Query 009614
Match_columns 531
No_of_seqs 700 out of 3328
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 09:08:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009614.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009614hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 6E-35 2E-39 289.5 34.2 268 229-530 7-280 (304)
2 1vyh_C Platelet-activating fac 100.0 4E-35 1.4E-39 303.4 34.1 266 230-530 103-390 (410)
3 3ow8_A WD repeat-containing pr 100.0 1E-34 3.4E-39 290.4 33.5 268 229-530 26-300 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 2.6E-34 8.7E-39 289.6 36.1 266 228-530 48-322 (340)
5 3frx_A Guanine nucleotide-bind 100.0 5.8E-34 2E-38 284.4 32.3 280 226-530 8-296 (319)
6 4gqb_B Methylosome protein 50; 100.0 6.1E-34 2.1E-38 287.5 31.6 247 234-504 81-334 (344)
7 4gqb_B Methylosome protein 50; 100.0 5.9E-34 2E-38 287.6 29.0 277 223-530 18-309 (344)
8 2pbi_B Guanine nucleotide-bind 100.0 9.9E-33 3.4E-37 279.7 35.2 269 226-530 55-336 (354)
9 4g56_B MGC81050 protein; prote 100.0 3.6E-33 1.2E-37 283.3 30.3 265 222-503 29-345 (357)
10 3iz6_a 40S ribosomal protein R 100.0 2.7E-33 9.4E-38 286.5 28.7 271 229-530 60-354 (380)
11 1vyh_C Platelet-activating fac 100.0 3.8E-33 1.3E-37 288.5 27.9 243 230-500 145-410 (410)
12 3ow8_A WD repeat-containing pr 100.0 1.2E-32 4E-37 275.4 30.1 242 231-500 76-320 (321)
13 4ery_A WD repeat-containing pr 100.0 1.4E-31 4.8E-36 265.5 34.6 266 229-530 17-289 (312)
14 4aow_A Guanine nucleotide-bind 100.0 1.5E-31 5.2E-36 267.2 34.8 278 230-530 33-316 (340)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-32 7.5E-37 276.1 27.7 280 229-530 9-313 (345)
16 1nr0_A Actin interacting prote 100.0 6.2E-32 2.1E-36 293.9 33.1 267 230-530 54-377 (611)
17 2pm7_B Protein transport prote 100.0 4.6E-32 1.6E-36 267.7 29.1 249 231-501 5-285 (297)
18 1got_B GT-beta; complex (GTP-b 100.0 7.2E-32 2.5E-36 271.6 31.1 242 232-498 94-340 (340)
19 1nr0_A Actin interacting prote 100.0 2.1E-31 7.1E-36 289.8 36.6 248 235-509 18-278 (611)
20 2pbi_B Guanine nucleotide-bind 100.0 1.4E-31 4.7E-36 271.3 32.8 245 234-498 105-354 (354)
21 2xzm_R RACK1; ribosome, transl 100.0 1E-31 3.5E-36 270.8 30.7 283 227-530 13-319 (343)
22 3frx_A Guanine nucleotide-bind 100.0 1.3E-31 4.3E-36 267.5 30.3 250 229-502 59-318 (319)
23 2hes_X YDR267CP; beta-propelle 100.0 2.9E-31 9.8E-36 266.2 32.0 273 228-530 7-305 (330)
24 3iz6_a 40S ribosomal protein R 100.0 6.3E-32 2.2E-36 276.4 24.8 254 231-503 104-377 (380)
25 1gxr_A ESG1, transducin-like e 100.0 2.4E-30 8.1E-35 257.7 35.1 263 233-530 49-316 (337)
26 3bg1_A Protein SEC13 homolog; 100.0 1.6E-31 5.5E-36 266.3 23.5 249 231-500 9-292 (316)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 6E-31 2E-35 265.5 27.9 252 232-507 58-341 (345)
28 1erj_A Transcriptional repress 100.0 4.2E-30 1.4E-34 264.0 34.7 266 233-530 62-362 (393)
29 3dm0_A Maltose-binding peripla 100.0 1.6E-30 5.6E-35 286.9 33.6 284 226-530 373-672 (694)
30 2hes_X YDR267CP; beta-propelle 100.0 6.2E-31 2.1E-35 263.7 26.8 248 234-501 57-328 (330)
31 2xzm_R RACK1; ribosome, transl 100.0 1E-30 3.5E-35 263.4 28.5 253 230-502 71-341 (343)
32 3zwl_B Eukaryotic translation 100.0 9.9E-30 3.4E-34 256.3 34.8 274 229-530 26-325 (369)
33 3jrp_A Fusion protein of prote 100.0 2E-30 6.8E-35 262.6 29.4 256 228-505 4-291 (379)
34 2ymu_A WD-40 repeat protein; u 100.0 7.6E-30 2.6E-34 274.5 35.5 274 231-530 12-354 (577)
35 1erj_A Transcriptional repress 100.0 5.9E-30 2E-34 263.0 30.5 241 237-501 125-389 (393)
36 2ynn_A Coatomer subunit beta'; 100.0 1.1E-29 3.7E-34 251.6 30.4 244 231-501 51-302 (304)
37 2ymu_A WD-40 repeat protein; u 100.0 1.9E-29 6.4E-34 271.4 34.6 259 231-530 299-559 (577)
38 1sq9_A Antiviral protein SKI8; 100.0 2.2E-29 7.6E-34 257.5 32.4 284 228-530 9-364 (397)
39 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-29 4E-34 252.9 29.3 261 231-509 7-345 (351)
40 1k8k_C P40, ARP2/3 complex 41 100.0 3.4E-29 1.2E-33 253.4 32.1 248 233-503 6-278 (372)
41 1r5m_A SIR4-interacting protei 100.0 3.7E-29 1.3E-33 257.1 31.9 240 233-503 106-363 (425)
42 3dwl_C Actin-related protein 2 100.0 2.6E-30 8.9E-35 262.9 22.0 243 234-500 10-280 (377)
43 3gre_A Serine/threonine-protei 100.0 3.1E-30 1.1E-34 268.0 22.2 268 232-509 60-367 (437)
44 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-28 4.5E-33 242.7 32.4 258 228-530 11-276 (313)
45 3v7d_B Cell division control p 100.0 1.8E-28 6.2E-33 256.7 35.2 276 230-529 116-442 (464)
46 4gga_A P55CDC, cell division c 100.0 1.3E-28 4.4E-33 255.1 33.0 261 239-507 109-401 (420)
47 4e54_B DNA damage-binding prot 100.0 1E-29 3.5E-34 264.7 24.6 267 230-530 114-410 (435)
48 4ggc_A P55CDC, cell division c 100.0 2.5E-28 8.5E-33 241.4 32.3 256 239-502 29-316 (318)
49 4ery_A WD repeat-containing pr 100.0 2E-28 6.8E-33 242.7 30.3 243 231-500 61-311 (312)
50 3ei3_B DNA damage-binding prot 100.0 7.1E-29 2.4E-33 253.2 27.7 267 229-530 67-362 (383)
51 4aow_A Guanine nucleotide-bind 100.0 2.2E-28 7.6E-33 244.2 30.6 247 230-503 81-339 (340)
52 2pm9_A Protein WEB1, protein t 100.0 2.7E-29 9.3E-34 258.3 24.5 250 234-505 66-341 (416)
53 4aez_A CDC20, WD repeat-contai 100.0 3E-28 1E-32 250.6 31.9 264 233-530 89-359 (401)
54 2pm9_A Protein WEB1, protein t 100.0 1.3E-28 4.4E-33 253.3 29.1 267 236-530 13-315 (416)
55 3dm0_A Maltose-binding peripla 100.0 1.3E-28 4.5E-33 271.6 30.9 244 230-500 425-692 (694)
56 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-28 6.5E-33 274.4 32.2 268 229-530 7-280 (814)
57 4a11_B DNA excision repair pro 100.0 3.2E-28 1.1E-32 248.9 31.2 260 230-508 38-372 (408)
58 3dw8_B Serine/threonine-protei 100.0 6.7E-29 2.3E-33 258.0 25.7 267 234-506 27-378 (447)
59 1gxr_A ESG1, transducin-like e 100.0 6E-28 2E-32 240.3 31.2 240 234-500 96-336 (337)
