|+||+++++|+.+  ..|++++..
T Consensus        25 ~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~y--G~v~~~~~g-~~~~vvv~~~~~~~~il~~~~~~f~~r~~~   95 (496)
T 3qz1_A           25 LRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKL--GPVYRLRLG-LQEVVVLNSKRTIEEAMIRKWVDFAGRPQI   95 (496)
T ss_dssp             ----CCCCBCSC------SCTTSSSCHHHHHHHGGGTS--CSEEEECSS-SSCEEEECSTTHHHHTTTTSCSTTCBCCCC
T ss_pred             ccCCCCCcCCcc------ccccCCCcchHHHHHHHHHh--CCEEEEEeC-CcCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence            344679999987      45554578999999999999  899999999 9999999999999999984  568878766


Q ss_pred             hhhhhhhccc-ceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH
Q 009612          141 QSAECLMFSR-AIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNN  219 (531)
Q Consensus       141 ~~~~~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  219 (531)
                      ........|. +++++.+|+.|+++||.+ .+.|+++.++.+.+.++++++.+++.+..  ..++++|+.+++..+++|+
T Consensus        96 ~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dv  172 (496)
T 3qz1_A           96 PSYKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSI  172 (496)
T ss_dssp             TTTTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHH
T ss_pred             chHHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHH
Confidence            5444444454 776664499999999999 67788777788999999999999999976  2567899999999999999


Q ss_pred             HHHHHhccccccCCCchhHHHHHHHHHHHHHhhcc--cccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHh
Q 009612          220 IMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGA--FNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRR  297 (531)
Q Consensus       220 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  297 (531)
                      ++.++||.    .+ ++....+.+.+...+.....  ..+.+.+|+++++  +.+..+++.+..+.+.+++.+.++++++
T Consensus       173 i~~~~fG~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l--p~~~~~~~~~~~~~~~~~~~~~i~~~~~  245 (496)
T 3qz1_A          173 ICYLTFGN----KE-DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFF--PNPGLWRLKQAIENRDHMVEKQLRRHKE  245 (496)
T ss_dssp             TTTTSTTC----CC-HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCC----CC-ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998    11 23445555555554433322  2344567777766  4455677888889999999999999887


Q ss_pred             hhccCCCCCCccHHHHHHhhhcCC-------CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q 009612          298 LKNSTKLGDNADFVDVLLSLEGEE-------KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQA  370 (531)
Q Consensus       298 ~~~~~~~~~~~d~~~~ll~~~~~~-------~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  370 (531)
                      ..+.+   ...|+++.+++...++       .++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|+++
T Consensus       246 ~~~~~---~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~  322 (496)
T 3qz1_A          246 SMVAG---QWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDR  322 (496)
T ss_dssp             SCCSS---CCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             hccCC---CccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            65433   5679999999875432       6899999999999999999999999999999999999999999999999


Q ss_pred             h-c------CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCC
Q 009612          371 V-N------SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWED  443 (531)
Q Consensus       371 ~-~------~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~d  443 (531)
                      + +      +.+ ++++++||||+|||+|+||++|+++... +|++++|++++ ||.||||+.|.++.+++||||++|+|
T Consensus       323 ~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~d  399 (496)
T 3qz1_A          323 ELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLAL-PHRTTRPSSIF-GYDIPEGMVVIPNLQGAHLDETVWEQ  399 (496)
T ss_dssp             HHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCC-CEECSSCEECS-SSEECTTCEEEECHHHHTTCTTTSSS
T ss_pred             HhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCccccc-CccCCCCceEC-CEEeCCCCEEEechHHhhCChhhcCC
Confidence            8 2      345 8999999999999999999999999743 89999999999 99999999999999999999999999


Q ss_pred             CCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC-CCCcccc--cccccccc
Q 009612          444 PHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS-PADLSEV--LKLSCEMK  520 (531)
Q Consensus       444 p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~--~~~~~~~~  520 (531)
                      |++|+||||++++.     ...++|||.|+|.|+|++||++|+++++++|+++|++++.++. ..+++..  .+++..| 
T Consensus       400 p~~F~PeR~l~~~~-----~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~-  473 (496)
T 3qz1_A          400 PHEFRPDRFLEPGA-----NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKV-  473 (496)
T ss_dssp             TTSCCCCCCC---C-----CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCC-
T ss_pred             cccCCcccccCCCC-----CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecC-
Confidence            99999999997541     2279999999999999999999999999999999999988643 2344443  5677777 


Q ss_pred             CceeEEEeeCC
Q 009612          521 NPLRAVAVDRN  531 (531)
Q Consensus       521 ~~~~v~~~~r~  531 (531)
                      .++.|+++||+
T Consensus       474 ~~~~v~~~~R~  484 (496)
T 3qz1_A          474 QPFQVRLQPRG  484 (496)
T ss_dssp             CCCCCCCCCC-
T ss_pred             CceEEEEEEec
Confidence            69999999995


No 13 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=2.6e-75  Score=588.55  Aligned_cols=446  Identities=22%  Similarity=0.345  Sum_probs=354.1

Q ss_pred             CCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhhh
Q 009612           67 VAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSAE  144 (531)
Q Consensus        67 ~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~~  144 (531)
                      +.||||+++|++||++.+..++++..+.+++++|  |+|+++++| +.++|+|+||+.+++|+.+  ..|++++......
T Consensus        11 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g-~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~   87 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVY--GPVFTLYFG-LKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE   87 (477)
T ss_dssp             BCCCCSSSCC-----CCBCHHHHHHHHHHHHHHH--CSEEEEESS-SCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC
T ss_pred             CCCCCCCCCceeccHhhcCCCChHHHHHHHHHHh--CCEEEEEEC-CCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh
Confidence            5789999999999999874357889999999999  899999999 8889999999999999963  5677665432222


Q ss_pred             hhhcccceecCCCChhHHHHHHHHhhccCChh--hhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          145 CLMFSRAIGFAPNGTYWRLLRRIASSHLFSPR--RILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       145 ~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      ....|.+++++ +|+.|+++||.+ .+.|++.  .++.+.+.+.++++.+++.+...  .++++|+.+++..+++|+++.
T Consensus        88 ~~~~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~  163 (477)
T 1r9o_A           88 RANRGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKT--KASPCDPTFILGCAPCNVICS  163 (477)
T ss_dssp             TTTCTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHHHHHHHHHHH
T ss_pred             hccCCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHH
Confidence            22345666555 899999999998 6677776  45678899999999999999754  356899999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcc--cccccchhh-hhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGA--FNWSDYLPW-MSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      ++||.+++..+  +....+.+.+...+.....  ......+|+ ++++  +. ..++..+..+.+.+++.+.|+++++..
T Consensus       164 ~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--p~-~~~~~~~~~~~~~~~~~~~i~~r~~~~  238 (477)
T 1r9o_A          164 IIFHKRFDYKD--QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF--PG-THNKLLKNVAFMKSYILEKVKEHQESM  238 (477)
T ss_dssp             HHHSCCCCTTC--HHHHHHHHHHHHHHHHHTCCBC-------CCCSCC--TT-CHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHccCcCCCCC--HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhc--ch-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999987543  3455555555555432211  122335565 2222  22 225566777888999999999887653


Q ss_pred             ccCCCCCCccHHHHHHhhhc------CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--
Q 009612          300 NSTKLGDNADFVDVLLSLEG------EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--  371 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~~------~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--  371 (531)
                      +.+   ...|+++.+++...      +..++++++.+++.++++||+|||+++++|++++|++||++|++||+||+++  
T Consensus       239 ~~~---~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  315 (477)
T 1r9o_A          239 DMN---NPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG  315 (477)
T ss_dssp             CTT---CCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred             CCC---CchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence            322   45799999886421      2359999999999999999999999999999999999999999999999998  


Q ss_pred             -cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCC
Q 009612          372 -NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPE  450 (531)
Q Consensus       372 -~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  450 (531)
                       ++.++++++++||||+|||+|+||++|+++... +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||
T Consensus       316 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~-g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~Pe  393 (477)
T 1r9o_A          316 RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSL-PHAVTCDIKFR-NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPH  393 (477)
T ss_dssp             SSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCS-CEECSSCEEET-TEEECTTCEEEECSHHHHTCTTTSSSTTSCCGG
T ss_pred             CCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCC-ceeccCCcccc-ceecCCCCEEEEecHHhhCCcccCCCccccCcc
Confidence             457899999999999999999999999999532 89999999998 999999999999999999999999999999999


Q ss_pred             ccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCC-CCccc-cccccccccCceeEEEe
Q 009612          451 RFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASP-ADLSE-VLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       451 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~  528 (531)
                      ||++++.... ....|+|||.|+|.|+|++||++|+++++++|+++|++++.++.+ ..... ..+++..| .++.|+++
T Consensus       394 R~l~~~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~  471 (477)
T 1r9o_A          394 HFLDEGGNFK-KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFI  471 (477)
T ss_dssp             GGBCTTSCBC-CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEE
T ss_pred             ceECCCCCcC-ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEE
Confidence            9997543322 345799999999999999999999999999999999999987542 22333 45677777 89999999


Q ss_pred             eCC
Q 009612          529 DRN  531 (531)
Q Consensus       529 ~r~  531 (531)
                      +|+
T Consensus       472 ~R~  474 (477)
T 1r9o_A          472 PIH  474 (477)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            995


No 14 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=8.1e-75  Score=587.11  Aligned_cols=450  Identities=20%  Similarity=0.236  Sum_probs=362.0

Q ss_pred             CCCCCCCCCCCCCCcccccccccC----CCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCC
Q 009612           62 NQRGSVAIPGPKGVPLFGSLFTLS----RGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFAD  136 (531)
Q Consensus        62 ~~~~~~~~PgP~~~p~iG~~~~~~----~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~  136 (531)
                      ..++++.+|||++.|+. |++.+.    .++++..+.+|++||  |+||++++| +.++|+|+||+++++|+.+ ..|++
T Consensus         4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kY--G~i~~~~~g-~~~~vvv~dp~~~~~il~~~~~f~~   79 (487)
T 3n9y_A            4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKY--GPIYREKLG-NVESVYVIDPEDVALLFKSEGPNPE   79 (487)
T ss_dssp             CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCHHHHHHHHHTCCSSCC
T ss_pred             CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHc--CceeeccCC-CCCEEEEcCHHHHHHHHHhCCCCCC
Confidence            44568899999998876 665542    137888999999999  899999999 8899999999999999985 56777


Q ss_pred             CCcchhhh--hh--hcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhh----cCCCccch
Q 009612          137 RPIKQSAE--CL--MFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQ----KHNGFVSL  208 (531)
Q Consensus       137 ~~~~~~~~--~~--~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~----~~~~~vdl  208 (531)
                      ++......  ..  ..+.++ +..+|+.|+++||.+...+|++++++.+.+.++++++++++.+....    ++++++|+
T Consensus        80 r~~~~~~~~~~~~~~~~~~l-~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~  158 (487)
T 3n9y_A           80 RFLIPPWVAYHQYYQRPIGV-LLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDI  158 (487)
T ss_dssp             CCCCHHHHHHHHHTTCCCCG-GGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECC
T ss_pred             CCCCcHHHHHHHHccccCCC-ccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccH
Confidence            77654321  11  123555 45599999999999944479999999999999999999999997643    23457999


Q ss_pred             HHHHHHHHHHHHHHHHhccccccCCCc--hhHHHHHHHHHHHHHhhcccccccchhh--hhhhcChhhHHHHHHhHhHHH
Q 009612          209 RKHLQLAALNNIMGSVFGVRYDIDRDS--KSLQELTEMVREGFELLGAFNWSDYLPW--MSLFYDPFRIHERCLKLVPRV  284 (531)
Q Consensus       209 ~~~~~~~~~~vi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~l~~~~~~~~~~~~~~~~~  284 (531)
                      .+++..+++|+++.++||.++++.++.  +....+.+.+...+.....   ...+|.  +.++  +....++..+..+.+
T Consensus       159 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~--~~~~~~~~~~~~~~~  233 (487)
T 3n9y_A          159 SDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLF--RTKTWKDHVAAWDVI  233 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHH--CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhc--ccHHHHHHHHHHHHH
Confidence            999999999999999999999876532  2345566666555543322   223342  2333  233344455555566


Q ss_pred             HHHHHHHHHHHHhhhccC--CCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHH
Q 009612          285 KNFVRGIIEEHRRLKNST--KLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQA  362 (531)
Q Consensus       285 ~~~~~~~i~~~~~~~~~~--~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~  362 (531)
                      .+++++.++++.+....+  ......|+++.+++.   ++++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       234 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~---~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~  310 (487)
T 3n9y_A          234 FSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD---SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQD  310 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS---CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhc---CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHH
Confidence            666677766554432211  112457899999863   458999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhh---cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCC
Q 009612          363 KLHAELQAV---NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQ  439 (531)
Q Consensus       363 ~l~~Ei~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~  439 (531)
                      |+|+|++++   ++.++++++++||||+|||+|+||++|+++.+  +|++++|++++ ||.||||+.|+++.+++||||+
T Consensus       311 kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~R~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~  387 (487)
T 3n9y_A          311 MLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTL--QRYLVNDLVLR-DYMIPAKTLVQVAIYALGREPT  387 (487)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEE--EEECSSCEEET-TEEECTTCEEEEEHHHHHTCTT
T ss_pred             HHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCccccc--ceeecCceeeC-CEEECCCCEEEeCcHHhcCCcc
Confidence            999999998   45677999999999999999999999999876  89999999999 9999999999999999999999


Q ss_pred             CCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccc
Q 009612          440 VWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEM  519 (531)
Q Consensus       440 ~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  519 (531)
                      +|+||++|+||||++++..  .....++|||.|+|.|+|++||++|+++++++|+++|+|++.++.  ++....++++.|
T Consensus       388 ~~~dp~~F~PeR~l~~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~p  463 (487)
T 3n9y_A          388 FFFDPENFDPTRWLSKDKN--ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS--DVGTTFNLILMP  463 (487)
T ss_dssp             TSSSTTSCCGGGGTCSCTT--SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC--CCCEEESSSEEE
T ss_pred             cCCCcccCChhhcCCCCCC--CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc--ccccceeeeecC
Confidence            9999999999999985432  235679999999999999999999999999999999999998763  334455688899


Q ss_pred             cCceeEEEeeCC
Q 009612          520 KNPLRAVAVDRN  531 (531)
Q Consensus       520 ~~~~~v~~~~r~  531 (531)
                      ++++.|++++|+
T Consensus       464 ~~~~~~~~~~r~  475 (487)
T 3n9y_A          464 EKPISFTFWPFN  475 (487)
T ss_dssp             SSCCCEEEEEC-
T ss_pred             CCCceeEEEECC
Confidence            999999999995


No 15 
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1.5e-75  Score=587.32  Aligned_cols=438  Identities=15%  Similarity=0.235  Sum_probs=360.6

Q ss_pred             CCCCCCCCCCC-CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcc
Q 009612           64 RGSVAIPGPKG-VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIK  140 (531)
Q Consensus        64 ~~~~~~PgP~~-~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~  140 (531)
                      .+.+.||||++ +|++||++.+. .+++.++.++++||  |+||+++++ +.++|+|+||+++++|+.+  ..|++++..
T Consensus         8 ~g~~~PP~~~~~lP~iG~~~~~~-~~~~~~~~~~~~kY--G~i~~~~~~-~~~~vvv~~~~~i~~il~~~~~~~~~~~~~   83 (461)
T 3ld6_A            8 AGVKSPPYIFSPIPFLGHAIAFG-KSPIEFLENAYEKY--GPVFSFTMV-GKTFTYLLGSDAAALLFNSKNEDLNAEDVY   83 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHH-HCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHHCCTTTEESHHHH
T ss_pred             cCCCCCCCCCCCcCeeeeHHHhh-hCHHHHHHHHHHHh--CCEEEEEEC-CccEEEEeCHHHHHHHHhCCccccCCCcch
Confidence            34567888876 99999999987 68999999999999  899999999 9999999999999999974  456666655


Q ss_pred             hhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          141 QSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       141 ~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      .......+|.++++..+|+.|+++|+.+ .+.|+...++.+.+.+.++++++++.+.    .++.+|+.+.+..++++++
T Consensus        84 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i  158 (461)
T 3ld6_A           84 SRLTTPVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWG----ESGEKNVFEALSELIILTA  158 (461)
T ss_dssp             HHHHHHHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHH
Confidence            5555566788887778999999999999 7889999999999999999998888764    3457899999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhc
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKN  300 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (531)
                      +.++||.+++... .+....+...+.   ....  .....+|.+  +  +.....+..++.+.+.+++.+.|++++... 
T Consensus       159 ~~~~fG~~~~~~~-~~~~~~~~~~~~---~~~~--~~~~~~~~~--~--~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-  227 (461)
T 3ld6_A          159 SHCLHGKEIRSQL-NEKVAQLYADLD---GGFS--HAAWLLPGW--L--PLPSFRRRDRAHREIKDIFYKAIQKRRQSQ-  227 (461)
T ss_dssp             HHHHTCHHHHHTC-CHHHHHHHHHHH---TTSS--HHHHHSCTT--S--CCHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred             HHHHcCcchhhhh-hhhhhhhhhhhh---hhhh--hHHHhhhhh--c--cCcHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            9999999886544 122333222222   1111  111112221  1  233445666778888899999888776542 


Q ss_pred             cCCCCCCccHHHHHHhhhcCC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh----cCC
Q 009612          301 STKLGDNADFVDVLLSLEGEE--KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV----NSK  374 (531)
Q Consensus       301 ~~~~~~~~d~~~~ll~~~~~~--~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~----~~~  374 (531)
                          +..+|+++.++++..++  .++++++++++..+++||+|||+++++|++++|++||++|+++|+|++++    ...
T Consensus       228 ----~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~  303 (461)
T 3ld6_A          228 ----EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPP  303 (461)
T ss_dssp             ----CCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCC
T ss_pred             ----CCCcchhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccc
Confidence                25679999999876543  59999999999999999999999999999999999999999999999998    346


Q ss_pred             CChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcccc
Q 009612          375 ITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLE  454 (531)
Q Consensus       375 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  454 (531)
                      ++.+++++||||+|||+||||++|+++..  .|.+++|++++ ||.||||+.|+++.+++|+||++|+||++|+||||++
T Consensus       304 ~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~  380 (461)
T 3ld6_A          304 LTYDQLKDLNLLDRCIKETLRLRPPIMIM--MRMARTPQTVA-GYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ  380 (461)
T ss_dssp             CCHHHHHTCHHHHHHHHHHHHHSCSCCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGS
T ss_pred             hhHHHHHHHhhhhheeeeccccCCchhcc--ccccccceeeC-CcccCCCCeeeechHhhcCCccccCCccccCccccCC
Confidence            78999999999999999999999999987  89999999999 9999999999999999999999999999999999998


Q ss_pred             CCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          455 ADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       455 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      ++... ..+..|+|||.|+|.|+|++||++|++++++.|+++|+|+++++..+... ..+++. +++++.|++++|+
T Consensus       381 ~~~~~-~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~-~~~~~~-~p~~~~v~~~~Rs  454 (461)
T 3ld6_A          381 DNPAS-GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVN-YTTMIH-TPENPVIRYKRRS  454 (461)
T ss_dssp             CCHHH-HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBC-CSSSSC-CBSSCEEEEEECC
T ss_pred             CCccc-CCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCccc-ccceEE-cCCceEEEEEECC
Confidence            65432 23457999999999999999999999999999999999999876544332 234444 4478899999996


No 16 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=3.1e-73  Score=571.07  Aligned_cols=441  Identities=18%  Similarity=0.221  Sum_probs=354.5

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchhhh-
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQSAE-  144 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~-  144 (531)
                      .+.+|||+++|++||++.+..++++..+.+|+++|  |+||+++++ +.+.|+|+||+.+++|+.+..|.+.+. .... 
T Consensus         2 ~~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~y--G~v~~~~~~-~~~~v~v~~~~~~~~il~~~~f~~~~~-~~~~~   77 (470)
T 2ij2_A            2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADEL--GEIFKFEAP-GRVTRYLSSQRLIKEACDESRFDKNLS-QALKF   77 (470)
T ss_dssp             -CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCHHHHHHHTCTTTEEECCC-HHHHH
T ss_pred             CCCCCCCCCCCccccHHHHhcccchHHHHHHHHHh--CCeEEEecC-CccEEEECCHHHHHHHHhhcCcCcCch-hHHHH
Confidence            46799999999999999986567888999999999  899999999 889999999999999998655533222 1111 


Q ss_pred             -hhhcccceecC-CCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          145 -CLMFSRAIGFA-PNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       145 -~~~~g~~~~~~-~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                       ....+.++++. .+|+.|+++||.+ .+.|++.+++.+.+.+.++++++++.+... ..++++|+.+++..+++|+++.
T Consensus        78 ~~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~  155 (470)
T 2ij2_A           78 VRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGL  155 (470)
T ss_dssp             HHHHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHH
Confidence             11235666555 5899999999999 788999999999999999999999998753 2356899999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      ++||.+++..+. +....+.+.+...+.......  ...|++.++  +....++..+..+.+.+++.+.++++++..   
T Consensus       156 ~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---  227 (470)
T 2ij2_A          156 CGFNYRFNSFYR-DQPHPFITSMVRALDEAMNKL--QRANPDDPA--YDENKRQFQEDIKVMNDLVDKIIADRKASG---  227 (470)
T ss_dssp             HHHSCCCCGGGC-SSCCHHHHHHHHHHHHHHHTC-----CTTSGG--GHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHcCCccccccc-CCCCHHHHHHHHHHHHHHHHH--hhhhhHhhc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence            999999876421 112233344333332211110  011333333  333445566777888899999998877542   


Q ss_pred             CCCCCccHHHHHHhhhcC---CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--cCCCCh
Q 009612          303 KLGDNADFVDVLLSLEGE---EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--NSKITD  377 (531)
Q Consensus       303 ~~~~~~d~~~~ll~~~~~---~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--~~~~~~  377 (531)
                        ....|+++.+++..++   ..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++++  +..+++
T Consensus       228 --~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~  305 (470)
T 2ij2_A          228 --EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY  305 (470)
T ss_dssp             --CCCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSSSCCH
T ss_pred             --cCchhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCH
Confidence              2457999999986532   359999999999999999999999999999999999999999999999998  556899


Q ss_pred             hccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCC-eeeCCCCEEEechhhhhcCCCCC-CCCCCCCCCccccC
Q 009612          378 ADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNG-MLIPANTTAMVNMWAITHDSQVW-EDPHVFKPERFLEA  455 (531)
Q Consensus       378 ~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g-~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~  455 (531)
                      +++++||||+|||+|+||++|+++..  +|.+.+|++++ | |.||||+.|+++.+++||||++| +||++|+|||| ++
T Consensus       306 ~~~~~lpyl~a~i~E~lRl~p~~~~~--~r~~~~d~~~~-g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~  381 (470)
T 2ij2_A          306 KQVKQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLG-GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN  381 (470)
T ss_dssp             HHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEET-TTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS
T ss_pred             HHHhCCHHHHHHHHHHHhcCCCcccc--ceeccCCcccC-CceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC
Confidence            99999999999999999999999986  89999999998 8 99999999999999999999999 99999999999 32


Q ss_pred             CcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          456 DVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       456 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                       .. ......|+|||.|+|.|+|++||++|+++++++|+++|+++ .++ ..++....+++..|. ++.|++++|+
T Consensus       382 -~~-~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~-~~~~~~~~~~~~~p~-~~~v~~~~R~  452 (470)
T 2ij2_A          382 -PS-AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHT-NYELDIKETLTLKPE-GFVVKAKSKK  452 (470)
T ss_dssp             -GG-GSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTT-CCCCCEEESSSEEET-TCEEEEEECC
T ss_pred             -CC-cCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCC-CCccccccceEecCC-CeEEEEEEcc
Confidence             11 11335789999999999999999999999999999999999 322 233444456777786 9999999985


No 17 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=8.1e-73  Score=564.16  Aligned_cols=427  Identities=19%  Similarity=0.243  Sum_probs=347.7

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCC--CCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSP--HFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~--~~~~~~~~~~~  143 (531)
                      .+.||||+++|++||++.+. .+++ .+.+++++|  |+||+++++ +.+.|+|+||+.+++|+.+.  .|+.+  ....
T Consensus        11 ~~~pPgp~~~P~iG~~~~~~-~~~~-~~~~~~~~y--g~v~~~~~~-g~~~vvv~~~~~~~~il~~~~~~~~~~--~~~~   83 (444)
T 2ve3_A           11 LPIPPGDFGLPWLGETLNFL-NDGD-FGKKRQQQF--GPIFKTRLF-GKNVIFISGALANRFLFTKEQETFQAT--WPLS   83 (444)
T ss_dssp             CCCCCCCCCBTTTBTHHHHH-HCTT-HHHHHHHHH--CSSEEEEET-TEEEEEECSHHHHHHHTSSCTTTEEEE--CCHH
T ss_pred             CCCCCCCCCCCccccHHHHh-cCcH-HHHHHHHHc--CCeEEEeeC-CCCEEEEcCHHHHHHHHhCCCcccccc--hhHH
Confidence            67899999999999998876 3456 888999999  899999988 78899999999999999853  34421  1112


Q ss_pred             hhhhccc-ceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 009612          144 ECLMFSR-AIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMG  222 (531)
Q Consensus       144 ~~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  222 (531)
                      ....+|. ++++ .+|+.|+++|+.+ .+.|++.+++.+.+.++++++.+++.+.    .++++|+.+++..+++|+++.
T Consensus        84 ~~~~~g~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~  157 (444)
T 2ve3_A           84 TRILLGPNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWG----KANEVIWYPQLRRMTFDVAAT  157 (444)
T ss_dssp             HHHHHCTTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHH----HSSEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHhCcccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHH
Confidence            2223354 6644 5899999999999 7889999999999999999999999985    246899999999999999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      ++|| +....+     .++.+.+..........  ...+|.        ...++..++.+.+.+++.+.++++++.   +
T Consensus       158 ~~fG-~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~---~  218 (444)
T 2ve3_A          158 LFMG-EKVSQN-----PQLFPWFETYIQGLFSL--PIPLPN--------TLFGKSQRARALLLAELEKIIKARQQQ---P  218 (444)
T ss_dssp             HHTC-HHHHSC-----TTHHHHHHHHHHHHSSC--CCCSTT--------SHHHHHHHHHHHHHHHHHHHHHHHHTS---C
T ss_pred             HHcC-CCcccH-----HHHHHHHHHHHHHHhcC--CccCCC--------cHHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence            9999 333221     22233333322221111  111221        122455667788889999999887754   1


Q ss_pred             CCCCCccHHHHHHhhhcC--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--cCCCChh
Q 009612          303 KLGDNADFVDVLLSLEGE--EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--NSKITDA  378 (531)
Q Consensus       303 ~~~~~~d~~~~ll~~~~~--~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--~~~~~~~  378 (531)
                        ....|+++.+++..++  ..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++++  +..++++
T Consensus       219 --~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  296 (444)
T 2ve3_A          219 --PSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAE  296 (444)
T ss_dssp             --CCCSSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSSCCCHH
T ss_pred             --CCccCHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCChh
Confidence              2567999999987543  358999999999999999999999999999999999999999999999998  4578999


Q ss_pred             ccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcC
Q 009612          379 DVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVD  458 (531)
Q Consensus       379 ~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~  458 (531)
                      ++++||||+|||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++||||||++++..
T Consensus       297 ~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~  373 (444)
T 2ve3_A          297 TLKKMPYLDQVLQEVLRLIPPVGGG--FRELIQDCQFQ-GFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSA  373 (444)
T ss_dssp             HHTTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTT
T ss_pred             hhhcChHHHHHHHHHHhcCCCccCc--cceeCCCeeEC-CEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcc
Confidence            9999999999999999999999986  89999999998 99999999999999999999999999999999999975432


Q ss_pred             CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          459 VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       459 ~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      .......++|||.|+|.|+|++||++|++++++.|+++|++++.++.+.++  ..+.++.|.+++.|++++|+
T Consensus       374 ~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          374 THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLEL--VVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             TTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCE--EESSSEEETTCCEEEEEEC-
T ss_pred             cCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcce--eccccccCCCCceEEEEeCC
Confidence            222445699999999999999999999999999999999999886544333  33567788899999999985


No 18 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=8.4e-73  Score=566.77  Aligned_cols=438  Identities=17%  Similarity=0.280  Sum_probs=367.1

Q ss_pred             CCCCCCCCC-CcccccccccCCCchhHHHHHHHHhcCCC-ceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcch
Q 009612           66 SVAIPGPKG-VPLFGSLFTLSRGLAHRTLAAMAWSRGNT-QLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQ  141 (531)
Q Consensus        66 ~~~~PgP~~-~p~iG~~~~~~~~~~~~~~~~~~~ky~~g-~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~  141 (531)
                      .+.||||++ +|++||++.+. .+++.++.+|+++|  | +||+++++ +.++|+|+||+.+++++.+  ..|++++...
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~-~~~~~~~~~~~~~y--G~~i~~~~~~-~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~   77 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFG-KSPLGFMQECKRQL--KSGIFTINIV-GKRVTIVGDPHEHSRFFLPRNEVLSPREVYS   77 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHH-HCHHHHHHHHHHHH--TCSEEEEEET-TEEEEEECCGGGTHHHHSSCTTTEESTGGGG
T ss_pred             CCCCCCCCCCcchhccHHHHc-cCHHHHHHHHHHHh--CCCeEEEEEC-CEeEEEEeCHHHHHHHHhCChhhccchhhHH
Confidence            468999665 99999999987 68899999999999  6 99999999 8999999999999999984  4566665443


Q ss_pred             hhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHH-HHHHhhcCCCccchHHHHHHHHHHHH
Q 009612          142 SAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQ-NIANEQKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       142 ~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      . ....+|.++++..+++.|+++|+.+ .+.|++.+++.+.+.+.++++++++ .+..   .++++|+.+++..++++++
T Consensus        78 ~-~~~~~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i  152 (450)
T 3gw9_A           78 F-MVPVFGEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTA  152 (450)
T ss_dssp             G-GHHHHCTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHH
T ss_pred             H-HHHHhcCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHH
Confidence            3 2334577777766899999999999 7889999999999999999999998 5532   3457999999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhc
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKN  300 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (531)
                      +.++||.+++...   ...++.+.+.......  .....++|++.++  +.+..++..++.+.+.+++.+.++++++...
T Consensus       153 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l--p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  225 (450)
T 3gw9_A          153 CQCLFGEDLRKRL---DARRFAQLLAKMESSL--IPAAVFLPILLKL--PLPQSARCHEARTELQKILSEIIIARKEEEV  225 (450)
T ss_dssp             HHHHSCHHHHHHS---CHHHHHHHHHHHHHTC--CGGGGTCGGGGGS--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCcchhhhh---hhHHHHHHHHHHHhcc--ccchhcccchhcc--CCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999886543   1344555555443322  2334567888776  4555667778888999999999998876532


Q ss_pred             cCCCCCCccHHHHHHhhhcC--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHh--hCHHHHHHHHHHHHhhcCCCC
Q 009612          301 STKLGDNADFVDVLLSLEGE--EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELV--LNQKVQAKLHAELQAVNSKIT  376 (531)
Q Consensus       301 ~~~~~~~~d~~~~ll~~~~~--~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~--~~P~~~~~l~~Ei~~~~~~~~  376 (531)
                      .. .....|+++.+++...+  ..++++++.+++..+++||+|||+++++|++++|+  .||++|+++|+|+++++..++
T Consensus       226 ~~-~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~~~~~~  304 (450)
T 3gw9_A          226 NK-DSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN  304 (450)
T ss_dssp             HT-SCCCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTCCSSCC
T ss_pred             cc-CCccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhccCCCC
Confidence            21 13578999999987543  35999999999999999999999999999999999  999999999999999977789


Q ss_pred             hhcc-CCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccC
Q 009612          377 DADV-ARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEA  455 (531)
Q Consensus       377 ~~~~-~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  455 (531)
                      .+++ ++||||+|||+||||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+|||+.. 
T Consensus       305 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~~-  380 (450)
T 3gw9_A          305 YNNVMDEMPFAERCARESIRRDPPLLML--MRKVMADVKVG-SYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK-  380 (450)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCS-
T ss_pred             hHHHHHhcHHHHHHHHHHHHhCCchhcc--ccccccccccC-CEEECCCCEEEEChHHhhCChhhcCCccccCCCcCcC-
Confidence            9999 99999999999999999999986  89999999998 9999999999999999999999999999999999321 


Q ss_pred             CcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCcccccccccccc-CceeEEEeeCC
Q 009612          456 DVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMK-NPLRAVAVDRN  531 (531)
Q Consensus       456 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~r~  531 (531)
                            .+..|+|||.|+|.|+|++||++|++++++.|+++|+++++++...... ..+++..|+ .++.|++++|+
T Consensus       381 ------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          381 ------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPD-YHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             ------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEE-TTSSSCEECGGGCEEEEEECC
T ss_pred             ------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCc-cccceecCCCCceEeEeeecC
Confidence                  2457999999999999999999999999999999999999865333332 234667787 79999999996


No 19 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=8e-72  Score=560.17  Aligned_cols=425  Identities=19%  Similarity=0.269  Sum_probs=349.4

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchhhhh-----hhcccceecCCCChhH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQSAEC-----LMFSRAIGFAPNGTYW  161 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~g~~w  161 (531)
                      ..++..+.+|+++|  |+||++++| +.++|+|+||+++++|+.+..+.+++.......     ..+|.++++..+|+.|
T Consensus        10 ~~~~~~~~~~~~ky--G~v~~~~~~-~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w   86 (456)
T 3mdm_A           10 RVLQDVFLDWAKKY--GPVVRVNVF-HKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW   86 (456)
T ss_dssp             CCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred             chHHHHHHHHHHHh--CCeEEEEeC-CCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence            46888999999999  899999999 899999999999999998766666554322211     1235666666689999


Q ss_pred             HHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHH
Q 009612          162 RLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQEL  241 (531)
Q Consensus       162 ~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~  241 (531)
                      +++||.+ .+.|++++++.+.+.++++++.+++.+.....+++++|+.+++..+++|+++.++||.+++..++.  ...+
T Consensus        87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~--~~~~  163 (456)
T 3mdm_A           87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGA--QKPL  163 (456)
T ss_dssp             HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTC--CHHH
T ss_pred             HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhccc--ccHH
Confidence            9999999 789999999999999999999999999877666779999999999999999999999999865421  1233


Q ss_pred             HHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC
Q 009612          242 TEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE  321 (531)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~  321 (531)
                      .+.+..........    ..|++.+++......+...+..+.+.+++.++++++++..+.+. +...|+++.+++.. ++
T Consensus       164 ~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~~d~l~~ll~~~-~~  237 (456)
T 3mdm_A          164 SQAVKLMLEGITAS----RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGE-EVPADILTQILKAE-EG  237 (456)
T ss_dssp             HHHHHHHHHHHHHH----HHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCHHHHHHHHT-SS
T ss_pred             HHHHHHHHHHHHHH----HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchhhHHHHHHHhc-CC
Confidence            33333332221110    01222222111222345566677788888888988877654332 24679999999865 44


Q ss_pred             CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---cCCCChhccCCChhHHHHHHHHhhCCC
Q 009612          322 KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---NSKITDADVARLPYLQAVVKEALRVHP  398 (531)
Q Consensus       322 ~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p  398 (531)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++++   ++.++++++++||||+|||+||||++|
T Consensus       238 ~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p  317 (456)
T 3mdm_A          238 AQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYP  317 (456)
T ss_dssp             CSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999999999999999998   567999999999999999999999999


Q ss_pred             CCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcc
Q 009612          399 PGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPG  478 (531)
Q Consensus       399 ~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G  478 (531)
                      +++..  .|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||++++.   .+...++|||.|+|.|+|
T Consensus       318 ~~~~~--~r~~~~d~~i~-g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~---~~~~~~~pFg~G~r~C~G  391 (456)
T 3mdm_A          318 PAWGT--FRLLEEETLID-GVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP---KPRFTYFPFSLGHRSCIG  391 (456)
T ss_dssp             SSCCE--EEEECSCEEET-TEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC---CCSSSCCTTCCGGGSCTT
T ss_pred             Ccccc--ccccCCceeEC-CEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC---CCCCcccCCCCCCcCCCC
Confidence            99977  89999999999 9999999999999999999999999999999999997542   234579999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          479 KNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       479 ~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      ++||++|++++++.|+++|++++.++.+..+.  .+.++.|++++.|++++|+
T Consensus       392 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~r~  442 (456)
T 3mdm_A          392 QQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQ--EQATLKPLDPVLCTLRPRG  442 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEECTTCCCCEE--ESSSEEESSCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEeCCCCcceee--cceEEecCCCeEEEEEEcC
Confidence            99999999999999999999999876555443  3567889999999999985


No 20 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=2.3e-72  Score=562.78  Aligned_cols=436  Identities=18%  Similarity=0.272  Sum_probs=334.2

Q ss_pred             CCCCC-CCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCcchhh
Q 009612           67 VAIPG-PKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPIKQSA  143 (531)
Q Consensus        67 ~~~Pg-P~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~~~~~  143 (531)
                      +.||| |+++|++||++.+. .+++..+.+++++|  |+||+++++ ++++++|+||+.+++|+.+  ..|++++.....
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~-~~~~~~~~~l~~~y--G~v~~~~~~-~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~   79 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFR-TDPIGLMQRVRDEL--GDVGTFQLA-GKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFM   79 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHT-TCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHHCCTTTEECTTSCGGG
T ss_pred             CCCCCCCCCCCCccCHHHHh-hChHHHHHHHHHHc--CCEEEEEeC-CceEEEECCHHHHHHHHhcCccccCcccchhHH
Confidence            57898 88999999999886 67899999999999  899999999 8899999999999999974  456666544222


Q ss_pred             hhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHH
Q 009612          144 ECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGS  223 (531)
Q Consensus       144 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  223 (531)
                       ...+|.++.  .+|+.|+++|+.+ .+.|++.+++.+.+.+.++++.+++.+.    .++++|+.+++..+++++++.+
T Consensus        80 -~~~~g~~~~--~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~----~~~~vd~~~~~~~~~~~vi~~~  151 (455)
T 2cib_A           80 -TPIFGEGVV--FDASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWG----EAGEIDLLDFFAELTIYTSSAC  151 (455)
T ss_dssp             -HHHHC-----------------------CCHHHHHHHHHHHHHHHHHHHTTCC----SEEEEEHHHHHHHHHHHHHHHH
T ss_pred             -HhhcCCccc--cCcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhC----CCCcEeHHHHHHHHHHHHHHHH
Confidence             223455543  3789999999999 7899999999999999999999998864    2357999999999999999999


Q ss_pred             HhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCC
Q 009612          224 VFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTK  303 (531)
Q Consensus       224 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  303 (531)
                      +||.+++...+    .++.+.+..+....  ..+..++|++     +....++..++...+.+++.+.|+++++..... 
T Consensus       152 ~fG~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-  219 (455)
T 2cib_A          152 LIGKKFRDQLD----GRFAKLYHELERGT--DPLAYVDPYL-----PIESFRRRDEARNGLVALVADIMNGRIANPPTD-  219 (455)
T ss_dssp             HTCHHHHTTCC----HHHHHHHHHHHTTC--CGGGGTCTTC-----SCHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             HcCCCcchhhh----HHHHHHHHHHHhhh--hHHHHhcccC-----CChhHHHHHHHHHHHHHHHHHHHHHHHhcccCC-
Confidence            99999865431    23334443332211  1122234432     222234556677888899999998887643211 


Q ss_pred             CCCCccHHHHHHhhhcCC--C-CCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---cCCCCh
Q 009612          304 LGDNADFVDVLLSLEGEE--K-LSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---NSKITD  377 (531)
Q Consensus       304 ~~~~~d~~~~ll~~~~~~--~-l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~~~~~~  377 (531)
                       ....|+++.+++..+++  . ++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++++   ++.+++
T Consensus       220 -~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  298 (455)
T 2cib_A          220 -KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF  298 (455)
T ss_dssp             ---CCCHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHH
T ss_pred             -CCcccHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCH
Confidence             12349999999875432  3 8999999999999999999999999999999999999999999999998   356889