60 3i2n_A WD repeat-containing pr 100.0 1.9E-28 6.5E-33 246.2 27.7 281 231-530 14-331 (357)
61 1r5m_A SIR4-interacting protei 100.0 3.1E-28 1E-32 250.2 29.7 266 234-530 44-340 (425)
62 1sq9_A Antiviral protein SKI8; 100.0 2.9E-28 1E-32 249.1 28.7 250 230-503 57-397 (397)
63 3vl1_A 26S proteasome regulato 100.0 1.9E-28 6.5E-33 252.6 27.0 262 240-530 102-395 (420)
64 3vl1_A 26S proteasome regulato 100.0 2.1E-28 7.1E-33 252.4 27.0 258 236-529 57-344 (420)
65 4aez_A CDC20, WD repeat-contai 100.0 3.5E-28 1.2E-32 250.2 28.6 244 235-508 134-387 (401)
66 2aq5_A Coronin-1A; WD40 repeat 100.0 7.3E-28 2.5E-32 247.7 29.2 233 229-530 75-323 (402)
67 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-27 5.8E-32 234.7 30.5 247 231-509 55-304 (313)
68 3zwl_B Eukaryotic translation 100.0 1.6E-27 5.6E-32 240.0 30.9 264 231-509 70-354 (369)
69 3k26_A Polycomb protein EED; W 100.0 1.2E-28 4E-33 248.4 21.3 273 232-530 15-345 (366)
70 3k26_A Polycomb protein EED; W 100.0 1.7E-28 5.9E-33 247.1 22.5 241 236-501 70-366 (366)
71 1pgu_A Actin interacting prote 100.0 4.4E-27 1.5E-31 254.1 34.9 255 233-511 16-293 (615)
72 3jro_A Fusion protein of prote 100.0 1.5E-28 5.2E-33 273.6 23.4 252 230-503 4-287 (753)
73 3sfz_A APAF-1, apoptotic pepti 100.0 1.3E-27 4.6E-32 280.0 32.2 245 231-501 611-913 (1249)
74 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-28 3.8E-33 262.2 20.4 242 247-501 173-428 (524)
75 3i2n_A WD repeat-containing pr 100.0 4.4E-28 1.5E-32 243.5 23.4 248 233-504 63-356 (357)
76 1yfq_A Cell cycle arrest prote 100.0 1.7E-27 6E-32 238.1 27.2 266 231-527 7-301 (342)
77 2xyi_A Probable histone-bindin 100.0 2.2E-27 7.6E-32 246.7 28.8 257 231-503 124-412 (430)
78 1k8k_C P40, ARP2/3 complex 41 100.0 5.6E-28 1.9E-32 244.4 23.6 252 230-504 47-364 (372)
79 4h5i_A Guanine nucleotide-exch 100.0 1.4E-27 4.7E-32 243.0 25.9 196 237-502 135-344 (365)
80 2pm7_B Protein transport prote 100.0 5.5E-27 1.9E-31 231.3 28.3 232 279-530 4-264 (297)
81 4g56_B MGC81050 protein; prote 100.0 2.5E-27 8.4E-32 240.3 25.3 253 241-530 11-279 (357)
82 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-26 5.1E-31 241.8 31.8 268 235-530 4-364 (450)
83 3mmy_A MRNA export factor; mRN 100.0 3.2E-26 1.1E-30 230.4 31.5 268 228-530 32-325 (368)
84 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.3E-26 3.2E-30 235.1 35.0 277 230-530 113-417 (445)
85 2j04_B YDR362CP, TAU91; beta p 100.0 4.4E-27 1.5E-31 249.9 25.2 253 231-502 203-518 (524)
86 2oaj_A Protein SNI1; WD40 repe 100.0 7.6E-27 2.6E-31 264.2 28.3 293 231-529 147-631 (902)
87 3ei3_B DNA damage-binding prot 100.0 5.5E-27 1.9E-31 239.1 23.1 242 234-501 117-382 (383)
88 3dwl_C Actin-related protein 2 100.0 1.9E-27 6.4E-32 241.7 18.9 247 230-499 50-377 (377)
89 2oaj_A Protein SNI1; WD40 repe 100.0 2.3E-26 7.9E-31 260.2 29.6 227 231-530 13-281 (902)
90 2aq5_A Coronin-1A; WD40 repeat 99.9 4E-26 1.4E-30 234.6 27.5 225 240-530 39-277 (402)
91 1p22_A F-BOX/WD-repeat protein 99.9 1.5E-25 5E-30 233.1 31.2 247 241-529 137-394 (435)
92 3vu4_A KMHSV2; beta-propeller 99.9 3.2E-26 1.1E-30 231.8 24.6 261 231-503 15-338 (355)
93 3bg1_A Protein SEC13 homolog; 99.9 1.3E-26 4.3E-31 230.8 20.7 231 279-530 8-272 (316)
94 1pgu_A Actin interacting prote 99.9 1.6E-25 5.4E-30 242.0 28.9 266 231-528 59-347 (615)
95 4e54_B DNA damage-binding prot 99.9 1.9E-26 6.6E-31 239.9 20.7 251 231-505 160-434 (435)
96 3jrp_A Fusion protein of prote 99.9 1.8E-25 6E-30 226.2 27.0 234 278-530 5-266 (379)
97 4h5i_A Guanine nucleotide-exch 99.9 1.1E-25 3.7E-30 229.0 24.7 264 237-530 16-322 (365)
98 3dw8_B Serine/threonine-protei 99.9 7.6E-26 2.6E-30 234.9 23.5 246 236-500 94-445 (447)
99 3mkq_A Coatomer beta'-subunit; 99.9 5.6E-25 1.9E-29 246.2 31.0 246 231-503 51-304 (814)
100 3sfz_A APAF-1, apoptotic pepti 99.9 3.6E-26 1.2E-30 267.9 21.7 278 231-530 878-1188(1249)
101 1p22_A F-BOX/WD-repeat protein 99.9 2.5E-25 8.7E-30 231.3 25.0 237 231-506 169-419 (435)
102 1yfq_A Cell cycle arrest prote 99.9 1.2E-24 4.1E-29 217.4 27.2 234 232-498 53-321 (342)
103 4gq1_A NUP37; propeller, trans 99.9 3.7E-26 1.3E-30 234.7 16.5 243 239-499 93-387 (393)
104 3f3f_A Nucleoporin SEH1; struc 99.9 8E-25 2.7E-29 217.7 25.5 211 278-502 5-250 (351)
105 3mmy_A MRNA export factor; mRN 99.9 2.9E-25 1E-29 223.4 21.6 239 231-499 82-344 (368)
106 3gre_A Serine/threonine-protei 99.9 2.3E-25 8E-30 231.2 20.6 244 233-498 109-437 (437)
107 2ovr_B FBW7, F-BOX/WD repeat p 99.9 7.8E-24 2.7E-28 220.5 31.8 253 231-502 155-443 (445)
108 2w18_A PALB2, fancn, partner a 99.9 7.3E-25 2.5E-29 215.8 22.5 186 246-499 144-355 (356)
109 3lrv_A PRE-mRNA-splicing facto 99.9 3.2E-25 1.1E-29 223.0 18.9 201 241-508 42-251 (343)
110 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-24 5.1E-29 226.7 24.3 239 235-500 15-296 (588)
111 2xyi_A Probable histone-bindin 99.9 8.3E-24 2.8E-28 219.7 29.4 237 278-530 122-388 (430)
112 3lrv_A PRE-mRNA-splicing facto 99.9 2.6E-24 9E-29 216.4 24.2 203 236-504 77-295 (343)
113 3bws_A Protein LP49; two-domai 99.9 8.4E-24 2.9E-28 218.9 28.5 262 237-530 124-410 (433)
114 4a11_B DNA excision repair pro 99.9 5.3E-24 1.8E-28 217.5 23.8 222 256-505 22-280 (408)
115 3jro_A Fusion protein of prote 99.9 6.4E-24 2.2E-28 236.3 22.8 234 278-530 3-264 (753)
116 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.9E-23 1.7E-27 215.1 28.1 246 231-504 98-396 (450)
117 1l0q_A Surface layer protein; 99.9 2.7E-22 9.2E-27 204.6 32.7 244 237-510 33-284 (391)
118 1l0q_A Surface layer protein; 99.9 2.6E-22 8.8E-27 204.8 31.9 244 248-530 3-253 (391)
119 3v7d_B Cell division control p 99.9 9.4E-23 3.2E-27 213.2 28.6 241 231-497 199-459 (464)
120 3bws_A Protein LP49; two-domai 99.9 2E-22 6.8E-27 208.5 29.6 247 233-501 167-432 (433)
121 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-23 3.7E-28 220.1 14.7 222 235-489 85-349 (588)
122 3vu4_A KMHSV2; beta-propeller 99.9 2.9E-22 9.9E-27 202.7 24.1 201 279-503 14-273 (355)
123 4ggc_A P55CDC, cell division c 99.9 7.7E-22 2.6E-26 194.6 26.2 209 234-461 66-316 (318)
124 4gga_A P55CDC, cell division c 99.9 8.8E-22 3E-26 203.6 25.7 212 234-464 146-399 (420)
125 2hqs_A Protein TOLB; TOLB, PAL 99.9 5E-21 1.7E-25 198.0 30.0 220 230-531 173-408 (415)
126 4gq1_A NUP37; propeller, trans 99.9 8.5E-22 2.9E-26 202.1 22.6 226 285-530 90-369 (393)
127 2w18_A PALB2, fancn, partner a 99.9 2.7E-20 9.1E-25 183.3 25.8 224 250-530 57-336 (356)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 2.2E-20 7.5E-25 194.2 21.3 212 237-502 38-279 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.1E-19 2.4E-23 181.7 28.7 187 247-505 143-348 (415)
130 1nir_A Nitrite reductase; hemo 99.8 8.6E-19 2.9E-23 187.2 26.8 266 238-530 181-488 (543)
131 3vgz_A Uncharacterized protein 99.8 1.6E-17 5.4E-22 166.3 31.2 258 236-530 41-323 (353)
132 2ojh_A Uncharacterized protein 99.8 5.9E-18 2E-22 164.1 25.5 227 252-506 17-263 (297)
133 1ri6_A Putative isomerase YBHE 99.8 3.8E-17 1.3E-21 162.5 28.3 265 236-530 38-332 (343)
134 2oit_A Nucleoporin 214KDA; NH2 99.8 1.1E-18 3.7E-23 181.4 17.1 197 284-530 36-250 (434)
135 1nir_A Nitrite reductase; hemo 99.8 1.8E-17 6.2E-22 177.0 26.3 239 242-510 144-418 (543)
136 3u4y_A Uncharacterized protein 99.8 5.3E-17 1.8E-21 161.3 24.9 242 240-505 44-308 (331)
137 3u4y_A Uncharacterized protein 99.8 2.2E-16 7.5E-21 156.8 29.2 237 242-505 4-256 (331)
138 2ecf_A Dipeptidyl peptidase IV 99.8 1.7E-17 5.7E-22 183.9 22.7 202 237-509 38-329 (741)
139 3o4h_A Acylamino-acid-releasin 99.8 2.4E-17 8.1E-22 177.7 22.6 234 237-505 23-278 (582)
140 1pby_B Quinohemoprotein amine 99.8 1.2E-16 4E-21 158.5 25.9 239 238-511 36-320 (337)
141 2ojh_A Uncharacterized protein 99.8 2.6E-17 9E-22 159.4 19.8 232 232-492 38-293 (297)
142 1jmx_B Amine dehydrogenase; ox 99.8 2.3E-16 7.8E-21 157.4 27.1 254 241-511 5-335 (349)
143 3hfq_A Uncharacterized protein 99.7 4.6E-16 1.6E-20 155.9 27.4 246 236-506 40-324 (347)
144 1ri6_A Putative isomerase YBHE 99.7 1.9E-16 6.6E-21 157.3 24.2 189 249-504 7-214 (343)
145 1xfd_A DIP, dipeptidyl aminope 99.7 3.3E-17 1.1E-21 180.9 19.4 201 238-508 19-296 (723)
146 3vgz_A Uncharacterized protein 99.7 1.6E-15 5.3E-20 151.7 28.9 226 238-492 91-335 (353)
147 2ecf_A Dipeptidyl peptidase IV 99.7 3.5E-16 1.2E-20 173.2 24.9 252 237-501 110-413 (741)
148 1k32_A Tricorn protease; prote 99.7 5E-16 1.7E-20 178.8 25.0 240 231-504 199-464 (1045)
149 3scy_A Hypothetical bacterial 99.7 1.1E-14 3.8E-19 146.7 31.6 266 236-529 50-360 (361)
150 1pby_B Quinohemoprotein amine 99.7 3.6E-15 1.2E-19 147.7 24.7 193 248-509 2-277 (337)
151 1xfd_A DIP, dipeptidyl aminope 99.7 1.5E-15 5.2E-20 167.6 23.8 253 238-501 63-393 (723)
152 2z3z_A Dipeptidyl aminopeptida 99.7 7E-15 2.4E-19 161.9 28.0 243 236-503 121-437 (706)
153 1k32_A Tricorn protease; prote 99.7 1.9E-15 6.7E-20 173.9 22.9 195 235-503 295-504 (1045)
154 2z3z_A Dipeptidyl aminopeptida 99.7 1.7E-15 5.9E-20 166.8 20.5 211 236-506 82-348 (706)
155 3scy_A Hypothetical bacterial 99.7 4.2E-14 1.4E-18 142.4 27.8 256 245-530 11-315 (361)
156 3pe7_A Oligogalacturonate lyas 99.7 8.3E-15 2.8E-19 148.8 22.0 252 241-505 41-333 (388)
157 1jof_A Carboxy-CIS,CIS-muconat 99.6 2.1E-14 7.3E-19 145.2 21.0 243 237-504 41-344 (365)
158 3o4h_A Acylamino-acid-releasin 99.6 2E-14 6.7E-19 154.8 20.6 202 283-505 20-231 (582)
159 3hfq_A Uncharacterized protein 99.6 8.7E-14 3E-18 139.2 23.7 210 255-530 14-249 (347)
160 1z68_A Fibroblast activation p 99.6 3.7E-15 1.3E-19 164.6 14.6 193 240-505 20-295 (719)
161 4a5s_A Dipeptidyl peptidase 4 99.6 1.4E-14 4.6E-19 160.8 18.5 192 238-503 19-296 (740)
162 1q7f_A NHL, brain tumor CG1071 99.6 6.1E-13 2.1E-17 129.2 27.2 242 234-502 28-281 (286)
163 1jmx_B Amine dehydrogenase; ox 99.6 1E-13 3.6E-18 138.0 20.4 196 289-509 4-292 (349)
164 3c5m_A Oligogalacturonate lyas 99.5 3.7E-13 1.2E-17 136.6 20.9 253 237-505 37-333 (396)
165 3fvz_A Peptidyl-glycine alpha- 99.5 6.6E-12 2.3E-16 125.0 29.3 238 236-501 24-322 (329)
166 1z68_A Fibroblast activation p 99.5 2.2E-13 7.4E-18 150.3 18.9 253 238-501 62-391 (719)
167 2oiz_A Aromatic amine dehydrog 99.5 2.1E-12 7.3E-17 130.5 24.4 255 240-530 54-357 (361)
168 4a5s_A Dipeptidyl peptidase 4 99.5 1.6E-13 5.4E-18 152.2 16.3 203 240-505 66-357 (740)
169 3e5z_A Putative gluconolactona 99.5 1.7E-11 5.8E-16 119.7 27.1 246 238-505 30-290 (296)
170 3azo_A Aminopeptidase; POP fam 99.5 1E-12 3.5E-17 143.4 18.6 210 231-506 19-279 (662)
171 3azo_A Aminopeptidase; POP fam 99.5 2.2E-12 7.7E-17 140.7 21.2 188 244-504 87-328 (662)
172 1jof_A Carboxy-CIS,CIS-muconat 99.5 9.5E-12 3.2E-16 125.7 24.0 190 250-505 5-230 (365)
173 3no2_A Uncharacterized protein 99.4 4.7E-11 1.6E-15 115.8 24.5 232 246-509 4-260 (276)
174 2dg1_A DRP35, lactonase; beta 99.4 3.3E-10 1.1E-14 112.3 31.1 233 237-492 46-301 (333)
175 2xdw_A Prolyl endopeptidase; a 99.4 2.7E-11 9.2E-16 133.6 25.2 204 238-509 127-376 (710)
176 1rwi_B Serine/threonine-protei 99.4 3.1E-11 1.1E-15 115.8 22.3 238 237-504 25-267 (270)
177 2gop_A Trilobed protease; beta 99.4 6.3E-11 2.2E-15 118.0 25.0 228 237-503 60-332 (347)
178 2dg1_A DRP35, lactonase; beta 99.4 4.4E-11 1.5E-15 118.7 23.0 193 236-501 6-213 (333)
179 1xip_A Nucleoporin NUP159; bet 99.4 2.2E-11 7.6E-16 123.0 19.7 178 237-489 39-232 (388)
180 3pe7_A Oligogalacturonate lyas 99.4 5.8E-11 2E-15 120.2 22.9 237 240-500 85-381 (388)
181 2bkl_A Prolyl endopeptidase; m 99.4 3.2E-11 1.1E-15 132.6 22.5 204 237-508 122-357 (695)