Q ss_pred             hccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCc
Q 009612          378 ADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADV  457 (531)
Q Consensus       378 ~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~  457 (531)
                      +++++||||+|||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||++++.
T Consensus       299 ~~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~  375 (455)
T 2cib_A          299 HALRQIPQLENVLKETLRLHPPLIIL--MRVAKGEFEVQ-GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ  375 (455)
T ss_dssp             HTTSCCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTC
T ss_pred             HHHhcCHHHHHHHHHHHhcCCccccc--ceeeCCCceEC-CEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCc
Confidence            99999999999999999999999876  89999999998 9999999999999999999999999999999999997542


Q ss_pred             CCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCcc-ccccccccccCceeEEEeeCC
Q 009612          458 DVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLS-EVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       458 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      .....+..++|||.|+|.|+|++||++|++++++.|+++|+++++.+ +.++. ...+++..|..++.|++++|+
T Consensus       376 ~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~~v~~~~R~  449 (455)
T 2cib_A          376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPAAVRYRRRT  449 (455)
T ss_dssp             HHHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC-GGGCCEECSSSSCEECSCCEEEEEEC-
T ss_pred             ccccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC-ccccccccccccccCCCCceEEEEECc
Confidence            21112456999999999999999999999999999999999998742 22331 123556677789999999985


No 21 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=6.9e-72  Score=561.70  Aligned_cols=433  Identities=19%  Similarity=0.282  Sum_probs=329.4

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchhhhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQSAEC  145 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~~  145 (531)
                      ..+||||+++|++||++.+. .+++.++.++++ |  |+|+++++| ++++++|+||+.+++|+.+..|..++.......
T Consensus        22 ~eppPgP~~~P~iG~~~~~~-~~p~~~~~~l~~-y--Gpv~~~~~g-~~~~~vv~~~~~i~~il~~~~~~~~~~~~~~~~   96 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLA-RDPLAFMSQLRD-H--GDVVRIKLG-PKTVYAVTNPELTGALALNPDYHIAGPLWESLE   96 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHH-HCHHHHHHHHGG-G--CSEEEEEET-TEEEEEECSHHHHHHHHHCTTC-----------
T ss_pred             CCCCCCCCCCCcccchHHhc-cCHHHHHHHHHH-h--CCEEEEEeC-CccEEEECCHHHHHHHHhCcCcccccchHHHHH
Confidence            56799999999999999987 688899999987 8  899999999 899999999999999998766644433222222


Q ss_pred             hhcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHH
Q 009612          146 LMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSV  224 (531)
Q Consensus       146 ~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  224 (531)
                      ...| .+++ ..+|+.|+++|+.+ .+.|++.+++.+.+.+.++++.+++.+.    .++++|+...+..+++++++.++
T Consensus        97 ~~~g~~~l~-~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~~  170 (467)
T 3dbg_A           97 GLLGKEGVA-TANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQ----PGKTVDATSESFRVAVRVAARCL  170 (467)
T ss_dssp             --------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCCcc-cCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHHH
Confidence            2345 5664 45999999999999 7889999999999999999999999874    35789999999999999999999


Q ss_pred             hccccccCCCchhHHHHHHHHHHHHHhhcccccccchhh--hhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          225 FGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPW--MSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       225 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      ||.+++.    +....+...+........   ....+|+  +.++  +....++..++.+.+.+++.+.++++++..   
T Consensus       171 ~g~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---  238 (467)
T 3dbg_A          171 LRGQYMD----ERAERLCVALATVFRGMY---RRMVVPLGPLYRL--PLPANRRFNDALADLHLLVDEIIAERRASG---  238 (467)
T ss_dssp             SCSSCCH----HHHHHHHHHHHHHHHC-----------------------------CCHHHHHHHHHHHHHHHTTCC---
T ss_pred             hCCcccc----hhHHHHHHHHHHHHHHHH---HHhccchhhhhhC--CChHhHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence            9998764    224445555555443221   1123332  2233  333445677778889999999998876531   


Q ss_pred             CCCCCccHHHHHHhhhcCC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh--cCCCChh
Q 009612          303 KLGDNADFVDVLLSLEGEE--KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV--NSKITDA  378 (531)
Q Consensus       303 ~~~~~~d~~~~ll~~~~~~--~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~--~~~~~~~  378 (531)
                        +...|+++.+++..+++  .++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++++  ++.++++
T Consensus       239 --~~~~dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~  316 (467)
T 3dbg_A          239 --QKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFE  316 (467)
T ss_dssp             --SSCCSHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCCHH
T ss_pred             --CCchHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCHH
Confidence              25679999999876543  59999999999999999999999999999999999999999999999998  6789999


Q ss_pred             ccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcC
Q 009612          379 DVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVD  458 (531)
Q Consensus       379 ~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~  458 (531)
                      ++++||||+|||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++||||||++++..
T Consensus       317 ~l~~l~yl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~  393 (467)
T 3dbg_A          317 DVRKLRHTGNVIVEAMRLRPAVWVL--TRRAVAESELG-GYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA  393 (467)
T ss_dssp             HHTTCHHHHHHHHHHHHHSCSCCCE--EEECSSCEEET-TEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT
T ss_pred             HHhhCHHHHHHHHHHhhcCCCcccc--ceeeCCCccCC-CEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc
Confidence            9999999999999999999999886  89999999998 99999999999999999999999999999999999975432


Q ss_pred             CCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          459 VRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       459 ~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      . .....++|||.|+|.|+|++||++|++++++.|+++|++++.++.+  .....+++++| .++.++=..|
T Consensus       394 ~-~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~p-~~l~~~~~~~  461 (467)
T 3dbg_A          394 N-VPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN--DAVRVGITLRP-HDLLVRPVAR  461 (467)
T ss_dssp             T-SCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE--EEEEESSSEEE-EECEEEEEEC
T ss_pred             c-CCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC--CccceeeEecC-CCCccchhhh
Confidence            2 2456799999999999999999999999999999999999987643  33455778777 4666554433


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=3.5e-71  Score=556.11  Aligned_cols=437  Identities=15%  Similarity=0.247  Sum_probs=353.6

Q ss_pred             CCCCCCCCC-CCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC--CCCCCCCc
Q 009612           63 QRGSVAIPG-PKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS--PHFADRPI  139 (531)
Q Consensus        63 ~~~~~~~Pg-P~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~--~~~~~~~~  139 (531)
                      .++.+.||| |+++|++||++.+. .+++.++.+++++|  |+||+++++ ++++|+|+|++.+++++.+  ..+.+++.
T Consensus         7 ~~~~~~PPg~P~~lP~iG~l~~~~-~~~~~~~~~~~~~y--G~v~~l~l~-g~~~vvv~~~~~~~~il~~~~~~~~~~~~   82 (461)
T 3i3k_A            7 PAGVKSPPYIFSPIPFLGHAIAFG-KSPIEFLENAYEKY--GPVFSFTMV-GKTFTYLLGSDAAALLFNSKNEDLNAEDV   82 (461)
T ss_dssp             ---CCCCCBCCCSSTTTBTHHHHH-HCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECSHHHHHHHHHCCTTTEESHHH
T ss_pred             CCCCCCCCCCCCCCCccccHHhhc-cCHHHHHHHHHHHh--CCEEEEEec-CceEEEEeChHHHHHHHhccccccccchH
Confidence            345678999 89999999999987 68899999999999  899999999 8999999999999999985  33443333


Q ss_pred             chhhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH
Q 009612          140 KQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNN  219 (531)
Q Consensus       140 ~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  219 (531)
                      ........+|.++.+..+|+.|+++||.+ .+.|++..++.+.+.+.++++++++.+..    ++.+|+.+.+..+++++
T Consensus        83 ~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~  157 (461)
T 3i3k_A           83 YSRLTTPVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE----SGEKNVFEALSELIILT  157 (461)
T ss_dssp             HHHHHHHHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS----EEEEEHHHHHHHHHHHH
T ss_pred             HHHhhhhhcCCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCcCHHHHHHHHHHHH
Confidence            33333445678887777899999999999 67899999999999999999999988743    34689999999999999


Q ss_pred             HHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          220 IMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       220 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      ++.++||.++..... +   .+.+.+........  .....+|.  ++  +....++..+..+.+.+++.+.++++++..
T Consensus       158 ~~~~~~G~~~~~~~~-~---~~~~~~~~~~~~~~--~~~~~~P~--~l--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  227 (461)
T 3i3k_A          158 ASHCLHGKEIRSQLN-E---KVAQLYADLDGGFS--HAAWLLPG--WL--PLPSFRRRDRAHREIKDIFYKAIQKRRQSQ  227 (461)
T ss_dssp             HHHHHTCHHHHHTCC-H---HHHHHHHHHHTTSS--HHHHHSCT--TS--CCHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHccHhhhhHHH-H---HHHHHHHHHHhccc--cchhhccc--cc--CCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999988754331 1   22233322221111  11112231  22  233345667778888999999998876542


Q ss_pred             ccCCCCCCccHHHHHHhhhcCC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-c---C
Q 009612          300 NSTKLGDNADFVDVLLSLEGEE--KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-N---S  373 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~~~~--~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~---~  373 (531)
                           +...|+++.+++...++  .+++++++.++..+++||+|||+.+++|++++|++||++|+++|+|++++ +   .
T Consensus       228 -----~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  302 (461)
T 3i3k_A          228 -----EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP  302 (461)
T ss_dssp             -----CCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCC
T ss_pred             -----cccccHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCC
Confidence                 25679999999876443  49999999999999999999999999999999999999999999999998 2   3


Q ss_pred             CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccc
Q 009612          374 KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFL  453 (531)
Q Consensus       374 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  453 (531)
                      .++.+++++|||++|||+|+||++|+++..  +|.+.+|++++ ||.||||+.|+++.+++|+||++|+||++|+||||+
T Consensus       303 ~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~--~r~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl  379 (461)
T 3i3k_A          303 PLTYDQLKDLNLLDRCIKETLRLRPPIMIM--MRMARTPQTVA-GYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL  379 (461)
T ss_dssp             CCCHHHHHTCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEET-TEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGG
T ss_pred             CCCHHHHhcChHHHHHHHHHHhcCCCcccc--ccccCCCccCC-CEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCC
Confidence            468999999999999999999999999876  89999999998 999999999999999999999999999999999999


Q ss_pred             cCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEe
Q 009612          454 EADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       454 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  528 (531)
                      +++... .....|+|||+|+|.|+|++||.+|++++++.|+++|+++++++..+... ...+...|.+|+.+.=.
T Consensus       380 ~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~  452 (461)
T 3i3k_A          380 QDNPAS-GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVN-YTTMIHTPENPVIRYKR  452 (461)
T ss_dssp             SCCHHH-HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBC-CSSSSCCBSSCEEEEEE
T ss_pred             CCCCCC-CCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcc-cceeecCCCCceEEeec
Confidence            764321 13457999999999999999999999999999999999999887444433 33566778888887643


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=1.6e-67  Score=534.34  Aligned_cols=438  Identities=13%  Similarity=0.179  Sum_probs=325.0

Q ss_pred             CCCCCCCCC-CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCC-CCCCCcchhh
Q 009612           66 SVAIPGPKG-VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPH-FADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~-~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~~  143 (531)
                      .+.||||++ +|++||++.+. .+++.++.+++++|  |+||++++| ++++|+|+||+.+++|+++.. ++.++.....
T Consensus        12 ~~~pPgp~~~~P~iG~~~~~~-~~~~~~~~~~~~ky--G~i~~~~~g-~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~   87 (491)
T 3dax_A           12 TGEPPLENGLIPYLGCALQFG-ANPLEFLRANQRKH--GHVFTCKLM-GKYVHFITNPLSYHKVLCHGKYFDWKKFHFAT   87 (491)
T ss_dssp             TTCCCEEEEEESCTTTTGGGT-CCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCGGGTHHHHSCCTTEESSHHHHHH
T ss_pred             CCCCCcCCCcccchhhHHHHh-hCHHHHHHHHHHhc--CCeEEEEEC-CeEEEEEcChHHHHHHHcCCccCChHHHHHHH
Confidence            568899998 89999999987 67899999999999  899999999 999999999999999998633 3333322222


Q ss_pred             hhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHh---hcCCCccchHHHHHHHHHHHH
Q 009612          144 ECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANE---QKHNGFVSLRKHLQLAALNNI  220 (531)
Q Consensus       144 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~~~vdl~~~~~~~~~~vi  220 (531)
                      ....+|.+++...+|+.|+++|+.+ .+.|+..+++.+.+.+.+++..++++....   ......+|+...+..++++++
T Consensus        88 ~~~~~g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  166 (491)
T 3dax_A           88 SAKAFGHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAG  166 (491)
T ss_dssp             HHHHHTCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHH
T ss_pred             HHHHcCCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHh
Confidence            2223455554244788999999998 567888888888777777777766654322   112346789999999999999


Q ss_pred             HHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhc
Q 009612          221 MGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKN  300 (531)
Q Consensus       221 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  300 (531)
                      +.+.||.+++..+  +....+.+......      .+...+|++.+.. +....++..+..+.+.+.+   ++++.+.  
T Consensus       167 ~~~~fG~~~~~~~--~~~~~~~~~~~~~~------~~~~~~p~l~~~l-p~~~~~~~~~~~~~~~~~~---~~~~~~~--  232 (491)
T 3dax_A          167 YLTIFGRDLTRRD--TQKAHILNNLDNFK------QFDKVFPALVAGL-PIHMFRTAHNAREKLAESL---RHENLQK--  232 (491)
T ss_dssp             HHHHHCBCSTTGG--GHHHHHHHHHHHHH------HHHHHHHHHHTTC-CGGGSHHHHHHHHHHHHHT---SHHHHTT--
T ss_pred             HHHHcCccccccc--chhhhhhHHHHHHH------HHHHHhHHHHHhC-CHhhhhHHHHHHHHHHHHH---HHHHhhc--
Confidence            9999998775432  11111222222111      1123456443321 2222233334333333322   2222221  


Q ss_pred             cCCCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh-c--C---
Q 009612          301 STKLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV-N--S---  373 (531)
Q Consensus       301 ~~~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~-~--~---  373 (531)
                       .  +...|+++.+++..++ +.++++++.++++.+++||+|||+++++|++++|++||++|+|+|+||+++ +  +   
T Consensus       233 -~--~~~~d~l~~ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~  309 (491)
T 3dax_A          233 -R--ESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKV  309 (491)
T ss_dssp             -C--BSCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCC
T ss_pred             -c--cchhHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcccccc
Confidence             1  2467999988875433 358999999999999999999999999999999999999999999999998 2  2   


Q ss_pred             -------CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceee----cCCeeeCCCCEEEechhhhhcCCCCCC
Q 009612          374 -------KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQL----SNGMLIPANTTAMVNMWAITHDSQVWE  442 (531)
Q Consensus       374 -------~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i----~~g~~ip~g~~v~~~~~~~~~d~~~~~  442 (531)
                             .++++++++||||+|||+||||++|+ +..  +|.+.+|+++    + ||.||||+.|+++.+++|+||++|+
T Consensus       310 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~--~R~~~~d~~l~~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~  385 (491)
T 3dax_A          310 SLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLN--IRTAKEDFTLHLEDG-SYNIRKDDIIALYPQLMHLDPEIYP  385 (491)
T ss_dssp             CSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECE--EEEESSSEEEEETTE-EEEECTTCEEEECTHHHHTCTTTSS
T ss_pred             ccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-ccc--eeEecCCeEeecCCC-cEEeCCCCEEEechHhhcCCcccCC
Confidence                   35899999999999999999999985 655  8999999999    5 8999999999999999999999999


Q ss_pred             CCCCCCCCccccCCcCCC--------CCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC--CCCcccc
Q 009612          443 DPHVFKPERFLEADVDVR--------GGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS--PADLSEV  512 (531)
Q Consensus       443 dp~~F~P~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~  512 (531)
                      ||++|+||||++++....        ..+..|+|||.|+|+|+|++||++|+++++|.||++|++++.++.  +++++..
T Consensus       386 dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  465 (491)
T 3dax_A          386 DPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQS  465 (491)
T ss_dssp             STTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGG
T ss_pred             CHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcc
Confidence            999999999996542211        134579999999999999999999999999999999999998763  2344331


Q ss_pred             -ccc-cccccCceeEEEee
Q 009612          513 -LKL-SCEMKNPLRAVAVD  529 (531)
Q Consensus       513 -~~~-~~~~~~~~~v~~~~  529 (531)
                       .+. +..|+.++.|+++.
T Consensus       466 ~~~~~~~~p~~~~~~~~r~  484 (491)
T 3dax_A          466 RAGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             GTBEEECCBSSCCEEEEEE
T ss_pred             cccccccCCCCCceEEEEe
Confidence             343 45777888888765


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=3.4e-67  Score=531.23  Aligned_cols=439  Identities=13%  Similarity=0.177  Sum_probs=345.2

Q ss_pred             CCCCCCCCCCC-CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCC-CCCCCcch
Q 009612           64 RGSVAIPGPKG-VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPH-FADRPIKQ  141 (531)
Q Consensus        64 ~~~~~~PgP~~-~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~  141 (531)
                      +..+.||||++ +|++||++.+. .+++.++.+++++|  |+||+++++ +.++++|+||+.+++|+++.+ +...+...
T Consensus        10 ~~~~~PPgp~~~lPliG~~~~~~-~~p~~~~~~l~~~y--Gpv~~~~lg-~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~   85 (491)
T 3v8d_A           10 RQTGEPPLENGLIPYLGCALQFG-ANPLEFLRANQRKH--GHVFTCKLM-GKYVHFITNPLSYHKVLCHGKYFDWKKFHF   85 (491)
T ss_dssp             CCTTSCCEEEEEESSTTTTGGGT-CCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCGGGHHHHHSCCTTEESSHHHH
T ss_pred             cCCCCCCCCCCCcceeccHHHHh-cCHHHHHHHHHHHc--CCceEEEEC-CEEEEEEcCHHHHHHHHhcCCccchHHHHH
Confidence            33578999998 79999999997 79999999999999  899999999 999999999999999998643 44333333


Q ss_pred             hhhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhc---CCCccchHHHHHHHHHH
Q 009612          142 SAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQK---HNGFVSLRKHLQLAALN  218 (531)
Q Consensus       142 ~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~~~~  218 (531)
                      ......+|.+.....+|+.|+++|+.+ .+.|++..++.+.+.+.+++..+++.+.....   ....+|+.+++..++++
T Consensus        86 ~~~~~~~g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~  164 (491)
T 3v8d_A           86 ALSAKAFGHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE  164 (491)
T ss_dssp             HHHHHHHTCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHH
Confidence            223334555544445899999999988 78899999999999999999998885532221   24568999999999999


Q ss_pred             HHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhh
Q 009612          219 NIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRL  298 (531)
Q Consensus       219 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  298 (531)
                      +++..+||.+++..+  +....+.+.++.+..      +...+|.+.... +....++..++.+++.+++.+.+++++  
T Consensus       165 ~~~~~~fG~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~l~~~~-p~~~~~~~~~a~~~l~~~~~~~~~~~~--  233 (491)
T 3v8d_A          165 AGYLTIFGRDLTRRD--TQKAHILNNLDNFKQ------FDKVFPALVAGL-PIHMFRTAHNAREKLAESLRHENLQKR--  233 (491)
T ss_dssp             HHHHHHHCBCCSCGG--GHHHHHHHHHHHHHH------HHHHHHHHHTTC-CGGGCHHHHHHHHHHHHHTSHHHHTTC--
T ss_pred             HHHHHHcCccccccc--hhhhhhHHHHHHHHH------HHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            999999999876433  233334444433322      222344433221 344445666666776666665544322  


Q ss_pred             hccCCCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---c--
Q 009612          299 KNSTKLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---N--  372 (531)
Q Consensus       299 ~~~~~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~--  372 (531)
                            +...|+++.+++..++ +.+++++++.+++.+++||+|||+++++|++++|++||++|+++|+||+++   +  
T Consensus       234 ------~~~~d~l~~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  307 (491)
T 3v8d_A          234 ------ESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQ  307 (491)
T ss_dssp             ------BSCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTC
T ss_pred             ------ccccHHHHHHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcccc
Confidence                  2457899998876544 359999999999999999999999999999999999999999999999998   1  


Q ss_pred             --------CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceee----cCCeeeCCCCEEEechhhhhcCCCC
Q 009612          373 --------SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQL----SNGMLIPANTTAMVNMWAITHDSQV  440 (531)
Q Consensus       373 --------~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i----~~g~~ip~g~~v~~~~~~~~~d~~~  440 (531)
                              ..++.++++++|||+|||+|+||++|+ +..  +|.+++|+++    + ||.||||+.|+++.+++|+||++
T Consensus       308 ~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~~--~R~~~~d~~~~~~~~-g~~ip~G~~v~~~~~~~~~d~~~  383 (491)
T 3v8d_A          308 KVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLN--IRTAKEDFTLHLEDG-SYNIRKDDIIALYPQLMHLDPEI  383 (491)
T ss_dssp             CCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECE--EEEESSSEEEECSSC-EEEECTTCEEEECTHHHHTCTTT
T ss_pred             ccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Ccc--ceeccCCeeEeecCC-cEEeCCCCEEEecchhhcCCccc
Confidence                    357889999999999999999999984 444  8999999999    7 99999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCcCCC--------CCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC--CCCcc
Q 009612          441 WEDPHVFKPERFLEADVDVR--------GGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS--PADLS  510 (531)
Q Consensus       441 ~~dp~~F~P~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~--~~~~~  510 (531)
                      |+||++|+||||++.+....        ..+..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++.  .+.++
T Consensus       384 ~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  463 (491)
T 3v8d_A          384 YPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLD  463 (491)
T ss_dssp             SSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBC
T ss_pred             CCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCC
Confidence            99999999999997643211        134678999999999999999999999999999999999998763  23333


Q ss_pred             c-ccc-ccccccCceeEEEe
Q 009612          511 E-VLK-LSCEMKNPLRAVAV  528 (531)
Q Consensus       511 ~-~~~-~~~~~~~~~~v~~~  528 (531)
                      . ..+ .++.|+.++.|+++
T Consensus       464 ~~~~~~~~~~p~~~i~v~~~  483 (491)
T 3v8d_A          464 QSRAGLGILPPLNDIEFKYK  483 (491)
T ss_dssp             GGGTBEEECCBSSCCEEEEE
T ss_pred             cccCcCcccCCCCCeEEEEE
Confidence            3 223 35678888888875


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=1.7e-65  Score=519.99  Aligned_cols=440  Identities=15%  Similarity=0.154  Sum_probs=319.8

Q ss_pred             CCCCCCCCC-CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCC--CCCCCcchh
Q 009612           66 SVAIPGPKG-VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPH--FADRPIKQS  142 (531)
Q Consensus        66 ~~~~PgP~~-~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~--~~~~~~~~~  142 (531)
                      .+.||||++ +|++||++.+. .+++.++.+|+++|  |+||++++| ++++|||+||+++++++++..  ++.++....
T Consensus        17 ~~~PPgp~~~~P~iG~~~~~~-~~~~~~~~~l~~kY--G~i~~v~lg-~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~   92 (498)
T 3b6h_A           17 PGEPPLDLGSIPWLGYALDFG-KDAASFLTRMKEKH--GDIFTILVG-GRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIF   92 (498)
T ss_dssp             TTCCCEECCSSTTTBTHHHHH-HCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCGGGHHHHHTCCTTTEECCHHHHH
T ss_pred             CCCCCCCCCCCcchhhHHHhc-cCHHHHHHHHHHHc--CCeEEEEEC-CeeEEEEcCHHHHHHHHhCccccCCchhhHHH
Confidence            568999998 89999999886 57899999999999  899999999 999999999999999998633  444443322


Q ss_pred             hhhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHh-hcCCCccchHHHHHHHHHHHHH
Q 009612          143 AECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANE-QKHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       143 ~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~~~vdl~~~~~~~~~~vi~  221 (531)
                      .....+|.+++ ..+|+.|+   +.+ .+.|+...++.+.+.+.+++...++..... ......+++...+..+++++++
T Consensus        93 ~~~~~~g~~~~-~~~~~~~r---r~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~  167 (498)
T 3b6h_A           93 LMERIFDVQLP-HYSPSDEK---ARM-KLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGY  167 (498)
T ss_dssp             HHHHTSCCCCT-TCCHHHHH---HHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCcc-ccCHHHHH---HHH-HHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHH
Confidence            22233465554 34667664   444 456888888777776666666666654322 1123457899999999999999


Q ss_pred             HHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhcc
Q 009612          222 GSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNS  301 (531)
Q Consensus       222 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (531)
                      .++||.+++..+ ..........+........  .+...+|++.+...+....++..++.+.+.+.+   ++++.+.   
T Consensus       168 ~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---  238 (498)
T 3b6h_A          168 LTLYGIEALPRT-HESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL---SPARLAR---  238 (498)
T ss_dssp             HHHHCBSCSSCC-HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---CHHHHTT---
T ss_pred             HhhcCccccccc-ccchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH---HHHHHhc---
Confidence            999999875432 1111112222222222111  122345644332111112223333333333322   2222221   


Q ss_pred             CCCCCCccHHHHHHhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhh---cC----
Q 009612          302 TKLGDNADFVDVLLSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAV---NS----  373 (531)
Q Consensus       302 ~~~~~~~d~~~~ll~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~---~~----  373 (531)
                      .  +...|+++.+++..+++ .++++++. +++.+++||+|||+++++|++++|++||++|+++|+|++++   ++    
T Consensus       239 ~--~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~  315 (498)
T 3b6h_A          239 R--AHRSKWLESYLLHLEEMGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVS  315 (498)
T ss_dssp             C--BSCCHHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC------
T ss_pred             c--ccHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCC
Confidence            1  24679999998765443 46777777 88889999999999999999999999999999999999998   22    


Q ss_pred             ---CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceee-----cCCeeeCCCCEEEechhh-hhcCCCCCCCC
Q 009612          374 ---KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQL-----SNGMLIPANTTAMVNMWA-ITHDSQVWEDP  444 (531)
Q Consensus       374 ---~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i-----~~g~~ip~g~~v~~~~~~-~~~d~~~~~dp  444 (531)
                         .++.+++++||||+|||+|+||++|+ +..  +|.+.+|+++     + ||.||||+.|+++.++ +|+||++|+||
T Consensus       316 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~--~R~~~~d~~~~~~~g~-g~~ip~Gt~v~~~~~~~~~~d~~~~~~p  391 (498)
T 3b6h_A          316 QTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFI--TREVVVDLAMPMADGR-EFNLRRGDRLLLFPFLSPQRDPEIYTDP  391 (498)
T ss_dssp             ----CCTHHHHSCHHHHHHHHHHHHHHBC-BCE--EEEECSCEEEECTTSC-EEEECTTCEEEECTCCCCCTCTTTSSST
T ss_pred             cccccCHHHHhcCHHHHHHHHHHHhccCC-Ccc--eeeecCCeeeecCCCC-eEEeCCCCEEEeCchHhhcCCccccCCh
Confidence               25999999999999999999999985 555  8999999998     4 8999999999999999 99999999999


Q ss_pred             CCCCCCccccCCcCCC--------CCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC--CCCccc-cc
Q 009612          445 HVFKPERFLEADVDVR--------GGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS--PADLSE-VL  513 (531)
Q Consensus       445 ~~F~P~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~-~~  513 (531)
                      ++|+||||++.+....        ..+..++|||+|+|.|+|++||++|+++++|.|+++|+++++++.  .+..+. ..
T Consensus       392 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  471 (498)
T 3b6h_A          392 EVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRY  471 (498)
T ss_dssp             TSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGT
T ss_pred             hhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCcccc
Confidence            9999999997543211        124579999999999999999999999999999999999998753  233332 12


Q ss_pred             cc-cccccCceeEEEeeC
Q 009612          514 KL-SCEMKNPLRAVAVDR  530 (531)
Q Consensus       514 ~~-~~~~~~~~~v~~~~r  530 (531)
                      +. +..|..++.|++++|
T Consensus       472 ~~~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          472 GFGLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             BSSBCCBSSCCEEEEEEC
T ss_pred             ccccCCCCCCccEEEEec
Confidence            33 456778899999887


No 26 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=1.9e-65  Score=507.81  Aligned_cols=393  Identities=18%  Similarity=0.209  Sum_probs=311.2

Q ss_pred             CCCCCCCCCCccccccc-ccCCCchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLF-TLSRGLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~-~~~~~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~  143 (531)
                      .+.||||+++|++||+. .+. .+++..+.++ ++|  |+|+++++ + +.++|+|+||+.+++|+.+..|++++.....
T Consensus        25 ~~~~PGP~~~p~lG~~~~~~~-~~p~~~~~~l-~~y--Gpv~~~~~~~-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~   99 (436)
T 2cd8_A           25 QQGTTASPPVLDLGALGQDFA-ADPYPTYARL-RAE--GPAHRVRTPE-GDEVWLVVGYDRARAVLADPRFSKDWRNSTT   99 (436)
T ss_dssp             ---------CCBHHHHHHHHH-HCCHHHHHHH-HTT--CSEEEEECSS-CCEEEEECSHHHHHHHHHCTTEECCGGGCSS
T ss_pred             ccCCCCCCccccCCCCCcccc-cChHHHHHHH-HHh--CCeeeeccCC-CCeEEEEcCHHHHHHHHcCCCCccccccccc
Confidence            46799999999999986 343 5788999999 899  89999998 7 7889999999999999987677766532111


Q ss_pred             h----hhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHH
Q 009612          144 E----CLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALN  218 (531)
Q Consensus       144 ~----~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~  218 (531)
                      .    ....+.++++ .+|+.|+++||.+ .+.|++.+++.+.+.+.++++++++.+.+.  .++++|+...+ ..++++
T Consensus       100 ~~~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~~  175 (436)
T 2cd8_A          100 PLTEAEAALNHNMLE-SDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAA--PDGRADLMESLAWPLPIT  175 (436)
T ss_dssp             CCCTTGGGTCCSGGG-CCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTC--TTSCEEHHHHTTTHHHHH
T ss_pred             ccccccccccccccc-cCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCcchHHHHHHHHHHH
Confidence            0    0223456644 5999999999999 789999999999999999999999999742  35689999977 579999


Q ss_pred             HHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhh
Q 009612          219 NIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRL  298 (531)
Q Consensus       219 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  298 (531)
                      +++. +||.+.+      ....+.+....++..    .     +       +    ++..++...+.+++.+.|+++++.
T Consensus       176 vi~~-~~G~~~~------~~~~~~~~~~~~~~~----~-----~-------~----~~~~~~~~~~~~~~~~~i~~r~~~  228 (436)
T 2cd8_A          176 VISE-LLGVPEP------DRAAFRVWTDAFVFP----D-----D-------P----AQAQTAMAEMSGYLSRLIDSKRGQ  228 (436)
T ss_dssp             HHHH-HHTCCGG------GHHHHHHHHHHHHSC----S-----S-------T----THHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHH-HhCCCHH------HHHHHHHHHHHHhcc----C-----C-------H----HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9997 7998753      123344433333210    0     0       1    244566778888899998887652


Q ss_pred             hccCCCCCCccHHHHHHhhhcC--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCC
Q 009612          299 KNSTKLGDNADFVDVLLSLEGE--EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKIT  376 (531)
Q Consensus       299 ~~~~~~~~~~d~~~~ll~~~~~--~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  376 (531)
                             ...|+++.|++..++  ..++++|+.+++..+++||+|||+++++|++++|++||++|+++++|++       
T Consensus       229 -------~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~-------  294 (436)
T 2cd8_A          229 -------DGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT-------  294 (436)
T ss_dssp             -------CCCSHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------
T ss_pred             -------CCCCHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh-------
Confidence                   357899999986543  4699999999999999999999999999999999999999999999864       


Q ss_pred             hhccCCChhHHHHHHHHhhCCCCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccC
Q 009612          377 DADVARLPYLQAVVKEALRVHPPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEA  455 (531)
Q Consensus       377 ~~~~~~lp~l~a~i~EtlRl~p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  455 (531)
                              |++|||+|+||++|+++ ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||-  
T Consensus       295 --------~l~a~i~E~lRl~p~~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--  361 (436)
T 2cd8_A          295 --------LLDGAVEEMLRYEGPVESAT--YRFPVEPVDLD-GTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT--  361 (436)
T ss_dssp             --------GHHHHHHHHHHHHCSBSSCC--CBEESSCEEET-TEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred             --------hHHHHHHHHHHhcCcccCce--eEEeCCCeEEC-CEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC--
Confidence                    89999999999999999 55  89999999999 999999999999999999999999999999999961  


Q ss_pred             CcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEeeCC
Q 009612          456 DVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       456 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                              ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+ .++.+.  .+..+++..+++|+++||+
T Consensus       362 --------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~~~l~v~~~~r~  429 (436)
T 2cd8_A          362 --------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWY--PNPMIRGLKALPIRWRRGR  429 (436)
T ss_dssp             --------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBC--CCTTBCCBSCCEEC-----
T ss_pred             --------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceec--cCcccCCcceeEEEEecCc
Confidence                    2589999999999999999999999999999999 6998643 233332  3455667799999999985


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=1.1e-65  Score=518.61  Aligned_cols=432  Identities=14%  Similarity=0.134  Sum_probs=308.6

Q ss_pred             CCCCCCCCC-CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCC-CCCCCcchhh
Q 009612           66 SVAIPGPKG-VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPH-FADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~-~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~~  143 (531)
                      .+.||||++ +|++||++.+. .+++.++.+++++|  |+||++++| +.++++|+||+.+++|+++.. ++.++.....
T Consensus        17 ~~~pPgp~~~~P~iG~~~~~~-~~~~~~~~~l~~~y--G~v~~~~~g-~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~   92 (475)
T 3b98_A           17 RNEPPLDKGMIPWLGHALEFG-KDAAKFLTRMKEKH--GDIFTVRAA-GLYITVLLDSNCYDAVLSDVASLDQTSYAQVL   92 (475)
T ss_dssp             TTCCCEECCSSTTTBTHHHHH-HCHHHHHHHHHHHH--CSEEEEEET-TEEEEEECCTTTHHHHHTCTTTEESHHHHHHH
T ss_pred             CCCCCCCCCCcchHHhHHHHh-hCHHHHHHHHHHHh--CCeEEEEEC-CceEEEEeCHHHHHHHHcCcccCCchHHHHHH
Confidence            578999998 99999999886 67899999999999  899999999 899999999999999998643 4433322222


Q ss_pred             hhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhh--cCCCccchHHHHHHHHHHHHH
Q 009612          144 ECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQ--KHNGFVSLRKHLQLAALNNIM  221 (531)
Q Consensus       144 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~vdl~~~~~~~~~~vi~  221 (531)
                      ....+|.+++ ..+++.|   |+.+ .+.|++.+++.+.+.+.+++..+++.+....  .....+++...+..+++++++
T Consensus        93 ~~~~~g~~~~-~~~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
T 3b98_A           93 MKRIFNMILP-SHNPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGY  167 (475)
T ss_dssp             HHHTTCCCCT-TCCHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCC-CCChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhh
Confidence            2223455554 3366655   4555 5679999999999988888888887764321  122356788888888888888


Q ss_pred             HHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhcc
Q 009612          222 GSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNS  301 (531)
Q Consensus       222 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (531)
                      ...||.+..  + .+...++.+.+...         ...+|++.+...+....+...+..+.+.+    .+.+...  +.
T Consensus       168 ~~~~g~~~~--~-~~~~~~~~~~~~~~---------~~~~p~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~  229 (475)
T 3b98_A          168 LTVFGAENN--N-SAALTQIYEEFRRF---------DKLLPKLARTTVNKEEKQIASAAREKLWK----WLTPSGL--DR  229 (475)
T ss_dssp             HHHHCCTTS--C-HHHHHHHHHHHHHH---------HHHHHHHHTTCCCHHHHHHHHHHHHHHHH----HHSCTTS--CC
T ss_pred             hheeCCccc--c-chhcHHHHHHHHHH---------HhhhHHHHHHhcChhhhHHHHHHHHHHHH----HHHHHHh--hc
Confidence            778884321  1 11222222222211         12345432210011112222222222222    2211111  11


Q ss_pred             CCCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhcc
Q 009612          302 TKLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADV  380 (531)
Q Consensus       302 ~~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  380 (531)
                      .  +...|+++.+++..++ +.++++++. +++.+++||+|||+++++|++++|++||++|+++|+|++...+.++.+++
T Consensus       230 ~--~~~~d~l~~ll~~~~~~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  306 (475)
T 3b98_A          230 K--PREQSWLGSYVKQLQDEGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHLRLEERQ  306 (475)
T ss_dssp             C--CCTTSHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------
T ss_pred             c--ccccHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhcCCCCCCHHHH
Confidence            1  3567999999876443 357888888 99999999999999999999999999999999999999944456799999


Q ss_pred             CCChhHHHHHHHHhhCCCCCCCCccccccccceee-----cCCeeeCCCCEEEechhh-hhcCCCCCCCCCCCCCCcccc
Q 009612          381 ARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQL-----SNGMLIPANTTAMVNMWA-ITHDSQVWEDPHVFKPERFLE  454 (531)
Q Consensus       381 ~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i-----~~g~~ip~g~~v~~~~~~-~~~d~~~~~dp~~F~P~R~l~  454 (531)
                      ++||||+|||+|+||++|+ +..  +|.+++|+++     + ||.||||+.|+++.++ +||||++|+||++||||||++
T Consensus       307 ~~lpyl~a~i~E~lRl~p~-~~~--~R~~~~d~~l~~~~g~-g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~  382 (475)
T 3b98_A          307 KNTPVFDSVLWETLRLTAA-ALI--TRDVTQDKKICLSNGQ-EYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLN  382 (475)
T ss_dssp             -CCHHHHHHHHHHHHHHEE-ECE--EEEECSCEEEECTTSC-EEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBC
T ss_pred             hcCHHHHHHHHHHHhcCCc-cce--eEEecCCeEeecCCCC-eEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcC
Confidence            9999999999999999986 655  8999999999     6 8999999999999999 999999999999999999997


Q ss_pred             CCcCC--------CCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCC--CCCccc-ccc-ccccccCc
Q 009612          455 ADVDV--------RGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVAS--PADLSE-VLK-LSCEMKNP  522 (531)
Q Consensus       455 ~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~-~~~-~~~~~~~~  522 (531)
                      ++...        ...+..++|||+|+|.|+|++||++|++++++.|+++|+++++++.  .+.++. ..+ .+..|..+
T Consensus       383 ~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  462 (475)
T 3b98_A          383 ADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGD  462 (475)
T ss_dssp             TTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSC
T ss_pred             CCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCC
Confidence            54321        1124579999999999999999999999999999999999998763  223322 123 35678789


Q ss_pred             eeEEEeeCC
Q 009612          523 LRAVAVDRN  531 (531)
Q Consensus       523 ~~v~~~~r~  531 (531)
                      +.|++++|+
T Consensus       463 ~~~~~~~R~  471 (475)
T 3b98_A          463 LEIRYRIRF  471 (475)
T ss_dssp             CEEEEEEC-
T ss_pred             ceEEEEecc
Confidence            999999995


No 28 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=8.3e-64  Score=494.94  Aligned_cols=405  Identities=17%  Similarity=0.205  Sum_probs=325.6

Q ss_pred             CCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcch-hhhhh
Q 009612           68 AIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQ-SAECL  146 (531)
Q Consensus        68 ~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~-~~~~~  146 (531)
                      +||||   |++||+..+. .+++.++.+++++|| +||++++++ +.++|+++|++.++.++....|++++... .....
T Consensus         4 p~Pg~---P~lG~~~~~~-~~p~~~~~~l~~~yg-~pv~~~~~~-g~~~v~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~   77 (417)
T 1izo_A            4 QIPHD---KSLDNSLTLL-KEGYLFIKNRTERYN-SDLFQARLL-GKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKS   77 (417)
T ss_dssp             --CBC---CCTTHHHHHH-HHGGGHHHHHHHHTT-SSEEEEEET-TEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTT
T ss_pred             CCCCC---CccchHHHHh-hCcHHHHHHHHHHhC-CCeEEeecC-CccEEEECCHHHHHHHhcccccccccccccchhhh
Confidence            45554   8999999987 688999999999994 499999988 78899999999998766555565543322 12223


Q ss_pred             hcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHh
Q 009612          147 MFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSVF  225 (531)
Q Consensus       147 ~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  225 (531)
                      .+| .++ +..+|+.|+++|+.+ .+.|++++++.+.+.+.+.++++++.+..    ++++|+.+.+..+++++++.+ |
T Consensus        78 ~~g~~~l-~~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~-~  150 (417)
T 1izo_A           78 LFGVNAI-QGMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEK----ADEVVLFEEAKEILCRVACYW-A  150 (417)
T ss_dssp             TTCTTCG-GGCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH-H
T ss_pred             hccccce-eecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-c
Confidence            445 345 456999999999999 78899999999999999999999998853    568999999999999999998 6


Q ss_pred             ccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCC
Q 009612          226 GVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLG  305 (531)
Q Consensus       226 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  305 (531)
                      |.+++..    ...++.+.+...+.....     ..|          ...+..++.+.+.+++.++|+++++.....   
T Consensus       151 G~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---  208 (417)
T 1izo_A          151 GVPLKET----EVKERADDFIDMVDAFGA-----VGP----------RHWKGRRARPRAEEWIEVMIEDARAGLLKT---  208 (417)
T ss_dssp             TCCCCTT----THHHHHHHHHHHHHHTTC-----CSH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSSCC---
T ss_pred             CCCCCch----HHHHHHHHHHHHHhhccc-----CCc----------cchhHHHHHHHHHHHHHHHHHHHHhhccCC---
Confidence            9887642    244555544444332111     111          113455677788999999999887653222   


Q ss_pred             CCccHHHHHHhhhcCC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCC
Q 009612          306 DNADFVDVLLSLEGEE--KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARL  383 (531)
Q Consensus       306 ~~~d~~~~ll~~~~~~--~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l  383 (531)
                      ...|+++.+++..+++  .++++++..++..++ ||++||+++++|++++|++||++|+++++|              ++
T Consensus       209 ~~~d~l~~ll~~~~~~g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E--------------~~  273 (417)
T 1izo_A          209 TSGTALHEMAFHTQEDGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG--------------NS  273 (417)
T ss_dssp             CTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC--------------CH
T ss_pred             CcCCHHHHHHHhccccCCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc--------------CC
Confidence            4579999999875432  488888777776654 999999999999999999999999999987              46


Q ss_pred             hhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCC
Q 009612          384 PYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGD  463 (531)
Q Consensus       384 p~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~  463 (531)
                      ||++|||+|+||++|+++..  +|.+++|++++ |+.||||+.|+++.+++||||++|+||++||||||++.+.    ..
T Consensus       274 ~~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~-g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~----~~  346 (417)
T 1izo_A          274 REREMFVQEVRRYYPFGPFL--GALVKKDFVWN-NCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREE----NL  346 (417)
T ss_dssp             HHHHHHHHHHHHHSCCCCEE--EEEECSCEEET-TEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCC----CS
T ss_pred             HHHHHHHHHHhhcCCccccc--ceeecCCeeEC-CEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCC----CC
Confidence            89999999999999999986  89999999998 9999999999999999999999999999999999996531    34


Q ss_pred             cccccCCCC----CCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          464 LRLAPFGAG----RRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       464 ~~~~~Fg~G----~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      ..++|||.|    +|.|+|++||++|++++++.|+++|++++.++ +..+. ...++.+|++++.|++++|+
T Consensus       347 ~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~-~~~~~-~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          347 FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ-SLHYS-LARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             SSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSC-CCCCC-SSSSSCCCTTCCEEEEEEEC
T ss_pred             cceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCC-CcCcc-cccCCCCCCCCceEeeeeCC
Confidence            579999999    59999999999999999999999999998764 33332 23567789999999999986


No 29 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=3.1e-65  Score=499.85  Aligned_cols=385  Identities=18%  Similarity=0.231  Sum_probs=309.4

Q ss_pred             CCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchhhhhhhcc
Q 009612           70 PGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQSAECLMFS  149 (531)
Q Consensus        70 PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~~~~~g  149 (531)
                      |++...|++||++.+. .+++..+.+++++|  |+|++ ++| +.++++++||+.+++|+.+..|++++..........|
T Consensus         2 ~~~~~~p~iGnl~~~~-~~p~~~~~~l~~~y--Gpv~~-~~g-~~~~vvv~~~~~i~~il~~~~f~~~~~~~~~~~~~~g   76 (389)
T 1n97_A            2 KRLSLREAWPYLKDLQ-QDPLAVLLAWGRAH--PRLFL-PLP-RFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTG   76 (389)
T ss_dssp             EECCHHHHHHHHHHHH-HCHHHHHHHHHHHC--SEEEE-CCT-TCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHC
T ss_pred             cccccccccccHHHHh-hChHHHHHHHHHHc--CCeeE-ecC-CccEEEECCHHHHHHHHhcCCCCCChhHHHHHHHHhC
Confidence            4567789999999886 57889999999999  89998 898 8899999999999999986577766522212222346


Q ss_pred             cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHhcccc
Q 009612          150 RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRY  229 (531)
Q Consensus       150 ~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~  229 (531)
                      .++++ .+|+.|+++||.+ .+.|++.+++.+.+.+.++++++++.+.     ++++|+.+++..+++|+++.++||.++
T Consensus        77 ~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG~~~  149 (389)
T 1n97_A           77 RGLLT-DWGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFGKPL  149 (389)
T ss_dssp             SSTTT-CCHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             Ccccc-CCcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcCCcc
Confidence            66654 4899999999999 7889999999999999999999999875     468999999999999999999999987


Q ss_pred             ccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCcc
Q 009612          230 DIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNAD  309 (531)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  309 (531)
                      +  +      ++.+.+......... ..   ++.+.++  +....++..++.+.+.+++.+.++++              
T Consensus       150 ~--~------~~~~~~~~~~~~~~~-~~---~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~i~~r--------------  201 (389)
T 1n97_A          150 S--P------SLAEHALKALDRIMA-QT---RSPLALL--DLAAEARFRKDRGALYREAEALIVHP--------------  201 (389)
T ss_dssp             C--H------HHHHHHHHHHHHHHH-HH---HCGGGGG--CHHHHHHHHHHHHHHHHHHGGGTTST--------------
T ss_pred             h--H------HHHHHHHHHHHHHHH-HH---hhHHHhc--CCchhHHHHHHHHHHHHHHHHHHHHH--------------
Confidence            5  1      333333333322210 01   1111222  22223344444555555554444221              


Q ss_pred             HHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHH
Q 009612          310 FVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAV  389 (531)
Q Consensus       310 ~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~  389 (531)
                          ++     ++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+               .||
T Consensus       202 ----ll-----~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~---------------~a~  257 (389)
T 1n97_A          202 ----PL-----SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA---------------LAA  257 (389)
T ss_dssp             ----TG-----GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH---------------HHH
T ss_pred             ----hc-----ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH---------------HHH
Confidence                22     348999999999999999999999999999999999999999999999864               299


Q ss_pred             HHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccC
Q 009612          390 VKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPF  469 (531)
Q Consensus       390 i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~F  469 (531)
                      |+|+||++|+++..  +|.+++|++++ ||.||||+.|.++.+++|||  +|+||++||||||++++   ...+..++||
T Consensus       258 i~E~lRl~p~~~~~--~R~~~~d~~l~-g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~---~~~~~~~~~F  329 (389)
T 1n97_A          258 FQEALRLYPPAWIL--TRRLERPLLLG-EDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER---GTPSGRYFPF  329 (389)
T ss_dssp             HHHHHHHSCSSCCE--EEEESSCEEET-TEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC---CCCBTTBCTT
T ss_pred             HHHHHhcCCCcccc--ceeeCCCceEC-CEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC---CCCCCCccCC
Confidence            99999999999986  89999999998 99999999999999999999  99999999999999741   1234579999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          470 GAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       470 g~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      |.|+|.|+|++||++|++++++.|+++|++++.++.+.    ..+.+.+|.+++.|++++|
T Consensus       330 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~----~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          330 GLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV----LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE----EESSSEEETTCCEECCBC-
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc----cceEEeeeCCCceEEEeec
Confidence            99999999999999999999999999999998765432    4567888988999999987


No 30 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=7.5e-63  Score=485.18  Aligned_cols=384  Identities=17%  Similarity=0.201  Sum_probs=311.9

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEE----c-CCC-ccEEEecCHHHHHHhh-cCCCCCCCC
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFS----L-GGS-TPVVVASDPHTAKEIL-TSPHFADRP  138 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~----l-g~~-~~~vvv~dp~~i~~vl-~~~~~~~~~  138 (531)
                      ...||||+++|+.     +. .+++..+.+| ++|  |+|++++    + + + .++|+|+||+.+++|+ .+..+++++
T Consensus         9 ~~lppgp~~~p~~-----~~-~~p~~~~~~l-~~y--Gpv~~~~~~~~~~~-~~~~~vvv~~~~~i~~vl~~~~~~~~~~   78 (406)
T 1ued_A            9 APLLREPANFQLR-----TN-CDPHEDNFGL-RAH--GPLVRIVGESSTQL-GRDFVWQAHGYEVVRRILGDHEHFTTRP   78 (406)
T ss_dssp             CCEEECCTTTTCE-----ET-TEECHHHHHH-HTT--CSEEEEESHHHHHT-TSSCEEEECSHHHHHHHHHCCSSEECCC
T ss_pred             CCCcccCcccCCC-----CC-CCcHHHHHHH-HHh--CCeeeecccccCCC-CCccEEEEcCHHHHHHHHhhCccccccc
Confidence            4578999999986     33 6889999999 999  8999999    7 7 7 8899999999999999 765665554


Q ss_pred             cchh----hh-hhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH
Q 009612          139 IKQS----AE-CLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ  213 (531)
Q Consensus       139 ~~~~----~~-~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~  213 (531)
                      ....    .. ....+.+++ ..+|+.|+++||.+ .+.|++..++.+.+.++++++++++.+..   .++++|+...+.
T Consensus        79 ~~~~~~~~~~~~~~~~~~l~-~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~  153 (406)
T 1ued_A           79 QFTQSKSGAHVEAQFVGQIS-TYDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEA---EGPSADLQGLFA  153 (406)
T ss_dssp             CC---------CGGGTTCGG-GCCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCTTEEHHHHTH
T ss_pred             cccccccccccccccccccc-cCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHH
Confidence            3211    11 011234554 45999999999999 78899999999999999999999999974   356899999887


Q ss_pred             H-HHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHH
Q 009612          214 L-AALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGII  292 (531)
Q Consensus       214 ~-~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i  292 (531)
                      . +++++++ .+||.+.+      ....+.+.+..++.    ..          .  .   .++..++.+.+.+++.+.+
T Consensus       154 ~~~~~~vi~-~~~G~~~~------~~~~~~~~~~~~~~----~~----------~--~---~~~~~~~~~~~~~~~~~~i  207 (406)
T 1ued_A          154 DPVGAHALC-ELLGIPRD------DQREFVRRIRRNAD----LS----------R--G---LKARAADSAAFNRYLDNLL  207 (406)
T ss_dssp             HHHHHHHHH-HHHTCCHH------HHHHHHHHHHHCC-----------------C--C---HHHHHHHHHHHHHHHHHHH
T ss_pred             HHhHHHHHH-HHcCCCHH------HHHHHHHHHHHHHh----cc----------C--C---HHHHHHHHHHHHHHHHHHH
Confidence            5 9999999 57997642      12233333322211    00          0  0   1345667778889999999


Q ss_pred             HHHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 009612          293 EEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVN  372 (531)
Q Consensus       293 ~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  372 (531)
                      +++++.       ...|+++.+++.. ++.++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++   
T Consensus       208 ~~r~~~-------~~~d~l~~ll~~~-~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---  276 (406)
T 1ued_A          208 ARQRAD-------PDDGLLGMIVRDH-GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE---  276 (406)
T ss_dssp             HHHHHS-------CCSSHHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH---
T ss_pred             HHHHhC-------CCCCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH---
Confidence            887753       3579999999876 44699999999999999999999999999999999999999999999875   


Q ss_pred             CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcc
Q 009612          373 SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERF  452 (531)
Q Consensus       373 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  452 (531)
                                  |++|||+|+||++|+++... +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||
T Consensus       277 ------------~l~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~  342 (406)
T 1ued_A          277 ------------KAERVVNELVRYLSPVQAPN-PRLAIKDVVID-GQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA  342 (406)
T ss_dssp             ------------HHHHHHHHHHHHHCSSCSCS-CEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC
T ss_pred             ------------HHHHHHHHHHhcCCCcccCc-ceecCCCEEEC-CEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC
Confidence                        79999999999999999622 89999999999 99999999999999999999999999999999998


Q ss_pred             ccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEE
Q 009612          453 LEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       453 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      -          ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+. .+++...+.++++ +.++|++
T Consensus       343 ~----------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          343 A----------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPI-EEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             C----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGCCBCCSSSCCB-SCCEEEC
T ss_pred             C----------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCc-ccccccccccccC-CeeeeeC
Confidence            2          2589999999999999999999999999999999 79987531 1222334566778 8888864


No 31 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=1.6e-62  Score=485.38  Aligned_cols=401  Identities=18%  Similarity=0.220  Sum_probs=321.2

Q ss_pred             CCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcch-hhhhh
Q 009612           69 IPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQ-SAECL  146 (531)
Q Consensus        69 ~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~-~~~~~  146 (531)
                      ||||   |++||+..+. .+++.++.+++++|+ |||+++.++ +.+++++++++.++ ++.+ ..|++++... .....
T Consensus         4 pPg~---P~iG~~~~~~-~~p~~~~~~l~~~y~-gpv~~~~~~-g~~~~vv~~~~~~~-~l~~~~~f~~~~~~~~~~~~~   76 (415)
T 3awm_A            4 TPHT---KGPDETLSLL-ADPYRFISRQCQRLG-ANAFESRFL-LKKTNCLKGAKAAE-IFYDTTRFEREGAMPVAIQKT   76 (415)
T ss_dssp             --------CCCCHHHHH-HSTTTHHHHHHHHHT-SSEEEEEET-TEEEEEEESHHHHH-HHTCTTTEECTTCSCHHHHTT
T ss_pred             CCCC---CccchHHHHH-hChHHHHHHHHHHhC-CCeEEEecC-CCcEEEEeCHHHHH-HHhcccccccccccchhhhhh
Confidence            6777   8999999887 578999999999996 799999988 78899999999997 6654 5566554322 12222


Q ss_pred             hcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHh
Q 009612          147 MFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSVF  225 (531)
Q Consensus       147 ~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  225 (531)
                      .+| .++ +..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+..    ++++|+.+.+..+++++++.+ |
T Consensus        77 ~~g~~~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~  149 (415)
T 3awm_A           77 LLGQGGV-QGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-A  149 (415)
T ss_dssp             TSCSSSG-GGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-H
T ss_pred             ccCCcce-eecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-c
Confidence            345 444 456999999999999 88999999999999999999999999964    357999999999999999998 8


Q ss_pred             ccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCC
Q 009612          226 GVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLG  305 (531)
Q Consensus       226 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  305 (531)
                      |.+++..    ...++.+.+.........     ..|          ...+..++.+.+.+++.+.|+++++.....   
T Consensus       150 G~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---  207 (415)
T 3awm_A          150 GVPLPDD----EAGNRAGELRALFDAAGS-----ASP----------RHLWSRLARRRVDAWAKRIIEGIRAGSIGS---  207 (415)
T ss_dssp             TCCCCGG----GHHHHHHHHHHHHHSTTC-----SSH----------HHHHHHHHHHHHHHHHHHHHHHHHHTSSCC---
T ss_pred             CCCCCcc----hHHHHHHHHHHHHHHhcc-----cCc----------hHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---
Confidence            9887542    244454444443332110     011          123456677888999999999887653221   


Q ss_pred             CCccHHHHHHhhhcCC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCC
Q 009612          306 DNADFVDVLLSLEGEE--KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARL  383 (531)
Q Consensus       306 ~~~d~~~~ll~~~~~~--~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l  383 (531)
                      ...|+++.+++..+++  .++++++..++..++ ||++||+++++|++++|++||++|+++++|               +
T Consensus       208 ~~~d~l~~ll~~~~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e---------------~  271 (415)
T 3awm_A          208 GSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ---------------P  271 (415)
T ss_dssp             CTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC---------------T
T ss_pred             CCCCHHHHHHhhhhccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH---------------H
Confidence            4568999999875432  488888887777655 999999999999999999999999999986               5


Q ss_pred             hhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCC
Q 009612          384 PYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGD  463 (531)
Q Consensus       384 p~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~  463 (531)
                      ||++|||+|+||++|+++..  +|.+++|++++ |+.||||+.|+++.+++||||++|+||++||||||++++.    ..
T Consensus       272 ~~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~-G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~----~~  344 (415)
T 3awm_A          272 DYAELFVQEVRRFYPFFPAV--VARASQDFEWE-GMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE----DS  344 (415)
T ss_dssp             THHHHHHHHHHHHSCCSCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCC----CS
T ss_pred             HHHHHHHHHHhhcCCCcccc--ceeecCCeEEC-CEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCC----CC
Confidence            89999999999999999986  89999999998 9999999999999999999999999999999999997532    34


Q ss_pred             cccccCCCC----CCCCcchHHHHHHHHHHHHHHHhhceeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          464 LRLAPFGAG----RRVCPGKNLGLATVSLWVAQLVKVYIWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       464 ~~~~~Fg~G----~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      ..++|||.|    +|.|+|++||++|++++++.|+++|++++.++ +..+. ...++.+|++++.|+++++
T Consensus       345 ~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~~-~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          345 FNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ-DLSID-FARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             SSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSC-CCCBC-TTSSSCCBTTCCEEEEEES
T ss_pred             CCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCC-CCCcC-cCCCccccCCCceEEEEeC
Confidence            579999999    59999999999999999999999999998764 33332 2457788999999999864


No 32 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=6.8e-62  Score=479.19  Aligned_cols=370  Identities=16%  Similarity=0.172  Sum_probs=297.3

Q ss_pred             CCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCC---CCCCCcchhhh
Q 009612           68 AIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPH---FADRPIKQSAE  144 (531)
Q Consensus        68 ~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~---~~~~~~~~~~~  144 (531)
                      .||||+++|++|+...    +++..+.+|+ +|  |+|+++.++.+...++|++++.+++++.+..   +..++......
T Consensus         2 ~pPGp~~~P~~g~~~~----~p~~~~~~l~-~~--Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~   74 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP----EPPAEFAKLR-AT--NPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS   74 (404)
T ss_dssp             ----CCBSSCCCSSTT----SCCTHHHHHH-HH--CSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred             CCCCCCCCCCCCCcCC----CccHHHHHHH-Hh--CCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence            4899999999999764    6788888886 68  8999988742455678999999999998643   23333222111


Q ss_pred             ----hhhcc-cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH
Q 009612          145 ----CLMFS-RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNN  219 (531)
Q Consensus       145 ----~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  219 (531)
                          ....+ .++ +..+|+.|+++||.+ .+.|++.+++.+.+.++++++++++.+......++++|+...+...+.++
T Consensus        75 ~~~~~~~~~~~~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~  152 (404)
T 1jfb_A           75 ASGKQAAKAKPTF-VDMDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSY  152 (404)
T ss_dssp             HHHHHHTTSCCCG-GGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHH
T ss_pred             ccccchhcccCcc-cccCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHH
Confidence                11223 344 445899999999999 78999999999999999999999999987644457899999999999999


Q ss_pred             HHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhh
Q 009612          220 IMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLK  299 (531)
Q Consensus       220 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (531)
                      ++..+||.+++.       .++.......+.   .     ..|          ..++..++.+.+.+++.+.++++++. 
T Consensus       153 i~~~~~G~~~~~-------~~~~~~~~~~~~---~-----~~~----------~~~~~~~~~~~~~~~~~~~i~~r~~~-  206 (404)
T 1jfb_A          153 IIYTLLGVPFND-------LEYLTQQNAIRT---N-----GSS----------TAREASAANQELLDYLAILVEQRLVE-  206 (404)
T ss_dssp             HHHHHHTCCGGG-------HHHHHHHHHHHH---C-----TTS----------CHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             HHHHHcCCCHHH-------HHHHHHHHHHHh---c-----cCc----------chHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence            999999987642       112222111110   0     001          12345566778888999999887653 


Q ss_pred             ccCCCCCCccHHHHHHhhhc-CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChh
Q 009612          300 NSTKLGDNADFVDVLLSLEG-EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDA  378 (531)
Q Consensus       300 ~~~~~~~~~d~~~~ll~~~~-~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  378 (531)
                            ...|+++.+++... ++.++++++.+++..+++||+|||+++++|++++|++||++|+|+|++           
T Consensus       207 ------~~~d~l~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~-----------  269 (404)
T 1jfb_A          207 ------PKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-----------  269 (404)
T ss_dssp             ------CCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-----------
T ss_pred             ------CCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-----------
Confidence                  35799999996543 346999999999999999999999999999999999999999999983           


Q ss_pred             ccCCChhHHHHHHHHhhCCCCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCc
Q 009612          379 DVARLPYLQAVVKEALRVHPPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADV  457 (531)
Q Consensus       379 ~~~~lp~l~a~i~EtlRl~p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~  457 (531)
                          .+|++|||+|+||++|+++ ..  +|++++|++++ ||.||||+.|+++.+++||||++|+||++|+||||+++  
T Consensus       270 ----~~yl~a~i~E~lRl~p~~~~~~--~R~~~~d~~~~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~--  340 (404)
T 1jfb_A          270 ----PSLAPQFVEELCRYHTASALAI--KRTAKEDVMIG-DKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP--  340 (404)
T ss_dssp             ----GGGHHHHHHHHHHHSCSCCSCC--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS--
T ss_pred             ----hHhHHHHHHHHHhhCCCccccc--eeeeCCCeeEC-CEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC--
Confidence                3799999999999999999 45  89999999998 99999999999999999999999999999999999752  


Q ss_pred             CCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC
Q 009612          458 DVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA  504 (531)
Q Consensus       458 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~  504 (531)
                            ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+
T Consensus       341 ------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          341 ------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             ------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             ------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence                  1489999999999999999999999999999999 7998753


No 33 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=6.1e-62  Score=482.42  Aligned_cols=401  Identities=15%  Similarity=0.156  Sum_probs=311.8

Q ss_pred             CCCCCCCCCCcccccccccC---C-CchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcC-CCCCCCCc
Q 009612           66 SVAIPGPKGVPLFGSLFTLS---R-GLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTS-PHFADRPI  139 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~---~-~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~-~~~~~~~~  139 (531)
                      .+.|||     ++|++....   . .+++..+.++++ |  |||+++++ | +.++++|+|++.+++++++ ..|++++.
T Consensus         5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~--gpv~~~~~~g-~~~~vvv~~~~~v~~vl~~~~~fs~r~~   75 (428)
T 1cpt_A            5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-E--QPLAMAHIEG-YDPMWIATKHADVMQIGKQPGLFSNAEG   75 (428)
T ss_dssp             CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-H--CSEEEECCTT-SCCEEEECSHHHHHHHHHCTTTEESSSS
T ss_pred             cccchh-----hhcccCChhhhcccCCccHHHHHHHH-h--CCeeeccccC-CCCeEEEccHHHHHHHHcCchhccCccc
Confidence            567888     889865432   1 357888888876 7  79999998 6 7889999999999999985 45777664


Q ss_pred             -chhh---h-h-h--hcc------cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCc
Q 009612          140 -KQSA---E-C-L--MFS------RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGF  205 (531)
Q Consensus       140 -~~~~---~-~-~--~~g------~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~  205 (531)
                       ....   . . .  ..|      .+++ ..+|+.|+++||.+ .+.|++++++.+.+.++++++.+++.+.+.   +++
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~-~~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~  150 (428)
T 1cpt_A           76 SEILYDQNNEAFMRSISGGCPHVIDSLT-SMDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDF---DGE  150 (428)
T ss_dssp             CSSCCCHHHHHHHHHHTTTSSCSSCCGG-GCCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTS---SSE
T ss_pred             cccCCcccccchhccccccccccccccc-cCChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHh---CCC
Confidence             2211   1 1 1  022      3454 45899999999999 789999999999999999999999999752   357


Q ss_pred             cchHHHH-HHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHH
Q 009612          206 VSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRV  284 (531)
Q Consensus       206 vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~  284 (531)
                      +|+...+ ..+++++|+.+ ||.+++.      ..++.+.....+....  .....+|++..+  +....++..++.+.+
T Consensus       151 ~d~~~~~~~~~~~~vi~~~-fG~~~~~------~~~~~~~~~~~~~~~~--~~~~~~P~l~~~--~~~~~~~~~~~~~~~  219 (428)
T 1cpt_A          151 CDFMTDCALYYPLHVVMTA-LGVPEDD------EPLMLKLTQDFFGVHE--PDEQAVAAPRQS--ADEAARRFHETIATF  219 (428)
T ss_dssp             EEHHHHTTTTHHHHHHHHH-HTCCGGG------HHHHHHHHHTTTCC--------------------CHHHHHHHHHHHH
T ss_pred             eehHHHHHhhhHHHHHHHH-cCCCHhH------HHHHHHHHHHHHhccc--cccccccccccc--chhhHHHHHHHHHHH
Confidence            9998654 57999999999 9987642      2233333332221111  111234444332  112234566777888


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHH
Q 009612          285 KNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAK  363 (531)
Q Consensus       285 ~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~  363 (531)
                      .+++.+.|+++++.       ...|+++.+++...++ .++++++.+++..+++||+|||+++++|++++|++||++|+|
T Consensus       220 ~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~  292 (428)
T 1cpt_A          220 YDYFNGFTVDRRSC-------PKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLAL  292 (428)
T ss_dssp             HHHHHHHHHHHTTS-------CCSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHHHHHHHHHHcC-------CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            99999999887652       3579999999875443 599999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCC
Q 009612          364 LHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWED  443 (531)
Q Consensus       364 l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~d  443 (531)
                      +++|++               |++|||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+|
T Consensus       293 l~~E~~---------------~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~d  354 (428)
T 1cpt_A          293 AKSDPA---------------LIPRLVDEAVRWTAPVKSF--MRTALADTEVR-GQNIKRGDRIMLSYPSANRDEEVFSN  354 (428)
T ss_dssp             HHHCGG---------------GHHHHHHHHHHHHCCBCCC--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTCSS
T ss_pred             HHHhHH---------------HHHHHHHHHHHhCCccccc--ceeeCCCeeEC-CEEECCCCEEEeCHHHhCCChhhCCC
Confidence            999975               8999999999999999976  89999999998 99999999999999999999999999


Q ss_pred             CCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhce-eeeCCCCCCCccccccccccccCc
Q 009612          444 PHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNP  522 (531)
Q Consensus       444 p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~  522 (531)
                      |++|+||||..          .++|||.|+|.|+|++||++|+++++++|+++|+ +++.++  ..+  ..+.......+
T Consensus       355 P~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~--~~~~~~~~~~~  420 (428)
T 1cpt_A          355 PDEFDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGP--PRL--VATNFVGGPKN  420 (428)
T ss_dssp             TTSCCTTCCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSC--CEE--CCCSSBCSEEE
T ss_pred             hhhcCCCCCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCC--ccc--ccCccccCcce
Confidence            99999999941          3899999999999999999999999999999997 787642  222  22233345588


Q ss_pred             eeEEEeeC
Q 009612          523 LRAVAVDR  530 (531)
Q Consensus       523 ~~v~~~~r  530 (531)
                      ++|+++||
T Consensus       421 lpv~~~p~  428 (428)
T 1cpt_A          421 VPIRFTKA  428 (428)
T ss_dssp             CEEEEEEC
T ss_pred             eeEEeeCC
Confidence            99999986


No 34 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=6.7e-62  Score=479.53  Aligned_cols=385  Identities=18%  Similarity=0.204  Sum_probs=307.5

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAE  144 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~  144 (531)
                      +..+|||+.          . .+++..+.++++ |  |||   +++ +.++++|+|++.+++|+.+ ..|++++... ..
T Consensus        18 l~~~PGp~~----------~-~~p~~~~~~l~~-~--gpv---~~~-~~~~~vv~~~~~v~~vl~~~~~f~~~~~~~-~~   78 (411)
T 2jjn_A           18 IDEVPGMAD----------E-TALLDWLGTMRE-K--QPV---WQD-RYGVWHVFRHADVQTVLRDTATFSSDPTRV-IE   78 (411)
T ss_dssp             CCSCCCSSC----------H-HHHHHHHHHHHH-H--CSE---EEC-TTSCEEECSHHHHHHHHHCTTTEESCGGGG-ST
T ss_pred             CCCCCCccc----------c-cChHHHHHHHHH-h--CCc---ccC-CCCeEEECCHHHHHHHHcCcccccCccccc-CC
Confidence            888999872          1 468888999976 8  888   567 6778999999999999986 4577765422 11


Q ss_pred             hh-hcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHH
Q 009612          145 CL-MFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMG  222 (531)
Q Consensus       145 ~~-~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~  222 (531)
                      .. ..+.+++ ..+|+.|+++||.+ .+.|++..++.+.+.++++++++++.      .++++|+...+ ..+++++++.
T Consensus        79 ~~~~~~~~~~-~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~------~~~~~d~~~~~~~~~~~~vi~~  150 (411)
T 2jjn_A           79 GASPTPGMIH-EIDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD------AGESFDLVDVLAFPLPVTIVAE  150 (411)
T ss_dssp             TCCCCTTCGG-GCCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT------SCSEEEHHHHTTTHHHHHHHHH
T ss_pred             cccccccccc-cCCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHHHHHHHHH
Confidence            11 2234554 44899999999999 78899999999999999999999987      24579999554 6899999999


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      + ||.+.+..+   ...++   ...++.....    .++        +....++..++.+.+.+++.+.|+++++.    
T Consensus       151 ~-fG~~~~~~~---~~~~~---~~~~~~~~~~----~~~--------~p~~~~~~~~~~~~~~~~~~~~i~~r~~~----  207 (411)
T 2jjn_A          151 L-LGLPPMDHE---QFGDW---SGALVDIQMD----DPT--------DPALAERIADVLNPLTAYLKARCAERRAD----  207 (411)
T ss_dssp             H-HTCCSCCCS---TTCCH---HHHHHHSCCS----CTT--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHS----
T ss_pred             H-cCCCHHHHH---HHHHH---HHHHHhccCc----ccc--------chHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence            8 998875432   22222   2222221110    011        01223456677788899999999887762    


Q ss_pred             CCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccC
Q 009612          303 KLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVA  381 (531)
Q Consensus       303 ~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~  381 (531)
                         ...|+++.+++...+ +.++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++            
T Consensus       208 ---~~~d~l~~ll~~~~~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------  272 (411)
T 2jjn_A          208 ---PGDDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG------------  272 (411)
T ss_dssp             ---CCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG------------
T ss_pred             ---CCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------
Confidence               457999999987543 3699999999999999999999999999999999999999999999976            


Q ss_pred             CChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCC
Q 009612          382 RLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRG  461 (531)
Q Consensus       382 ~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~  461 (531)
                         |++|||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.+       
T Consensus       273 ---~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-------  339 (411)
T 2jjn_A          273 ---RIPAIVEEVLRYRPPFPQM--QRTTTKATEVA-GVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG-------  339 (411)
T ss_dssp             ---GHHHHHHHHHHHSCSSCEE--EEEESSCEEET-TEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS-------
T ss_pred             ---hHHHHHHHHhhhCCCcCCc--ceEECCCeEEC-CEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC-------
Confidence               8999999999999999975  89999999999 9999999999999999999999999999999999852       


Q ss_pred             CCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhce-eeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          462 GDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       462 ~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                       ...++|||.|+|.|+|++||++|++++++.|+++|+ +++.++  ..++...+......++++|+++||.
T Consensus       340 -~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~lpv~~~~~~  407 (411)
T 2jjn_A          340 -GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRD--DERLRHFEQIVLGTRHLPVLAGSSP  407 (411)
T ss_dssp             -SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCS--SCCCCBCCSSSSSBSCCEEECSCCT
T ss_pred             -CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCC--CceeccccccccCcceeEEEecCCC
Confidence             125899999999999999999999999999999995 999742  2332123445556789999998873


No 35 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=2.1e-61  Score=474.36  Aligned_cols=373  Identities=17%  Similarity=0.162  Sum_probs=306.8

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCCc--c-hh---hhhhhcccceecCCCCh
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRPI--K-QS---AECLMFSRAIGFAPNGT  159 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~~--~-~~---~~~~~~g~~~~~~~~g~  159 (531)
                      .+++..+.++ ++|  |+|+++++ | +.++++|+|++.+++|+.+..|++++.  . ..   ......+.+++ ..+|+
T Consensus        19 ~~p~~~~~~l-~~y--Gpv~~~~~~g-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~   93 (403)
T 3aba_A           19 FLPPDGIADI-RAA--APVTRATFTS-GHEAWLVTGYEEVRALLRDSSFSVQVPHALHTQDGVVTQKPGRGSLL-WQDEP   93 (403)
T ss_dssp             TSCCTTHHHH-HHH--CSEEEEECTT-SCEEEEECCHHHHHHHHHCTTEESCCSCCTTSSSCCCCCCCCTTCCT-TCCTT
T ss_pred             cChhHHHHHH-Hhc--CCeeeeccCC-CceEEEEcCHHHHHHHHcCCCcccccccccccccccccccccccccc-cCCch
Confidence            5788888999 899  89999997 7 889999999999999998766766642  1 11   11111345554 45999


Q ss_pred             hHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHHHHHHHHHHhccccccCCCchhH
Q 009612          160 YWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAALNNIMGSVFGVRYDIDRDSKSL  238 (531)
Q Consensus       160 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~  238 (531)
                      .|+++||.+ .+.|++..++.+.+.+.++++++++++.+   .++++|+...+. .+++++++. +||.+.+.      .
T Consensus        94 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~  162 (403)
T 3aba_A           94 EHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVER------R  162 (403)
T ss_dssp             HHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG------H
T ss_pred             hHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH------H
Confidence            999999999 77899999999999999999999999975   256899987664 799999997 79987642      2


Q ss_pred             HHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhh
Q 009612          239 QELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLE  318 (531)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~  318 (531)
                      ..+......++..   .     .|       +    ++..++.+.+.+++.+.|+++++.       ...|+++.++++.
T Consensus       163 ~~~~~~~~~~~~~---~-----~~-------p----~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~  216 (403)
T 3aba_A          163 AEFQDIAEAMMRV---D-----QD-------A----AATEAAGMRLGGLLYQLVQERRAN-------PGDDLISALITTE  216 (403)
T ss_dssp             HHHHHHHHHHSBS---S-----SC-------H----HHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSC
T ss_pred             HHHHHHHHHHHhc---c-----Cc-------H----HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhc
Confidence            2333333322210   0     00       1    445567778889999999887753       3468999999876


Q ss_pred             cCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCC
Q 009612          319 GEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVH  397 (531)
Q Consensus       319 ~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~  397 (531)
                      +++ .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||++
T Consensus       217 ~~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~  281 (403)
T 3aba_A          217 DPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS---------------LVGNAVEELLRYL  281 (403)
T ss_dssp             CTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------GHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------HHHHHHHHHHhcC
Confidence            543 699999999999999999999999999999999999999999999864               8999999999999


Q ss_pred             CCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCC
Q 009612          398 PPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVC  476 (531)
Q Consensus       398 p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C  476 (531)
                      |+++ ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|
T Consensus       282 p~~~~~~--~R~~~~d~~~~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C  348 (403)
T 3aba_A          282 TIGQFGG--ERVATRDVELG-GVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------APHLAFGFGAHQC  348 (403)
T ss_dssp             CSCTTCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------CCCSTTCCGGGSC
T ss_pred             CCccccc--ceEeCCCeEEC-CEEECCCCEEEechhhhCCChhhCCCccccCCCCCC----------CCccCCCCCCccC
Confidence            9999 55  89999999999 999999999999999999999999999999999983          2589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEeeCC
Q 009612          477 PGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       477 ~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +|++||++|++++++.|+++| ++++.++ .++.+  ..+...++.+.++|++++|+
T Consensus       349 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~--~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          349 IGQQLARIELQIVFETLFRRLPGLRLAKPVEELRF--RHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCB--CTTBSSCCBSCCEEECCCCC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCCceecCCcccccc--ccCcccCCcceeEEEecCCC
Confidence            999999999999999999999 6898764 22333  33456677899999999985


No 36 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=8.9e-61  Score=471.37  Aligned_cols=389  Identities=18%  Similarity=0.220  Sum_probs=308.6

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCCcchhhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRPIKQSAE  144 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~  144 (531)
                      ...+|||+++|.+.....+. .+++..+.+| ++| ||+|+++++ + +.++++|+|++.+++|+.+..+++++....+.
T Consensus         4 ~~~~~~~~~~P~~~~~~~~~-~~p~~~~~~l-~~~-yGpv~~~~~~g-~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~   79 (412)
T 2zbx_A            4 TATTPQTTDAPAFPSNRSCP-YQLPDGYAQL-RDT-PGPLHRVTLYD-GRQAWVVTKHEAARKLLGDPRLSSNRTDDNFP   79 (412)
T ss_dssp             ----CCCCSSCBSSCCCSST-TSCCHHHHHH-HHS-SSSEEEEECTT-SCEEEEECSHHHHHHHHTCTTEECCTTSTTSC
T ss_pred             CCCCCCCCCCCCCCCCchhc-cChHHHHHHH-Hhc-CCCeEeeccCC-CCcEEEEecHHHHHHHHcCcccccCccccccc
Confidence            46788888888663333444 6889999999 565 279999997 7 88999999999999999875555544311111


Q ss_pred             hh------h--cccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHH-H
Q 009612          145 CL------M--FSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQL-A  215 (531)
Q Consensus       145 ~~------~--~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~  215 (531)
                      ..      .  .+.+++ ..+|+.|+++||.+ .+.|++.+++.+.+.+.++++++++++..   .++++|+...+.. +
T Consensus        80 ~~~~~~~~~~~~~~~l~-~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~  154 (412)
T 2zbx_A           80 ATSPRFEAVRESPQAFI-GLDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLA---AGPTADLVSQFALPV  154 (412)
T ss_dssp             CCSGGGC----CCCCGG-GCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHH
T ss_pred             ccccccccccccccccc-cCCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHH
Confidence            00      1  234554 45999999999999 78899999999999999999999999974   2568999998874 8


Q ss_pred             HHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHH
Q 009612          216 ALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEH  295 (531)
Q Consensus       216 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  295 (531)
                      ++++++. +||.+.+.      ...+...+..++...                 . .  ++..++.+.+.+++.+.|+++
T Consensus       155 ~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~-----------------~-~--~~~~~~~~~~~~~~~~~i~~r  207 (412)
T 2zbx_A          155 PSMVICR-LLGVPYAD------HEFFQDASKRLVQST-----------------D-A--QSALTARNDLAGYLDGLITQF  207 (412)
T ss_dssp             HHHHHHH-HHTCCGGG------HHHHHHHHHHHHHCS-----------------S-H--HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HcCCCHHH------HHHHHHHHHHHhccC-----------------c-H--HHHHHHHHHHHHHHHHHHHHH
Confidence            9999996 79987642      233333333332210                 0 1  345567778888999999887


Q ss_pred             HhhhccCCCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCC
Q 009612          296 RRLKNSTKLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSK  374 (531)
Q Consensus       296 ~~~~~~~~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  374 (531)
                      ++.       ...|+++.+++..++ +.++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++     
T Consensus       208 ~~~-------~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----  275 (412)
T 2zbx_A          208 QTE-------PGAGLVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS-----  275 (412)
T ss_dssp             HHS-------CCSSHHHHHHHTTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----
T ss_pred             HhC-------CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH-----
Confidence            753       347899999987643 3699999999999999999999999999999999999999999999864     