182 3fvz_A Peptidyl-glycine alpha- 99.4 1.6E-10 5.4E-15 114.9 25.3 221 284-530 23-301 (329)
183 1q7f_A NHL, brain tumor CG1071 99.4 4.6E-10 1.6E-14 108.7 27.8 220 282-530 27-260 (286)
184 3dsm_A Uncharacterized protein 99.4 4.1E-10 1.4E-14 112.0 27.4 236 241-510 49-310 (328)
185 2gop_A Trilobed protease; beta 99.3 2.4E-10 8.1E-15 113.9 24.4 234 240-504 19-294 (347)
186 3c5m_A Oligogalacturonate lyas 99.3 3E-11 1E-15 122.4 16.8 240 241-504 86-387 (396)
187 2mad_H Methylamine dehydrogena 99.3 4.8E-09 1.6E-13 106.2 29.5 243 240-507 70-356 (373)
188 1xip_A Nucleoporin NUP159; bet 99.3 1.3E-10 4.4E-15 117.5 17.5 180 286-530 39-223 (388)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 3.3E-09 1.1E-13 103.8 25.8 221 237-530 19-277 (314)
190 2z2n_A Virginiamycin B lyase; 99.2 2.4E-08 8.1E-13 96.6 31.4 236 236-504 15-257 (299)
191 3e5z_A Putative gluconolactona 99.2 1.6E-09 5.4E-14 105.6 22.9 208 278-509 21-253 (296)
192 3sjl_D Methylamine dehydrogena 99.2 8.7E-10 3E-14 111.0 21.1 244 241-511 83-373 (386)
193 1qks_A Cytochrome CD1 nitrite 99.2 5E-09 1.7E-13 111.8 27.9 197 243-510 163-382 (567)
194 2bkl_A Prolyl endopeptidase; m 99.2 3.6E-10 1.2E-14 124.2 18.4 195 242-503 74-306 (695)
195 2xdw_A Prolyl endopeptidase; a 99.2 3.5E-09 1.2E-13 116.6 26.1 200 238-503 173-416 (710)
196 3g4e_A Regucalcin; six bladed 99.2 1.6E-08 5.5E-13 98.8 27.7 212 240-529 17-249 (297)
197 1qks_A Cytochrome CD1 nitrite 99.2 8.3E-09 2.8E-13 110.0 27.0 260 240-509 201-546 (567)
198 1yr2_A Prolyl oligopeptidase; 99.2 3E-09 1E-13 117.7 23.7 200 237-506 164-399 (741)
199 3no2_A Uncharacterized protein 99.1 5.8E-09 2E-13 101.0 22.4 189 295-509 4-203 (276)
200 2oiz_A Aromatic amine dehydrog 99.1 9.9E-09 3.4E-13 103.4 24.8 216 238-483 110-360 (361)
201 3hrp_A Uncharacterized protein 99.1 1.6E-08 5.5E-13 103.7 26.7 234 237-499 132-408 (409)
202 2z2n_A Virginiamycin B lyase; 99.1 8.6E-08 2.9E-12 92.6 30.3 232 238-503 59-297 (299)
203 3dsm_A Uncharacterized protein 99.1 4.6E-09 1.6E-13 104.3 21.1 203 254-530 14-234 (328)
204 2qc5_A Streptogramin B lactona 99.1 1.8E-07 6.1E-12 90.4 31.0 236 237-505 21-263 (300)
205 2ghs_A AGR_C_1268P; regucalcin 99.1 5.9E-08 2E-12 96.2 27.7 209 240-529 53-279 (326)
206 3c75_H MADH, methylamine dehyd 99.0 1.1E-08 3.8E-13 104.6 20.7 242 240-508 122-409 (426)
207 1rwi_B Serine/threonine-protei 99.0 5.7E-08 2E-12 92.7 23.4 196 286-504 25-225 (270)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.4E-07 4.9E-12 92.0 24.2 112 389-501 172-299 (314)
209 2qe8_A Uncharacterized protein 99.0 2.6E-08 9E-13 99.4 18.9 209 237-504 18-281 (343)
210 3dr2_A Exported gluconolactona 98.9 1.2E-07 4E-12 92.9 22.3 234 239-495 48-301 (305)
211 3iuj_A Prolyl endopeptidase; h 98.9 5.9E-08 2E-12 106.5 22.0 197 238-504 131-362 (693)
212 2qc5_A Streptogramin B lactona 98.9 9.7E-07 3.3E-11 85.1 28.0 229 238-500 64-299 (300)
213 2hz6_A Endoplasmic reticulum t 98.9 2.8E-10 9.6E-15 115.2 1.2 189 246-509 8-200 (369)
214 1yr2_A Prolyl oligopeptidase; 98.9 1.9E-07 6.4E-12 103.3 23.8 199 239-504 212-444 (741)
215 3hrp_A Uncharacterized protein 98.9 5.8E-07 2E-11 92.0 25.2 203 285-505 131-358 (409)
216 2mad_H Methylamine dehydrogena 98.8 3.2E-06 1.1E-10 85.3 29.9 234 243-510 28-316 (373)
217 1mda_H Methylamine dehydrogena 98.8 2.5E-07 8.5E-12 93.0 20.7 238 258-510 47-355 (368)
218 3g4e_A Regucalcin; six bladed 98.8 5.8E-07 2E-11 87.6 21.9 100 390-490 150-261 (297)
219 3sjl_D Methylamine dehydrogena 98.7 1.3E-06 4.4E-11 87.9 22.7 239 241-511 38-330 (386)
220 2ghs_A AGR_C_1268P; regucalcin 98.7 2.4E-06 8.4E-11 84.4 24.3 184 237-492 91-293 (326)
221 3dr2_A Exported gluconolactona 98.7 1.1E-06 3.7E-11 85.9 20.9 157 280-503 40-226 (305)
222 3iuj_A Prolyl endopeptidase; h 98.7 1.5E-06 5.3E-11 95.2 23.6 199 238-505 177-409 (693)
223 2ece_A 462AA long hypothetical 98.7 5E-06 1.7E-10 84.4 24.2 201 245-509 93-363 (462)
224 1mda_H Methylamine dehydrogena 98.7 4E-07 1.4E-11 91.5 15.8 228 240-480 69-366 (368)
225 3c75_H MADH, methylamine dehyd 98.6 2.6E-06 9E-11 87.0 20.5 235 245-511 82-369 (426)
226 1npe_A Nidogen, entactin; glyc 98.5 0.00014 4.6E-09 69.3 29.1 235 248-509 2-246 (267)
227 2qe8_A Uncharacterized protein 98.5 1.5E-06 5.2E-11 86.5 15.9 226 236-498 67-318 (343)
228 2iwa_A Glutamine cyclotransfer 98.5 8.3E-06 2.8E-10 77.7 20.0 180 286-530 22-215 (266)
229 1kb0_A Quinohemoprotein alcoho 98.5 1.4E-05 4.7E-10 87.2 22.7 110 401-511 329-517 (677)
230 3nol_A Glutamine cyclotransfer 98.5 1.7E-05 5.8E-10 74.8 19.9 178 287-530 45-234 (262)
231 1yiq_A Quinohemoprotein alcoho 98.4 1.8E-05 6.2E-10 86.5 22.1 110 401-511 321-515 (689)
232 3nok_A Glutaminyl cyclase; bet 98.4 2.8E-05 9.4E-10 73.4 19.8 178 286-530 56-244 (268)
233 3mbr_X Glutamine cyclotransfer 98.4 0.0001 3.6E-09 68.7 22.8 180 285-530 21-213 (243)
234 2hz6_A Endoplasmic reticulum t 98.4 5.5E-08 1.9E-12 98.2 0.5 147 295-510 8-158 (369)
235 2ece_A 462AA long hypothetical 98.4 6.9E-05 2.4E-09 76.1 23.0 116 392-508 141-296 (462)
236 2fp8_A Strictosidine synthase; 98.4 0.00014 4.7E-09 71.4 25.0 209 238-509 21-276 (322)
237 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.0002 6.9E-09 71.7 26.2 237 246-509 52-304 (376)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.3 9.1E-05 3.1E-09 74.2 22.9 233 246-510 102-346 (376)
239 1kb0_A Quinohemoprotein alcoho 98.3 3.8E-05 1.3E-09 83.8 21.1 78 409-487 457-536 (677)
240 2iwa_A Glutamine cyclotransfer 98.3 0.00014 4.6E-09 69.3 22.2 189 240-502 25-238 (266)
241 1fwx_A Nitrous oxide reductase 98.3 3.5E-05 1.2E-09 81.0 19.6 236 245-513 99-383 (595)
242 3hxj_A Pyrrolo-quinoline quino 98.2 9E-05 3.1E-09 72.4 20.6 217 247-502 107-325 (330)
243 3hxj_A Pyrrolo-quinoline quino 98.1 0.00018 6.3E-09 70.1 20.2 184 296-509 107-291 (330)