Q ss_pred             CChhccCCChhHHHHHHHHhhCCCCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccc
Q 009612          375 ITDADVARLPYLQAVVKEALRVHPPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFL  453 (531)
Q Consensus       375 ~~~~~~~~lp~l~a~i~EtlRl~p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  453 (531)
                                |++|||+|+||++|+++ ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||-
T Consensus       276 ----------~l~a~i~E~lRl~p~~~~~~--~R~~~~d~~~~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~  342 (412)
T 2zbx_A          276 ----------LVPGAVEELLRYLAIADIAG--GRVATADIEVE-GQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA  342 (412)
T ss_dssp             ----------GHHHHHHHHHHHHCCCGGGC--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC
T ss_pred             ----------hHHHHHHHHHHhCCcccccc--ceeeCCCeEEC-CEEECCCCEEEeChhhhcCCccccCCccccCCCCCC
Confidence                      89999999999999999 45  89999999999 999999999999999999999999999999999972


Q ss_pred             cCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEE
Q 009612          454 EADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       454 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                                ..++|||.|+|.|+|++||++|++++++.|+++| +++++++ .+..+.  .+...+....++|+.
T Consensus       343 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~~~g~~~lpv~~  406 (412)
T 2zbx_A          343 ----------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLR--PGTTIQGVNELPVTW  406 (412)
T ss_dssp             ----------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBC--CTTSCCCBSCCEEEC
T ss_pred             ----------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceec--cccccCCcceeeeec
Confidence                      2589999999999999999999999999999999 7998753 223333  234444556677664


No 37 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=3.4e-61  Score=473.41  Aligned_cols=386  Identities=16%  Similarity=0.179  Sum_probs=309.0

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEc-CCCcc-EEEecCHHHHHHhhcCCCCCCCCcchhh
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSL-GGSTP-VVVASDPHTAKEILTSPHFADRPIKQSA  143 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~-~vvv~dp~~i~~vl~~~~~~~~~~~~~~  143 (531)
                      .+.+|||+++|+.++   .. .+++.++.+++ +|  |+|+++++ + +.+ +++|+|++.+++|+.+..|++++.....
T Consensus         7 ~~~~~~~~~~p~~~~---~~-~~p~~~~~~l~-~~--Gpv~~~~~~~-g~~p~~vv~~~~~v~~vl~~~~f~~~~~~~~~   78 (406)
T 1s1f_A            7 SQAVPPVRDWPAVDL---PG-SDFDPVLTELM-RE--GPVTRISLPN-GEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQ   78 (406)
T ss_dssp             -CCSCCEEECCCCCC---CT-TCCCHHHHHHH-HH--CSEEEEECSB-SBSCEEEECSHHHHHHHHTCTTEESTTTTTTT
T ss_pred             hhhccCCCCCCCCcc---cc-cCchHHHHHHH-hc--CCeeeeccCC-CcccEEEEcCHHHHHHHHcCCCccCCcCCCCC
Confidence            367888888888877   22 57888998885 78  89999986 5 555 9999999999999997677766543211


Q ss_pred             h----h-h-hcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHH
Q 009612          144 E----C-L-MFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAA  216 (531)
Q Consensus       144 ~----~-~-~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~  216 (531)
                      .    . . ..+.++++ .+|+.|+++||.+ .+.|+++.++.+.+.+.++++++++.+.+   .++++|+...+. .++
T Consensus        79 ~~~~~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~  153 (406)
T 1s1f_A           79 VTRLAPHFIPARGAVGF-LDPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLR---AGPPADLTEAVLSPFP  153 (406)
T ss_dssp             BCBSSSSCSSCTTSGGG-CCTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHH
T ss_pred             ccccccccccccccccc-CCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhHhH
Confidence            1    1 1 12566654 4899999999999 67899999999999999999999999974   245899987764 799


Q ss_pred             HHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHH
Q 009612          217 LNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHR  296 (531)
Q Consensus       217 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  296 (531)
                      +++++. +||.+++.      ...+......++....        |       +    ++..+....+.+++.+.|++++
T Consensus       154 ~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~~--------~-------~----~~~~~~~~~~~~~~~~~i~~r~  207 (406)
T 1s1f_A          154 IAVICE-LMGVPATD------RHSMHTWTQLILSSSH--------G-------A----EVSERAKNEMNAYFSDLIGLRS  207 (406)
T ss_dssp             HHHHHH-HHTCCGGG------HHHHHHHHHHHHHHHT--------T-------C----CCCHHHHTHHHHHHHHHHHTSC
T ss_pred             HHHHHH-HhCCCHHH------HHHHHHHHHHHHhccC--------C-------H----HHHHHHHHHHHHHHHHHHHHHH
Confidence            999998 69987642      2233333333322110        0       0    1233456677788888887654


Q ss_pred             hhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCC
Q 009612          297 RLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKIT  376 (531)
Q Consensus       297 ~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  376 (531)
                      +.       ...|+++.+++..+++.++++++.+++..+++|| |||+++++|++++|++||++|+|+++|++       
T Consensus       208 ~~-------~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------  272 (406)
T 1s1f_A          208 DS-------AGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE-------  272 (406)
T ss_dssp             CS-------CCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-------
T ss_pred             hC-------CCCCHHHHHHHhhcccCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------
Confidence            32       3569999999876556799999999999999999 99999999999999999999999999975       


Q ss_pred             hhccCCChhHHHHHHHHhhCCCCCC--CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCcccc
Q 009612          377 DADVARLPYLQAVVKEALRVHPPGP--LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLE  454 (531)
Q Consensus       377 ~~~~~~lp~l~a~i~EtlRl~p~~~--~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  454 (531)
                              |++|||+|+||++|+++  ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||..
T Consensus       273 --------~l~a~i~E~lRl~p~~~~~~~--~R~~~~d~~i~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~  341 (406)
T 1s1f_A          273 --------IRPRAIDELLRWIPHRNAVGL--SRIALEDVEIK-GVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPN  341 (406)
T ss_dssp             --------GHHHHHHHHHHHSCCBSSCCC--CEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC--C
T ss_pred             --------HHHHHHHHHHhhCCCccccCc--ceEeCCCEEEC-CEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCCC
Confidence                    89999999999999999  65  89999999999 9999999999999999999999999999999999952


Q ss_pred             CCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEe
Q 009612          455 ADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       455 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~  528 (531)
                                .++|||.|+|.|+|++||++|++++++.|+++| +++++++ .++.+.  .+...+....++|++.
T Consensus       342 ----------~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          342 ----------PHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFK--KGALIRGPEALPVTWH  405 (406)
T ss_dssp             ----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBC--SSCSBCCBSCCEEECC
T ss_pred             ----------CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceec--cCcccCCcceeEEeeC
Confidence                      489999999999999999999999999999999 7999875 223333  3445567788888764


No 38 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=4.1e-60  Score=466.46  Aligned_cols=376  Identities=17%  Similarity=0.190  Sum_probs=302.7

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchh-----hhhhhcccceecCCCChh
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQS-----AECLMFSRAIGFAPNGTY  160 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~-----~~~~~~g~~~~~~~~g~~  160 (531)
                      .+++..+.++ ++|  |||++++++ +.++|+++|++.+++++++ ..|++++....     ......+.+++ ..+|+.
T Consensus        13 ~~p~~~~~~~-r~y--Gpv~~~~~~-~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~   87 (404)
T 3ejb_B           13 KNPYSFYDTL-RAV--HPIYKGSFL-KYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMML-FQNQPD   87 (404)
T ss_dssp             HCHHHHHHHH-HHH--CSEEEEEET-TEEEEEECCHHHHHHHHHCTTEECCCSSCTTCCTTHHHHHHHHTSGG-GCCTTH
T ss_pred             cCchHHHHHH-Hhh--CCEeeccCC-CCCEEEEecHHHHHHHHhCcccccCcccccccccccchhhhhhcchh-hcCCch
Confidence            4788888888 589  899999999 8999999999999999985 45565553211     11123356664 458999


Q ss_pred             HHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchhHH
Q 009612          161 WRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQ  239 (531)
Q Consensus       161 w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~  239 (531)
                      |+++||.+ .+.|++++++.+.+.+.++++.+++.+.+    ++.+|+...+ ..++.++++. +||.+.+.      ..
T Consensus        88 h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~  155 (404)
T 3ejb_B           88 HRRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQG----KKKMEVISDFAFPLASFVIAN-IIGVPEED------RE  155 (404)
T ss_dssp             HHHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTHHHHHHHHHHH-HHTCCGGG------HH
T ss_pred             HHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhh----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH------HH
Confidence            99999999 78899999999999999999999998853    4678986655 4589999988 58976542      23


Q ss_pred             HHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhc
Q 009612          240 ELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEG  319 (531)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~  319 (531)
                      .+.+...........       |+      .....++..+....+.+++.+.++++++.       ...|+++.++...+
T Consensus       156 ~~~~~~~~~~~~~~~-------p~------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~  215 (404)
T 3ejb_B          156 QLKEWAASLIQTIDF-------TR------SRKALTEGNIMAVQAMAYFKELIQKRKRH-------PQQDMISMLLKGRE  215 (404)
T ss_dssp             HHHHHHHHHHGGGST-------TC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHC--
T ss_pred             HHHHHHHHHHHhccC-------CC------CHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CcchHHHHHHhccc
Confidence            344433333322211       21      11223566677888899999999887742       56799999993333


Q ss_pred             CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCC
Q 009612          320 EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPP  399 (531)
Q Consensus       320 ~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~  399 (531)
                      +++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||++|+
T Consensus       216 ~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~  280 (404)
T 3ejb_B          216 KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD---------------LIGTAVEECLRYESP  280 (404)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------GHHHHHHHHHHHSCS
T ss_pred             CCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------HHHHHHHHHHHhCCc
Confidence            34799999999999999999999999999999999999999999999976               899999999999999


Q ss_pred             CCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcch
Q 009612          400 GPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGK  479 (531)
Q Consensus       400 ~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~  479 (531)
                      ++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||-          ..++|||.|+|.|+|+
T Consensus       281 ~~~~--~R~~~~d~~~~-g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~----------~~~~~Fg~G~r~C~G~  347 (404)
T 3ejb_B          281 TQMT--ARVASEDIDIC-GVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP----------NPHLSFGHGHHVCLGS  347 (404)
T ss_dssp             BCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTCCTTH
T ss_pred             cccc--ceEeCCCeEEC-CEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC----------CCCCCCCCcCccCcCH
Confidence            9966  99999999998 999999999999999999999999999999999982          2489999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          480 NLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       480 ~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      +||++|+++++++|+++| +++++++ ++.+.  .+..++..+.++|+++||
T Consensus       348 ~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~~~--~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          348 SLARLEAQIAINTLLQRMPSLNLADF-EWRYR--PLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEC---CCCBC--SCSSBCCBSCCEEECC--
T ss_pred             HHHHHHHHHHHHHHHHhCcccccCCC-Cceec--cCcccCCcceeEEEEecc
Confidence            999999999999999999 9999853 34443  345666779999999987


No 39 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=9.3e-61  Score=470.66  Aligned_cols=394  Identities=13%  Similarity=0.094  Sum_probs=313.3

Q ss_pred             CCCCCCCCCCCCCCCCccc--ccccccC----CCchhHHHHHHHHhcCCC--ceEEEEcCCCccEEEecCHHHHHHhhcC
Q 009612           60 GRNQRGSVAIPGPKGVPLF--GSLFTLS----RGLAHRTLAAMAWSRGNT--QLMAFSLGGSTPVVVASDPHTAKEILTS  131 (531)
Q Consensus        60 ~~~~~~~~~~PgP~~~p~i--G~~~~~~----~~~~~~~~~~~~~ky~~g--~i~~~~lg~~~~~vvv~dp~~i~~vl~~  131 (531)
                      .++.++.+.||||++.|..  +..-.+.    ..+++..+.+|+ +|  |  +|++++.. + ++++|+|++.+++|+++
T Consensus         4 ~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~--G~~pv~~~~~~-g-~~vvv~~~~~v~~vl~~   78 (415)
T 2zwu_A            4 ETIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ES--NVPDLVWTRCN-G-GHWIATRGQLIREAYED   78 (415)
T ss_dssp             -------CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-ST--TSCSEEEECGG-G-CEEEECSHHHHHHHHHC
T ss_pred             ccccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hc--CCCCeEEecCC-C-CeEEEcCHHHHHHHHcC
Confidence            3445567899999998864  4332211    246888899885 78  8  99988833 3 47999999999999985


Q ss_pred             -CCCCCCC-cchhhhhhhcccc-eecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccch
Q 009612          132 -PHFADRP-IKQSAECLMFSRA-IGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSL  208 (531)
Q Consensus       132 -~~~~~~~-~~~~~~~~~~g~~-~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl  208 (531)
                       ..|++++ ..... ....+.+ +++ .+|+.|+++||.+ .+.|++..++.+.+.+.++++++++.+...    +++|+
T Consensus        79 ~~~f~~~~~~~~~~-~~~~~~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~----~~~d~  151 (415)
T 2zwu_A           79 YRHFSSECPFIPRE-AGEAYDFIPTS-MDPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQ----GQCNF  151 (415)
T ss_dssp             TTTEETTSCSSSHH-HHHHCCCTTTT-CCTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGG----TEEEH
T ss_pred             ccccCCCcccCCCC-ccccccccCcc-CCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccH
Confidence             4577776 22222 1222555 644 4899999999999 788999999999999999999999998652    37999


Q ss_pred             HHHH-HHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHH
Q 009612          209 RKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNF  287 (531)
Q Consensus       209 ~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~  287 (531)
                      ...+ ..+++++++.+ ||.+++.      ..++.+....++...        .|.            +..++...+.++
T Consensus       152 ~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~~~--------~P~------------~~~~~~~~~~~~  204 (415)
T 2zwu_A          152 TEDYAEPFPIRIFMLL-AGLPEED------IPHLKYLTDQMTRPD--------GSM------------TFAEAKEALYDY  204 (415)
T ss_dssp             HHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHHSCC--------SSS------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-cCCCHHH------HHHHHHHHHHHHhcc--------CHH------------HHHHHHHHHHHH
Confidence            9865 78999999998 9988742      234444444333210        121            234566778888


Q ss_pred             HHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHH
Q 009612          288 VRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHA  366 (531)
Q Consensus       288 ~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~  366 (531)
                      +.+.|+++++.       ...|+++.+++...++ .++++++..++..+++||+|||+++++|++++|++||++|+++|+
T Consensus       205 ~~~~i~~r~~~-------~~~dll~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~  277 (415)
T 2zwu_A          205 LIPIIEQRRQK-------PGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIE  277 (415)
T ss_dssp             HHHHHHHHHHS-------CCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHHhC-------CCCCHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHh
Confidence            89999887763       4579999999875433 599999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCC
Q 009612          367 ELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHV  446 (531)
Q Consensus       367 Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~  446 (531)
                      |++               |++|||+|+||++|+++.  . |.+++|++++ ||.||||+.|+++.+++||||++|+||++
T Consensus       278 E~~---------------~l~a~i~E~lRl~p~~~~--~-R~~~~d~~~~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~  338 (415)
T 2zwu_A          278 RPE---------------RIPAACEELLRRFSLVAD--G-RILTSDYEFH-GVQLKKGDQILLPQMLSGLDERENACPMH  338 (415)
T ss_dssp             CGG---------------GHHHHHHHHHHHTCCBCC--E-EEESSCEEET-TEEECTTCEEECCHHHHHHCTTTSSSTTS
T ss_pred             CHH---------------HHHHHHHHHHhhcCCcCC--c-eeeCCCEEEC-CEEECCCCEEEeCchhhCCCchhCCCccc
Confidence            975               899999999999999993  3 9999999999 99999999999999999999999999999


Q ss_pred             CCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhce-eeeCCCCCCCccccccccccccCceeE
Q 009612          447 FKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNPLRA  525 (531)
Q Consensus       447 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v  525 (531)
                      |+||||-          ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++  ..+. ..+....+..+++|
T Consensus       339 F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~-~~~~~~~~~~~lpv  405 (415)
T 2zwu_A          339 VDFSRQK----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG--AQIQ-HKSGIVSGVQALPL  405 (415)
T ss_dssp             CCTTCSS----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT--CCCC-EECSSBCEESCCEE
T ss_pred             cCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC--cccc-cCCccccCcceeEE
Confidence            9999961          25899999999999999999999999999999998 999863  3331 23455667789999


Q ss_pred             EEeeCC
Q 009612          526 VAVDRN  531 (531)
Q Consensus       526 ~~~~r~  531 (531)
                      +++||+
T Consensus       406 ~~~~r~  411 (415)
T 2zwu_A          406 VWDPAT  411 (415)
T ss_dssp             ECCGGG
T ss_pred             EEecCC
Confidence            999884


No 40 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.5e-60  Score=467.79  Aligned_cols=376  Identities=20%  Similarity=0.250  Sum_probs=304.2

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCc--chh---hhh---h---hcccceecC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPI--KQS---AEC---L---MFSRAIGFA  155 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~--~~~---~~~---~---~~g~~~~~~  155 (531)
                      ++++..+.+| ++|  |+|++++++ +.++|+|+||+.+++|+.+..+++++.  ...   ...   .   ..+.++ +.
T Consensus        15 ~~p~~~~~~l-~~y--Gpv~~~~~~-~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~   89 (408)
T 1odo_A           15 ADHHTEHRTL-REG--GPATWVDVL-GVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENM-FT   89 (408)
T ss_dssp             TTHHHHHHHH-HTT--CSEEEEEET-TEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCSG-GG
T ss_pred             CChHHHHHHH-HHh--CCeEEeccC-CCCEEEECCHHHHHHHHcCCCcccccccccccccccccccccccccccccc-cc
Confidence            6889999999 999  899999998 888999999999999998765544432  110   000   0   123455 45


Q ss_pred             CCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHHHHHHHHHHhccccccCCC
Q 009612          156 PNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAALNNIMGSVFGVRYDIDRD  234 (531)
Q Consensus       156 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~  234 (531)
                      .+|+.|+++||.+ .+.|++.+++.+.+.+.++++++++.+.+. .+++++|+...+. .+++|+++. +||.+.+    
T Consensus        90 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~----  162 (408)
T 1odo_A           90 AYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQD----  162 (408)
T ss_dssp             CCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH----
T ss_pred             cCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHH----
Confidence            5999999999999 788999999999999999999999999754 2357899999887 599999995 7998653    


Q ss_pred             chhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHH
Q 009612          235 SKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVL  314 (531)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~l  314 (531)
                        ....+...+..++..    .    .        .   .++..++...+.+++.++++++++.       ...|+++.+
T Consensus       163 --~~~~~~~~~~~~~~~----~----~--------~---~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~l  214 (408)
T 1odo_A          163 --RRDGFRALVDGVFDT----T----L--------D---QAEAQANTARLYEVLDQLIAAKRAT-------PGDDMTSLL  214 (408)
T ss_dssp             --HHHHHHHHHHHHHCT----T----C--------C---HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH
T ss_pred             --HHHHHHHHHHHHhcc----c----C--------C---HHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHH
Confidence              122333333333220    0    0        0   1345566778888999999887653       347999999


Q ss_pred             HhhhcC----CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHH
Q 009612          315 LSLEGE----EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVV  390 (531)
Q Consensus       315 l~~~~~----~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i  390 (531)
                      +++.++    ..++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|+               +|++|||
T Consensus       215 l~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------~~l~a~i  279 (408)
T 1odo_A          215 IAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE---------------VTWADVV  279 (408)
T ss_dssp             HHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS---------------SCHHHHH
T ss_pred             HHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------HHHHHHH
Confidence            987653    359999999999999999999999999999999999999999999974               3799999


Q ss_pred             HHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCC
Q 009612          391 KEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFG  470 (531)
Q Consensus       391 ~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg  470 (531)
                      +|+||++|+++... +|++++|+++++||.||||+.|+++.+++||||++|+||++|+||||          ...++|||
T Consensus       280 ~E~lRl~p~~~~~~-~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~pFG  348 (408)
T 1odo_A          280 EETLRHEPAVKHLP-LRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT----------VKEHLAFG  348 (408)
T ss_dssp             HHHHHHSCSBSCEE-EEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CCCCCTTC
T ss_pred             HHHHhhCCCccCCc-ceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CCCCCCCC
Confidence            99999999998522 89999999996599999999999999999999999999999999994          12589999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          471 AGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       471 ~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      .|+|.|+|++||++|++++++.|+++| ++++..+. .++....+.++++.++++|+++|
T Consensus       349 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          349 HGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPA-EELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             SSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTT-SCCCBCSCSSBCCBSCCEEECC-
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCc-cccccccCccccCcccceEEecC
Confidence            999999999999999999999999999 79987531 12333345677788999999876


No 41 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=4.7e-60  Score=464.42  Aligned_cols=373  Identities=18%  Similarity=0.189  Sum_probs=302.9

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchhhh------hh--hcccceecCCCC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQSAE------CL--MFSRAIGFAPNG  158 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~------~~--~~g~~~~~~~~g  158 (531)
                      .+++.++.++ ++|  |||++ + |  .++++|+|++.+++|+.+..|++++......      ..  ..+.++++ .+|
T Consensus        13 ~~p~~~~~~l-~~y--Gpv~~-~-g--~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g   84 (397)
T 3buj_A           13 RDPYPSYHWL-LRH--DPVHR-G-A--HRVWYVSRFADVRAVLGDERFARTGIRRFWTDLVGPGLLAEIVGDIILF-QDE   84 (397)
T ss_dssp             HCCHHHHHHH-HHH--CSEEE-C-G--GGCEEECSHHHHHHHHTCTTEESHHHHHHHHHHHCSSHHHHHHTTCGGG-CCT
T ss_pred             cCchHHHHHH-Hhc--CCeee-C-C--CCeEEEcCHHHHHHHHcCCCcccCccccccccccccccccccccccccc-CCc
Confidence            3677888776 589  89987 5 4  5789999999999999876666554321110      11  11556654 489


Q ss_pred             hhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHH-HHHHHHHHHHHHHhccccccCCCchh
Q 009612          159 TYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKH-LQLAALNNIMGSVFGVRYDIDRDSKS  237 (531)
Q Consensus       159 ~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~  237 (531)
                      +.|+++||.+ .+.|++++++.+.+.+.++++++++.+..    ++++|+... ...+++++++.+ ||.+++.      
T Consensus        85 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~------  152 (397)
T 3buj_A           85 PDHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAAD------  152 (397)
T ss_dssp             THHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG------
T ss_pred             hhHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHH------
Confidence            9999999999 78899999999999999999999999863    357998755 478999999998 9987642      


Q ss_pred             HHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhh
Q 009612          238 LQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSL  317 (531)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~  317 (531)
                      ...+......+......     .+        +....++..++.+.+.+++.+.|+++++.       ...|+++.|++.
T Consensus       153 ~~~~~~~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~  212 (397)
T 3buj_A          153 WGAVGRWSRDVGRTLDR-----GA--------SAEDMRRGHAAIAEFADYVERALARRRRE-------GGEDLLALMLDA  212 (397)
T ss_dssp             HHHHHHHHHHHHGGGCS-----SC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCC-----CC--------ChHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCCCHHHHHHHh
Confidence            23344444433332211     01        11223456677788999999999888764       356999999987


Q ss_pred             hcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCC
Q 009612          318 EGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVH  397 (531)
Q Consensus       318 ~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~  397 (531)
                      .+++.++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||++
T Consensus       213 ~~~~~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~  277 (397)
T 3buj_A          213 HDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD---------------LLAQAVEECLRYD  277 (397)
T ss_dssp             HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------GHHHHHHHHHHHS
T ss_pred             hhcCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH---------------HHHHHHHHHHhhc
Confidence            5433399999999999999999999999999999999999999999999964               9999999999999


Q ss_pred             CCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCc
Q 009612          398 PPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCP  477 (531)
Q Consensus       398 p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~  477 (531)
                      |+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|+
T Consensus       278 p~~~~~--~R~~~~d~~~~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~  344 (397)
T 3buj_A          278 PSVQSN--TRQLDVDVELR-GRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------VPSMSFGAGMRYCL  344 (397)
T ss_dssp             CSCCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------CCCSTTCCGGGCCT
T ss_pred             CcccCc--ceEECCCEEEC-CEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------CCCCCCCCCCccCC
Confidence            999965  89999999999 999999999999999999999999999999999995          24799999999999


Q ss_pred             chHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEeeC
Q 009612          478 GKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       478 G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      |++||++|++++++.| ++| ++++.++ .++.+  ..+.++++.++++|+++||
T Consensus       345 G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~--~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          345 GSYLARTQLRAAVAAL-ARLPGLRLGCASDALAY--QPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             THHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCB--CSCSSCCCBSCCEEECCTT
T ss_pred             CHHHHHHHHHHHHHHH-hcCCCceeCCCCccccc--ccccccCCCcceeEEecCC
Confidence            9999999999999999 999 8999875 23333  3355667889999999998


No 42 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=4.8e-61  Score=472.93  Aligned_cols=372  Identities=16%  Similarity=0.192  Sum_probs=301.8

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCCc---chh---hhh--hhcccceecCCC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRPI---KQS---AEC--LMFSRAIGFAPN  157 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~~---~~~---~~~--~~~g~~~~~~~~  157 (531)
                      .+++..+.+| ++|  |+|+++++ | +.++|+|+|++.+++|+.+..+++++.   ...   ...  ...+.+++ ..+
T Consensus        24 ~~p~~~~~~l-~~y--Gpv~~~~~~g-~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~   98 (408)
T 3abb_A           24 YQPPKAYEER-RGE--SPLTQVTLFD-GRPAWLITGHAEGRALLVDPRLSSDWGHPDFPVVVRRTEDRGGLAFPLI-GVD   98 (408)
T ss_dssp             TSCCHHHHHH-CCS--SSEEEEECTT-SCEEEEECCHHHHHHHHTCTTEECCTTSTTCCCCC---------CCTTT-TCC
T ss_pred             cCchHHHHHH-Hhc--CCeeeeecCC-CCcEEEEeCHHHHHHHHcCCCcccccccccccccccCCccccccccccc-cCC
Confidence            6889999999 899  89999998 7 889999999999999998755554432   111   111  01223454 459


Q ss_pred             ChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHHHHHHHHHHhccccccCCCch
Q 009612          158 GTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAALNNIMGSVFGVRYDIDRDSK  236 (531)
Q Consensus       158 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~~~  236 (531)
                      |+.|+++||.+ .+.|++.+++.+.+.++++++++++.+..   .++++|+...+. .+++++++. +||.+.+.     
T Consensus        99 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  168 (408)
T 3abb_A           99 DPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYGD-----  168 (408)
T ss_dssp             TTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-----
T ss_pred             chHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-----
Confidence            99999999999 78899999999999999999999999974   356899998886 489999997 79987642     


Q ss_pred             hHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHh
Q 009612          237 SLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLS  316 (531)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~  316 (531)
                       ...+...+...+..          +        ..  ++..++.+.+.+++.+.|+++++.       ...|+++.+++
T Consensus       169 -~~~~~~~~~~~~~~----------~--------~~--~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~  220 (408)
T 3abb_A          169 -HDFFEECSRNFVGA----------A--------TS--AEADAAFGELYTYLHGLVGRKQAE-------PEDGLLDELIA  220 (408)
T ss_dssp             -HHHHHHHHHHHC--------------------------CCSSHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHH
T ss_pred             -HHHHHHHHHHHhcc----------c--------ch--HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHh
Confidence             22333333322110          0        00  233455677888888888887653       34789999998


Q ss_pred             hhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhh
Q 009612          317 LEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALR  395 (531)
Q Consensus       317 ~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlR  395 (531)
                      +.++ +.++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++               |++|||+|+||
T Consensus       221 ~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------~l~a~i~E~lR  285 (408)
T 3abb_A          221 RQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG---------------AVSGVVEELLR  285 (408)
T ss_dssp             HHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH---------------HHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------hHHHHHHHHHH
Confidence            7543 4699999999999999999999999999999999999999999999875               89999999999


Q ss_pred             CCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCC
Q 009612          396 VHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRV  475 (531)
Q Consensus       396 l~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~  475 (531)
                      ++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||-          ..++|||.|+|.
T Consensus       286 l~p~~~~~--~R~~~~d~~~~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~  352 (408)
T 3abb_A          286 FTSVSDHI--VRMAKEDIEVG-GATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA----------RHHVGFGHGIHQ  352 (408)
T ss_dssp             HHCSSCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC----------TTCCTTCCGGGC
T ss_pred             hcCccccc--ceEeCCCeEEC-CEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC----------CCCCCCCCCCcC
Confidence            99999965  89999999998 999999999999999999999999999999999961          258999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEeeCC
Q 009612          476 CPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       476 C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      |+|++||++|++++++.|+++| ++++..+ .+..+.  .+.+.+....++|++++|.
T Consensus       353 C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          353 CLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIK--AGHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBC--CTTSCCSBSCCEEECSCCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCccceecCCccccccc--cCcccCCcceeEEEeCCCC
Confidence            9999999999999999999999 8998753 223333  3456667799999999984


No 43 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=6.6e-61  Score=470.66  Aligned_cols=372  Identities=15%  Similarity=0.142  Sum_probs=305.2

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhhhhhcccceecCCCChhHHHHH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLR  165 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R  165 (531)
                      .+++.++.+|+++|++|||+++.++ + ++++|+|++.+++|+++ +.|++++..........+...++..+|+.|+++|
T Consensus        19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~-~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R   96 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTPIGWSEAY-G-GHWVVAGYKEIQAVIQNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKKYR   96 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCSEEEECGG-G-CEEEECSHHHHHHHHTCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHHHH
T ss_pred             cChhHHHHHHHhcCCCCCeEEecCC-C-CEEEEccHHHHHHHHhChhhccCCcccccCCCCcccccCcccCCchHHHHHH
Confidence            6899999999999954699999888 5 48999999999999975 4677665543311122233333566999999999


Q ss_pred             HHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchhHHHHHHH
Q 009612          166 RIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQELTEM  244 (531)
Q Consensus       166 r~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~  244 (531)
                      |.+ .+.|+++.++.+.+.+.++++++++.+..    ++.+|+...+ ..+++++++. +||.+.+      ...++.+.
T Consensus        97 ~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------~~~~~~~~  164 (398)
T 4fb2_A           97 QLV-AKPFSPEATDLFTEQLRQSTNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPE------DGDTYRRW  164 (398)
T ss_dssp             HHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGG------GHHHHHHH
T ss_pred             HHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHH------HHHHHHHH
Confidence            999 78999999999999999999999998754    3458876554 6899999998 7897653      23444444


Q ss_pred             HHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC-CC
Q 009612          245 VREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE-KL  323 (531)
Q Consensus       245 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~l  323 (531)
                      ...++..           .         ..++..++.+.+.+++.+.++++++.       ...|+++.+++...++ .+
T Consensus       165 ~~~~~~~-----------~---------~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~~~l  217 (398)
T 4fb2_A          165 VWAITHV-----------E---------NPEEGAEIFAELVAHARTLIAERRTN-------PGNDIMSRVIMSKIDGESL  217 (398)
T ss_dssp             HHHHHHC-----------C---------CHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBTTBCC
T ss_pred             HHHHhcC-----------C---------CHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHcccCCCCC
Confidence            4443320           0         01255667788889999999888763       4679999999876544 59


Q ss_pred             CHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCC
Q 009612          324 SDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLL  403 (531)
Q Consensus       324 ~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~  403 (531)
                      ++++++.++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||++|+++ .
T Consensus       218 ~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~~~-~  281 (398)
T 4fb2_A          218 SEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE---------------LIPNAVDELLRFYGPAM-V  281 (398)
T ss_dssp             CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHHHHHHHHHHHCCBC-E
T ss_pred             CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------HHHHHHHHHHHhCCCcC-C
Confidence            9999999999999999999999999999999999999999999986               78999999999999999 6


Q ss_pred             ccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHH
Q 009612          404 SWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGL  483 (531)
Q Consensus       404 ~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  483 (531)
                        +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|+|++||+
T Consensus       282 --~R~~~~d~~l~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~  348 (398)
T 4fb2_A          282 --GRLVTQEVTVG-DITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP----------NRHLSLGHGIHRCLGAHLIR  348 (398)
T ss_dssp             --EEEECSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCSTTCCTTHHHHH
T ss_pred             --CeeeCCCEEEC-CEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC----------CCCCCCCCCCcCCCCHHHHH
Confidence              89999999998 999999999999999999999999999999999982          25899999999999999999


Q ss_pred             HHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          484 ATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       484 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +|++++++.|+++| +++++++.+..+..  +.+. ....++|+++||.
T Consensus       349 ~e~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~-~~~~lpv~~~~~~  394 (398)
T 4fb2_A          349 VEARVAITEFLKRIPEFSLDPNKECEWLM--GQVA-GMLHVPIIFPKGK  394 (398)
T ss_dssp             HHHHHHHHHHHHHCCSCEECTTSCCEEEC--SSBC-EEEECEEECCCCC
T ss_pred             HHHHHHHHHHHHhCCCcEECCCCCceecc--cccc-ccceeEEEEcCCC
Confidence            99999999999999 99998765444432  3333 3477999998874


No 44 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=5e-60  Score=465.19  Aligned_cols=371  Identities=17%  Similarity=0.205  Sum_probs=305.1

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchhh------hhhhcccceecCCCChh
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQSA------ECLMFSRAIGFAPNGTY  160 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~~  160 (531)
                      .+++..+.++ ++|  |+|++++++ +.++++|+|++.+++|+.+..|++++.....      .....+.+++ ..+|+.
T Consensus        20 ~~p~~~~~~l-~~y--Gpv~~~~~~-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~   94 (411)
T 3a4g_A           20 QNPHPAYAAL-RAE--DPVRKLALP-DGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMPATPTPMMI-LMDPPD   94 (411)
T ss_dssp             TCCHHHHHHH-HHH--CSEEEEEET-TEEEEEECSHHHHHHHHTCTTEESCGGGGSCGGGCTTCCSCSSCCGG-GCCTTH
T ss_pred             cCchHHHHHH-Hhc--CCeeeccCC-CCCEEEEecHHHHHHHHhCCCcccccccccccccccccCcccccccc-cCCchH
Confidence            5789999999 899  899999998 8899999999999999997667776543210      0111345664 459999


Q ss_pred             HHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchhHH
Q 009612          161 WRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQ  239 (531)
Q Consensus       161 w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~  239 (531)
                      |+++||.+ .+.|++.+++.+.+.+.++++++++.+..    ++++|+...+ ..+++++++.+ ||.+.+.      ..
T Consensus        95 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~------~~  162 (411)
T 3a4g_A           95 HTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAED------RD  162 (411)
T ss_dssp             HHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG------HH
T ss_pred             HHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH------HH
Confidence            99999999 78899999999999999999999999853    3579997554 68999999975 9987641      22


Q ss_pred             HHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhc
Q 009612          240 ELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEG  319 (531)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~  319 (531)
                      .+.+....++..         .|       +    ++..++.+.+.+++.+.|+++++.       ...|+++.+++..+
T Consensus       163 ~~~~~~~~~~~~---------~p-------~----~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~  215 (411)
T 3a4g_A          163 DFSAWSSVLVDD---------SP-------A----DDKNAAMGKLHGYLSDLLERKRTE-------PDDALLSSLLAVSD  215 (411)
T ss_dssp             HHHHHHHHHTTS---------SC-------T----TTHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCC
T ss_pred             HHHHHHHHHhcc---------CC-------H----HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc
Confidence            333333322211         11       1    134456677888899999887753       35699999998764


Q ss_pred             --CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCC
Q 009612          320 --EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVH  397 (531)
Q Consensus       320 --~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~  397 (531)
                        +..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++               |++|||+|+||++
T Consensus       216 ~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~  280 (411)
T 3a4g_A          216 EDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS---------------LISSAVEEFLRFD  280 (411)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------GHHHHHHHHHHHT
T ss_pred             cCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH---------------HHHHHHHHHHHhc
Confidence              23699999999999999999999999999999999999999999999864               8999999999999


Q ss_pred             CCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCC
Q 009612          398 PPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVC  476 (531)
Q Consensus       398 p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C  476 (531)
                      |+++ ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|
T Consensus       281 p~~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C  347 (411)
T 3a4g_A          281 SPVSQAP--IRFTAEDVTYS-GVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------SGGVFFGHGIHFC  347 (411)
T ss_dssp             CSBCBCC--CEEESSCEEET-TEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTCC
T ss_pred             ccccCCc--eeEeCCCEEEC-CEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccC
Confidence            9999 55  89999999999 999999999999999999999999999999999983          2489999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEeeCC
Q 009612          477 PGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       477 ~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +|++||++|++++++.|+++| ++++.++ .++.+.  .+.++++.++++|++++|+
T Consensus       348 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~lpv~~~~r~  402 (411)
T 3a4g_A          348 LGAQLARLEGRVAIGRLFADRPELALAVGLDELVYR--ESTLVRGLSRMPVTMGPRS  402 (411)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBC--CCTTBCCBSCCEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCcEECCCccccccc--cCccccCcceeEEEecCcc
Confidence            999999999999999999999 6998753 223333  3456667899999999985


No 45 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.8e-60  Score=468.75  Aligned_cols=375  Identities=19%  Similarity=0.260  Sum_probs=305.3

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCC-cchhhh--h------h---hc-ccce
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRP-IKQSAE--C------L---MF-SRAI  152 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~-~~~~~~--~------~---~~-g~~~  152 (531)
                      .+++..+.++ ++|  |||+++++ + +.++|+|+||+.+++|+.+..+++++ ......  .      .   .. +.++
T Consensus        17 ~~p~~~~~~l-~~y--Gpv~~~~~~g-~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (411)
T 1gwi_A           17 TDLDGESARL-RAA--GPLAAVELPG-GVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLANPGRSM   92 (411)
T ss_dssp             SCHHHHHHHH-HHT--CSEEEEEETT-TEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred             CChHHHHHHH-HHh--CCeeeeecCC-CccEEEEeCHHHHHHHHcCCccccCcccccccccccCCcccchhhhhcccccc
Confidence            5788999999 899  89999997 7 88999999999999999975554443 111110  0      0   12 3455


Q ss_pred             ecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHHHHHHHHHHhcccccc
Q 009612          153 GFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAALNNIMGSVFGVRYDI  231 (531)
Q Consensus       153 ~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~  231 (531)
                       +..+|+.|+++||.+ .+.|++.+++.+.+.++++++++++.+..   .++++|+...+. .+++++++. +||.+.+.
T Consensus        93 -~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~  166 (411)
T 1gwi_A           93 -LTVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR  166 (411)
T ss_dssp             -GGCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred             -ccCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCHHH
Confidence             455999999999999 78999999999999999999999998853   356899998886 599999995 79987532


Q ss_pred             CCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHH
Q 009612          232 DRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFV  311 (531)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~  311 (531)
                            ...+......++...        .        .   .++..++...+.+++.+.|+++++.       ...|++
T Consensus       167 ------~~~~~~~~~~~~~~~--------~--------~---~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l  214 (411)
T 1gwi_A          167 ------LPRLKVLFEKFFSTQ--------T--------P---PEEVVATLTELASIMTDTVAAKRAA-------PGDDLT  214 (411)
T ss_dssp             ------HHHHHHHHHHHHCTT--------S--------C---HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHH
T ss_pred             ------HHHHHHHHHHHhccC--------C--------C---hHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHH
Confidence                  233444433332210        0        0   1345567778888999999887653       357899


Q ss_pred             HHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHH
Q 009612          312 DVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVV  390 (531)
Q Consensus       312 ~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i  390 (531)
                      +.++++.++ +.++++++.+++..+++||+|||+++++|++++|++||++|+++++|+               +|++|||
T Consensus       215 ~~ll~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------~~l~a~i  279 (411)
T 1gwi_A          215 SALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE---------------AEWSAVV  279 (411)
T ss_dssp             HHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS---------------SCHHHHH
T ss_pred             HHHHHhcccCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh---------------HHHHHHH
Confidence            999987543 369999999999999999999999999999999999999999999874               3799999