244 1yiq_A Quinohemoprotein alcoho 98.1 8.7E-05 3E-09 81.1 19.5 79 408-487 454-534 (689)
245 1npe_A Nidogen, entactin; glyc 98.0 0.0026 8.8E-08 60.2 25.4 219 238-483 38-263 (267)
246 1fwx_A Nitrous oxide reductase 98.0 0.00045 1.5E-08 72.6 20.6 115 390-505 278-435 (595)
247 2ad6_A Methanol dehydrogenase 98.0 0.00065 2.2E-08 72.3 22.3 110 401-511 318-504 (571)
248 2p4o_A Hypothetical protein; p 97.9 0.0026 9E-08 61.7 24.3 224 240-492 36-279 (306)
249 4a2l_A BT_4663, two-component 97.9 0.019 6.4E-07 63.6 33.6 246 237-505 216-484 (795)
250 3qqz_A Putative uncharacterize 97.9 0.0036 1.2E-07 59.0 23.5 202 236-499 27-251 (255)
251 3nok_A Glutaminyl cyclase; bet 97.8 0.00045 1.6E-08 65.1 15.3 121 390-515 56-178 (268)
252 3nol_A Glutamine cyclotransfer 97.8 0.00049 1.7E-08 64.8 15.1 122 390-514 44-168 (262)
253 2fp8_A Strictosidine synthase; 97.8 0.0033 1.1E-07 61.3 21.9 108 390-501 186-313 (322)
254 3v65_B Low-density lipoprotein 97.8 0.029 9.9E-07 56.3 29.4 231 249-509 89-326 (386)
255 3amr_A 3-phytase; beta-propell 97.8 0.013 4.3E-07 57.6 25.4 121 390-511 129-274 (355)
256 1w6s_A Methanol dehydrogenase 97.8 0.0024 8.2E-08 68.2 22.0 63 449-511 451-513 (599)
257 3mbr_X Glutamine cyclotransfer 97.8 0.00098 3.4E-08 62.1 16.6 124 389-514 21-146 (243)
258 1kv9_A Type II quinohemoprotei 97.7 0.0013 4.5E-08 71.4 19.8 62 450-511 437-498 (668)
259 1flg_A Protein (quinoprotein e 97.7 0.0023 7.8E-08 68.3 20.6 61 450-510 465-525 (582)
260 1k3i_A Galactose oxidase precu 97.7 0.0062 2.1E-07 65.9 24.3 246 240-505 190-501 (656)
261 4a2l_A BT_4663, two-component 97.7 0.029 9.9E-07 62.1 29.6 239 237-504 264-529 (795)
262 3v64_C Agrin; beta propeller, 97.6 0.065 2.2E-06 52.9 29.0 240 239-509 37-283 (349)
263 2xe4_A Oligopeptidase B; hydro 97.6 0.0092 3.1E-07 65.7 24.5 243 238-504 176-461 (751)
264 3v9f_A Two-component system se 97.5 0.07 2.4E-06 58.8 30.0 246 237-505 259-528 (781)
265 1kv9_A Type II quinohemoprotei 97.5 0.0054 1.9E-07 66.5 20.2 201 247-509 66-341 (668)
266 1flg_A Protein (quinoprotein e 97.4 0.0037 1.3E-07 66.6 17.7 80 407-487 464-545 (582)
267 3v9f_A Two-component system se 97.4 0.13 4.4E-06 56.7 30.0 240 237-505 212-482 (781)
268 3qqz_A Putative uncharacterize 97.4 0.059 2E-06 50.6 23.3 187 279-530 21-233 (255)
269 3tc9_A Hypothetical hydrolase; 97.4 0.005 1.7E-07 63.0 17.0 112 389-501 179-301 (430)
270 2xe4_A Oligopeptidase B; hydro 97.3 0.0026 8.9E-08 70.1 14.9 108 392-501 224-354 (751)
271 2p9w_A MAL S 1 allergenic prot 97.3 0.019 6.6E-07 55.8 19.1 110 391-501 65-215 (334)
272 3tc9_A Hypothetical hydrolase; 97.3 0.083 2.8E-06 53.8 25.2 199 237-506 138-375 (430)
273 3sov_A LRP-6, low-density lipo 97.3 0.12 4E-06 50.4 24.9 202 239-509 38-246 (318)
274 4hw6_A Hypothetical protein, I 97.2 0.15 5E-06 52.0 26.2 108 391-500 275-432 (433)
275 3p5b_L Low density lipoprotein 97.2 0.23 7.8E-06 50.0 30.4 226 255-509 90-328 (400)
276 1ijq_A LDL receptor, low-densi 97.1 0.21 7.2E-06 48.3 30.5 223 257-508 10-245 (316)
277 1w6s_A Methanol dehydrogenase 97.1 0.022 7.6E-07 60.7 19.4 102 407-510 180-351 (599)
278 2ad6_A Methanol dehydrogenase 97.1 0.017 5.7E-07 61.4 18.1 80 407-487 442-523 (571)
279 2p4o_A Hypothetical protein; p 97.0 0.097 3.3E-06 50.3 21.5 109 390-501 73-198 (306)
280 2p9w_A MAL S 1 allergenic prot 97.0 0.091 3.1E-06 51.0 20.3 110 390-501 138-265 (334)
281 2ism_A Putative oxidoreductase 96.9 0.34 1.1E-05 47.8 25.0 243 237-490 32-334 (352)
282 1k3i_A Galactose oxidase precu 96.9 0.049 1.7E-06 58.8 19.8 234 241-490 248-530 (656)
283 3m0c_C LDL receptor, low-densi 96.9 0.76 2.6E-05 50.5 29.2 224 256-508 403-639 (791)
284 2xbg_A YCF48-like protein; pho 96.8 0.12 4E-06 50.5 20.3 108 388-499 204-320 (327)
285 1n7d_A LDL receptor, low-densi 96.7 0.0087 3E-07 65.2 12.1 118 391-509 498-622 (699)
286 4hw6_A Hypothetical protein, I 96.7 0.047 1.6E-06 55.7 16.7 112 389-500 182-303 (433)
287 3sre_A PON1, serum paraoxonase 96.6 0.41 1.4E-05 47.2 22.4 108 390-500 166-297 (355)
288 3sov_A LRP-6, low-density lipo 96.5 0.44 1.5E-05 46.2 22.0 112 390-502 80-198 (318)
289 3kya_A Putative phosphatase; s 96.4 0.08 2.7E-06 54.7 16.7 111 390-500 187-340 (496)
290 3kya_A Putative phosphatase; s 96.4 1 3.5E-05 46.4 25.8 116 389-506 310-480 (496)
291 4a0p_A LRP6, LRP-6, low-densit 96.1 1.8 6.2E-05 46.2 28.3 231 249-507 8-243 (628)
292 1ijq_A LDL receptor, low-densi 96.0 1.2 4.1E-05 42.9 21.9 114 389-502 30-153 (316)
293 3v65_B Low-density lipoprotein 95.8 1.5 5.2E-05 43.5 22.2 198 238-463 118-321 (386)
294 3sre_A PON1, serum paraoxonase 95.8 0.75 2.6E-05 45.3 19.3 94 408-504 138-256 (355)
295 3s94_A LRP-6, low-density lipo 95.7 1.2 4.2E-05 47.4 22.3 199 239-506 43-248 (619)
296 2xzh_A Clathrin heavy chain 1; 95.6 1.7 5.9E-05 41.9 26.5 222 257-511 49-300 (365)
297 3pbp_A Nucleoporin NUP82; beta 95.5 0.34 1.2E-05 48.6 15.6 128 397-530 29-189 (452)
298 1bpo_A Protein (clathrin); cla 95.4 2.6 8.7E-05 42.5 25.5 223 256-511 47-299 (494)
299 3m0c_C LDL receptor, low-densi 95.3 2.5 8.4E-05 46.4 23.3 117 387-503 469-591 (791)
300 3amr_A 3-phytase; beta-propell 95.3 0.89 3E-05 44.5 17.5 92 408-500 98-209 (355)
301 3pbp_A Nucleoporin NUP82; beta 95.1 0.38 1.3E-05 48.2 14.5 108 390-497 67-208 (452)
302 2xbg_A YCF48-like protein; pho 95.0 2.7 9.1E-05 40.6 24.1 111 388-503 162-280 (327)
303 3v64_C Agrin; beta propeller, 95.0 2.9 9.9E-05 40.8 23.7 196 239-462 76-277 (349)
304 3a9g_A Putative uncharacterize 94.9 3.1 0.00011 40.8 25.8 244 237-489 30-330 (354)
305 1cru_A Protein (soluble quinop 94.9 2.7 9.4E-05 42.8 20.8 31 284-314 26-56 (454)
306 2vpj_A Kelch-like protein 12; 94.7 2.9 9.8E-05 39.5 19.9 95 409-507 175-284 (301)
307 1tl2_A L10, protein (tachylect 94.7 0.39 1.3E-05 43.7 12.2 96 391-492 90-201 (236)
308 1n7d_A LDL receptor, low-densi 94.3 0.17 5.9E-06 54.9 10.7 111 392-502 456-572 (699)
309 3p5b_L Low density lipoprotein 94.2 5 0.00017 40.0 25.6 203 238-464 114-324 (400)
310 3s94_A LRP-6, low-density lipo 94.2 5.8 0.0002 42.1 22.2 115 389-503 84-204 (619)
311 3a9g_A Putative uncharacterize 94.2 1.1 3.6E-05 44.2 15.3 27 285-312 29-55 (354)
312 3ei3_A DNA damage-binding prot 94.1 11 0.00036 43.3 31.4 118 390-509 515-646 (1158)
313 3das_A Putative oxidoreductase 93.8 2.7 9.2E-05 41.1 17.1 37 280-316 27-63 (347)
314 2g8s_A Glucose/sorbosone dehyd 93.5 6 0.00021 38.6 26.5 64 425-488 267-340 (353)
315 3ii7_A Kelch-like protein 7; p 93.2 5.7 0.00019 37.4 20.7 96 409-508 169-279 (306)
316 2g8s_A Glucose/sorbosone dehyd 93.0 1.9 6.4E-05 42.3 14.8 29 285-313 18-46 (353)
317 3ott_A Two-component system se 93.0 11 0.00038 40.8 22.6 111 389-504 146-263 (758)
318 1tl2_A L10, protein (tachylect 93.0 0.088 3E-06 47.9 4.5 101 389-495 41-157 (236)
319 2be1_A Serine/threonine-protei 92.7 0.21 7.2E-06 48.9 7.2 106 399-506 111-236 (339)
320 1zgk_A Kelch-like ECH-associat 92.4 6.2 0.00021 37.3 17.4 95 409-507 184-293 (308)
321 3ei3_A DNA damage-binding prot 92.3 19 0.00065 41.3 30.3 218 247-489 523-755 (1158)
322 2ism_A Putative oxidoreductase 92.3 3.6 0.00012 40.2 15.9 99 388-489 30-153 (352)
323 2be1_A Serine/threonine-protei 91.7 0.18 6.2E-06 49.3 5.4 113 399-511 10-140 (339)
324 2xn4_A Kelch-like protein 2; s 91.6 8.9 0.0003 36.0 20.2 95 409-506 173-281 (302)
325 4a0p_A LRP6, LRP-6, low-densit 91.6 16 0.00054 38.8 26.5 116 389-506 432-554 (628)
326 2vpj_A Kelch-like protein 12; 91.5 8 0.00027 36.2 17.0 94 409-506 128-236 (301)
327 1xi4_A Clathrin heavy chain; a 91.1 5.1 0.00018 46.4 16.7 222 256-510 47-298 (1630)
328 2xzh_A Clathrin heavy chain 1; 90.4 13 0.00045 35.9 25.7 240 241-506 72-337 (365)
329 2uvk_A YJHT; unknown function, 90.2 10 0.00034 36.6 16.7 57 452-510 286-351 (357)
330 3ii7_A Kelch-like protein 7; p 89.4 13 0.00046 34.8 16.5 102 401-506 104-230 (306)
331 1bpo_A Protein (clathrin); cla 89.1 20 0.00069 36.1 26.1 238 241-505 71-335 (494)
332 2zwa_A Leucine carboxyl methyl 88.8 15 0.00052 39.5 18.1 107 399-505 500-639 (695)
333 1zgk_A Kelch-like ECH-associat 88.0 18 0.00061 34.0 17.6 94 409-506 137-245 (308)
334 3das_A Putative oxidoreductase 86.7 24 0.00083 34.2 25.5 246 236-489 32-326 (347)
335 1cru_A Protein (soluble quinop 86.5 11 0.00037 38.2 14.4 102 388-490 26-163 (454)
336 2xn4_A Kelch-like protein 2; s 85.8 21 0.00072 33.3 15.4 104 399-506 108-234 (302)
337 1xi4_A Clathrin heavy chain; a 83.5 33 0.0011 39.9 17.3 238 242-506 72-336 (1630)
338 3ott_A Two-component system se 83.4 53 0.0018 35.3 23.5 113 389-504 419-548 (758)
339 3s25_A Hypothetical 7-bladed b 82.6 33 0.0011 32.4 19.7 98 396-501 152-255 (302)
340 4asc_A Kelch repeat and BTB do 80.7 37 0.0013 31.8 21.1 103 401-507 151-283 (315)
341 2rr3_B OSBP, oxysterol-binding 80.1 0.9 3.1E-05 28.8 1.9 20 4-23 12-31 (47)
342 4asc_A Kelch repeat and BTB do 78.0 45 0.0016 31.2 16.6 94 409-506 117-226 (315)
343 2uvk_A YJHT; unknown function, 78.0 32 0.0011 32.9 13.7 96 409-506 168-299 (357)
344 3no0_A DNA gyrase subunit A; D 77.3 47 0.0016 30.9 22.3 99 401-501 129-246 (276)
345 4gq2_M Nucleoporin NUP120; bet 75.3 37 0.0013 38.0 14.7 36 429-465 236-271 (950)
346 3sbq_A Nitrous-oxide reductase 74.3 5.2 0.00018 41.5 6.7 102 410-512 299-429 (638)
347 3sbq_A Nitrous-oxide reductase 72.9 10 0.00034 39.4 8.4 120 389-509 323-488 (638)
348 4gq2_M Nucleoporin NUP120; bet 72.8 1.2E+02 0.0042 33.7 22.6 37 390-426 237-274 (950)
349 3s25_A Hypothetical 7-bladed b 72.6 65 0.0022 30.4 19.2 100 395-502 110-217 (302)
350 2woz_A Kelch repeat and BTB do 65.6 87 0.003 29.2 18.3 103 401-506 112-236 (318)
351 2wg3_C Hedgehog-interacting pr 63.9 1.1E+02 0.0038 30.8 14.2 103 389-492 14-160 (463)
352 2zwa_A Leucine carboxyl methyl 59.6 42 0.0014 36.0 10.7 104 399-503 451-579 (695)
353 2woz_A Kelch repeat and BTB do 56.2 1.3E+02 0.0044 28.0 22.9 96 409-507 175-293 (318)
354 3uc1_A DNA gyrase subunit A; D 53.3 1.6E+02 0.0053 28.1 21.7 100 401-501 159-279 (327)
355 3q6k_A 43.2 kDa salivary prote 52.8 1.5E+02 0.0052 28.9 12.5 89 410-499 124-251 (381)
356 3b7f_A Glycosyl hydrolase, BNR 51.6 1.1E+02 0.0039 29.5 11.7 107 389-496 55-203 (394)
357 4fhn_B Nucleoporin NUP120; pro 49.8 31 0.0011 39.4 8.0 39 472-510 239-277 (1139)
358 2wg3_C Hedgehog-interacting pr 49.8 2.1E+02 0.0073 28.7 28.6 59 236-295 14-79 (463)
359 3b7f_A Glycosyl hydrolase, BNR 37.4 2.8E+02 0.0097 26.5 12.7 98 399-497 22-143 (394)
360 3f7f_A Nucleoporin NUP120; nuc 37.0 44 0.0015 35.8 6.0 34 429-465 222-255 (729)
361 4fhn_B Nucleoporin NUP120; pro 36.0 35 0.0012 39.0 5.5 37 390-426 239-276 (1139)
362 3zwu_A Alkaline phosphatase PH 35.9 1E+02 0.0035 32.2 8.6 58 431-489 478-549 (592)
363 3f7f_A Nucleoporin NUP120; nuc 33.3 45 0.0015 35.7 5.3 38 471-510 222-259 (729)
364 4a9v_A PHOX; hydrolase, beta-p 32.8 1.4E+02 0.0049 31.0 8.9 61 429-490 476-550 (592)
365 3q6k_A 43.2 kDa salivary prote 32.7 3.6E+02 0.012 26.3 19.4 100 389-489 220-342 (381)
366 1zi0_A DNA gyrase subunit A; b 32.7 3.1E+02 0.011 25.6 23.0 112 389-501 146-277 (307)
367 4hvt_A Ritya.17583.B, post-pro 30.6 5.2E+02 0.018 27.5 21.4 204 287-503 131-383 (711)
368 3uc1_A DNA gyrase subunit A; D 29.6 3.7E+02 0.013 25.4 17.7 100 401-501 111-228 (327)
369 1q47_A Semaphorin 3A; beta pro 28.9 2.1E+02 0.0072 29.1 9.4 65 390-455 405-487 (495)
370 4a9v_A PHOX; hydrolase, beta-p 28.7 2.1E+02 0.0071 29.8 9.2 59 389-448 476-549 (592)
371 3l6v_A GYRA, DNA gyrase subuni 22.2 5.3E+02 0.018 24.8 24.3 69 244-313 4-74 (370)
372 1q47_A Semaphorin 3A; beta pro 21.3 1.7E+02 0.0057 29.8 6.9 62 249-310 423-487 (495)