Q ss_pred             HHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC-CCCCCCCCCccccCCcCCCCCCcccccC
Q 009612          391 KEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW-EDPHVFKPERFLEADVDVRGGDLRLAPF  469 (531)
Q Consensus       391 ~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~F  469 (531)
                      +|+||++|+++... +|.+++|++++ ||.||||+.|+++.+++||||++| +||++|+||||.+         ..++||
T Consensus       280 ~E~lRl~p~~~~~~-~R~~~~d~~~~-G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~lpF  348 (411)
T 1gwi_A          280 EETLRFSTPTSHVL-IRFAAEDVPVG-DRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------NRHISF  348 (411)
T ss_dssp             HHHHHHSCSBCCEE-EEEESSCEEET-TEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------SCCCTT
T ss_pred             HHHHHhCCcccCCc-eeeeCCCeEEC-CEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------CCcccC
Confidence            99999999998532 89999999998 999999999999999999999999 9999999999952         358999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEeeCC
Q 009612          470 GAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       470 g~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      |.|+|.|+|++||++|++++++.|+++| ++++..+ .++.+  ..+.+.++...++|++++|+
T Consensus       349 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~--~~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          349 GHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRN--KPVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCB--CSCTTBCCBSCCEEESSCC-
T ss_pred             CCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcccccc--cccccccCcceeEEEecCCC
Confidence            9999999999999999999999999999 7998753 22333  33456677899999999985


No 46 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=3.5e-60  Score=465.94  Aligned_cols=373  Identities=16%  Similarity=0.157  Sum_probs=302.9

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCC-ccEEEecCHHHHHHhhcCCCCCCCCcchhh---hhhh--c-ccceecCCCCh
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGS-TPVVVASDPHTAKEILTSPHFADRPIKQSA---ECLM--F-SRAIGFAPNGT  159 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~-~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~---~~~~--~-g~~~~~~~~g~  159 (531)
                      ++++..+.+++ +|  |||+++.++++ .+.++|+|++.+++|+.+..|++++.....   ....  . +.+++ ..+|+
T Consensus        27 ~~p~~~~~~l~-~~--Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg~  102 (411)
T 2dkk_A           27 PEFDPVLAELM-RE--GPLTRVRLPHGEGWAWLATRYDDVKAITNDPRFGRAEVTQRQITRLAPHFKPRPGSLA-FADQP  102 (411)
T ss_dssp             SCCCHHHHHHH-TT--CSEEEEECSBSBSCEEEECSHHHHHHHTTCTTEESGGGGGSCBCBSSSCCCCCTTCST-TCCTT
T ss_pred             ccccHHHHHHH-hc--CCeEeeecCCCceeEEEEcCHHHHHHHHcCCCcccCCCCCCCccccccchhccccccc-cCCch
Confidence            46778999887 78  89999998623 789999999999999997667665433210   1111  1 45554 55999


Q ss_pred             hHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHHHHHHHHHHhccccccCCCchhH
Q 009612          160 YWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAALNNIMGSVFGVRYDIDRDSKSL  238 (531)
Q Consensus       160 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~  238 (531)
                      .|+++|+.+ .+.|++++++.+.+.+.+.++++++.+...   ++++|+...+. .+++++++. +||.+++.      .
T Consensus       103 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------~  171 (411)
T 2dkk_A          103 DHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAE---GPPADLVERVLEPFPIAVVSE-VMGVPAAD------R  171 (411)
T ss_dssp             HHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHH---CSCEEHHHHTTTHHHHHHHHH-HHTCCSSH------H
T ss_pred             HHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeehHHHHHHHHHHHHHHH-HhCCCHHH------H
Confidence            999999999 788999999999999999999999999753   45799998776 699999998 59987642      2


Q ss_pred             HHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhh
Q 009612          239 QELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLE  318 (531)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~  318 (531)
                      ..+......    +..     ..+          ..++..++...+.+++.++++++++.       ...|+++.|++..
T Consensus       172 ~~~~~~~~~----~~~-----~~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~~  225 (411)
T 2dkk_A          172 ERVHSWTRQ----IIS-----TSG----------GAEAAERAKRGLYGWITETVRARAGS-------EGGDVYSMLGAAV  225 (411)
T ss_dssp             HHHHHHHGG----GCS-----SCS----------CSHHHHHHHHHHHHHHHHHHHTTTTC-------CSSCHHHHHHHHH
T ss_pred             HHHHHHHHH----HHh-----ccc----------hHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhc
Confidence            222222211    111     001          11345567778888888888876542       4569999999873


Q ss_pred             cCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCC
Q 009612          319 GEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHP  398 (531)
Q Consensus       319 ~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p  398 (531)
                      +++.++++++.+++..+++|| |||+++++|++++|++||++|+++++|++               |++|||+|+||++|
T Consensus       226 ~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p  289 (411)
T 2dkk_A          226 GRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG---------------ARGTALDELLRWIS  289 (411)
T ss_dssp             HTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT---------------CCHHHHHHHHHHSC
T ss_pred             CCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------HHHHHHHHHHhhCC
Confidence            334699999999999999999 99999999999999999999999999975               89999999999999


Q ss_pred             CCC-C-CccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCC
Q 009612          399 PGP-L-LSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVC  476 (531)
Q Consensus       399 ~~~-~-~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C  476 (531)
                      +++ . .  +|.+++|++++ |+.||||+.|+++.+++||||++|+||++||||||.          ..++|||.|+|.|
T Consensus       290 ~~~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----------~~~l~FG~G~r~C  356 (411)
T 2dkk_A          290 HRTSVGL--ARIALEDVEVH-GTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----------NPHLAYGNGHHFC  356 (411)
T ss_dssp             CBSSCCC--CEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----------CCCCTTCCSTTSC
T ss_pred             ccccCcc--ceEECCCEEEC-CEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----------CCCCCCCCCCCCC
Confidence            999 5 5  89999999998 999999999999999999999999999999999995          2589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEEeeCC
Q 009612          477 PGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       477 ~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +|++||++|++++++.|+++| ++++.++ .++.+.  .+..++...+++|++++|+
T Consensus       357 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          357 TGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWR--RKTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBC--CSSSBCCBSCCEEECCCCC
T ss_pred             cCHHHHHHHHHHHHHHHHHHCCCcEECCCccccccc--cCcccCCcceeEEEeccCC
Confidence            999999999999999999999 9999865 223333  3455667799999999995


No 47 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=1.3e-59  Score=462.79  Aligned_cols=370  Identities=15%  Similarity=0.176  Sum_probs=300.6

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCCcc-hhh---hhhhcccceecCCCChhH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRPIK-QSA---ECLMFSRAIGFAPNGTYW  161 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~~~-~~~---~~~~~g~~~~~~~~g~~w  161 (531)
                      .+++..+.++ ++|  |||+++++ + +.++++|+|++.+++|+.+..|++++.. ..+   .....+.+++ ..+|+.|
T Consensus        37 ~~p~~~~~~l-~~y--Gpv~~~~~~g-~~~~vvv~~~~~i~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h  111 (417)
T 2y5n_A           37 LTLAGRYGEL-QET--EPVSRVRPPY-GEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEPRTRPEMVKGGLL-SMDPPEH  111 (417)
T ss_dssp             CCCCHHHHHH-HHH--CSEEEEECSB-SCCEEEECSHHHHHHHHTCTTEESGGGGTSCCCBSSSSCCCCSGG-GCCTTHH
T ss_pred             cCchHHHHHH-Hhc--CCeEeeccCC-CceEEEECCHHHHHHHHcCCCcccCccccccccccCcccccccCc-cCCchHH
Confidence            5789999999 899  89999997 7 8899999999999999997667665432 111   1111345564 4599999


Q ss_pred             HHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHHHHHHHHHHhccccccCCCchhHHH
Q 009612          162 RLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAALNNIMGSVFGVRYDIDRDSKSLQE  240 (531)
Q Consensus       162 ~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~~~  240 (531)
                      +++||.+ .+.|++.+++.+.+.+.++++++++++..   +++++|+...+. .+++++++. +||.+++.      ...
T Consensus       112 ~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~------~~~  180 (417)
T 2y5n_A          112 SRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSAD------HDR  180 (417)
T ss_dssp             HHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG------HHH
T ss_pred             HHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH------HHH
Confidence            9999999 77899999999999999999999999974   223799997774 699999997 69987642      222


Q ss_pred             HHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcC
Q 009612          241 LTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGE  320 (531)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~  320 (531)
                      +......++..   .   . .        +   .++..++.+.+.+++.+.|+++++.       ...|+++.+++..++
T Consensus       181 ~~~~~~~~~~~---~---~-~--------~---~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~  235 (417)
T 2y5n_A          181 FTRWSGAFLST---A---E-V--------T---AEEMQEAAEQAYAYMGDLIDRRRKE-------PTDDLVSALVQARDQ  235 (417)
T ss_dssp             HHHHHHTTSTT---C---C-C--------C---HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBT
T ss_pred             HHHHHHHHhcc---c---C-C--------C---HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhcc
Confidence            33322221110   0   0 0        1   1355667788889999999887753       356999999987554


Q ss_pred             C-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCC
Q 009612          321 E-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPP  399 (531)
Q Consensus       321 ~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~  399 (531)
                      + .++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++               |++|||+|+||++|+
T Consensus       236 ~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~  300 (417)
T 2y5n_A          236 QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE---------------LIPSAVEELTRWVPL  300 (417)
T ss_dssp             TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHHHHHHHHHHCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------HHHHHHHHHHHhcCC
Confidence            3 699999999999999999999999999999999999999999999864               899999999999999


Q ss_pred             CC--CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCc
Q 009612          400 GP--LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCP  477 (531)
Q Consensus       400 ~~--~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~  477 (531)
                      ++  ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|+
T Consensus       301 ~~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~  367 (417)
T 2y5n_A          301 GVGTAF--PRYAVEDVTLR-GVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----------NQHLGFGHGVHHCL  367 (417)
T ss_dssp             BSSCCS--CEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------CCCCTTCCSTTSCT
T ss_pred             cccccc--ceEeCCCEEEC-CEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------CCcCCCCCCCcCCc
Confidence            99  55  89999999999 999999999999999999999999999999999983          25899999999999


Q ss_pred             chHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEE
Q 009612          478 GKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       478 G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      |++||++|++++++.|+++| ++++.++ .++.+.  .+...+..+.++|++
T Consensus       368 G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          368 GAPLARVELQVALEVLLQRLPGIRLGIPETQLRWS--EGMLLRGPLELPVVW  417 (417)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBC--CCSSBCCBSCCEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceec--cCcccCCcceeEEeC
Confidence            99999999999999999999 6998764 223333  345556668887764


No 48 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.9e-61  Score=489.93  Aligned_cols=416  Identities=15%  Similarity=0.156  Sum_probs=301.2

Q ss_pred             CCCCCCCCCCCCCCcccccccccC----CCchhHHHHHHHHhcCCCc-eEEEEcCCCccE-------EEecCHHHHHHhh
Q 009612           62 NQRGSVAIPGPKGVPLFGSLFTLS----RGLAHRTLAAMAWSRGNTQ-LMAFSLGGSTPV-------VVASDPHTAKEIL  129 (531)
Q Consensus        62 ~~~~~~~~PgP~~~p~iG~~~~~~----~~~~~~~~~~~~~ky~~g~-i~~~~lg~~~~~-------vvv~dp~~i~~vl  129 (531)
                      ...+.+.||||+++|++||++.+.    ..+++.++.++++||  |+ ||+++++ +.++       +++.|++..+.++
T Consensus        23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~ky--G~~Vf~~~l~-~~~~vv~~p~~v~~~~~~~~~~l~   99 (495)
T 3dsk_A           23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKY--NSTVYRVNMP-PGAFIAENPQVVALLDGKSFPVLF   99 (495)
T ss_dssp             -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHH--TCSEEEEECS-CCTTTCSCCEEEEECSTTTGGGGG
T ss_pred             CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHh--CCceEeecCC-CCCCccCCCCEEEEeCCcceeeec
Confidence            345678999999999999998764    368999999999999  78 9999999 7777       6677777777666


Q ss_pred             cCCCCCC-----CCcchhhhhhhcc---cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhc
Q 009612          130 TSPHFAD-----RPIKQSAECLMFS---RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQK  201 (531)
Q Consensus       130 ~~~~~~~-----~~~~~~~~~~~~g---~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~  201 (531)
                      .+....+     ....... . ++|   ...++..+|+.|+++|+.+ .+.|++.. +.+.+.+++.++.+++.+.....
T Consensus       100 ~~~~v~k~~~~~~~~~~~~-~-l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~  175 (495)
T 3dsk_A          100 DVDKVEKKDLLTGTYMPST-E-LTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELS  175 (495)
T ss_dssp             CTTTEECSSCTTSSSCCCG-G-GGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCCCc-c-ccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence            5422111     1111111 2 333   2233456999999999999 67788754 88999999999999999976544


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHh
Q 009612          202 HNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLV  281 (531)
Q Consensus       202 ~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~  281 (531)
                      +++++|+.+++..+++++++.++||.+++..+..+....+.+.+..... ...  ....+|..        ....+.+..
T Consensus       176 ~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~p~--~~~~~p~~--------~~~~~~~~~  244 (495)
T 3dsk_A          176 LKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNL-HPL--LSIGLPRV--------IEEPLIHTF  244 (495)
T ss_dssp             HHSSEESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHH-GGG--CCCSSCHH--------HHHHHHSSS
T ss_pred             cCCCccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhh-hhH--hHhccHHH--------HHHHHHHhh
Confidence            5678999999999999999999999988755322233333322221111 000  00012210        000000000


Q ss_pred             H----HHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHH-HhhcccHHHHHHHHHHHHhh
Q 009612          282 P----RVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMI-FRGTDTTALLTEWIMAELVL  356 (531)
Q Consensus       282 ~----~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~-~AG~~tta~~l~~~l~~L~~  356 (531)
                      +    .+.+..++..+            ...+.++.+++..++.+++++|+..+++.++ +||+|||+.+++|++++|+.
T Consensus       245 ~~~~~~~~~~~~~~~~------------~~~~~~~~ll~~~~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~  312 (495)
T 3dsk_A          245 SLPPALVKSDYQRLYE------------FFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGR  312 (495)
T ss_dssp             CCCGGGGHHHHHHHHH------------HHHHHCHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhHHHHHH------------HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence            0    00000000000            0012223444444456799999998777665 99999999999999999996


Q ss_pred             -CHHHHHHHHHHHHhh----cCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeec---CCeeeCCCCEEE
Q 009612          357 -NQKVQAKLHAELQAV----NSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLS---NGMLIPANTTAM  428 (531)
Q Consensus       357 -~P~~~~~l~~Ei~~~----~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~---~g~~ip~g~~v~  428 (531)
                       ||++|++||+|++++    ++.++++++++||||+|||+|+||++|+++..  .|.+++|+++.   +||.||||+.|+
T Consensus       313 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~--~r~a~~d~~l~~~~~g~~IpkG~~v~  390 (495)
T 3dsk_A          313 AGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQ--YGRAKKDLVIESHDAAFKVKAGEMLY  390 (495)
T ss_dssp             HCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEEECSSCEEEECTTCEEE
T ss_pred             cCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCcccc--ceeecCCeEeccCCCceEECCCCEEE
Confidence             999999999999988    36799999999999999999999999999987  68899999994   499999999999


Q ss_pred             echhhhhcCCCCCCCCCCCCCCccccCCcCC------CCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhceeeeC
Q 009612          429 VNMWAITHDSQVWEDPHVFKPERFLEADVDV------RGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVYIWVPD  502 (531)
Q Consensus       429 ~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~------~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~~~~~  502 (531)
                      ++.+++|+||++|+||++|+||||++++...      -+....++|||.|+|.|+|++||++|++++++.|+++|++...
T Consensus       391 ~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~  470 (495)
T 3dsk_A          391 GYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDI  470 (495)
T ss_dssp             EEHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred             eccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeC
Confidence            9999999999999999999999999753211      1112234555556699999999999999999999999999876


Q ss_pred             CCCCCCc
Q 009612          503 VASPADL  509 (531)
Q Consensus       503 ~~~~~~~  509 (531)
                      ++.+..+
T Consensus       471 ~~~~~~~  477 (495)
T 3dsk_A          471 EVGTSPL  477 (495)
T ss_dssp             EEEECSS
T ss_pred             CCCCccc
Confidence            5433333


No 49 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=1.8e-59  Score=461.14  Aligned_cols=369  Identities=19%  Similarity=0.256  Sum_probs=303.7

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcc--h----h------h-hh--hhcccc
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIK--Q----S------A-EC--LMFSRA  151 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~--~----~------~-~~--~~~g~~  151 (531)
                      .+++..+.++ ++|  |||++++++ +.++++++|++.+++|+.+..|++++..  .    .      . ..  ...+.+
T Consensus        14 ~~p~~~~~~l-~~y--Gpv~~~~~~-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (404)
T 1z8o_A           14 VDWYRTYAEL-RET--APVTPVRFL-GQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN   89 (404)
T ss_dssp             SSHHHHHHHH-HHH--CSEEEEEET-TEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred             cCcHHHHHHH-Hhc--CCeeeecCC-CceEEEEcCHHHHHHHHcCCCccccccccccccccccccccccccchhhhcccc
Confidence            5789999999 899  899999998 8899999999999999987677776543  1    1      1 11  113566


Q ss_pred             eecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccc
Q 009612          152 IGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYD  230 (531)
Q Consensus       152 ~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~  230 (531)
                      +++ .+|+.|+++||.+ .+.|++..++.+.+.+.++++++++.+..    ++++|+...+ ..+++++++. +||.+.+
T Consensus        90 l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  162 (404)
T 1z8o_A           90 MGT-SDPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGD----SGVVDIVDRFAHPLPIKVICE-LLGVDEK  162 (404)
T ss_dssp             GGG-CCTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCS----SSEEEHHHHTTTHHHHHHHHH-HTTCCGG
T ss_pred             ccc-CCCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCcchHHHHhHHHHHHHHHH-HhCCCHH
Confidence            644 4999999999999 78899999999999999999999998752    5689998765 6899999997 5998765


Q ss_pred             cCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccH
Q 009612          231 IDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADF  310 (531)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~  310 (531)
                      ..+   ....   ....++. .   .    .|        .  .++..++...+.+++.+.|+++++.       ...|+
T Consensus       163 ~~~---~~~~---~~~~~~~-~---~----~p--------~--~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dl  211 (404)
T 1z8o_A          163 YRG---EFGR---WSSEILV-M---D----PE--------R--AEQRGQAAREVVNFILDLVERRRTE-------PGDDL  211 (404)
T ss_dssp             GTT---THHH---HHHHHHC-C---C----GG--------G--HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSH
T ss_pred             HHH---HHHH---HHHHHhc-c---C----Ch--------h--HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCH
Confidence            322   2322   2322222 0   0    11        1  2456677788889999999887753       35699


Q ss_pred             HHHHHhh-hcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHH
Q 009612          311 VDVLLSL-EGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQA  388 (531)
Q Consensus       311 ~~~ll~~-~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a  388 (531)
                      ++.+++. .+++ .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|
T Consensus       212 l~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a  276 (404)
T 1z8o_A          212 LSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS---------------ALPN  276 (404)
T ss_dssp             HHHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHH
T ss_pred             HHHHHhhhcccCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------hHHH
Confidence            9999986 4433 599999999999999999999999999999999999999999999864               8999


Q ss_pred             HHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCccccc
Q 009612          389 VVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAP  468 (531)
Q Consensus       389 ~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~  468 (531)
                      ||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|
T Consensus       277 ~i~E~lRl~p~~~~~--~R~~~~d~~l~-g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~----------~~~~~  343 (404)
T 1z8o_A          277 AVEEILRYIAPPETT--TRFAAEEVEIG-GVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT----------RGHLS  343 (404)
T ss_dssp             HHHHHHHHTCSSCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCT
T ss_pred             HHHHHHHhcCCccCc--ceEECCCEEEC-CEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC----------CCccC
Confidence            999999999999965  89999999998 999999999999999999999999999999999983          25899


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEE
Q 009612          469 FGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       469 Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      ||.|+|.|+|++||++|++++++.|+++| ++++.++ .++.+.  .+.+++..++++|++
T Consensus       344 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          344 FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWR--RSLLLRGIDHLPVRL  402 (404)
T ss_dssp             TCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCC--CCSSSCCCSCCEEET
T ss_pred             CCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceec--cccccCCcceeEEEe
Confidence            99999999999999999999999999999 5898754 223333  355667778888876


No 50 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=8.5e-60  Score=465.43  Aligned_cols=377  Identities=16%  Similarity=0.198  Sum_probs=305.9

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCc-----chhh--hhhh--c-ccceecCC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPI-----KQSA--ECLM--F-SRAIGFAP  156 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~-----~~~~--~~~~--~-g~~~~~~~  156 (531)
                      .+++..+.++ ++|  |+|++ + + +.++|+|+|++.+++|+.+..|++++.     ....  ....  . +.+++ ..
T Consensus        26 ~~p~~~~~~l-~~~--Gpv~~-~-~-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~   98 (419)
T 1q5d_A           26 EDPFPAIERL-REA--TPIFY-W-D-EGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGLF-GL   98 (419)
T ss_dssp             TCCHHHHHHH-HHH--CSEEE-E-T-TTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHSTT-TS
T ss_pred             hChHHHHHHH-Hhh--CCccc-c-C-CCCEEEEecHHHHHHHHcCCCccccccccccccccccccchhhhhcccccc-cC
Confidence            5788999998 789  89998 5 6 678999999999999999755887762     1101  0111  1 44554 45


Q ss_pred             CChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHH-HHHHHHHHHHHHHhccccccCCCc
Q 009612          157 NGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKH-LQLAALNNIMGSVFGVRYDIDRDS  235 (531)
Q Consensus       157 ~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~~~~~  235 (531)
                      +|+.|+++||.+ .+.|++.+++.+.+.+.++++++++.+..    ++++|+... ...+++++++.+ ||.+++.    
T Consensus        99 ~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~----  168 (419)
T 1q5d_A           99 PPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPAEC----  168 (419)
T ss_dssp             CHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCGGG----
T ss_pred             CchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCHHH----
Confidence            899999999999 78899999999999999999999999864    247998865 488999999998 9987642    


Q ss_pred             hhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCc-cHHHHH
Q 009612          236 KSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNA-DFVDVL  314 (531)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-d~~~~l  314 (531)
                        ...+.+....+......    ..+|+.      ....++..+....+.+++.+.|+++++.       ... |+++.+
T Consensus       169 --~~~~~~~~~~~~~~~~~----~~~P~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~~dll~~l  229 (419)
T 1q5d_A          169 --DEKFRRFGSATARALGV----GLVPRV------DEETKTLVASVTEGLALLHGVLDERRRN-------PLENDVLTML  229 (419)
T ss_dssp             --HHHHHHHHHHHHHHTTT----TTSSCC------CSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSCHHHHH
T ss_pred             --HHHHHHHHHHHHHhccc----ccccCC------hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCCHHHHH
Confidence              22344444443332211    122321      1122456677888999999999888753       345 999999


Q ss_pred             HhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHH
Q 009612          315 LSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEA  393 (531)
Q Consensus       315 l~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~Et  393 (531)
                      ++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++               |++|||+|+
T Consensus       230 l~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~  294 (419)
T 1q5d_A          230 LQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG---------------LMRNALDEV  294 (419)
T ss_dssp             HHHHHSSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHHHHHHH
T ss_pred             HhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------HHHHHHHHH
Confidence            987543 3699999999999999999999999999999999999999999999853               899999999


Q ss_pred             hhCCCCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCC
Q 009612          394 LRVHPPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAG  472 (531)
Q Consensus       394 lRl~p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G  472 (531)
                      ||++|+++ ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||-          ..++|||.|
T Consensus       295 lRl~p~~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G  361 (419)
T 1q5d_A          295 LRFDNILRIGT--VRFARQDLEYC-GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT----------SASLAYGRG  361 (419)
T ss_dssp             HHHSCSBSSEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCG
T ss_pred             HHhCCcccccc--ceeeCCCeEEC-CEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC----------CCCCCCCCC
Confidence            99999999 55  89999999999 999999999999999999999999999999999941          258999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          473 RRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       473 ~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +|.|+|++||++|++++++.|+++| ++++.++  ..+.  .+.++++..+++|+++||+
T Consensus       362 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~--~~~~~~~~~~l~v~~~~r~  417 (419)
T 1q5d_A          362 PHVCPGVSLARLEAEIAVGTIFRRFPEMKLKET--PVFG--YHPAFRNIESLNVILKPSK  417 (419)
T ss_dssp             GGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC--CEEC--CCSSBCCEEECEEESSCC-
T ss_pred             CCcCccHHHHHHHHHHHHHHHHHhCCCeEECCC--cccc--cccccCCCceeEEEEecCC
Confidence            9999999999999999999999999 8999864  3332  3456677899999999985


No 51 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.7e-59  Score=457.46  Aligned_cols=373  Identities=17%  Similarity=0.177  Sum_probs=303.5

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhhhhhcccceecCCCChhHHHHH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLR  165 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R  165 (531)
                      .+++.++.++++ |  |||+  +++ . ++++|+||+.+++|+.+ ..|++++... . ....+.++++ .+|+.|+++|
T Consensus        18 ~~p~~~~~~l~~-~--Gpv~--~~~-~-~~vvv~~~~~v~~vl~~~~~f~~~~~~~-~-~~~~~~~l~~-~~g~~h~~~R   87 (398)
T 2xkr_A           18 REARAAYRWMRA-N--QPVF--RDR-N-GLAAASTYQAVIDAERQPELFSNAGGIR-P-DQPALPMMID-MDDPAHLLRR   87 (398)
T ss_dssp             TTHHHHHHHHHH-H--CSEE--ECT-T-CCEEECSHHHHHHHHTCTTTEESTTCSS-T-TSCCCSSGGG-CCTTHHHHHH
T ss_pred             cChhHHHHHHHh-c--CCee--ecC-C-CeEEEecHHHHHHHHhCcccccCccccC-C-cccccccccc-cCchHHHHHH
Confidence            678999999987 8  8996  566 4 68999999999999986 4477765432 1 1123555544 4899999999


Q ss_pred             HHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHH-HHHHHHHHHHHHHhccccccCCCchhHHHHHHH
Q 009612          166 RIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKH-LQLAALNNIMGSVFGVRYDIDRDSKSLQELTEM  244 (531)
Q Consensus       166 r~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~  244 (531)
                      |.+ .+.|++..++.+.+.+.++++++++.+..    ++++|+... ...+++++++.+ ||.+++.      ..++.+.
T Consensus        88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~------~~~~~~~  155 (398)
T 2xkr_A           88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQ------RDMFLRW  155 (398)
T ss_dssp             HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHH
T ss_pred             HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH------HHHHHHH
Confidence            999 78999999999999999999999998854    247999954 568999999998 9988642      2334444


Q ss_pred             HHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcC-CCC
Q 009612          245 VREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGE-EKL  323 (531)
Q Consensus       245 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~l  323 (531)
                      ..........    .++|         ...++..++...+.+++.+.++++++.       ...|+++.+++...+ ..+
T Consensus       156 ~~~~~~~~~~----~~~p---------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~~~~l  215 (398)
T 2xkr_A          156 SDDLVTFLSS----HVSQ---------EDFQITMDAFAAYNDFTRATIAARRAD-------PTDDLVSVLVSSEVDGERL  215 (398)
T ss_dssp             HHHHHHHHTS----CCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBTTBCC
T ss_pred             HHHHHhccCc----ccch---------hhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccCCCC
Confidence            4443332111    1112         123456677788899999999887752       457999999987644 359


Q ss_pred             CHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCC
Q 009612          324 SDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLL  403 (531)
Q Consensus       324 ~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~  403 (531)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||++|+++..
T Consensus       216 s~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~~~~~  280 (398)
T 2xkr_A          216 SDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS---------------LLPGAIEEMLRWTAPVKNM  280 (398)
T ss_dssp             CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------GHHHHHHHHHHHHCSBCEE
T ss_pred             CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------HHHHHHHHHHhhcccccCc
Confidence            9999999999999999999999999999999999999999999986               8999999999999999985


Q ss_pred             ccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHH
Q 009612          404 SWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGL  483 (531)
Q Consensus       404 ~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  483 (531)
                        +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||..          .++|||.|+|.|+|++||+
T Consensus       281 --~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~  347 (398)
T 2xkr_A          281 --CRVLTADTEFH-GTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----------SHLAFGFGTHFCLGNQLAR  347 (398)
T ss_dssp             --EEEESSCEEET-TEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC----------CCCTTCCSTTCCTTHHHHH
T ss_pred             --ceEECCCeeEC-CEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC----------CCCcCCCCCcCCcCHHHHH
Confidence              99999999999 9999999999999999999999999999999999842          3899999999999999999


Q ss_pred             HHHHHHHHHHHhhc-eeeeCCCCCCCccc-cccccccccCceeEEEeeCC
Q 009612          484 ATVSLWVAQLVKVY-IWVPDVASPADLSE-VLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       484 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +|++++++.|+++| ++++.++  ..+.. ..+.......+++|+++||.
T Consensus       348 ~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~lpv~~~p~~  395 (398)
T 2xkr_A          348 LELSLMTERVLRRLPDLRLVAD--DSVLPLRPANFVSGLESMPVVFTPSP  395 (398)
T ss_dssp             HHHHHHHHHHHHHSTTCEESCT--TCCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred             HHHHHHHHHHHHhCCCceECCC--cceecccCcccccCccceeEEecCCC
Confidence            99999999999999 5999753  23320 22344456688999998874


No 52 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=1.4e-59  Score=462.31  Aligned_cols=387  Identities=17%  Similarity=0.179  Sum_probs=305.1

Q ss_pred             CCCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCCcchhh
Q 009612           65 GSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRPIKQSA  143 (531)
Q Consensus        65 ~~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~  143 (531)
                      .....+||.. |+-   ..+. .+++..+.+|+ +|  |||+++++ | +.++|+|+||+.+++|+.+..|++++.....
T Consensus         5 ~~~~~~g~~~-~~~---~~~~-~~p~~~~~~l~-~~--Gpv~~~~~~g-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~   75 (413)
T 2z36_A            5 VADELAGLEL-PVE---RGCP-FAPPAAYERLR-ER--APINKVRLTS-GGQAWWVSGHEEARAVLADGRFSSDKRKDGF   75 (413)
T ss_dssp             -----CCCEE-CCC---CCBT-TBCCHHHHHHH-HH--CSEEEEEETT-SCEEEEECSHHHHHHHHHCTTEECCTTSTTC
T ss_pred             HHHHhccccC-CCC---cccc-cCchHHHHHHH-Hc--CCeeEeecCC-CceEEEEecHHHHHHHHcCCCcccCccccCc
Confidence            3567788764 432   2343 58899999997 88  89999997 7 8899999999999999987667766532211


Q ss_pred             ------hhhh----cccc-eecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH
Q 009612          144 ------ECLM----FSRA-IGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL  212 (531)
Q Consensus       144 ------~~~~----~g~~-~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~  212 (531)
                            ....    .+.+ ++ ..+|+.|+++||.+ .+.|++.+++.+.+.++++++++++.+.+.  .++++|+...+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~l~-~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~~~~d~~~~~  151 (413)
T 2z36_A           76 PLFTLDAATLQQLRSQPPLML-GMDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLAT--DQRPVDLVQAL  151 (413)
T ss_dssp             CCSSCCHHHHHHHTTSCCCGG-GCCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTC--SCSSEEHHHHT
T ss_pred             ccccccccccccccccccccc-ccCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCccHHHHH
Confidence                  1111    2566 54 45899999999999 788999999999999999999999998642  35689998766


Q ss_pred             H-HHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHH
Q 009612          213 Q-LAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGI  291 (531)
Q Consensus       213 ~-~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  291 (531)
                      . .+++++++. +||.+++.      ...+......++.   ..     .        +    ++..++...+.+++.+.
T Consensus       152 ~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~---~~-----~--------~----~~~~~~~~~~~~~~~~~  204 (413)
T 2z36_A          152 SLPVPSLVICE-LLGVPYTD------HDFFQSRTTMMVS---RT-----S--------M----EDRRRAFAELRAYIDDL  204 (413)
T ss_dssp             TTHHHHHHHHH-HHTCCGGG------HHHHHHHHHHTTC---SS-----C--------H----HHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHH-HhCCCHHH------HHHHHHHHHHHhc---cc-----C--------c----HHHHHHHHHHHHHHHHH
Confidence            5 689999998 49987642      2223222221110   00     0        1    34556777888899999


Q ss_pred             HHHHHhhhccCCCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q 009612          292 IEEHRRLKNSTKLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQA  370 (531)
Q Consensus       292 i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  370 (531)
                      ++++++.       ...|+++.+++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++ 
T Consensus       205 i~~r~~~-------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-  276 (413)
T 2z36_A          205 ITRKESE-------PGDDLFSRQIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG-  276 (413)
T ss_dssp             HHHHHSS-------CCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-
T ss_pred             HHHHHhC-------CCCCHHHHHHHhhcCCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH-
Confidence            9887653       356899999986433 3699999999999999999999999999999999999999999999964 


Q ss_pred             hcCCCChhccCCChhHHHHHHHHhhCCCCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCC
Q 009612          371 VNSKITDADVARLPYLQAVVKEALRVHPPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKP  449 (531)
Q Consensus       371 ~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P  449 (531)
                                    |++|||+|+||++|+++ ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+|
T Consensus       277 --------------~l~a~i~E~lRl~p~~~~~~--~R~~~~d~~~~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P  339 (413)
T 2z36_A          277 --------------RTPMAVEELLRYFTIADGVT--SRLATEDVEIG-GVSIKAGEGVIVSMLSANWDPAVFKDPAVLDV  339 (413)
T ss_dssp             --------------GHHHHHHHHHHHHCTTTTCE--EEEECSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCT
T ss_pred             --------------HHHHHHHHHHHhCCCcccce--eeeeCCCEEEC-CEEECCCCEEEEChHhhcCChhhCCCccccCC
Confidence                          89999999999999999 55  89999999999 99999999999999999999999999999999


Q ss_pred             CccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEE
Q 009612          450 ERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       450 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      |||.          ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .++.+.+  +...+....++|++
T Consensus       340 eR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~--~~~~~g~~~lpv~~  407 (413)
T 2z36_A          340 ERGA----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKG--DSVIYGVHELPVTW  407 (413)
T ss_dssp             TCCC----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCT--TSSSCCBSCCEEEC
T ss_pred             CCCC----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceecc--cccccCcceeeEEe
Confidence            9983          2489999999999999999999999999999999 5898765 2334433  33344456777765


Q ss_pred             e
Q 009612          528 V  528 (531)
Q Consensus       528 ~  528 (531)
                      .
T Consensus       408 ~  408 (413)
T 2z36_A          408 H  408 (413)
T ss_dssp             C
T ss_pred             e
Confidence            3


No 53 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=9e-59  Score=454.50  Aligned_cols=364  Identities=19%  Similarity=0.227  Sum_probs=297.7

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCCCCCcchh-hhhhhcccc--eecCCCC----
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFADRPIKQS-AECLMFSRA--IGFAPNG----  158 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-~~~~~~g~~--~~~~~~g----  158 (531)
                      .+++.++.++ ++|  |||+++++ + +.++|+|+||+.+++|+.+..|++++.... ......+.+  + +..+|    
T Consensus        26 ~~p~~~~~~l-~~y--Gpv~~~~~~~-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~l-~~~~g~~~~  100 (404)
T 2xbk_A           26 LKLSPLLRAL-QDR--GPIHRVRTPA-GDEAWLVTRHAELKQLLHDERIGRTHPDPPSAAQYVRSPFLDL-LISDADAES  100 (404)
T ss_dssp             TBCCHHHHHH-HHH--CSEEEEECTT-SCEEEEECSHHHHHHHTTCTTEESBCSSGGGSCCSSCCHHHHT-TCBCSCHHH
T ss_pred             cCccHHHHHH-Hhh--CCEeeeccCC-CceEEEEcCHHHHHHHHcCCCCCCCccccccCCcccccccccc-eeeCCCCCC
Confidence            5788999999 899  89999997 7 889999999999999999766766654321 111122444  4 44589    


Q ss_pred             --hhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCc
Q 009612          159 --TYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDS  235 (531)
Q Consensus       159 --~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~  235 (531)
                        +.|+++||.+ .+.|++.+++.+.+.+.++++++++.+..   .++++|+...+ ..+++++++. +||.+++.    
T Consensus       101 ~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----  171 (404)
T 2xbk_A          101 GRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQR----  171 (404)
T ss_dssp             HHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG----
T ss_pred             CCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH----
Confidence              9999999999 78899999999999999999999999974   35689998766 5699999997 79987641    


Q ss_pred             hhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHH
Q 009612          236 KSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLL  315 (531)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll  315 (531)
                        ...+.+....++..   .     .|       +     +..++...+.+++.+.++++++.       ...|+++.+ 
T Consensus       172 --~~~~~~~~~~~~~~---~-----~~-------p-----~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~l-  221 (404)
T 2xbk_A          172 --RAELTTLLAGIAKL---D-----DR-------E-----GAVRAQDDLFGYVAGLVEHKRAE-------PGPDIISRL-  221 (404)
T ss_dssp             --HHHHHHHHHHHTBS---S-----CH-------H-----HHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH-
T ss_pred             --HHHHHHHHHHHHhc---c-----Cc-------H-----HHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHh-
Confidence              22333333332210   0     00       1     34566778888899999887753       346899988 


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhh
Q 009612          316 SLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALR  395 (531)
Q Consensus       316 ~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlR  395 (531)
                      +  ++ .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||
T Consensus       222 ~--~~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lR  283 (404)
T 2xbk_A          222 N--DG-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD---------------VMARAVEEVLR  283 (404)
T ss_dssp             H--SS-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH---------------HHHHHHHHHHH
T ss_pred             h--cC-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------HHHHHHHHHHH
Confidence            2  33 799999999999999999999999999999999999999999999986               89999999999


Q ss_pred             CCCCCC--CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCC
Q 009612          396 VHPPGP--LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGR  473 (531)
Q Consensus       396 l~p~~~--~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~  473 (531)
                      ++|+++  ..  +|++++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+
T Consensus       284 l~p~~~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~  350 (404)
T 2xbk_A          284 TARAGGSVLP--PRYASEDMEFG-GVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP----------NPHLTFGHGI  350 (404)
T ss_dssp             HSCSSCCBCS--CEEESSCEEET-TEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS----------CCCCTTEETT
T ss_pred             hCCCcccccc--ceeECCCeeEC-CEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC----------CCCCCCCCCC
Confidence            999999  55  89999999998 999999999999999999999999999999999983          2589999999


Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEE
Q 009612          474 RVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       474 r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      |.|+|++||++|++++++.|+++| ++++.++ .++.+  ..+..++....++|++
T Consensus       351 r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~--~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          351 WHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRL--KEGQLSGGFAELRVVW  404 (404)
T ss_dssp             EECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCB--CSSBTTCCBSCCEEEC
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCccee--ccCcccCCcceeeeeC
Confidence            999999999999999999999999 7998764 22333  3345556678888764


No 54 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=2.4e-59  Score=462.42  Aligned_cols=378  Identities=15%  Similarity=0.133  Sum_probs=297.6

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCC-CccEEEecCHHHHHHhhcCCCCCCCCcc--------hhh-------hhhhccc
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGG-STPVVVASDPHTAKEILTSPHFADRPIK--------QSA-------ECLMFSR  150 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~-~~~~vvv~dp~~i~~vl~~~~~~~~~~~--------~~~-------~~~~~g~  150 (531)
                      .+++.++.+++ +|  |||+++++|. +.++++|+|++.+++|+.+..|++++..        ...       .....+.
T Consensus        20 ~~p~~~~~~l~-~~--Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (425)
T 2z3t_A           20 ADPYPVYRRYR-EA--APVHRTASGPGKPDTYYVFTYDDVVRVLSNRRLGRNARVASGDTDTAPVPIPTEHRALRTVVEN   96 (425)
T ss_dssp             HCCHHHHHHHH-HH--CSEEEECCCSSCCCEEEECSHHHHHHHHHCTTEESSCCCC---------------CHHHHHHTT
T ss_pred             cChHHHHHHHH-hc--CCeEeccccCCCCCeEEEcCHHHHHHHHcCCCcccccccccccccccccccccccccccccccc
Confidence            46788888886 58  8999988741 2568999999999999987677776531        110       1112235


Q ss_pred             ceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhcccc
Q 009612          151 AIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRY  229 (531)
Q Consensus       151 ~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~  229 (531)
                      ++++. +|+.|+++||.+ .+.|++.+++.+.+.+.++++++++.+...    +++|+...+ ..+++++++.+ ||.++
T Consensus        97 ~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----g~~dl~~~~~~~~~~~vi~~~-~G~~~  169 (425)
T 2z3t_A           97 WLVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRAQ----RRPDLVEGFAAPLPILVISAL-LGIPE  169 (425)
T ss_dssp             CGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTS----SSCBHHHHTTTHHHHHHHHHH-HTCCG
T ss_pred             ccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccHHHHHHHHHHHHHHHHH-hCCCH
Confidence            66554 899999999999 789999999999999999999999998642    379998755 78999999998 99876


Q ss_pred             ccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCcc
Q 009612          230 DIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNAD  309 (531)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  309 (531)
                      +.      ...+.+....+.....      .+|    +  +....++..++.+.+.+++.+.++++++.       ...|
T Consensus       170 ~~------~~~~~~~~~~~~~~~~------~~~----~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d  224 (425)
T 2z3t_A          170 ED------HTWLRANAVALQEAST------TRA----R--DGRGYARAEAASQEFTRYFRREVDRRGGD-------DRDD  224 (425)
T ss_dssp             GG------HHHHHHHHHHHHTTCT------TCC----C-----HHHHHHHHHHHHHHHHHHHHCC--------------C
T ss_pred             HH------HHHHHHHHHHHHhhcc------ccC----C--CHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCC
Confidence            42      2233333333332211      112    1  11223456677778888888888776542       3579


Q ss_pred             HHHHHHhhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHH
Q 009612          310 FVDVLLSLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQA  388 (531)
Q Consensus       310 ~~~~ll~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a  388 (531)
                      +++.+++..++ +.++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++               |++|
T Consensus       225 ll~~ll~~~~~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a  289 (425)
T 2z3t_A          225 LLTLLVRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE---------------STPA  289 (425)
T ss_dssp             HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHH
T ss_pred             HHHHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------hHHH
Confidence            99999987544 3699999999999999999999999999999999999999999999975               8999


Q ss_pred             HHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCccccc
Q 009612          389 VVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAP  468 (531)
Q Consensus       389 ~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~  468 (531)
                      ||+|+||++|+++..  +|++++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|
T Consensus       290 ~i~E~lRl~p~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~  356 (425)
T 2z3t_A          290 AVEELMRYDPPVQAV--TRWAYEDIRLG-DHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA----------ERQVG  356 (425)
T ss_dssp             HHHHHHHHSCSBCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS----------SCCCT
T ss_pred             HHHHHHHhCCcccCc--ceEeCCCeeEC-CEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC----------CCCCC
Confidence            999999999999965  89999999999 999999999999999999999999999999999995          25899


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          469 FGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       469 Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      ||.|+|.|+|++||++|++++++.|+++| +++ +++....+  ..+.++++...++|++++.
T Consensus       357 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~--~~~~~~~~~~~lpv~~~~~  416 (425)
T 2z3t_A          357 FGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEVEY--ADDMVFHGPTRLLLDLPDA  416 (425)
T ss_dssp             TCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEE--CSCSSBCCEEEEEECCC--
T ss_pred             CCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCcccc--ccccccCCcceeeEEecch
Confidence            99999999999999999999999999999 899 75321123  3345667778999988775


No 55 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=5.5e-59  Score=460.23  Aligned_cols=375  Identities=15%  Similarity=0.150  Sum_probs=303.8

Q ss_pred             CchhHHHHHHHHhcCCC-ceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhh-hhhcccceecCCCChhHHH
Q 009612           87 GLAHRTLAAMAWSRGNT-QLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAE-CLMFSRAIGFAPNGTYWRL  163 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g-~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~-~~~~g~~~~~~~~g~~w~~  163 (531)
                      .+++.++.++++++  | ||+++..+ + ++++|+|++.+++|+++ +.|++++...... ....+.++ +..+|+.|++
T Consensus        38 ~dp~~~~~~lr~~~--G~pv~~~~~~-~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~-~~~dg~~h~~  112 (421)
T 3lxh_A           38 QGFHEAWKRVQQPD--TPPLVWTPFT-G-GHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVP-TKLDPPEHTP  112 (421)
T ss_dssp             GCHHHHHHHHCCTT--CCSEEEESST-T-SEEEECSHHHHHHHHTCTTTEETTCCSSSHHHHHHCCCTT-TTCCTTTHHH
T ss_pred             cChhHHHHHHHhcC--CCCeEeccCC-C-CeEEEcCHHHHHHHHcChhhccCCcccCCcccccccccCC-ccCCcHHHHH
Confidence            47899999888665  5 89888877 4 48999999999999985 5677766332111 11123344 4569999999


Q ss_pred             HHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchhHHHHH
Q 009612          164 LRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQELT  242 (531)
Q Consensus       164 ~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~  242 (531)
                      +|+.+ .+.|++..++.+.+.+.++++.+++.+..    ++.+|+...+ ..++.++++. +||.+.+      ....+.
T Consensus       113 ~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~------~~~~~~  180 (421)
T 3lxh_A          113 YRKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVE------DATKLG  180 (421)
T ss_dssp             HHHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGG------GHHHHH
T ss_pred             HHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHH------HHHHHH
Confidence            99999 78899999999999999999999998853    3578876666 5577777765 5887653      344455


Q ss_pred             HHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC-
Q 009612          243 EMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE-  321 (531)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-  321 (531)
                      +....++...      ..+|        ....++..+..+.+.+++.+.++++++.       ...|+++.++++..++ 
T Consensus       181 ~~~~~~~~~~------~~~p--------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~~~~  239 (421)
T 3lxh_A          181 LLANEMTRPS------GNTP--------EEQGRSLEAANKGFFEYVAPIIAARRGG-------SGTDLITRILNVEIDGK  239 (421)
T ss_dssp             HHHHHHHSCC------CSSH--------HHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTSCBTTB
T ss_pred             HHHHHHhccc------cCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhccCC
Confidence            5554443221      1122        2234567778888999999999887654       5679999999875543 


Q ss_pred             CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCC
Q 009612          322 KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGP  401 (531)
Q Consensus       322 ~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~  401 (531)
                      +++++++++++..+++||+|||+++++|++++|++||++|+++|+|++               |++|||+|+||++|++ 
T Consensus       240 ~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~~-  303 (421)
T 3lxh_A          240 PMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL---------------KLQRGVEELFRRFAVV-  303 (421)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH---------------HHHHHHHHHHHHCCCB-
T ss_pred             CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------HHHHHHHHHHHhcCcc-
Confidence            699999999999999999999999999999999999999999999997               8999999999999999 


Q ss_pred             CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHH
Q 009612          402 LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNL  481 (531)
Q Consensus       402 ~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  481 (531)
                      ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||          ...++|||.|+|.|+|++|
T Consensus       304 ~~--~R~~~~d~~l~-G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~~l  370 (421)
T 3lxh_A          304 SD--ARYVVSDMEFH-GTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR----------DVTHSTFAQGPHRCAGMHL  370 (421)
T ss_dssp             EE--EEEECSCEEET-TEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHH
T ss_pred             CC--ceeeCCCeeEC-CEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC----------CCCCCCCCCcCccCcCHHH
Confidence            66  89999999998 99999999999999999999999999999999995          2369999999999999999


Q ss_pred             HHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          482 GLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       482 a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      |++|++++++.|+++| ++++.++.+..+..  +.+. ....++|+++||.
T Consensus       371 A~~e~~~~l~~ll~~fp~~~l~~~~~~~~~~--~~~~-~~~~lpv~~~p~~  418 (421)
T 3lxh_A          371 ARLEVTVMLQEWLARIPEFRLKDRAVPIYHS--GIVA-AVENIPLEWEPQR  418 (421)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEECTTCCCEEEC--SSBC-EEECCEEECCCC-
T ss_pred             HHHHHHHHHHHHHHhCCCcEECCCCCceecc--cccc-CceeeeEEEeccc
Confidence            9999999999999999 99998765544432  3443 3477999999874


No 56 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=2e-59  Score=472.55  Aligned_cols=411  Identities=14%  Similarity=0.184  Sum_probs=296.3

Q ss_pred             CCCCCCCCCCCCCcccccccccC----CC-chhHHHHHHHHhcCCCc-eEEEEcCCCcc-------EEEecCHHHHHHhh
Q 009612           63 QRGSVAIPGPKGVPLFGSLFTLS----RG-LAHRTLAAMAWSRGNTQ-LMAFSLGGSTP-------VVVASDPHTAKEIL  129 (531)
Q Consensus        63 ~~~~~~~PgP~~~p~iG~~~~~~----~~-~~~~~~~~~~~ky~~g~-i~~~~lg~~~~-------~vvv~dp~~i~~vl  129 (531)
                      ..+++.+|||+++|++|+++.+.    .. +++.++.++++||  |+ ||+++++ +.+       .|++.|.+..+.++
T Consensus         5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~ky--G~~vf~~~~~-~~~~v~~~~~~v~~~~~~~~~~~~   81 (473)
T 3dan_A            5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKY--QSTVFRANMP-PGPFVSSNPKVIVLLDAKSFPILF   81 (473)
T ss_dssp             GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHH--TCSEEEEECT-TCTTTCSCCEEEEECSTTTGGGGG
T ss_pred             CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHh--CCeEEEecCC-CCCccccCCceEEeecccccceec
Confidence            45688999999999999998753    24 7899999999999  78 9999986 443       34445555544555


Q ss_pred             cCCCCCCC----Ccchhhhhhhcc--cceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCC
Q 009612          130 TSPHFADR----PIKQSAECLMFS--RAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHN  203 (531)
Q Consensus       130 ~~~~~~~~----~~~~~~~~~~~g--~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  203 (531)
                      ......+.    ...........|  ...++..+|+.|+++|+.+ .+.|++ .++.+.+.+++.++++++.+.....++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~  159 (473)
T 3dan_A           82 DVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKN-SSNRVIPQFETTYTELFEGLEAELAKN  159 (473)
T ss_dssp             CTTTEECSSCTTSSSCCCGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcceeccccccccccCCccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            42111111    111111122222  2233556899999999999 778988 489999999999999999998654445


Q ss_pred             CccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhh-hhhhcChhhHHH----HHH
Q 009612          204 GFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPW-MSLFYDPFRIHE----RCL  278 (531)
Q Consensus       204 ~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~l~~~~~~~~----~~~  278 (531)
                      +++|+.+++..+++++++.++||.+++..+..+....+.+.+..... ..  .....+|. +..+  .....+    ...
T Consensus       160 ~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~p--~~~~~lp~~~~~~--~~~~~~~~~~~~~  234 (473)
T 3dan_A          160 GKAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWVLFNL-AP--TLDLGLPWFLQEP--LLHTFRLPAFLIK  234 (473)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHH-GG--GCCCSCCHHHHHH--HHSSSCCCGGGTH
T ss_pred             CcccHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHHHHhc-cc--hhhhcchHHHHHH--HhhhccchHhhhh
Confidence            78999999999999999999999998763322233333332221110 00  00001121 1100  000000    000


Q ss_pred             hHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHH-HhhcccHHHHHHHHHHHHhh-
Q 009612          279 KLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMI-FRGTDTTALLTEWIMAELVL-  356 (531)
Q Consensus       279 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~-~AG~~tta~~l~~~l~~L~~-  356 (531)
                      +..+.+.+.+                   .|+++.+++..++.+++++|+.++++.++ +||++||+++++|++++|++ 
T Consensus       235 ~~~~~~~~~~-------------------~~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~  295 (473)
T 3dan_A          235 STYNKLYDYF-------------------QSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLA  295 (473)
T ss_dssp             HHHHHHHHHH-------------------HHHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hchhhhHHHH-------------------HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhc
Confidence            1111111111                   23444455544445799999999886666 88889999999999999999 


Q ss_pred             CHHHHHHHHHHHHhh--c---CCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceee----cCCeeeCCCCEE
Q 009612          357 NQKVQAKLHAELQAV--N---SKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQL----SNGMLIPANTTA  427 (531)
Q Consensus       357 ~P~~~~~l~~Ei~~~--~---~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i----~~g~~ip~g~~v  427 (531)
                      ||++|++||+|++++  .   +.++++++++||||+|||+|+||++|+++..  .|.+++|+++    + ||.||||+.|
T Consensus       296 ~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~--~r~~~~d~~l~~~~~-g~~Ip~G~~v  372 (473)
T 3dan_A          296 GENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQ--YGKAKSNFTIESHDA-TFEVKKGEML  372 (473)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEEECSSC-EEEECTTCEE
T ss_pred             CHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccc--cccccCCcEeecCCC-ceEeCCCCEE
Confidence            899999999999988  4   5799999999999999999999999999987  6779999999    7 9999999999


Q ss_pred             EechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCC---------CCCCCcchHHHHHHHHHHHHHHHhhce
Q 009612          428 MVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGA---------GRRVCPGKNLGLATVSLWVAQLVKVYI  498 (531)
Q Consensus       428 ~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~---------G~r~C~G~~~a~~e~~~~l~~ll~~f~  498 (531)
                      +++.+++||||++|+||++|||+||++++.    ....++|||.         |+|.|+|++||++|++++++.|+++|+
T Consensus       373 ~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~  448 (473)
T 3dan_A          373 FGYQPFATKDPKVFDRPEEYVPDRFVGDGE----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD  448 (473)
T ss_dssp             EEEHHHHTTCTTTSSSTTSCCTTTTSGGGG----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEE
T ss_pred             EechHHhhCCchhcCCcccCCccccCCCcc----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999998521    1223455555         559999999999999999999999999


Q ss_pred             eeeCCCCCCCc
Q 009612          499 WVPDVASPADL  509 (531)
Q Consensus       499 ~~~~~~~~~~~  509 (531)
                      +...++.+.++
T Consensus       449 ~~~~~~~~~~~  459 (473)
T 3dan_A          449 SFEIELGESPL  459 (473)
T ss_dssp             EEEEEEECCSS
T ss_pred             eEEccCCcccc
Confidence            87665444443


No 57 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=2.7e-59  Score=463.60  Aligned_cols=391  Identities=17%  Similarity=0.135  Sum_probs=303.6

Q ss_pred             CCCCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEE--------cCCCccEEEecCHHHHHHhhcC-CCCCC
Q 009612           66 SVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFS--------LGGSTPVVVASDPHTAKEILTS-PHFAD  136 (531)
Q Consensus        66 ~~~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~--------lg~~~~~vvv~dp~~i~~vl~~-~~~~~  136 (531)
                      ...||+|.++++++....-. ++++..+.++ ++|  |||+++.        +| +.++++|+|++.+++|+++ ..|++
T Consensus        17 ~~~p~~~~~~~~~~~~~~~~-~~p~~~~~~l-r~~--gPv~~~~~~~g~~~~lG-~~~~~vv~~~~~v~~vl~~~~~fs~   91 (433)
T 3ivy_A           17 VPSPNLPPGFDFTDPAIYAE-RLPVAEFAEL-RSA--APIWWNGQDPGKGGGFH-DGGFWAITKLNDVKEISRHSDVFSS   91 (433)
T ss_dssp             ---CCCCTTCCTTCHHHHTT-CCCHHHHHHH-HHH--CSEEEEECCTTCSTTCC-SSEEEEECSHHHHHHHHHCTTTEES
T ss_pred             cCCCCCCCCCCCCCHHHhhc-CCccHHHHHH-Hhc--CCEEecccccccccccC-CCCEEEEecHHHHHHHHcChhhccC
Confidence            45667777777766554332 5789999999 789  8999998        45 5789999999999999986 45776


Q ss_pred             CCcchhh---------hhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccc
Q 009612          137 RPIKQSA---------ECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVS  207 (531)
Q Consensus       137 ~~~~~~~---------~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd  207 (531)
                      ++.....         .....+.+++ ..+|+.|+++||.+ .+.|++..++.+.+.+.++++.+++.+..    ++++|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d  165 (433)
T 3ivy_A           92 YENGVIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAA----AGSGD  165 (433)
T ss_dssp             TTTCSCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHH----HCEEE
T ss_pred             CcccccccccccccccccccccCCcc-ccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh----CCCee
Confidence            6543221         1112345554 55999999999999 88999999999999999999999999974    25689


Q ss_pred             hHHHH-HHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHH
Q 009612          208 LRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKN  286 (531)
Q Consensus       208 l~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~  286 (531)
                      +...+ ..+++++++.+ ||.+.+      ....+.+....+   . .    ...|....        .+..++.+.+.+
T Consensus       166 ~~~~~~~~~~~~vi~~l-~G~~~~------~~~~~~~~~~~~---~-~----~~~p~~~~--------~~~~~~~~~~~~  222 (433)
T 3ivy_A          166 FVEQVSCELPLQAIAGL-LGVPQE------DRGKLFHWSNEM---T-G----NEDPEYAH--------IDPKASSAELIG  222 (433)
T ss_dssp             HHHHTTSHHHHHHHHHH-HTCCHH------HHHHHHHHHTTC---S-C----CCCGGGTT--------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-cCCCHH------HHHHHHHHHHHH---h-c----cCCchhhh--------HHHHHHHHHHHH
Confidence            99888 99999999996 886421      222332222111   1 1    11222111        134466777888


Q ss_pred             HHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHH
Q 009612          287 FVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLH  365 (531)
Q Consensus       287 ~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~  365 (531)
                      ++.+.++++++.       ..+|+++.|++...++ +++++|+.+++..+++||+|||+++++|++++|++||++|++++
T Consensus       223 ~~~~~i~~r~~~-------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~  295 (433)
T 3ivy_A          223 YAMKMAEEKAKN-------PADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK  295 (433)
T ss_dssp             HHHHHHHHC--------------CHHHHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHHHHHHHHhcC-------CCCcHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence            888888876543       4679999999876543 69999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCC
Q 009612          366 AELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPH  445 (531)
Q Consensus       366 ~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~  445 (531)
                      +|++                 +|||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||+
T Consensus       296 ~E~~-----------------~a~i~E~LRl~p~~~~~--~R~~~~d~~l~-G~~Ip~G~~V~~~~~~~~rdp~~f~dp~  355 (433)
T 3ivy_A          296 KVRP-----------------ETAADEIVRWATPVTAF--QRTALRDYELS-GVQIKKGQRVVMFYRSANFDEEVFQDPF  355 (433)
T ss_dssp             HHCC-----------------TTHHHHHHHHHCSBCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTSSSTT
T ss_pred             hCcc-----------------cchhHHHhhhCcchhce--eeEECCCEEEC-CEEECCCCEEEEChhhhcCCchhCCCcC
Confidence            9974                 68999999999999986  89999999999 9999999999999999999999999999


Q ss_pred             CCCCCccccCCcCCCCCCcccccCC-CCCCCCcchHHHHHHHHHHHHHHHhhce-eeeCCCCCCCccccccccccccCce
Q 009612          446 VFKPERFLEADVDVRGGDLRLAPFG-AGRRVCPGKNLGLATVSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNPL  523 (531)
Q Consensus       446 ~F~P~R~l~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~  523 (531)
                      +|+||||..          .++||| .|+|.|+|++||++|++++++.|+++|+ ++++++  ....  .+........+
T Consensus       356 ~F~p~R~~~----------~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~--~~~~~~g~~~l  421 (433)
T 3ivy_A          356 TFNILRNPN----------PHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISA--PERL--RSGWLNGIKHW  421 (433)
T ss_dssp             SCCTTCCSC----------CCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--CEEC--CCSSBCCEEEC
T ss_pred             ccCCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCC--Ccee--ccCcccCccee
Confidence            999999932          589999 9999999999999999999999999999 999753  2221  22333344789


Q ss_pred             eEEEeeCC
Q 009612          524 RAVAVDRN  531 (531)
Q Consensus       524 ~v~~~~r~  531 (531)
                      +|++++|.
T Consensus       422 pv~~~~R~  429 (433)
T 3ivy_A          422 QVDYTGRC  429 (433)
T ss_dssp             EEESCC--
T ss_pred             EEEEeccc
Confidence            99999884


No 58 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=6.1e-60  Score=468.64  Aligned_cols=384  Identities=17%  Similarity=0.189  Sum_probs=294.3

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhhhhhcccceecCCCChhHHHHH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLR  165 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R  165 (531)
                      .+++.++.++ ++|  |||+++..+ +  +++|+||+.+++|+++ ..|++++...... ...+.+.++..+|+.|+++|
T Consensus        53 ~~p~~~~~~l-r~~--gpv~~~~~~-~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~-~~~~~~~l~~~dg~~h~~~R  125 (441)
T 3nc3_A           53 NNPYAYFSQL-REE--DPVHYEESI-D--SYFISRYHDVRYILQHPDIFTTKSLVERAE-PVMRGPVLAQMHGKEHSAKR  125 (441)
T ss_dssp             HCGGGTHHHH-HHH--CSEEEETTT-T--EEEECCHHHHHHHHHCTTTEECCCTTSCCC-CSCC-------------CCH
T ss_pred             cChHHHHHHH-Hhc--CCEEEeCCC-C--EEEEcCHHHHHHHhcCcccccccccccccc-cccCCCccccCCcHHHHHHH
Confidence            3677778776 589  899887666 4  7999999999999986 4466665433222 23344433556999999999


Q ss_pred             HHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHH-HHHHHHHHHHHHHhccccccCCCchhHHHHHHH
Q 009612          166 RIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKH-LQLAALNNIMGSVFGVRYDIDRDSKSLQELTEM  244 (531)
Q Consensus       166 r~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~  244 (531)
                      |.+ .+.|++..++.+.+.+.++++++++.+..    ++++|+... ...+++++++. +||.+.+      ....+...
T Consensus       126 r~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~------~~~~~~~~  193 (441)
T 3nc3_A          126 RIV-VRSFIGDALDHLSPLIKQNAENLLAPYLE----RGKSDLVNDFGKTFAVCVTMD-MLGLDKR------DHEKISEW  193 (441)
T ss_dssp             HHH-HHHHHHTHHHHHHHHHHHHHHHHHTTTTT----TTEEECCCCCHHHHHHHHHHH-HTTCCGG------GHHHHHHH
T ss_pred             HHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHHHH-HcCCCHH------HHHHHHHH
Confidence            999 88999999999999999999999998753    457887544 45689999998 5897653      23344444


Q ss_pred             HHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcC-CCC
Q 009612          245 VREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGE-EKL  323 (531)
Q Consensus       245 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~l  323 (531)
                      ...+.........            .....+...+..+.+.+++.+.|+++++.       ..+|+++.|++...+ +.+
T Consensus       194 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~Dll~~Ll~~~~~~~~l  254 (441)
T 3nc3_A          194 HSGVADFITSISQ------------SPEARAHSLWCSEQLSQYLMPVIKERRVN-------PGSDLISILCTSEYEGMAL  254 (441)
T ss_dssp             HHHHHHHHHCSCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHCC------CC
T ss_pred             HHHHHHhcccccC------------ChHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccCCCC
Confidence            4444433221110            11123455677788899999999887652       567999999987643 369


Q ss_pred             CHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCC
Q 009612          324 SDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLL  403 (531)
Q Consensus       324 ~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~  403 (531)
                      +++|+++++..+++||+|||+++++|++++|++||++|+++++|+               +|++|||+|+||++|+++..
T Consensus       255 s~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------~~l~a~i~E~LRl~pp~~~~  319 (441)
T 3nc3_A          255 SDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR---------------SLVPRAIAETLRYKPPVQLI  319 (441)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG---------------GGHHHHHHHHHHHSCSBCEE
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------HHHHHHHHHhhhcCCcccCc
Confidence            999999999999999999999999999999999999999999986               49999999999999999986


Q ss_pred             ccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHH
Q 009612          404 SWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGL  483 (531)
Q Consensus       404 ~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  483 (531)
                        +|.+++|++++ ||.||||+.|+++.+++||||++|+||++||||||++++.........++|||.|+|.|+|++||+
T Consensus       320 --~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~  396 (441)
T 3nc3_A          320 --PRQLSQDTVVG-GMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAK  396 (441)
T ss_dssp             --EEEESSCEESS-SCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHH
T ss_pred             --cEEECCCEEEC-CEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHH
Confidence              89999999999 999999999999999999999999999999999998654332223567999999999999999999


Q ss_pred             HHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          484 ATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       484 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      +|++++++.|+++| +++++++ +..+  ..+..++....++|+++|
T Consensus       397 ~e~~~~l~~ll~~f~~~~l~~~-~~~~--~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          397 NEIEIVANIVLDKMRNIRLEED-FCYA--ESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHHHHHHHSTTCEECTT-CCCC--EECSSBCEESCCEEECC-
T ss_pred             HHHHHHHHHHHHhCcccEECCC-Cccc--ccCccccCcceeEEEEec
Confidence            99999999999999 9999865 2333  234566677899999875


No 59 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=9.8e-59  Score=461.58  Aligned_cols=382  Identities=17%  Similarity=0.175  Sum_probs=301.0

Q ss_pred             hhHHHHHHHHhcCCCceE--EEE-cCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhhh---------h-----hccc
Q 009612           89 AHRTLAAMAWSRGNTQLM--AFS-LGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAEC---------L-----MFSR  150 (531)
Q Consensus        89 ~~~~~~~~~~ky~~g~i~--~~~-lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~---------~-----~~g~  150 (531)
                      ++..+.++ ++|  |||+  +++ +| +.++++|++++.+++|+++ ..|++++.......         .     ..+.
T Consensus        47 p~~~~~~l-r~~--gPV~~~~~~~~g-~~~~~vvt~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~  122 (450)
T 3tkt_A           47 LLDRFDAL-RAE--APVAKVVAPDDE-HEPFWLVSSFDGVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVE  122 (450)
T ss_dssp             HHHHHHHH-HHH--CSEEEECCTTCS-SCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSC
T ss_pred             chHHHHHH-Hhc--CCeecccccCCC-CCCEEEEecHHHHHHHHhCcccccCCCcccccccccccccccccccccccccc
Confidence            78888888 678  8998  887 66 7899999999999999986 55777654322110         0     0223


Q ss_pred             ceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhcccc
Q 009612          151 AIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRY  229 (531)
Q Consensus       151 ~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~  229 (531)
                      ++ +..+|+.|+++||.+ .+.|++++++.+.+.+.++++++++.+.+.   ++++|+...+ ..+++++|+.+ ||.+.
T Consensus       123 ~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~---~~~~dl~~~~~~~~~~~vi~~l-~G~~~  196 (450)
T 3tkt_A          123 SL-VQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLGA---GEEGDFMALVAAPYPLHVVMQI-LGVPP  196 (450)
T ss_dssp             CG-GGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHHT---CSEEEHHHHTTTHHHHHHHHHH-TTCCG
T ss_pred             Cc-ccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEeeHHHHHHHHHHHHHHHH-cCCCh
Confidence            44 455999999999999 789999999999999999999999999752   5789998888 68999999985 89764


Q ss_pred             ccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCcc
Q 009612          230 DIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNAD  309 (531)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d  309 (531)
                      +      ....+.+....++...    .....+++.++.......++..++...+.+++.+.++++++.       ..+|
T Consensus       197 ~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d  259 (450)
T 3tkt_A          197 E------DEPKMLFLTQQMFGGQ----DEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN-------PTDD  259 (450)
T ss_dssp             G------GHHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSS
T ss_pred             h------HHHHHHHHHHHHhccc----cchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCC
Confidence            3      2334444433332211    111222222221112334667778888999999999988763       4679


Q ss_pred             HHHHHHhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHH
Q 009612          310 FVDVLLSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQA  388 (531)
Q Consensus       310 ~~~~ll~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a  388 (531)
                      +++.|+++..++ +++++|+.+++..+++||+|||+++++|++++|++||++|+++|+|++               |++|
T Consensus       260 ll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a  324 (450)
T 3tkt_A          260 VATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN---------------LLPG  324 (450)
T ss_dssp             HHHHHHTCEETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHH
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH---------------HHHH
Confidence            999999876543 599999999999999999999999999999999999999999999974               8999


Q ss_pred             HHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCccccc
Q 009612          389 VVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAP  468 (531)
Q Consensus       389 ~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~  468 (531)
                      ||+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++||||||.          ..++|
T Consensus       325 ~i~E~LRl~pp~~~~--~R~~~~d~~l~-G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~----------~~~l~  391 (450)
T 3tkt_A          325 IVEEAIRWTTPVQHF--MRTAATDTELC-GQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA----------NRHLA  391 (450)
T ss_dssp             HHHHHHHHHCSBCEE--EEEESSSEEET-TEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----------TCSST
T ss_pred             HHHHHHHhCCCccCc--ceeeCCCeeEC-CEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----------CCCCC
Confidence            999999999999965  89999999999 999999999999999999999999999999999952          25899


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHhhce-eeeCCCCCCCccccccccccccCceeEEEee
Q 009612          469 FGAGRRVCPGKNLGLATVSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       469 Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      ||.|+|.|+|++||++|++++++.|+++|+ +++.+  +..+..  +...+....++|++++
T Consensus       392 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~--~~~~~~--~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          392 FGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAG--EPKRVN--STFVGGFKSLPMRWKA  449 (450)
T ss_dssp             TCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESS--CCEECC--CSSBCCEEECEEEEEE
T ss_pred             CCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCC--Cccccc--CcccCCcccceEEEec
Confidence            999999999999999999999999999998 66653  223222  2333445778888876


No 60 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=2.4e-58  Score=455.05  Aligned_cols=350  Identities=18%  Similarity=0.212  Sum_probs=291.8

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcc---hhhhhh-----hcccceecCCCC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIK---QSAECL-----MFSRAIGFAPNG  158 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~---~~~~~~-----~~g~~~~~~~~g  158 (531)
                      .+++..+.+|+++   |||++++++.+.++++|+|++.+++|+++..|++++..   ......     ..+.+++ ..+|
T Consensus        29 ~dp~~~~~~l~~~---Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg  104 (417)
T 3tyw_A           29 FAAPAEYAALRTD---DPVARVTLPTRREAWVVTRYDDVRELLSDPRVSADIRRPGFPALGEGEQEAGARFRPFI-RTDA  104 (417)
T ss_dssp             TSCCTHHHHHHHT---CTEEEEECTTSCEEEEECCHHHHHHHHHCTTEECCSSSTTCCCSSTTTSTTSSSCCCGG-GCCH
T ss_pred             cCchHHHHHHHhh---CCeeeeecCCCCCeEEEcCHHHHHHHHcCCCcccCCccccccccccccccccccccchh-hcCC
Confidence            6889999999876   79999998734789999999999999987677665322   111111     1245554 4589


Q ss_pred             hhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchh
Q 009612          159 TYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKS  237 (531)
Q Consensus       159 ~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~  237 (531)
                      +.|+++||.+ .+.|++++++.+.+.+.++++++++.+..   .++++|+...+ ..++.++++.+ ||.+++..+   .
T Consensus       105 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~---~  176 (417)
T 3tyw_A          105 PEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDLE---F  176 (417)
T ss_dssp             HHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTT---H
T ss_pred             cHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHHH---H
Confidence            9999999999 78999999999999999999999999976   35679999988 57899999987 998876322   2


Q ss_pred             HHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhh
Q 009612          238 LQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSL  317 (531)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~  317 (531)
                      ...+   ........         +          ..++..++...+.+++.+.++++++.       ...|+++.+++.
T Consensus       177 ~~~~---~~~~~~~~---------~----------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~  227 (417)
T 3tyw_A          177 FRDV---TRISGSRN---------S----------TAEQVSEALGGLFGLLGGLVAERREE-------PRDDLISKLVTD  227 (417)
T ss_dssp             HHHH---HHHHHSSS---------S----------CTTHHHHHHHHHHHHHHHHHHHHHSS-------CCSSHHHHHHHH
T ss_pred             HHHH---HHHHhccc---------C----------CHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHHHHh
Confidence            3222   22221110         0          11345567778888999999887653       467999999987


Q ss_pred             hcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhC
Q 009612          318 EGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRV  396 (531)
Q Consensus       318 ~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl  396 (531)
                      ..++ +++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++               |++|||+|+||+
T Consensus       228 ~~~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl  292 (417)
T 3tyw_A          228 HLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD---------------LMPAAVDELLRV  292 (417)
T ss_dssp             TTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG---------------GHHHHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------HHHHHHHHHHHh
Confidence            6554 699999999999999999999999999999999999999999999976               899999999999


Q ss_pred             CCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCC
Q 009612          397 HPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVC  476 (531)
Q Consensus       397 ~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C  476 (531)
                      +|+++... +|++++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|
T Consensus       293 ~p~~~~~~-~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C  360 (417)
T 3tyw_A          293 LSVADSIP-LRVAAEDIELS-GRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD----------NHHVAFGYGVHQC  360 (417)
T ss_dssp             HCSCTTCC-EEEESSCEECS-SCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC----------CCCCTTCCSTTCC
T ss_pred             ccccccCc-eeEeCCCeEEC-CEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC----------CCCCCCCCCCccC
Confidence            99999732 89999999999 999999999999999999999999999999999993          2589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-eeeeCCC
Q 009612          477 PGKNLGLATVSLWVAQLVKVY-IWVPDVA  504 (531)
Q Consensus       477 ~G~~~a~~e~~~~l~~ll~~f-~~~~~~~  504 (531)
                      +|++||++|++++++.|+++| +++++.+
T Consensus       361 ~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          361 VGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            999999999999999999999 9999854


No 61 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=3.2e-59  Score=459.93  Aligned_cols=370  Identities=15%  Similarity=0.126  Sum_probs=297.0

Q ss_pred             CchhHHHHHHHHhcCCCceE-----EEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcch-hhh--hh---hcccceec
Q 009612           87 GLAHRTLAAMAWSRGNTQLM-----AFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQ-SAE--CL---MFSRAIGF  154 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~-----~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~-~~~--~~---~~g~~~~~  154 (531)
                      .+++..+.+++ +|  |||+     ++++   .++++|+|++.+++|+.+ ..|++++... ...  ..   ..+.++++
T Consensus        25 ~~p~~~~~~l~-~~--Gpv~~~~~~~~~~---~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~   98 (414)
T 2uuq_A           25 PNPWPMYRALR-DH--DPVHHVVPPQRPE---YDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVM   98 (414)
T ss_dssp             TCCHHHHHHHH-HH--CSEEEECCTTCGG---GCEEEECSHHHHHHHHHCTTTEESTTCSSSCTTHHHHHTCSSSCCGGG
T ss_pred             cCchHHHHHHH-hc--CCEEcccccccCC---CCEEEEcCHHHHHHHHcCchhccCCCCcccccCccccccccccccccc
Confidence            47888898885 78  8997     5544   468999999999999986 4577765432 111  11   23566655


Q ss_pred             CCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchH-HHHHHHHHHHHHHHHhccccccCC
Q 009612          155 APNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLR-KHLQLAALNNIMGSVFGVRYDIDR  233 (531)
Q Consensus       155 ~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~~~  233 (531)
                      . +|+.|+++||.+ .+.|++..++.+.+.+.++++++++++...    +++|+. +++..+++++++. +||.+++.  
T Consensus        99 ~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--  169 (414)
T 2uuq_A           99 Q-DPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRAN----GGGDIVTELFKPLPSMVVAH-YLGVPEED--  169 (414)
T ss_dssp             C-CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHT----TEEEHHHHTTTHHHHHHHHH-HTTCCGGG--
T ss_pred             C-CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccHHHHHHHHhHHHHHHH-HhCCCHHH--
Confidence            4 899999999999 789999999999999999999999999753    369997 5567999999998 69988752  


Q ss_pred             CchhHHHHHHHHHHHHHhhcccccccch-hhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHH
Q 009612          234 DSKSLQELTEMVREGFELLGAFNWSDYL-PWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVD  312 (531)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~  312 (531)
                          ...+......++..       ..+ |..          ++..++...+.+++.+.++++++.       ...|+++
T Consensus       170 ----~~~~~~~~~~~~~~-------~~~~p~~----------~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~  221 (414)
T 2uuq_A          170 ----WTQFDGWTQAIVAA-------NAVDGAT----------TGALDAVGSMMAYFTGLIERRRTE-------PADDAIS  221 (414)
T ss_dssp             ----HHHHHHHHHHHHHH-------HHC---------------CCHHHHHHHHHHHHHHHHHHTTS-------CCSSHHH
T ss_pred             ----HHHHHHHHHHHHhh-------cccCCch----------hHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHH
Confidence                22233333332221       011 210          123345667888888888877653       3579999


Q ss_pred             HHHhhhc--C-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHH
Q 009612          313 VLLSLEG--E-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAV  389 (531)
Q Consensus       313 ~ll~~~~--~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~  389 (531)
                      .+++...  + ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++||
T Consensus       222 ~ll~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~  286 (414)
T 2uuq_A          222 HLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPE---------------GIPDA  286 (414)
T ss_dssp             HHHHTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------GHHHH
T ss_pred             HHHhcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------HHHHH
Confidence            9998754  2 2489999999999999999999999999999999999999999999874               99999


Q ss_pred             HHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCC-CCCCCCCCCccccCCcCCCCCCccccc
Q 009612          390 VKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVW-EDPHVFKPERFLEADVDVRGGDLRLAP  468 (531)
Q Consensus       390 i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~  468 (531)
                      |+|+||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++| +||++|+||||..          .++|
T Consensus       287 i~E~lRl~p~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~~----------~~~~  353 (414)
T 2uuq_A          287 VEELLRLTSPVQGL--ARTTTRDVTIG-DTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPR----------NILT  353 (414)
T ss_dssp             HHHHHHHHCSBCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCCC----------SCCT
T ss_pred             HHHHHHhCCCcCCc--ceEECCCEEEC-CEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCCC----------CCcC
Confidence            99999999999965  89999999999 999999999999999999999999 9999999999852          4899


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          469 FGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       469 Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      ||.|+|.|+|++||++|++++++.|+++| ++++.+ .++.+.  .+.++++.++++|+++||
T Consensus       354 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~-~~~~~~--~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          354 FSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAE-SRIVWS--GGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             TCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECG-GGCEEC--CCSSBCCEEECEEEEC--
T ss_pred             CCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECC-CCcccc--ccccccCcceeEEEecCC
Confidence            99999999999999999999999999999 699973 233333  355667889999999998


No 62 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.1e-58  Score=455.17  Aligned_cols=367  Identities=14%  Similarity=0.166  Sum_probs=296.4

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhhh-hhcccceecCCCChhHHHH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAEC-LMFSRAIGFAPNGTYWRLL  164 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~g~~w~~~  164 (531)
                      .+++..+.+|+++   |||+++..+ +. .++|+|++.+++|+++ +.|++++....... ...+.++ +..+|+.|+++
T Consensus        24 ~~p~~~~~~l~~~---Gpv~~~~~~-~~-~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~-~~~~g~~h~~~   97 (396)
T 3oft_A           24 QDYFAAWKTLLDG---PGLVWSTAN-GG-HWIAARGDVVRELWGDAERLSSQCLAVTPGLGKVMQFIP-LQQDGAEHKAF   97 (396)
T ss_dssp             TCHHHHHHGGGGS---CSEEEECST-TS-EEEECSHHHHHHHHHCTTTEESTTCCSSTTHHHHHCCTT-TTCCHHHHHHH
T ss_pred             cChHHHHHHHHhc---CCeeeecCC-CC-EEEEcCHHHHHHHHcCcccccCCcccCCCccccccccCc-cccCCcHHHHH
Confidence            5899999999876   699988887 43 7999999999999985 56777663221111 1112333 55699999999