373 3zwu_A Alkaline phosphatase PH 21.0 2.6E+02 0.0088 29.1 8.4 57 390-447 477-548 (592)
374 1zvt_A Topoisomerase IV subuni 20.9 4.6E+02 0.016 23.6 11.1 100 400-501 45-163 (256)
375 1suu_A DNA gyrase subunit A; t 20.3 5.3E+02 0.018 24.0 23.2 100 400-501 115-231 (312)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6e-35 Score=289.46 Aligned_cols=268 Identities=18% Similarity=0.220 Sum_probs=226.8
Q ss_pred ccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
.++..|.+.|.+++|+|++++|++|+.||.|++||+.+.. ....+.+|..+|.+++|+|++++|++|+.|++|
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-------eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 3577888999999999999999999999999999997543 334678899999999999999999999999999
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
++||+.+++.+..+..+...+.++.+.+... ..++++.++.+.+|+.... ......+.+|.
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~----------------~l~sgs~D~~v~lWd~~~~---~~~~~~~~~h~ 140 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP----------------YVLSGSDDLTVKLWNWENN---WALEQTFEGHE 140 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSS----------------EEEEEETTSCEEEEEGGGT---TEEEEEECCCC
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCC----------------EEEEECCCCeEEEEECCCC---cchhhhhcccC
Confidence 9999999998888888887777777765432 2356778889999986542 12356788999
Q ss_pred CCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEee--cCCceEEEEEeeC-CCCEEEEEeCCCeEEEEeCCCCeE
Q 009614 389 SEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPV-DDNYFISGSIDGKVRIWEVRRCQV 463 (531)
Q Consensus 389 ~~I~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~-d~~~l~sgs~Dg~I~Iwd~~~~~~ 463 (531)
..|.+++|+|. + +|++|+.|++|++||++++.+...+. |...+..+.|+|. ++.+|++|+.|++|+|||++++++
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 99999999994 5 89999999999999998877666553 6688999999873 567999999999999999999987
Q ss_pred E-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 464 V-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 464 ~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+ .+.+|...|++++|+|++++|++|+.||+|+|||+.+++++..+... ...+..++|.|
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--------~~~~~~~~~~~ 280 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG--------LERSWCIATHP 280 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCS--------SSSEEEEEECT
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCC--------CccEEEEEECC
Confidence 7 57889999999999999999999999999999999999988765432 34566666655
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4e-35 Score=303.37 Aligned_cols=266 Identities=20% Similarity=0.295 Sum_probs=232.6
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+|...+.+++|+|++.++++|+.||.|+|||+.++. ....+.+|.+.|++++|+|++++|++|+.||+|+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-------~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-------FERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-------CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 467788999999999999999999999999999998544 2356889999999999999999999999999999
Q ss_pred EEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 310 VWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
+||+.+++.+..+..+...+.++.+.++.. ..++++.++.+.+|+... ...+..+.+|..
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~----------------~l~s~s~D~~i~~wd~~~----~~~~~~~~~h~~ 235 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMPNGD----------------HIVSASRDKTIKMWEVQT----GYCVKTFTGHRE 235 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSS----------------EEEEEETTSEEEEEETTT----CCEEEEEECCSS
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeCCCC----------------EEEEEeCCCeEEEEECCC----CcEEEEEeCCCc
Confidence 999999988888887777777777765432 235667888999998865 345778899999
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCC-------------------CCEEEEEe
Q 009614 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVD-------------------DNYFISGS 448 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d-------------------~~~l~sgs 448 (531)
.|.++.++|++ +|++|+.|++|++||+.++++...+. |...|.+++|+|.. +.+|++|+
T Consensus 236 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs 315 (410)
T 1vyh_C 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence 99999999999 99999999999999999999988885 99999999999931 67999999
Q ss_pred CCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEE
Q 009614 449 IDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQ 527 (531)
Q Consensus 449 ~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~ 527 (531)
.|+.|++||+++++++ .+.+|...|++++|+|+|++|++|+.||.|++||+.+++++..+. .|...|++++
T Consensus 316 ~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~--------~h~~~v~~l~ 387 (410)
T 1vyh_C 316 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN--------AHEHFVTSLD 387 (410)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE--------CCSSCEEEEE
T ss_pred CCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc--------CCCCcEEEEE
Confidence 9999999999999877 578899999999999999999999999999999999988776543 3456899999
Q ss_pred Eee
Q 009614 528 VVK 530 (531)
Q Consensus 528 f~p 530 (531)
|+|
T Consensus 388 ~~~ 390 (410)
T 1vyh_C 388 FHK 390 (410)
T ss_dssp ECS
T ss_pred EcC
Confidence 987
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=290.40 Aligned_cols=268 Identities=15% Similarity=0.250 Sum_probs=227.2
Q ss_pred ccceeeeccccceeeeCC----CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC
Q 009614 229 GAMARIIDRHGSATLKPG----DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspd----g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~ 304 (531)
+....|.+.|.+++|+|+ +.+|++|+.|++|+||++...... ....+.+|...|.+++|++++.++++++.