Q ss_pred             HHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchhHHHHHH
Q 009612          165 RRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQELTE  243 (531)
Q Consensus       165 Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~  243 (531)
                      ||.+ .+.|++..++.+.+.+.++++++++.+...    +.+|+...+ ..++.++++. +||.+.+      ....+..
T Consensus        98 R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~----~~~d~~~~~~~~~~~~v~~~-~~G~~~~------~~~~~~~  165 (396)
T 3oft_A           98 RTPV-MKGLASRFVVALEPKVQAVARKLMESLRPR----GSCDFVSDFAEILPLNIFLT-LIDVPLE------DRPRLRQ  165 (396)
T ss_dssp             HHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGGG----SEEEHHHHTTTTHHHHHHHH-HTTCCGG------GHHHHHH
T ss_pred             HHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhc----CCccHHHHHHHHHHHHHHHH-HcCCCHH------HHHHHHH
Confidence            9999 788999999999999999999999998642    468887666 4566666665 6886543      3344444


Q ss_pred             HHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC-C
Q 009612          244 MVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE-K  322 (531)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~  322 (531)
                      .....+....                    .++..+..+.+.+++.+.++++++.       ...|+++.+++..+++ +
T Consensus       166 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~~~~  218 (396)
T 3oft_A          166 LGVQLTRPDG--------------------SMTVEQLKQAADDYLWPFIEKRMAQ-------PGDDLFSRILSEPVGGRP  218 (396)
T ss_dssp             HHHHHHSCCS--------------------SCCHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSCBTTBC
T ss_pred             HHHHHhCCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhccCCC
Confidence            4443321100                    1234566778888999999888764       4679999999875544 6


Q ss_pred             CCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCC
Q 009612          323 LSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPL  402 (531)
Q Consensus       323 l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~  402 (531)
                      ++++++++++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||++|++ .
T Consensus       219 l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~~-~  282 (396)
T 3oft_A          219 WTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD---------------LIPAAADELMRRYPTV-A  282 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHHHHHHHHHHCCCB-E
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------hHHHHHHHHHHhcCcc-c
Confidence            99999999999999999999999999999999999999999999986               8999999999999999 6


Q ss_pred             CccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHH
Q 009612          403 LSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLG  482 (531)
Q Consensus       403 ~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a  482 (531)
                      .  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||++        +..++|||.|+|.|+|++||
T Consensus       283 ~--~R~~~~d~~~~-g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~~~FG~G~r~C~G~~lA  351 (396)
T 3oft_A          283 V--SRNAVADVDAD-GVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRHTTMGVGAHRCVGAGLA  351 (396)
T ss_dssp             E--EEEESSCEEET-TEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGSSTTCCGGGCCTTHHHH
T ss_pred             C--ceecCCCEEEC-CEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCcccCCCCCccCcCHHHH
Confidence            5  89999999999 9999999999999999999999999999999999973        34699999999999999999


Q ss_pred             HHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEe
Q 009612          483 LATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       483 ~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  528 (531)
                      ++|++++++.|+++| +++++++.+..+..  +... ....++|++.
T Consensus       352 ~~e~~~~l~~ll~~~~~~~l~~~~~~~~~~--~~~~-~~~~lpv~~~  395 (396)
T 3oft_A          352 RMEVIVFLREWLGGMPEFALAPDKAVTMKG--GNVG-ACTALPLVWR  395 (396)
T ss_dssp             HHHHHHHHHHHHHHSCCEEECSSSCCEEEC--SSBC-EEEECEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCceECCCCCceecc--cccc-CcccceEEeC
Confidence            999999999999999 99998765544432  2333 3366777764


No 63 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=9.3e-58  Score=452.14  Aligned_cols=376  Identities=15%  Similarity=0.168  Sum_probs=303.6

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcC------CCccEEEecCHHHHHHhhcC-CCCCCCCcc--h-hhhhh-hcccceecC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLG------GSTPVVVASDPHTAKEILTS-PHFADRPIK--Q-SAECL-MFSRAIGFA  155 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg------~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~--~-~~~~~-~~g~~~~~~  155 (531)
                      .+++..+.+|+ +|  |||++++++      .++++|+|+||+.+++|+.+ +.|++++..  . ..... ..+.++++.
T Consensus        44 ~~p~~~~~~l~-~~--Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~  120 (435)
T 2wm5_A           44 DVRDGAFATLR-RE--APISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVL  120 (435)
T ss_dssp             HHHHHHHHHHH-HH--CSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGC
T ss_pred             CChhHHHHHHH-hc--CCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccC
Confidence            36788899995 68  899988873      02478999999999999986 457777532  1 11111 125566554


Q ss_pred             CCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCC
Q 009612          156 PNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRD  234 (531)
Q Consensus       156 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~  234 (531)
                       +|+.|+++||.+ .+.|++.+++.+.+.+.++++++++.+.... +++++|+...+ ..+++++++.+ ||.+++.   
T Consensus       121 -dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~---  193 (435)
T 2wm5_A          121 -DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANN-PDRQADLVSELAGPLPLQIICDM-MGIPKAD---  193 (435)
T ss_dssp             -CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG---
T ss_pred             -CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCcEehHHHHHHHHHHHHHHHH-cCCCHHH---
Confidence             899999999999 7889999999999999999999999997642 34589999866 78999999999 9988752   


Q ss_pred             chhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHH
Q 009612          235 SKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVL  314 (531)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~l  314 (531)
                         ...+.+....++...        .|.+.      ...++..++.+.+.+++.+.|+++++.       ...|+++.|
T Consensus       194 ---~~~~~~~~~~~~~~~--------~p~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~l  249 (435)
T 2wm5_A          194 ---HQRIFHWTNVILGFG--------DPDLA------TDFDEFMQVSADIGAYATALAEDRRVN-------HHDDLTSSL  249 (435)
T ss_dssp             ---HHHHHHHHHHHHHTT--------CTTSC------CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH
T ss_pred             ---HHHHHHHHHHHhccC--------Ccchh------hhHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCHHHHH
Confidence               234444444443321        12210      112456677888999999999888763       457999999


Q ss_pred             HhhhcCC-CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHH
Q 009612          315 LSLEGEE-KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEA  393 (531)
Q Consensus       315 l~~~~~~-~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~Et  393 (531)
                      ++...++ .++++++..++..+++||+|||+.+++|++++|++||++|+++|+|++              +|++|||+|+
T Consensus       250 l~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------~~l~a~i~E~  315 (435)
T 2wm5_A          250 VEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD--------------GLAPTAVEEI  315 (435)
T ss_dssp             HHCCBTTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH--------------HHHHHHHHHH
T ss_pred             HhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH--------------hHHHHHHHHH
Confidence            9875443 599999999999999999999999999999999999999999999987              4899999999


Q ss_pred             hhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCC-C
Q 009612          394 LRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGA-G  472 (531)
Q Consensus       394 lRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~-G  472 (531)
                      ||++|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++||||||  +        ..++|||. |
T Consensus       316 lRl~p~~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~--------~~~lpFG~~G  382 (435)
T 2wm5_A          316 VRWASPVVYM--RRTLTQDIELR-GTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--P--------NPHLGFGGGG  382 (435)
T ss_dssp             HHHHCSBCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S--------CCCCTTCSSS
T ss_pred             HhhcCcccCc--ceEeCCCeeEC-CEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--C--------CCCCCCCCCC
Confidence            9999999965  89999999999 99999999999999999999999999999999994  1        25899999 9


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhce-eeeCCCCCCCccccccccccccCceeEEE
Q 009612          473 RRVCPGKNLGLATVSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       473 ~r~C~G~~~a~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      +|.|+|++||++|++++++.|+++|+ +++.+  +..+.  .+........++|++
T Consensus       383 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~--~~~~~--~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          383 AHFCLGANLARREIRVAFDELRRQMPDVVATE--EPARL--LSQFIHGIKTLPVTW  434 (435)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS--CCEEC--CCSSBCCEEECEEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHhCCccEECC--Ccccc--ccccccCccceeEEe
Confidence            99999999999999999999999997 99875  23332  233444557777765


No 64 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=1.6e-58  Score=452.89  Aligned_cols=365  Identities=17%  Similarity=0.182  Sum_probs=292.5

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEc-CCCccEEEecCHHHHHHhhcCCCCC-C-CCcc--hhhh----hhhcccceecCCC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSL-GGSTPVVVASDPHTAKEILTSPHFA-D-RPIK--QSAE----CLMFSRAIGFAPN  157 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~l-g~~~~~vvv~dp~~i~~vl~~~~~~-~-~~~~--~~~~----~~~~g~~~~~~~~  157 (531)
                      .+++..+.+| ++|  |||+++++ + +.++|+++|++.+++++.+..|+ + ++..  ....    ....+.++++.  
T Consensus        16 ~~p~~~~~~l-~~y--Gpv~~~~~~g-~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--   89 (396)
T 1n40_A           16 DRIPDAVAEL-RTR--EPIRKVRTIT-GAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNI--   89 (396)
T ss_dssp             SSCCHHHHHH-HHH--CSEEEEECTT-SCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred             cCccHHHHHH-HHh--CCeeEeecCC-CceEEEEecHHHHHHHHhCCCcccccCccccccccccccCCchhhhhhhhH--
Confidence            5789999999 999  89999997 7 88899999999999999976666 4 4321  1110    01124555443  


Q ss_pred             ChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHH-HHHHHHHHHHHhccccccCCCch
Q 009612          158 GTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQ-LAALNNIMGSVFGVRYDIDRDSK  236 (531)
Q Consensus       158 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~~~~~~  236 (531)
                        .|+++||.+ .+.|++. ++.+.+.+.++++++++.+...   ++++|+...+. .+++++++. +||.+++.     
T Consensus        90 --~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~---~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  156 (396)
T 1n40_A           90 --ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITE---GAPADLRNDFADPLATALHCK-VLGIPQED-----  156 (396)
T ss_dssp             --HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHH---CSCEETTTTTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred             --HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhc---CCCccHHHHHHHHhHHHHHHH-HhCCChhh-----
Confidence              899999999 7789999 9999999999999999999752   56899986664 799999998 89987641     


Q ss_pred             hHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHh
Q 009612          237 SLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLS  316 (531)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~  316 (531)
                       ..++.+.....+....      ..|        .   ++..++.+.+ +++.+.++      +.   ....|+++.+++
T Consensus       157 -~~~~~~~~~~~~~~~~------~~p--------~---~~~~~~~~~~-~~~~~~i~------~~---~~~~dll~~ll~  208 (396)
T 1n40_A          157 -GPKLFRSLSIAFMSSA------DPI--------P---AAKINWDRDI-EYMAGILE------NP---NITTGLMGELSR  208 (396)
T ss_dssp             -HHHHHHTHHHHTBCCS------SCC--------H---HHHHHHHHHH-HHHHHHHH------CT---TCCSHHHHHHHH
T ss_pred             -HHHHHHHHHHHhcccc------CCC--------H---HHHHHHHHHH-HHHHHHHh------CC---CCCCCHHHHHHH
Confidence             2334444333322110      011        1   3444556666 77777776      11   135799999998


Q ss_pred             hh-c--CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHH
Q 009612          317 LE-G--EEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEA  393 (531)
Q Consensus       317 ~~-~--~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~Et  393 (531)
                      .. +  +..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++               |++|||+|+
T Consensus       209 ~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~  273 (396)
T 1n40_A          209 LRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE---------------LIPAGVEEL  273 (396)
T ss_dssp             HHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------GHHHHHHHH
T ss_pred             hhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH---------------HHHHHHHHH
Confidence            75 2  34699999999999999999999999999999999999999999999964               899999999


Q ss_pred             hhCCCCCC-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCC
Q 009612          394 LRVHPPGP-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAG  472 (531)
Q Consensus       394 lRl~p~~~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G  472 (531)
                      ||++|+++ ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.+         ..++|||.|
T Consensus       274 lRl~p~~~~~~--~R~~~~d~~~~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------~~~~~FG~G  341 (396)
T 1n40_A          274 LRINLSFADGL--PRLATADIQVG-DVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP---------TSHLAFGRG  341 (396)
T ss_dssp             HHTCCCBCSCE--EEEESSCEEET-TEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---------TCSSTTCCG
T ss_pred             HhhCCCccccc--ceecCCCeeEC-CEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---------CCCCCCCCC
Confidence            99999999 55  89999999999 9999999999999999999999999999999999963         258999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEEE
Q 009612          473 RRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       473 ~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      +|.|+|++||++|++++++.|+++| ++++.++ .++.+  ..+...+..+.++|++
T Consensus       342 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~--~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          342 QHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVW--RTRFQRRIPERLPVLW  396 (396)
T ss_dssp             GGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCB--CCSBSBCCBSCCEEEC
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHhCccccccCCcccccc--ccccccCCcceeeeeC
Confidence            9999999999999999999999999 5998764 22333  3345566678888764


No 65 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=2.5e-58  Score=452.00  Aligned_cols=360  Identities=13%  Similarity=0.140  Sum_probs=286.4

Q ss_pred             HHHHhcCCCceEEEEcCCCc---cEEEecCHHHHHHhh-cCCCCCCCCc------chh---hhhhhcccceecCCCChhH
Q 009612           95 AMAWSRGNTQLMAFSLGGST---PVVVASDPHTAKEIL-TSPHFADRPI------KQS---AECLMFSRAIGFAPNGTYW  161 (531)
Q Consensus        95 ~~~~ky~~g~i~~~~lg~~~---~~vvv~dp~~i~~vl-~~~~~~~~~~------~~~---~~~~~~g~~~~~~~~g~~w  161 (531)
                      +|+ ++  |||++++++.+.   ++|+|+||+.+++|+ .+..|++++.      ...   ......+.++++ .+|+.|
T Consensus        21 ~l~-~~--Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~   96 (398)
T 1lfk_A           21 ELL-AA--GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPRELVGNLMD-YDPPEH   96 (398)
T ss_dssp             HHH-TS--CSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CCTTCGGG-CCTTHH
T ss_pred             HHH-hc--CCccccccCCCCcccceEEEecHHHHHHHHhhCcccccccccccccccCCcccccccccccCccc-cCCHHH
Confidence            354 44  799998875234   789999999999999 6666766654      111   111123455654 489999


Q ss_pred             HHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHH-HHHHHHHHHHhccccccCCCchhHHH
Q 009612          162 RLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQL-AALNNIMGSVFGVRYDIDRDSKSLQE  240 (531)
Q Consensus       162 ~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~vi~~~~fG~~~~~~~~~~~~~~  240 (531)
                      +++||.+ .+.|++.+++.+.+.+.++++++++.+..   .++++|+...+.. ++.++++. +||.+++.      ...
T Consensus        97 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~~  165 (398)
T 1lfk_A           97 TRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDD------RDM  165 (398)
T ss_dssp             HHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG------HHH
T ss_pred             HHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHH
Confidence            9999999 78899999999999999999999999974   2567999999987 88999987 69987642      223


Q ss_pred             HHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcC
Q 009612          241 LTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGE  320 (531)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~  320 (531)
                      +.+.....+..                   ....++..++.+.+.+++.+.|+++++.       ...|+++.+++.. +
T Consensus       166 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~-~  218 (398)
T 1lfk_A          166 FMKLCHGHLDA-------------------SLSQKRRAALGDKFSRYLLAMIARERKE-------PGEGMIGAVVAEY-G  218 (398)
T ss_dssp             HHHHHHHTTCT-------------------TSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHH-G
T ss_pred             HHHHHHHHHhc-------------------ccchHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhc-C
Confidence            33333222110                   0112455667788889999999887763       3569999999876 4


Q ss_pred             CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCC
Q 009612          321 EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPG  400 (531)
Q Consensus       321 ~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~  400 (531)
                      +.++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++               |++|||+|+||++|++
T Consensus       219 ~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~~  283 (398)
T 1lfk_A          219 DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ---------------SAQRAVDELIRYLTVP  283 (398)
T ss_dssp             GGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH---------------HHHHHHHHHHHHHCCB
T ss_pred             CCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------HHHHHHHHHHHhCccc
Confidence            5699999999999999999999999999999999999999999999986               8999999999999999


Q ss_pred             C-CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcch
Q 009612          401 P-LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGK  479 (531)
Q Consensus       401 ~-~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~  479 (531)
                      + ..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|+|+
T Consensus       284 ~~~~--~R~~~~d~~l~-G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~  350 (398)
T 1lfk_A          284 YSPT--PRIAREDLTLA-GQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------IPHVAFGHGVHHCLGA  350 (398)
T ss_dssp             SCCS--CEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------CCCCTTCCSTTSCTTH
T ss_pred             cccc--ceecCCCeeEC-CEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------CCCCCCCCCCCcCCCH
Confidence            9 45  89999999999 999999999999999999999999999999999983          2489999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-eeeeCCC-CCCCccccccccccccCceeEE
Q 009612          480 NLGLATVSLWVAQLVKVY-IWVPDVA-SPADLSEVLKLSCEMKNPLRAV  526 (531)
Q Consensus       480 ~~a~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~  526 (531)
                      +||++|++++++.|+++| ++++.++ .+..+  ..+...+....++|+
T Consensus       351 ~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~--~~~~~~~~~~~lpv~  397 (398)
T 1lfk_A          351 ALARLELRTVFTELWRRFPALRLADPAQDTEF--RLTTPAYGLTELMVA  397 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEESSTTCCCEE--ECSSSBCEEEECEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEeCCCCCcccc--ccCcCcCCcccceee
Confidence            999999999999999999 8998753 22333  333444455666665


No 66 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.6e-58  Score=454.34  Aligned_cols=370  Identities=16%  Similarity=0.175  Sum_probs=298.7

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCC-ccEEEecCHHHHHHhhcC-CCCCCCCcchhhhh---h-hc-ccceecCCCCh
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGS-TPVVVASDPHTAKEILTS-PHFADRPIKQSAEC---L-MF-SRAIGFAPNGT  159 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~-~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~---~-~~-g~~~~~~~~g~  159 (531)
                      ++++..+.++++ |  |||+++...++ .++++|++++.+++|+++ +.|++++.......   . .. +.++ +..+|+
T Consensus        37 ~dp~~~~~~lr~-~--gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l-~~~dg~  112 (415)
T 3mgx_A           37 LERHARWRELAA-E--DAMVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMM-VVSEHE  112 (415)
T ss_dssp             TTHHHHHHHHHH-H--TCCEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSG-GGCCHH
T ss_pred             CChhHHHHHHHh-c--CCEeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCc-cccCcH
Confidence            578999999986 8  89988863413 789999999999999986 45776654322110   0 01 3334 456999


Q ss_pred             hHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchhH
Q 009612          160 YWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSL  238 (531)
Q Consensus       160 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~  238 (531)
                      .|+++||.+ .+.|+++.++.+.+.+.++++++++.+..    ++++|+...+ ..+++++++. +||.+.+      ..
T Consensus       113 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~------~~  180 (415)
T 3mgx_A          113 QHRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPAE------DE  180 (415)
T ss_dssp             HHHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCGG------GH
T ss_pred             HHHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCHH------HH
Confidence            999999999 78999999999999999999999998753    3479999887 6799999998 5886532      23


Q ss_pred             HHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhh
Q 009612          239 QELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLE  318 (531)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~  318 (531)
                      ..+.+....+.....    ..+.|        .    ...++.+.+.+++.+.++++++.       ...|+++.+++..
T Consensus       181 ~~~~~~~~~~~~~~~----~~~~~--------~----~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~ll~~~  237 (415)
T 3mgx_A          181 DMLIDLTNHAFGGED----ELFDG--------M----TPRQAHTEILVYFDELITARRKE-------PGDDLVSTLVTDD  237 (415)
T ss_dssp             HHHHHHHHHHTSCCC--------C--------C----CHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCT
T ss_pred             HHHHHHHHHHHcccC----cccch--------H----HHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhCC
Confidence            444444444332111    01111        1    11256678888999999888764       4679999999865


Q ss_pred             cCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCC
Q 009612          319 GEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHP  398 (531)
Q Consensus       319 ~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p  398 (531)
                         +++++|+.+++..+++||+|||+++++|++++|++||++|+++++|+               ||++|||+|+||++|
T Consensus       238 ---~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------~~l~a~i~E~LRl~p  299 (415)
T 3mgx_A          238 ---DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS---------------ADVDTVVEEVLRWTS  299 (415)
T ss_dssp             ---TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS---------------SCHHHHHHHHHHHHC
T ss_pred             ---CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh---------------HhHHHHHHHHHHhcC
Confidence               69999999999999999999999999999999999999999999986               699999999999999


Q ss_pred             CCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcc
Q 009612          399 PGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPG  478 (531)
Q Consensus       399 ~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G  478 (531)
                      +++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++||||||.          ..++|||.|+|.|+|
T Consensus       300 p~~~~--~R~~~~d~~l~-G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------~~~l~FG~G~r~C~G  366 (415)
T 3mgx_A          300 PAMHV--LRVTTADVTIN-GRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------NRHITFGHGMHHCLG  366 (415)
T ss_dssp             CBCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCGGGCCTT
T ss_pred             ccccc--ceecCCCeeEC-CEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccCcC
Confidence            99976  89999999999 999999999999999999999999999999999973          258999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeC
Q 009612          479 KNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDR  530 (531)
Q Consensus       479 ~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  530 (531)
                      ++||++|++++++.|+++| +++++++  ..+  ..+...+....++|++++|
T Consensus       367 ~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~--~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          367 SALARIELSVVLRVLAERVSRVDLERE--PAW--LRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEECSC--CEE--CSCSSBCCEEECEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCccCCC--ccc--ccCCcccCceeeeEEEecC
Confidence            9999999999999999999 8998743  222  2234445568899999998


No 67 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=9.2e-58  Score=451.83  Aligned_cols=377  Identities=19%  Similarity=0.223  Sum_probs=300.0

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCC-CCCCcchhhhhh---------hcccceecCC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHF-ADRPIKQSAECL---------MFSRAIGFAP  156 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~-~~~~~~~~~~~~---------~~g~~~~~~~  156 (531)
                      .+++..+.++ ++|  |||+++.+|    +++|+|++.+++|+++..+ ++++........         ..+.+++ ..
T Consensus        29 ~~p~~~~~~l-r~~--gpv~~~~~g----~~vv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~  100 (418)
T 3r9b_A           29 ADPYPIYDRI-RRG--GPLALPEAN----LAVFSSFSDCDDVLRHPSSCSDRTKSTIFQRQLAAETQPRPQGPASFL-FL  100 (418)
T ss_dssp             TCCHHHHHHH-HHH--CCEEEGGGT----EEEECSHHHHHHHHHCTTEECCGGGCHHHHHHHC---------CCCGG-GC
T ss_pred             cCchHHHHHH-Hhc--CCEEECCCC----eEEEecHHHHHHHHcCcccccCcccccccccccccccccccccccchh-hc
Confidence            6889999988 588  899775443    7999999999999986444 444433222211         1234554 45


Q ss_pred             CChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCc
Q 009612          157 NGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDS  235 (531)
Q Consensus       157 ~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~  235 (531)
                      +|+.|+++||.+ .+.|+++.++.+.+.++++++.+++ +.    .++++|+...+ ..+++++++. +||.+.+.    
T Consensus       101 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----  169 (418)
T 3r9b_A          101 DPPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIED----  169 (418)
T ss_dssp             CTTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGGG----
T ss_pred             CCchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHHH----
Confidence            899999999999 7899999999999999999999999 74    23588987655 5899999999 89987642    


Q ss_pred             hhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHH
Q 009612          236 KSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLL  315 (531)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll  315 (531)
                        ...+.............      .+.+.++  +....++..++.+.+.+++.+.++++++.       ...|+++.++
T Consensus       170 --~~~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll  232 (418)
T 3r9b_A          170 --EPKFSRASALLAAALDP------FLALTGE--TSDLFDEQMKAGMWLRDYLRALIDERRRT-------PGEDLMSGLV  232 (418)
T ss_dssp             --HHHHHHHHHHHHHTTSC------HHHHHSS--CCTTHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSSHHHHHH
T ss_pred             --HHHHHHHHHHHHhhcCc------ccccccc--CHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHHHHH
Confidence              22333333333322211      1111222  23334667788888999999999887653       4679999999


Q ss_pred             hhhcC-CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHh
Q 009612          316 SLEGE-EKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEAL  394 (531)
Q Consensus       316 ~~~~~-~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~Etl  394 (531)
                      +..++ ++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+|
T Consensus       233 ~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~l  297 (418)
T 3r9b_A          233 AVEESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS---------------RASAVIEETM  297 (418)
T ss_dssp             HHHHHSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG---------------GHHHHHHHHH
T ss_pred             HhhhccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------hHHHHHHHHH
Confidence            87543 3699999999999999999999999999999999999999999999976               8999999999


Q ss_pred             hCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCC
Q 009612          395 RVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRR  474 (531)
Q Consensus       395 Rl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r  474 (531)
                      |++|+++..  .|.+++|++++ ||.||||+.|+++.+++||||++|+||++|||||+          ...++|||.|+|
T Consensus       298 Rl~p~~~~~--~R~~~~d~~l~-g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~FG~G~r  364 (418)
T 3r9b_A          298 RYDPPVQLV--SRYAGDDLTIG-THTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----------QIRHLGFGKGAH  364 (418)
T ss_dssp             HHSCSBCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGG
T ss_pred             HhCCccccc--eeEeCCCeEEC-CEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------CCCCcCCCCcCc
Confidence            999999987  89999999999 99999999999999999999999999999999992          235899999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          475 VCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       475 ~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      .|+|++||++|++++++.|+++| +++++++  ..+  ..+.++++.+.++|++.||.
T Consensus       365 ~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~--~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          365 FCLGAPLARLEATVALPALAARFPEARLSGE--PEY--KRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHCTTCEECSC--CEE--CSCSSBCCEEECEEEC----
T ss_pred             cCccHHHHHHHHHHHHHHHHHhCccceeCCC--Ccc--ccCCcccCcceeEEEecCCC
Confidence            99999999999999999999999 8998763  332  34567778899999999984


No 68 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=2.4e-57  Score=443.57  Aligned_cols=366  Identities=16%  Similarity=0.149  Sum_probs=297.4

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCC----ccEEEecCHHHHHHhhcC-CCCCCCCcchhhhhhhcccceecCCCChhH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGS----TPVVVASDPHTAKEILTS-PHFADRPIKQSAECLMFSRAIGFAPNGTYW  161 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~----~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w  161 (531)
                      .+++..+.++ ++|  |||++++++ +    .++|+|+||+.+++|+++ ..|++++..........+.+.++..+|+.|
T Consensus        12 ~~p~~~~~~l-r~y--Gpv~~~~~~-~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~   87 (384)
T 3oo3_A           12 LDPVPEFEEL-QKA--GPLHEYDTE-PGMDGRKQWLVTGHDEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDH   87 (384)
T ss_dssp             TEECHHHHHH-HHT--CSEECCCCC-------CEEEECCHHHHHHHHHCTTTEECSCCCC-----CCCTTCGGGCCTTHH
T ss_pred             cChhHHHHHH-Hhc--CCeeecccc-cccCCCCEEEEcCHHHHHHHHhCchhccCCccccccccccccccccccCCChhH
Confidence            6899999999 499  899999888 5    789999999999999975 578777665432221222334456699999


Q ss_pred             HHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHH
Q 009612          162 RLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQEL  241 (531)
Q Consensus       162 ~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~  241 (531)
                      +++||.+ .+.|++++++.+.+.+.++++.+++.+.+   .++++|+...+...+.+.+...+||.+.+.      ..++
T Consensus        88 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~------~~~~  157 (384)
T 3oo3_A           88 TRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDD------QAEL  157 (384)
T ss_dssp             HHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGG------HHHH
T ss_pred             HHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHH------HHHH
Confidence            9999999 78999999999999999999999999965   467899999999988888888899987642      2334


Q ss_pred             HHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC
Q 009612          242 TEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE  321 (531)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~  321 (531)
                      .+.+...+.   .                 ...++..+..+.+.+++.+.++++++.       ...|+++.+++. +++
T Consensus       158 ~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~d~l~~ll~~-~~~  209 (384)
T 3oo3_A          158 SRMIRESRE---S-----------------RLPRQRTLSGLGIVNYTKRLTSGKRRD-------PGDGMIGVIVRE-HGA  209 (384)
T ss_dssp             HHHHHHHHH---C-----------------SCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHH-HGG
T ss_pred             HHHHHHHhc---c-----------------CChHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHh-cCC
Confidence            444443332   0                 012345567788888999999887652       467999999987 345


Q ss_pred             CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCC
Q 009612          322 KLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGP  401 (531)
Q Consensus       322 ~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~  401 (531)
                      +++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++.               ++|||+|+||++|+++
T Consensus       210 ~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~---------------l~a~i~E~lRl~p~~~  274 (384)
T 3oo3_A          210 EISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL---------------IDSATEEVLRHASIVE  274 (384)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG---------------HHHHHHHHHHHHCSCS
T ss_pred             CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH---------------HHHHHHHHHHhCCccc
Confidence            6999999999999999999999999999999999999999999999873               8999999999999998


Q ss_pred             CCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHH
Q 009612          402 LLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNL  481 (531)
Q Consensus       402 ~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  481 (531)
                      ... +|.+++|++++ ||.||||+.|+++.+++||     +||++|+||||-          ..++|||.|+|.|+|++|
T Consensus       275 ~~~-~R~~~~d~~~~-g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~l  337 (384)
T 3oo3_A          275 APA-PRVALADVRMA-GRDIHAGDVLTCSMLATNR-----APGDRFDITREK----------ATHMAFGHGIHHCIGAPL  337 (384)
T ss_dssp             CCS-CEEESSCEEET-TEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC----------CCCCTTCCSTTSCTTHHH
T ss_pred             CCc-ceeeCCCEEEC-CEEECCCCEEEEehhhcCC-----CCcceeCCCCCC----------CCcCCCCCCCcCCCCHHH
Confidence            532 89999999998 9999999999999999999     999999999962          359999999999999999


Q ss_pred             HHHHHHHHHHHHHhhc-eeeeCCCC-CCCccccccccccccCceeEEE
Q 009612          482 GLATVSLWVAQLVKVY-IWVPDVAS-PADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       482 a~~e~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      |++|++++++.|+++| ++++.++. ++.+.+. +...+..+.++|++
T Consensus       338 A~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~-~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          338 ARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPG-RPAPFAVEELPLEW  384 (384)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEESSCGGGCCEECS-SSSCCEESCCEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCCeeCCCCccceeecc-cccccCcceeeeeC
Confidence            9999999999999999 99998652 2333320 34445557777753


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=7.9e-57  Score=444.24  Aligned_cols=376  Identities=13%  Similarity=0.105  Sum_probs=298.3

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCc---chh-------hhhhhcccceecC
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPI---KQS-------AECLMFSRAIGFA  155 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~---~~~-------~~~~~~g~~~~~~  155 (531)
                      .+++..+.+++++   |||+++..+++.++++|++++.+++|+++ ..|++++.   ...       ......+.++ +.
T Consensus        38 ~~p~~~~~~lr~~---gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~  113 (426)
T 3rwl_A           38 DSVGEYFKRLRKD---DPVHYCADSAFGPYWSITKYNDIMHVDTNHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNF-IA  113 (426)
T ss_dssp             TCHHHHHHHHHHH---CSEEEESCCTTCSEEEECSHHHHHHHHHCTTTEECCGGGTCSSSSCCC-------CCCCCG-GG
T ss_pred             CCccHHHHHHHhc---CCeeeccCCCCCCEEEEcCHHHHHHHHcCCcccccccccCCCCcccccccccccccccCcc-cc
Confidence            4688899998764   79998877435679999999999999986 45666542   110       0011122344 45


Q ss_pred             CCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCC
Q 009612          156 PNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRD  234 (531)
Q Consensus       156 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~  234 (531)
                      .+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++.+++.+.    .++++|+...+ ..++.++++. +||.+.+..  
T Consensus       114 ~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~--  185 (426)
T 3rwl_A          114 MDRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEER--  185 (426)
T ss_dssp             CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT--
T ss_pred             cCchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHHH--
Confidence            6999999999999 7899999999999999999999999873    45789988777 5788888875 899765322  


Q ss_pred             chhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHH
Q 009612          235 SKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVL  314 (531)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~l  314 (531)
                          ..+....+.......        +.      .....+...+...++.+++.+.++++++.      +...|+++.+
T Consensus       186 ----~~~~~~~~~~~~~~~--------~~------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~~dll~~l  241 (426)
T 3rwl_A          186 ----RKLTRWSDVTTAAPG--------GG------VVESWDQRKTELLECAAYFQVLWNERVNK------DPGNDLISML  241 (426)
T ss_dssp             ----HHHHHHHHHHTCCTT--------SS------SCSSHHHHHHHHHHHHHHHHHHHHHHHTS------CCCSSHHHHH
T ss_pred             ----HHHHHHHHHHHhccC--------cc------ccccHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCCHHHHH
Confidence                222222221111100        00      01122345566788888999998887322      2578999999


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHh
Q 009612          315 LSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEAL  394 (531)
Q Consensus       315 l~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~Etl  394 (531)
                      ++..++++++++|+++++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+|
T Consensus       242 l~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~---------------~l~a~i~E~L  306 (426)
T 3rwl_A          242 AHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA---------------LVETMVPEII  306 (426)
T ss_dssp             HHCGGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHHHHHHHH
T ss_pred             HhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------hHHHHHHHHH
Confidence            9987777799999999999999999999999999999999999999999999864               9999999999


Q ss_pred             hCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCC
Q 009612          395 RVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRR  474 (531)
Q Consensus       395 Rl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r  474 (531)
                      |++|+++..  +|++++|++++ ||.||||+.|+++.+++||||++|+||++|||+||.+         ..++|||.|+|
T Consensus       307 Rl~p~~~~~--~R~~~~d~~l~-G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~~l~FG~G~r  374 (426)
T 3rwl_A          307 RWQTPLAHM--RRTAIADSELG-GKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQHLSFGFGIH  374 (426)
T ss_dssp             HHHCSBCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TCCSTTCCSTT
T ss_pred             HhcCccccC--ceecCCCeEEC-CEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC---------CCccCCCCCCc
Confidence            999999986  89999999999 9999999999999999999999999999999999943         35899999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          475 VCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       475 ~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      .|+|++||++|++++++.|+++| ++++.++  ..+  ..+...+..+.++|+++|
T Consensus       375 ~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~--~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          375 RCVGNRLAEMQLRILWEEILTRFSRIEVMAE--PER--VRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             SCSSHHHHHHHHHHHHHHHHTTCSEEEECSC--CEE--CCCSSBCCEEECEEEEEC
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCccCeeCCC--Ccc--cccccccCcceeeEEEeC
Confidence            99999999999999999999999 9998753  222  223444556888898876


No 70 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=2e-56  Score=437.36  Aligned_cols=372  Identities=18%  Similarity=0.204  Sum_probs=294.8

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchhhhhh-hcccceecCCCChhHHHHH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQSAECL-MFSRAIGFAPNGTYWRLLR  165 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~~~-~~g~~~~~~~~g~~w~~~R  165 (531)
                      .+++..+.++++ +  |||+++..|    .+++++++.+++++++..|+.++........ ..+.++ +..+|+.|+++|
T Consensus        20 ~dp~~~~~~lr~-~--~pv~~~~~g----~~~v~~~~~v~~~l~d~~fs~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R   91 (394)
T 2wiy_A           20 NNPYPWYRRLQQ-D--HPVHKLEDG----TYLVSRYADVSHFAKLPIMSVEPGWADAGPWAVASDTA-LGSDPPHHTVLR   91 (394)
T ss_dssp             HCCHHHHHHHHH-H--CSEEECTTS----CEEECCHHHHHHHTTSTTEECHHHHHTCGGGGGGGGSG-GGCCTTHHHHHH
T ss_pred             cCccHHHHHHHh-c--CCeEEecCC----eEEEcCHHHHHHHHcCCCccccccccccccchhccccc-ccCCchHHHHHH
Confidence            367888888865 4  699765433    5899999999999987655544321111111 123444 556999999999


Q ss_pred             HHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHhccccccCCCchhHHHHHHHH
Q 009612          166 RIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMV  245 (531)
Q Consensus       166 r~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~  245 (531)
                      |.+ .+.|+++.++.+.+.+++.++++++.+.    .++++|+...+..+++++++..+||.+.+      +...+.+.+
T Consensus        92 ~~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~------~~~~~~~~~  160 (394)
T 2wiy_A           92 RQT-NKWFTPKLVDGWVRTTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPED------DADAVMEAM  160 (394)
T ss_dssp             HHH-HTTCSHHHHHHHTHHHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCC------CHHHHHHHH
T ss_pred             HHH-HhccCHHHHHHHHHHHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHh------HHHHHHHHH
Confidence            999 7899999999999999999999998774    35679999999999999999999998643      233344333


Q ss_pred             HHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCCCCCH
Q 009612          246 REGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEEKLSD  325 (531)
Q Consensus       246 ~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~  325 (531)
                      .......      ...|.       ....++..++...+.+++.++|+++++.       ..+|+++.|++..+++++++
T Consensus       161 ~~~~~~~------~~~p~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~Ll~~~~~~~ls~  220 (394)
T 2wiy_A          161 FEAMLMQ------SAEPA-------DGDVDRAAVAFGYLSARVAEMLEDKRVN-------PGDGLADSLLDAARAGEITE  220 (394)
T ss_dssp             HHHHGGG------SSSCC-------TTHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHHHTTSSCH
T ss_pred             HHHHHhc------cCCcc-------chHHHHHHHHHHHHHHHHHHHHHHhhcC-------CCCcHHHHHHHhhhcCCCCH
Confidence            2222110      01121       1112344556677888889999887653       45689999998766667999


Q ss_pred             HHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCCcc
Q 009612          326 DDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLLSW  405 (531)
Q Consensus       326 ~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~  405 (531)
                      +|+.+++..+++||+|||+++++|++++|++||++|+++++|++               |++|||+|+||++|+++..  
T Consensus       221 ~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------~l~a~i~E~LRl~pp~~~~--  283 (394)
T 2wiy_A          221 SEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES---------------ARAAIINEMVRMDPPQLSF--  283 (394)
T ss_dssp             HHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------GHHHHHHHHHHHSCSBCEE--
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH---------------hHHHHHHHHHhhCCCccCe--
Confidence            99999999999999999999999999999999999999999864               8999999999999999876  


Q ss_pred             ccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHH
Q 009612          406 ARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLAT  485 (531)
Q Consensus       406 ~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e  485 (531)
                      +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|||+||++.        ..++|||.|+|.|+|++||++|
T Consensus       284 ~R~~~~d~~l~-G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~r~C~G~~lA~~e  354 (394)
T 2wiy_A          284 LRFPTEDVEIG-GVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGPHSCAGQIISRAE  354 (394)
T ss_dssp             EEEESSCEEET-TEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGGGSCTTHHHHHHH
T ss_pred             eEEECCCEEEc-CeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC--------CCccCCCCCCCcCCcHHHHHHH
Confidence            89999999999 99999999999999999999999999999999999742        2589999999999999999999


Q ss_pred             HHHHHHHHHhhce-eeeCCCCCCCccccccccccccCceeEEE
Q 009612          486 VSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNPLRAVA  527 (531)
Q Consensus       486 ~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  527 (531)
                      ++++++.|+++|+ +++.++  ..+..  +...+..+.++|++
T Consensus       355 ~~~~l~~ll~~~~~~~l~~~--~~~~~--~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          355 ATTVFAVLAERYERIELAEE--PTVAH--NDFARRYRKLPIVL  393 (394)
T ss_dssp             HHHHHHHHHHHCSCEEESSC--CEECC--CSSBCCEEECEEEE
T ss_pred             HHHHHHHHHHhCCCceECCC--Ccccc--cccccCcceeeEEe
Confidence            9999999999998 998752  33322  33445557777765


No 71 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=2.6e-56  Score=439.78  Aligned_cols=382  Identities=15%  Similarity=0.176  Sum_probs=298.8

Q ss_pred             CcccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcchh-hh-------hh
Q 009612           75 VPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQS-AE-------CL  146 (531)
Q Consensus        75 ~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-~~-------~~  146 (531)
                      +|.+++..  . .+++..  ++.++|  ||++.+.+| +.. ++|++++.+++|+++..++....... ..       ..
T Consensus        24 lp~~~~~~--~-~~P~~~--~~lr~~--gpv~~~~~g-~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~   94 (416)
T 3p3o_A           24 LPFLDFTD--P-NFSWDS--PEVAEA--REKSWIART-PLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRD   94 (416)
T ss_dssp             CCBCCTTS--T-TCCTTS--HHHHHH--HHHCSEEEC-SSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHH
T ss_pred             CCCCCccc--c-cCCchH--HHHHHh--CCccccccC-CCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhh
Confidence            45444432  2 467776  445578  899999988 666 99999999999999765544321100 00       01


Q ss_pred             hcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHh
Q 009612          147 MFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVF  225 (531)
Q Consensus       147 ~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~f  225 (531)
                      ..+.++ +..+|+.|+++||.+ .+.|+++.++.+.+.++++++.+++.+ .    ++++|+...+ ..+++++++. +|
T Consensus        95 ~~~~~l-~~~dg~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~----~g~~d~~~~~~~~~~~~vi~~-l~  166 (416)
T 3p3o_A           95 FMVDFL-QSLDGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL-P----QGDFDFVQHFPHPLPALVMCQ-LL  166 (416)
T ss_dssp             HHHHSG-GGCCHHHHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC-C----SSSEEHHHHTTTHHHHHHHHH-HH
T ss_pred             hhcCcc-ccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh-c----cCCccHHHHHHHHHHHHHHHH-Hh
Confidence            123344 456999999999999 789999999999999999999999998 2    2358976555 5699999998 58


Q ss_pred             ccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCC
Q 009612          226 GVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLG  305 (531)
Q Consensus       226 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  305 (531)
                      |.+.+      ....+.+....+.......             .+....++..++.+.+.+++.+.|+++++.       
T Consensus       167 G~~~~------~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------  220 (416)
T 3p3o_A          167 GFPLE------DYDTVGRLSIETNLGLALS-------------NDQDILVKVEQGLGRMFDYLVAAIEKRKVE-------  220 (416)
T ss_dssp             TCCGG------GHHHHHHHHHTTCGGGTTC-------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------
T ss_pred             CCCHH------HHHHHHHHHHHHHhhcccc-------------cchhhHHHHHHHHHHHHHHHHHHHHHHHhC-------
Confidence            87643      2233333332222111000             012334567778888999999999988764       


Q ss_pred             CCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChh
Q 009612          306 DNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPY  385 (531)
Q Consensus       306 ~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~  385 (531)
                      ..+|+++.|++...+++++++|+.+++..+++||+|||+++++|++++|++||++|+++++|++               |
T Consensus       221 ~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------~  285 (416)
T 3p3o_A          221 PGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE---------------L  285 (416)
T ss_dssp             CCSSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------G
T ss_pred             CCccHHHHHHHhhccCCCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------H
Confidence            5679999999887666899999999999999999999999999999999999999999999975               8


Q ss_pred             HHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcc
Q 009612          386 LQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLR  465 (531)
Q Consensus       386 l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~  465 (531)
                      ++|||+|+||++|+++... +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|||+||.+         ..
T Consensus       286 l~a~i~E~lRl~p~~~~~~-~R~~~~d~~l~-G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------~~  354 (416)
T 3p3o_A          286 APQAVEEVLRWSPTLPVTA-TRVAAEDFEVN-GVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------AP  354 (416)
T ss_dssp             HHHHHHHHHHHSCSCSSCC-EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------SC
T ss_pred             HHHHHHHHHhhccccccCc-ceEeCCCeEEC-CEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------CC
Confidence            9999999999999994433 89999999998 9999999999999999999999999999999999742         24


Q ss_pred             cccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          466 LAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       466 ~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      ++|||.|+|.|+|++||++|++++++.|+++| ++++.++  ..+.+  +..++....++|++.|
T Consensus       355 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~--~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          355 SIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE--ITWRH--ELGVAGPDALPLRFGA  415 (416)
T ss_dssp             CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC--CEECC--CTTCCCEEECEEEESC
T ss_pred             eecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC--Cceec--CCCccCcceeeEEEec
Confidence            89999999999999999999999999999999 4888753  23332  3344455788888765


No 72 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=5.8e-56  Score=430.54  Aligned_cols=353  Identities=16%  Similarity=0.161  Sum_probs=280.0

Q ss_pred             hHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCc-----chhhh-hh--h---cccceecCCC
Q 009612           90 HRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPI-----KQSAE-CL--M---FSRAIGFAPN  157 (531)
Q Consensus        90 ~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~-----~~~~~-~~--~---~g~~~~~~~~  157 (531)
                      +..+.++ ++|  |||+++  | +  .++++|++.+++|+.+ ..|++++.     ..... ..  .   .|.++++ .+
T Consensus         2 ~~~~~~l-r~~--Gpv~~~--g-~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~   72 (368)
T 1io7_A            2 YDWFSEM-RKK--DPVYYD--G-N--IWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLT-SD   72 (368)
T ss_dssp             HHHHHHH-HHH--CSEEEC--S-S--CEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGG-CC
T ss_pred             CHHHHHH-Hhc--CCeEeE--C-C--EEEEecHHHHHHHHcCccccccccccccccccccccccccccccccccccc-CC
Confidence            5667777 588  899765  5 4  6899999999999986 45777764     11010 01  1   2255544 58


Q ss_pred             ChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCch
Q 009612          158 GTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSK  236 (531)
Q Consensus       158 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~  236 (531)
                      |+.|+++||.+ .+.|++++++.+.+.+.++++++++.+ .   . +++|+...+ ..+++++++.+ ||.+++.     
T Consensus        73 g~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~---~-g~~d~~~~~~~~~~~~vi~~~-~G~~~~~-----  140 (368)
T 1io7_A           73 PPLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-D---P-REDDIVKKLAVPLPIIVISKI-LGLPIED-----  140 (368)
T ss_dssp             TTHHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-C---T-TSEEHHHHTTTHHHHHHHHHH-HTCCGGG-----
T ss_pred             ChHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-h---c-CCccHHHHHHHHHHHHHHHHH-hCCCHHH-----
Confidence            99999999999 789999999999999999999999998 3   2 369999877 78999999998 9987642     


Q ss_pred             hHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHh
Q 009612          237 SLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLS  316 (531)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~  316 (531)
                       ...+.+.....+.   ..  .  .|.        . .++..++.+.+.+++.+.+         .   ...|+++.+++
T Consensus       141 -~~~~~~~~~~~~~---~~--~--~p~--------~-~~~~~~~~~~~~~~~~~~i---------~---~~~d~l~~ll~  191 (368)
T 1io7_A          141 -KEKFKEWSDLVAF---RL--G--KPG--------E-IFELGKKYLELIGYVKDHL---------N---SGTEVVSRVVN  191 (368)
T ss_dssp             -HHHHHHHGGGCTT---SC--C--CTT--------C-HHHHHHHHHHHHHHHHHHT---------T---SSCHHHHHHHT
T ss_pred             -HHHHHHHHHHHHh---cc--C--ChH--------H-HHHHHHHHHHHHHHHHHHh---------C---CCCCHHHHHHh
Confidence             2222222111110   00  0  121        1 1344455666677766666         1   35689999997


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhC
Q 009612          317 LEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRV  396 (531)
Q Consensus       317 ~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl  396 (531)
                      .    +++++++.+++..+++||+|||+++++|++++|++|| +|+++++| +               |++|||+|+||+
T Consensus       192 ~----~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~---------------~l~a~i~E~lRl  250 (368)
T 1io7_A          192 S----NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N---------------LYLKAIEEALRY  250 (368)
T ss_dssp             S----SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T---------------CHHHHHHHHHHH
T ss_pred             c----cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c---------------hHHHHHHHHHHh
Confidence            5    5899999999999999999999999999999999999 99999999 3               899999999999


Q ss_pred             CCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCC
Q 009612          397 HPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVC  476 (531)
Q Consensus       397 ~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C  476 (531)
                      +|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+|||+-          ..++|||.|+|.|
T Consensus       251 ~p~~~~~--~R~~~~d~~l~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~~~FG~G~r~C  317 (368)
T 1io7_A          251 SPPVMRT--VRKTKERVKLG-DQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNP----------NPHLSFGSGIHLC  317 (368)
T ss_dssp             SCSBCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCS----------CCCCTTCCGGGSC
T ss_pred             CcccccC--ceeeCCCeeEC-CEEECCCCEEEecHhhhCCChhhCCCcceeCCCCCC----------CCCcCCCCCccCC
Confidence            9999965  89999999999 999999999999999999999999999999999931          2489999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhce-eeeCCCCCCCccccccccccccCceeEEEeeCC
Q 009612          477 PGKNLGLATVSLWVAQLVKVYI-WVPDVASPADLSEVLKLSCEMKNPLRAVAVDRN  531 (531)
Q Consensus       477 ~G~~~a~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  531 (531)
                      +|++||++|++++++.|+++|+ +++++   ..+.  .+...+....++|++++|+
T Consensus       318 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~---~~~~--~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          318 LGAPLARLEARIAIEEFSKRFRHIEILD---TEKV--PNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCSEEEEEE---EEEC--CCSSBCCEEEEEEEEEC--
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCEecC---ceec--cCCcccCCceeEEEeccCC
Confidence            9999999999999999999996 99874   2222  2345566789999999985


No 73 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=6.5e-56  Score=429.44  Aligned_cols=351  Identities=15%  Similarity=0.169  Sum_probs=281.6

Q ss_pred             hHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCC-CCCCCCc-ch-hhh----h-hhcc----cceecCCC
Q 009612           90 HRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSP-HFADRPI-KQ-SAE----C-LMFS----RAIGFAPN  157 (531)
Q Consensus        90 ~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~-~~~~~~~-~~-~~~----~-~~~g----~~~~~~~~  157 (531)
                      +..+.++ ++|  |||+++. |    .++++||+.+++|+.+. .|++++. .. ...    . ...|    .++++. +
T Consensus         2 ~~~~~~l-r~~--gpv~~~~-g----~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-d   72 (367)
T 3b4x_A            2 YDWFKQM-RKE--SPVYYDG-K----VWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-D   72 (367)
T ss_dssp             HHHHHHH-HHH--CSEEECS-S----SEEECSHHHHHHHHHCTTTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-C
T ss_pred             CHHHHHH-HHc--CCceeeC-C----EEEEecHHHHHHHHcCchhhccCcccccccccccccccchhhcccccccccC-C
Confidence            4567777 478  8997765 3    69999999999999864 6776643 21 110    1 2333    566554 8


Q ss_pred             ChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCch
Q 009612          158 GTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSK  236 (531)
Q Consensus       158 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~  236 (531)
                      |+.|+++||.+ .+.|+++.++.  +.++++++++++.+.     + ++|+...+ ..+++++++. +||.+ +  +   
T Consensus        73 g~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~--~---  136 (367)
T 3b4x_A           73 PPLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-P--D---  136 (367)
T ss_dssp             TTHHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-C--C---
T ss_pred             chhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-C--c---
Confidence            99999999999 78899999987  999999999998875     2 49999765 7999999999 79987 3  2   


Q ss_pred             hHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHh
Q 009612          237 SLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLS  316 (531)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~  316 (531)
                       ...+......++..+.      ..|..  .       +.. ++.+.+.+++.+.++++++.       ...|+++.+++
T Consensus       137 -~~~~~~~~~~~~~~~~------~~p~~--~-------~~~-~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~  192 (367)
T 3b4x_A          137 -VKKVKDWSDLVALRLG------RADEI--F-------SIG-RKYLELISFSKKELDSRKGK-------EIVDLTGKIAN  192 (367)
T ss_dssp             -HHHHHHHHHHHHTTTT------STTGG--G-------CCC-HHHHHHHHHHHHHHHHHTTT-------CCSSHHHHHHT
T ss_pred             -HHHHHHHHHHHHhccC------CChhh--H-------HHH-HHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHh
Confidence             2334444443333211      02211  0       112 45667888888888877642       45799999997


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhC
Q 009612          317 LEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRV  396 (531)
Q Consensus       317 ~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl  396 (531)
                      .    +++++|+.+++..+++||+|||+++++|++++|++ |++|+++++|++                 +|||+|+||+
T Consensus       193 ~----~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~-----------------~a~i~E~lRl  250 (367)
T 3b4x_A          193 S----NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA-----------------LKAVEEALRF  250 (367)
T ss_dssp             S----SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-----------------HHHHHHHHHH
T ss_pred             c----cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-----------------hHHHHHHHHh
Confidence            6    58999999999999999999999999999999999 999999999963                 8999999999


Q ss_pred             CCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCC
Q 009612          397 HPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVC  476 (531)
Q Consensus       397 ~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C  476 (531)
                      +|+++..  +|.+++|++++ ||.||||+.|+++.+++||||++|+||++|+||||.          ..++|||.|+|.|
T Consensus       251 ~p~~~~~--~R~~~~d~~l~-g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C  317 (367)
T 3b4x_A          251 SPPVMRT--IRVTKEKVKIR-DQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------NPHLSFGSGIHLC  317 (367)
T ss_dssp             SCSBCCE--EEEESSCEEET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTSC
T ss_pred             cCcccCe--eEEeCCCeEEC-CEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------CCCcCCCCCCccC
Confidence            9999965  89999999999 999999999999999999999999999999999984          2589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          477 PGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       477 ~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                      +|++||++|++++++.|+++| ++++.++   .+..  +...+....++|++.+
T Consensus       318 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~--~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          318 LGAPLARLEARIALEEFAKKFRVKEIVKK---EKID--NEVLNGYRKLVVRVER  366 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHEEEEEEEEE---EECC--CSSBCSEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCceeCCc---cccc--cccccCcceEEEEecC
Confidence            999999999999999999999 7998763   3322  4455566888998864


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.9e-55  Score=422.65  Aligned_cols=320  Identities=16%  Similarity=0.148  Sum_probs=257.1

Q ss_pred             HhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhhhhhcccceecCCCChhHHHHHHHHhhccCChh
Q 009612           98 WSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPR  176 (531)
Q Consensus        98 ~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~  176 (531)
                      ++|  |||+++  |    +++|+||+.+++|+.+ ..|++++.......  .+.++++ .+|+.|+++||.+ .+.|++.
T Consensus         2 r~~--gpv~~~--g----~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~--~~~~l~~-~~g~~~~~~R~~~-~~~fs~~   69 (343)
T 2rfb_A            2 RLN--DPVHYD--G----AWHVYKYSDVKHVLMNDKIFSSNPGNRYSNA--GGISFIT-MDNPEHKEFRDIS-APYFLPS   69 (343)
T ss_dssp             -CC--CCEEET--T----EEEECSHHHHHHHHHCTTTEESSCSSCCC-----CCGGGG-CCHHHHHHHHHHH-HHHHSHH
T ss_pred             CCc--CCeeee--C----eEEEcCHHHHHHHHhChhhcccCCcCCCCCc--ccccccc-CCchHHHHHHHHh-hhhcCHH
Confidence            467  899764  3    7999999999999986 34777652111111  3566654 4899999999999 7889999


Q ss_pred             hhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-HHHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhccc
Q 009612          177 RILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-QLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAF  255 (531)
Q Consensus       177 ~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (531)
                      +++.+.+.+.++++++++.+.       ++|+...+ ..+++++++.+ ||.+.+.      ...+.+....++...   
T Consensus        70 ~l~~~~~~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~~~---  132 (343)
T 2rfb_A           70 KINDYKDFIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSD------MPLFKLWSDYIIGNK---  132 (343)
T ss_dssp             HHGGGHHHHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHHTSC---
T ss_pred             HHHHHHHHHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHH------HHHHHHHHHHHhhcc---
Confidence            999999999999999998874       68998865 89999999998 9987642      233444443333211   


Q ss_pred             ccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcC-CCCCHHHHHHHHHH
Q 009612          256 NWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGE-EKLSDDDMIAVLWE  334 (531)
Q Consensus       256 ~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~~l~~~ei~~~~~~  334 (531)
                           .|.+.       ..++. +..+.+.+++.+.+              ..| ++.+++...+ ..++++++.+++..
T Consensus       133 -----~p~~~-------~~~~~-~~~~~~~~~~~~~i--------------~~d-l~~ll~~~~~~~~l~~~ei~~~~~~  184 (343)
T 2rfb_A          133 -----RDENF-------NYVNN-RMVSRLLEIFKSDS--------------HGI-INVLAGSSLKNRKLTMDEKIKYIML  184 (343)
T ss_dssp             -----CSSHH-------HHHHH-HHHHHHHHHHHSCC--------------SSH-HHHHHTCBCSSSBCCHHHHHHHHHH
T ss_pred             -----Ccchh-------hHHHH-HHHHHHHHHHHHHH--------------hcc-HHHHHhhhcCCCCCCHHHHHHHHHH
Confidence                 12211       11223 44444555444433              346 8888876543 35999999999999


Q ss_pred             HHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCC-CCCccccccccce
Q 009612          335 MIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPG-PLLSWARLSTSDV  413 (531)
Q Consensus       335 ~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~-~~~~~~R~~~~d~  413 (531)
                      +++||+|||+++++|++++|++||++|+++++|+                  +|||+|+||++|++ +..  +|.+++|+
T Consensus       185 ~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~a~i~E~lRl~p~~~~~~--~R~~~~d~  244 (343)
T 2rfb_A          185 LIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR------------------SGFVEETLRYYSPIQFLP--HRFAAEDS  244 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH------------------HHHHHHHHHHSCSBCCBC--CCEESSCE
T ss_pred             HHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc------------------HHHHHHHHhhCccccccc--ceEECCCe
Confidence            9999999999999999999999999999999985                  79999999999999 865  89999999


Q ss_pred             eecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHH
Q 009612          414 QLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQL  493 (531)
Q Consensus       414 ~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~l  493 (531)
                      +++ ||.||||+.|+++.+++||||++|+||++|+||||           ..++|||.|+|.|+|++||++|++++++.|
T Consensus       245 ~~~-g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~l  312 (343)
T 2rfb_A          245 YIN-NKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLEASIALNDI  312 (343)
T ss_dssp             EET-TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHH
T ss_pred             EEC-CEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------CCCccCCCCCccCCChHHHHHHHHHHHHHH
Confidence            999 99999999999999999999999999999999994           148999999999999999999999999999


Q ss_pred             Hhhce-eeeCCCCC
Q 009612          494 VKVYI-WVPDVASP  506 (531)
Q Consensus       494 l~~f~-~~~~~~~~  506 (531)
                      +++|+ ++++++.+
T Consensus       313 l~~f~~~~~~~~~~  326 (343)
T 2rfb_A          313 LNHFKRIKIDYKKS  326 (343)
T ss_dssp             HHHCSCCCBCTTTC
T ss_pred             HHhCCCceeCCCcc
Confidence            99996 99987433


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=6.6e-54  Score=421.50  Aligned_cols=385  Identities=15%  Similarity=0.170  Sum_probs=282.2

Q ss_pred             CCCCcccccc---cccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcch--hhh-
Q 009612           72 PKGVPLFGSL---FTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQ--SAE-  144 (531)
Q Consensus        72 P~~~p~iG~~---~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~--~~~-  144 (531)
                      +.++|.+|.-   ..+. .+++..+.++++ +  |||+  +++ +..+++|++++.+++|+++ ..|+......  ... 
T Consensus        17 ~~~~P~~~~dp~~~~~~-~dP~~~~~~lR~-~--gPV~--~~~-~~~~~~vt~~~~v~~vl~d~~~fs~~~~~~~~~~~~   89 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYF-ADPYPEQETLRE-A--GPVV--YLD-KWNVYGVARYAEVYAVLNDPLTFCSSRGVGLSDFKK   89 (412)
T ss_dssp             STTSCEECCCTTSHHHH-HSCHHHHHHHHH-H--CSSE--EET-TTTEEEECSHHHHHHHHTCTTTEESTTCSSSSCTTT
T ss_pred             CCCCCccCCCCCCHHHH-hCcHHHHHHHHh-c--CCEE--EEC-CCCEEEECCHHHHHHHHcCCccccCCCccccccccc
Confidence            4457877631   1233 478888888865 5  8994  666 6678999999999999986 3443322111  010 


Q ss_pred             -hhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccch-HHHHHHHHHHHHHH
Q 009612          145 -CLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSL-RKHLQLAALNNIMG  222 (531)
Q Consensus       145 -~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl-~~~~~~~~~~vi~~  222 (531)
                       ....+.+.++..||+.|+++||.+ ++.|++++++.+++.+.+.++++++++...   ++.+|+ .++...+..++++.
T Consensus        90 ~~~~~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~---~~~~D~v~~~~~~~~~~~i~~  165 (412)
T 4dnj_A           90 EKPWRPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLAR---GGNIDAIADLAEAYPLSVFPD  165 (412)
T ss_dssp             SCCSSCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHHT---TSEEETCCCCCCHHHHHHHHH
T ss_pred             cccccCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhcc---CCCceeHHHHHhhhhHhHHHH
Confidence             111123344566999999999999 789999999999999999999999998653   456665 45556677788876


Q ss_pred             HHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccC
Q 009612          223 SVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNST  302 (531)
Q Consensus       223 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (531)
                      +. |.+....   +....+...+   ......               .....+........+..+..    ++.+...  
T Consensus       166 l~-g~~~~~~---~~~~~~~~~~---~~~~~~---------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~--  217 (412)
T 4dnj_A          166 AM-GLKQEGR---ENLLPYAGLV---FNAFGP---------------PNELRQSAIERSAPHQAYVA----EQCQRPN--  217 (412)
T ss_dssp             HH-TCCSTTG---GGHHHHHHHH---HHHTSC---------------SSHHHHHHHHTCHHHHHHHH----HHTSGGG--
T ss_pred             Hc-CCchhhh---hhhhhhhhcc---cccccc---------------cHHHHHHHHHHHHHHHHHHH----HHHHhhc--
Confidence            54 5443222   1233333222   221111               01111222222222333322    2222212  


Q ss_pred             CCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCC
Q 009612          303 KLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVAR  382 (531)
Q Consensus       303 ~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  382 (531)
                        ....++...+....++.+++++|+.+++..+++||+|||+++++|++++|++||++|+||++|..             
T Consensus       218 --~~~~~~~~l~~~~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~~-------------  282 (412)
T 4dnj_A          218 --LAPGGFGACIHAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPS-------------  282 (412)
T ss_dssp             --SCTTSHHHHHHHTTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------
T ss_pred             --cccccchhhhHhhhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCcc-------------
Confidence              12344444444444555799999999999999999999999999999999999999999998753             


Q ss_pred             ChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCC
Q 009612          383 LPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGG  462 (531)
Q Consensus       383 lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~  462 (531)
                        |+.++++|++|++|+++..  .|.+++|++|+ |+.||||+.|+++.+++||||++|+||++||||||..        
T Consensus       283 --~~~~~~eE~lR~~pp~~~~--~R~a~~d~~l~-G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~~--------  349 (412)
T 4dnj_A          283 --LARNAFEEAVRFESPVQTF--FRTTTRDVELA-GATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTS--------  349 (412)
T ss_dssp             --GHHHHHHHHHHHHCSBCEE--EEEESSCEEET-TEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCT--------
T ss_pred             --ccccccceeeeecCCcccc--cccCCCCeEEC-CccCCCCCeEEeehhhccCChhhCCCccccCCCCCCC--------
Confidence              7899999999999999987  89999999999 9999999999999999999999999999999999742        


Q ss_pred             CcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEee
Q 009612          463 DLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAVD  529 (531)
Q Consensus       463 ~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  529 (531)
                        .++|||.|+|.|+|++||++|++++++.|+++| +++++++  .++  ..+.+++..+.++|+++|
T Consensus       350 --~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~--~~~--~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          350 --GHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP--LKR--RFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             --TCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC--CEE--EECSSBEEEEECEEEEEE
T ss_pred             --CCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC--Cee--ecCCCccCCcceeEEEEe
Confidence              489999999999999999999999999999999 8998752  333  335566777899999987


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=3.5e-49  Score=386.88  Aligned_cols=374  Identities=14%  Similarity=0.133  Sum_probs=276.8

Q ss_pred             CchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcC-CCCCCCCcchhhhhhhcccceecCCCChhHHHHH
Q 009612           87 GLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTS-PHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLR  165 (531)
Q Consensus        87 ~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R  165 (531)
                      .+++..+.+++++.+ .++  +|...+...++|+.++.|++|+++ ..|+.+...........+..++...|+++|+++|
T Consensus        37 ~~~~~~~~~lr~~~~-~~~--~~~~~~gg~W~vtr~~dv~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~R  113 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGI-PDL--IWTPFTGGHWIATNGDTVKEVYSDPTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYR  113 (417)
T ss_dssp             GCHHHHHHHHSCTTC-CSE--EEESSTTSEEEECSHHHHHHHHTCTTTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHH
T ss_pred             cChHHHHHHHHhhCC-CCE--EecCCCCCEEEECCHHHHHHHHcCchhccCCCcccccccccccccCcccCCcHHHHHHH
Confidence            467777877765541 245  343212346899999999999996 5666543322111111123344556999999999


Q ss_pred             HHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHHHH-HHHHHHHHHHhccccccCCCchhHHHHHHH
Q 009612          166 RIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHLQL-AALNNIMGSVFGVRYDIDRDSKSLQELTEM  244 (531)
Q Consensus       166 r~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~  244 (531)
                      |.+ ++.|++++++.+++.+++.++++++++..    ++++|+...+.. +...+++ .++|.+..      ....+.+.
T Consensus       114 rll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~-~llg~~~~------d~~~~~~~  181 (417)
T 4dxy_A          114 KAL-DKGLNLAKIRKVEDKVREVASSLIDSFAA----RGECDFAAEYAELFPVHVFM-ALADLPLE------DIPVLSEY  181 (417)
T ss_dssp             HHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHT----TSEEEHHHHTTTTHHHHHHH-HHTTCCGG------GHHHHHHH
T ss_pred             HHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhh----cCCeeeHHHHHhhhHHHHHH-HHcCCCHH------HHHHHHhh
Confidence            999 78999999999999999999999999864    356887666544 5555555 46776543      23344443


Q ss_pred             HHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHHHHHhhhccCCCCCCccHHHHHHhhhcCC-CC
Q 009612          245 VREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIEEHRRLKNSTKLGDNADFVDVLLSLEGEE-KL  323 (531)
Q Consensus       245 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~l  323 (531)
                      ...+.....      ..        +.........+...+.+++.++++++++.       ..+|+++.|+.+..++ .+
T Consensus       182 ~~~~~~~~~------~~--------~~~~~~~~~~~~~~~~~~~~~li~~rr~~-------~~ddl~s~L~~~~~~~~~~  240 (417)
T 4dxy_A          182 ARQMTRPEG------NT--------PEEMATDLEAGNNGFYAYVDPIIRARVGG-------DGDDLITLMVNSEINGERI  240 (417)
T ss_dssp             HHHHHSCCC------SS--------HHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTCEETTEEC
T ss_pred             hhhhccccc------cC--------hHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CccchhhhhccccccCCcc
Confidence            333322110      01        22233455667778888888888877543       5779999999876554 69


Q ss_pred             CHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcCCCChhccCCChhHHHHHHHHhhCCCCCCCC
Q 009612          324 SDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNSKITDADVARLPYLQAVVKEALRVHPPGPLL  403 (531)
Q Consensus       324 ~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~  403 (531)
                      +++++.+++..+++||+|||+++++|++++|++||++++++++|.+.+               ..++ |.+|++++++..
T Consensus       241 ~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~---------------~~av-ee~~~~~~~~~~  304 (417)
T 4dxy_A          241 AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL---------------MRGA-EEMFRRFPVVSE  304 (417)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH---------------HHTH-HHHHHHSCCBEE
T ss_pred             chhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc---------------ccce-eeeecccccccc
Confidence            999999999999999999999999999999999999999999986632               2233 444444555555


Q ss_pred             ccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccccCCcCCCCCCcccccCCCCCCCCcchHHHH
Q 009612          404 SWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFLEADVDVRGGDLRLAPFGAGRRVCPGKNLGL  483 (531)
Q Consensus       404 ~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  483 (531)
                        .|.+++|++++ |+.||||+.|+++.+++||||++|+||++|||+|+          ...++|||.|+|.|+|++||+
T Consensus       305 --~R~a~~d~~l~-G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~----------~~~~l~FG~G~r~ClG~~LA~  371 (417)
T 4dxy_A          305 --ARMVAKDQEYK-GVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR----------SISHSTFGGGPHRCAGMHLAR  371 (417)
T ss_dssp             --EEEECSCEEET-TEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHH
T ss_pred             --ccccccceEec-CccccCCCEEEEeehhhcCChhhCCCccccCCCCC----------CCCCCCcCCCcccCccHHHHH
Confidence              89999999999 99999999999999999999999999999999993          235899999999999999999


Q ss_pred             HHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEEEe
Q 009612          484 ATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAVAV  528 (531)
Q Consensus       484 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  528 (531)
                      +|++++++.|+++| +++++++.. .+..  +..++....++|++-
T Consensus       372 ~E~~i~l~~Ll~rfp~~~l~~~~~-~~~~--~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          372 MEVIVTLEEWLKRIPEFSFKEGET-PIYH--SGIVAAVENVPLVWP  414 (417)
T ss_dssp             HHHHHHHHHHHHHCSSCEECTTCC-CEEE--CSSBCEEECCEEECC
T ss_pred             HHHHHHHHHHHHhCCCceeCCCCC-eeec--CCcccCceeeeEEee
Confidence            99999999999999 999986533 3322  223334467777763


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=2e-47  Score=365.75  Aligned_cols=331  Identities=17%  Similarity=0.140  Sum_probs=226.8

Q ss_pred             CCCC-CCCCccccccccc----CCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhcCCCCCCCCcch-
Q 009612           68 AIPG-PKGVPLFGSLFTL----SRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILTSPHFADRPIKQ-  141 (531)
Q Consensus        68 ~~Pg-P~~~p~iG~~~~~----~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~-  141 (531)
                      .||| |+++|++|+...+    ...+++..+.+++++    ||++.  .  ...+++++++.+++|+++..|++++... 
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~----pV~~~--~--~~~~vv~~~~~v~~vl~d~~f~~~~~~~~  106 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES----GVRRS--R--TETWVVADHATARQVLDDPAFTRATGRTP  106 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH----CEEEC--S--SSCEEECSHHHHHHHHHCSSEESSCCCCC
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC----CceeC--C--CCEEEEcCHHHHHHHHcCCCcCCCccccc
Confidence            5677 5578999987542    225788999998865    68653  3  2479999999999999876676654211 


Q ss_pred             hh-------hhhhcccceecCCCChhHHHHHHHHhhccCChhhhcccccchHHHHHHHHHHHHHhhcCCCccchHHHH-H
Q 009612          142 SA-------ECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILSHEPGRQLDCAVMLQNIANEQKHNGFVSLRKHL-Q  213 (531)
Q Consensus       142 ~~-------~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~  213 (531)
                      ..       ... .+.++++ .+|+.|        .+.|+     . ++.+++.++++++.+.      +++|+...+ .
T Consensus       107 ~~~~~~~~~~~~-~~~~l~~-~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~------g~~Dl~~~~a~  164 (381)
T 2yjn_B          107 EWMRAAGAPPAE-WAQPFRD-VHAASW--------EGEVP-----D-VGELAESFAGLLPGAG------ARLDLVGDFAW  164 (381)
T ss_dssp             HHHHHHTCCHHH-HTHHHHH-HHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC------------CCCCCCT
T ss_pred             ccccccccccch-hhhhhhh-CCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc------CcchHHHHHHH
Confidence            01       111 2344444 478888        46677     4 8999999999999885      368888665 6


Q ss_pred             HHHHHHHHHHHhccccccCCCchhHHHHHHHHHHHHHhhcccccccchhhhhhhcChhhHHHHHHhHhHHHHHHHHHHHH
Q 009612          214 LAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNWSDYLPWMSLFYDPFRIHERCLKLVPRVKNFVRGIIE  293 (531)
Q Consensus       214 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (531)
                      .+++++|+.+ ||.+.+.     .  ++.+.+.....   .       +    + .+... ++.       .+.      
T Consensus       165 ~l~~~vi~~l-~G~~~~~-----~--~~~~~~~~~~~---~-------~----~-~~~~~-~~~-------~~~------  207 (381)
T 2yjn_B          165 QVPVQGMTAV-LGAAGVL-----R--GAAWDARVSLD---A-------Q----L-SPQQL-AVT-------EAA------  207 (381)
T ss_dssp             HHHHHHHHTC------CC-----H--HHHHHHTTHHH---H-------T----T-SCCCH-HHH-------HHH------
T ss_pred             HHHHHHHHHH-cCCCHHH-----H--HHHHHHHHhcc---C-------C----C-CHHHH-HHH-------HHH------
Confidence            9999999984 9987641     1  22222111000   0       0    0 00000 000       000      


Q ss_pred             HHHhhhccCCCCCCccHHHHHHhhhcCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhhCHHHHHHHHHHHHhhcC
Q 009612          294 EHRRLKNSTKLGDNADFVDVLLSLEGEEKLSDDDMIAVLWEMIFRGTDTTALLTEWIMAELVLNQKVQAKLHAELQAVNS  373 (531)
Q Consensus       294 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~ei~~~~~~~~~AG~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  373 (531)
                                       ++.++         +    +++..+++||+|||+++++|++++|++||++|+++++|++    
T Consensus       208 -----------------~~~l~---------~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~----  253 (381)
T 2yjn_B          208 -----------------VAALP---------A----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA----  253 (381)
T ss_dssp             -----------------HHHCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC----
T ss_pred             -----------------HHHHH---------H----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH----
Confidence                             00000         0    6788999999999999999999999999999999999864    


Q ss_pred             CCChhccCCChhHHHHHHHHhhCCCCCCCCccccccccceeecCCeeeCCCCEEEechhhhhcCCCCCCCCCCCCCCccc
Q 009612          374 KITDADVARLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLIPANTTAMVNMWAITHDSQVWEDPHVFKPERFL  453 (531)
Q Consensus       374 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~~R~~~~d~~i~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  453 (531)
                                 |+++||+|+||++|+++..  +|.+++|++++ |+.||||+.|+++.+++|+||++|+||++|||+||+
T Consensus       254 -----------~l~~~i~E~LR~~pp~~~~--~R~a~~d~~l~-G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~  319 (381)
T 2yjn_B          254 -----------AAQRTVAEVLRLHPALHLE--RRTATAEVRLG-EHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPD  319 (381)
T ss_dssp             -------------HHHHHHHHHHSCSCSEE--EEEESSCEESS-SCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSC
T ss_pred             -----------HHHHHhCeeeeecCCCcce--eEEECCCeEEC-CEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCC
Confidence                       9999999999999999976  89999999999 999999999999999999999999999999999997


Q ss_pred             cCCcCCCCCCcccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-eeeeCCCCCCCccccccccccccCceeEE
Q 009612          454 EADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVSLWVAQLVKVY-IWVPDVASPADLSEVLKLSCEMKNPLRAV  526 (531)
Q Consensus       454 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  526 (531)
                      +         ..++|||.| |.|+|++||++|++++++.|+++| ++++.++. ..+  ..+..++..+.++|+
T Consensus       320 ~---------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~-~~~--~~~~~~r~~~~LpV~  380 (381)
T 2yjn_B          320 A---------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV-VRR--RRSPVLRGTNRCPVE  380 (381)
T ss_dssp             C---------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC-EEC--TTCSSSCCEEECCCC
T ss_pred             C---------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC-ccc--ccCcccCCCccceee
Confidence            4         258999999 999999999999999999999999 99987643 222  234455555666654


No 78 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.63  E-value=80  Score=22.62  Aligned_cols=61  Identities=11%  Similarity=0.135  Sum_probs=41.8

Q ss_pred             cccccccccCCC-chhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhc---CCCCCCCCc
Q 009612           76 PLFGSLFTLSRG-LAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILT---SPHFADRPI  139 (531)
Q Consensus        76 p~iG~~~~~~~~-~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~---~~~~~~~~~  139 (531)
                      -+++|+..=... .....+.++..+|| |.|..+ .+ ++-+|...|.+.++..+.   +..+..|+.
T Consensus        12 lYV~NL~~~~~~~~lk~~L~~lF~~yG-G~Vl~V-tg-G~AfV~F~~~esA~~A~~~l~G~~l~gr~i   76 (96)
T 2diu_A           12 LYVYNLPANKDGKSVSNRLRRLSDNCG-GKVLSI-TG-CSAILRFINQDSAERAQKRMENEDVFGNRI   76 (96)
T ss_dssp             EEEESCCTTSCHHHHHHHHHHHHHTTT-CCEEEC-CT-TCEEEEESSHHHHHHHHHHHTTCCSSSSCC
T ss_pred             EEEeCCCCcCCHHHHHHHHHHHHHHcC-CeeEEE-ec-CEEEEEECCHHHHHHHHHHhcCCccCCceE
Confidence            348887654321 33456788889995 488666 55 889999999999988876   344444443


No 79 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=27.87  E-value=48  Score=16.18  Aligned_cols=12  Identities=33%  Similarity=0.556  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHh
Q 009612          359 KVQAKLHAELQA  370 (531)
Q Consensus       359 ~~~~~l~~Ei~~  370 (531)
                      ..|+++|.|+++
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            578999999875


No 80 
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=21.81  E-value=2.1e+02  Score=20.56  Aligned_cols=58  Identities=16%  Similarity=0.127  Sum_probs=39.0

Q ss_pred             CCCCCCCCcccccccccCCCchhHHHHHHHHhcCCCceEEEEcC-----CCccEEEecCHHHHHHhhc
Q 009612           68 AIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLG-----GSTPVVVASDPHTAKEILT  130 (531)
Q Consensus        68 ~~PgP~~~p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg-----~~~~~vvv~dp~~i~~vl~  130 (531)
                      .+|.|...-++||+..   .-....+.++..+|  |+|..+.+.     .+.-+|-..+++.+...+.
T Consensus         3 ~~~~~~~~l~V~nlp~---~~t~~~l~~~F~~~--G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~   65 (115)
T 3lqv_A            3 LPPEVNRILYIRNLPY---KITAEEMYDIFGKY--GPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD   65 (115)
T ss_dssp             CCTTCCSEEEEESCCT---TCCHHHHHHHHHTT--SCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC---CCCHHHHHHHHHhc--CCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence            3444544557888653   33456678888899  899888772     0244777888888887765


No 81 
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=21.55  E-value=2e+02  Score=20.27  Aligned_cols=50  Identities=8%  Similarity=-0.029  Sum_probs=37.1

Q ss_pred             cccccccccCCCchhHHHHHHHHhcCCCceEEEEcCCCccEEEecCHHHHHHhhc
Q 009612           76 PLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPVVVASDPHTAKEILT  130 (531)
Q Consensus        76 p~iG~~~~~~~~~~~~~~~~~~~ky~~g~i~~~~lg~~~~~vvv~dp~~i~~vl~  130 (531)
                      -++||+..   .-..+.+.++..+|  |+|..+.+..+.-+|-..+++.++..+.
T Consensus        14 l~V~nl~~---~~t~~~l~~~F~~~--G~i~~v~~~~~~afV~f~~~~~a~~A~~   63 (103)
T 2dgu_A           14 LFVRNLAN---TVTEEILEKAFSQF--GKLERVKKLKDYAFIHFDERDGAVKAME   63 (103)
T ss_dssp             EEEECCCT---TCCHHHHHHHHHHH--SCEEEEEECSSCEEEEESSHHHHHHHHH
T ss_pred             EEEeCCCC---CCCHHHHHHHHHhc--CCEEEEEEECCEEEEEeCCHHHHHHHHH
Confidence            46777654   23456678888899  8998888764566778889999888875


Done!