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~-----~~~~l~gh~~~v~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD-----LQWSLEGHQLGVVSVDISHTLPIAASSSL 100 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE-----EEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee-----eeeeeccCCCCEEEEEECCCCCEEEEEeC
Confidence 345568899999999885 668999999999999998754322 22357899999999999999999999999
Q ss_pred CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
|++|++||+.+++.+..+..+...+.++.+.++.. ..+.++.++.+.+|+... .+....+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~----------------~l~~g~~dg~v~i~~~~~----~~~~~~~ 160 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ----------------YLATGTHVGKVNIFGVES----GKKEYSL 160 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSS----------------EEEEECTTSEEEEEETTT----CSEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCC----------------EEEEEcCCCcEEEEEcCC----CceeEEe
Confidence 99999999999998888877777677777665442 224456677888887765 3446677
Q ss_pred ecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 385 QGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 385 ~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
..|...|.+++|+|++ +|++++.|+.|++||+++++++..+. |...|++++|+| ++++|++|+.|+.|+|||+++++
T Consensus 161 ~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 161 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCC
T ss_pred cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcc
Confidence 8899999999999999 99999999999999999999998886 899999999999 99999999999999999999987
Q ss_pred EE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 463 VV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 463 ~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.+ .+.+|...|++++|+|++++|++|+.||+|+|||+.+++++..+. .+...|++++|+|
T Consensus 240 ~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--------~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 240 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF--------DHQDQVWGVKYNG 300 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--------CCSSCEEEEEECT
T ss_pred eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc--------CCCCcEEEEEECC
Confidence 76 578899999999999999999999999999999999998877653 2346789999876
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.6e-34 Score=289.56 Aligned_cols=266 Identities=18% Similarity=0.299 Sum_probs=221.6
Q ss_pred cccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCc
Q 009614 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT 307 (531)
Q Consensus 228 ~~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~ 307 (531)
...+.+|...+.+++|+|++++|++|+.||.|+|||..... ....+..|...|.+++|+|++++|++|+.|+.
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~ 120 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN-------KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC-------EEEEEECSSSCEEEEEECTTSSEEEEEETTCE
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC-------cceEeecCCccEEEEEECCCCCEEEEEeCCCe
Confidence 34577788899999999999999999999999999987543 23457889999999999999999999999999
Q ss_pred EEEEEcccCc----cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 308 VRVWKVIEHE----RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 308 I~iWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
|++|++.+.. ....+..+...+.++.+.+.. ..+.++.++.+.+|+.... +.+..
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------------~l~s~s~d~~i~~wd~~~~----~~~~~ 179 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-----------------QIVTSSGDTTCALWDIETG----QQTTT 179 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-----------------EEEEEETTSCEEEEETTTT----EEEEE
T ss_pred EEEEECccCCCcceeEEEecCCCccEEEEEECCCC-----------------cEEEEECCCcEEEEECCCC----cEEEE
Confidence 9999997653 223334444444444443321 1356677889999987653 45678
Q ss_pred eecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCC
Q 009614 384 FQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (531)
Q Consensus 384 ~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~ 461 (531)
+.+|.+.|.+++|+|++ +|++|+.|++|++||++++.++..+. |...|++++|+| ++++|++|+.||+|+|||++++
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCC
Confidence 89999999999999999 99999999999999999999998886 999999999999 9999999999999999999998
Q ss_pred eEEEecCC---CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 462 QVVDYTDI---REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 462 ~~~~~~~~---~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+.+....+ ...|++++|+|+|++|++|+.||.|++||+.+++.+..+. .|...|++++|+|
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~--------~h~~~v~~~~~s~ 322 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA--------GHDNRVSCLGVTD 322 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--------CCSSCEEEEEECT
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee--------cCCCcEEEEEEcC
Confidence 87754333 3479999999999999999999999999999988766443 3457899999986
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.8e-34 Score=284.42 Aligned_cols=280 Identities=18% Similarity=0.232 Sum_probs=234.2
Q ss_pred cccccceeeeccccceeeeCCC-CeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC
Q 009614 226 KKLGAMARIIDRHGSATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (531)
Q Consensus 226 ~~~~~~~~~~~~~~s~~fspdg-~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~ 304 (531)
.....+.+|.+.|.+++|+|++ .+|++|+.|++|++|++...... .......+.+|...|++++|+|+|++|++|+.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK--FGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE--EEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc--ccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 3345678899999999999976 79999999999999998643322 12234568899999999999999999999999
Q ss_pred CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
|++|++||+.+++.+..+..+...+.++.+.+.. ...++++.++.+.+|+.+ ...+..+
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~----------------~~l~s~s~D~~i~vwd~~-----~~~~~~~ 144 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA----------------SMIISGSRDKTIKVWTIK-----GQCLATL 144 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS----------------CEEEEEETTSCEEEEETT-----SCEEEEE
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC----------------CEEEEEeCCCeEEEEECC-----CCeEEEE
Confidence 9999999999999888888777777776665433 123567788889999764 3567788
Q ss_pred ecCCCCeeEEEEcCC------C-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEE
Q 009614 385 QGHSSEVLDLSWSKN------G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (531)
Q Consensus 385 ~~h~~~I~~l~~sp~------~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iw 456 (531)
.+|...|.++.++|. + .|++++.|++|++||+++.+....+. |...|++++|+| ++++|++|+.||.|+||
T Consensus 145 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iw 223 (319)
T 3frx_A 145 LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLW 223 (319)
T ss_dssp CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEE
T ss_pred eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEE
Confidence 999999999999984 3 79999999999999999998888775 999999999999 99999999999999999
Q ss_pred eCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 457 EVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 457 d~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
|+.+++.+....+...|.+++|+|++.+|++++.+ .+++|++..+.++........+..+.+...+++++|+|
T Consensus 224 d~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 296 (319)
T 3frx_A 224 NLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSA 296 (319)
T ss_dssp ETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECT
T ss_pred ECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECC
Confidence 99999988766667889999999999999988755 59999999988887766555444445567889999987
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=287.50 Aligned_cols=247 Identities=14% Similarity=0.189 Sum_probs=202.7
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~ 313 (531)
+...+.+++|+|++ .+++|+.||.|+|||+.+...... ....+.+|.+.|++|+|+|+|++|++|+.||+|++||+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~---~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIV---SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEE---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeE---eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 44567889999985 678999999999999986553211 12245689999999999999999999999999999999
Q ss_pred ccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe--ecCCCCe
Q 009614 314 IEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF--QGHSSEV 391 (531)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~I 391 (531)
.+++.+..+..+...+.++.+.+..... .++++.|+.+.+|+.+... +...+ ..|...+
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~---------------l~s~s~D~~v~iwd~~~~~----~~~~~~~~~~~~~~ 217 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSV---------------FLSCSEDNRILLWDTRCPK----PASQIGCSAPGYLP 217 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTE---------------EEEEETTSCEEEEETTSSS----CEEECC----CCCE
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCc---------------eeeeccccccccccccccc----eeeeeecceeeccc
Confidence 9999998888888888887776654332 2456678889999876533 34443 3456679
Q ss_pred eEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCC-CEEEEEeCCCeEEEEeCCCCeEEEec
Q 009614 392 LDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDD-NYFISGSIDGKVRIWEVRRCQVVDYT 467 (531)
Q Consensus 392 ~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~-~~l~sgs~Dg~I~Iwd~~~~~~~~~~ 467 (531)
.+++|+|++ +|++|+.|++|++||+++++++..+. |...|++|+|+| ++ ++|++|+.|++|+|||+.+++++.+.
T Consensus 218 ~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp-~g~~~lasgs~D~~i~vwd~~~~~~~~~~ 296 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSP-HSVPFLASLSEDCSLAVLDSSLSELFRSQ 296 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECS-SSSCCEEEEETTSCEEEECTTCCEEEEEC
T ss_pred eeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCcEEEEc
Confidence 999999965 88999999999999999999998886 999999999999 65 68999999999999999999999999
Q ss_pred CCCCceEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeE
Q 009614 468 DIREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~-~l~sgs~dg~I~iwd~~~~~l 504 (531)
+|...|++++|+|+++ +|++++.||+|++|++.+..+
T Consensus 297 ~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 297 AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 9999999999999986 567899999999999987544
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.9e-34 Score=287.62 Aligned_cols=277 Identities=15% Similarity=0.145 Sum_probs=211.7
Q ss_pred ccccccccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCc----ccccccccceEEcccCCCEEEEEEccCCCE
Q 009614 223 GWLKKLGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQS----RELSSLYTGQEFLAHEGSILTMKFSLDGQY 298 (531)
Q Consensus 223 ~w~~~~~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~----~~~~~~~~~~~l~~H~~~I~~l~fspdg~~ 298 (531)
.|..+.....++...+.+++|+|||++|++++ |+++++|+..... ..............|...|.+++|+|++ .
T Consensus 18 ~w~~~~~~~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~ 95 (344)
T 4gqb_B 18 EWNLPPNAPACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-G 95 (344)
T ss_dssp -----CCSCSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-E
T ss_pred ccCCCCCCcccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-e
Confidence 34433344455666788899999999999887 6777777632110 0000111112334577889999999985 7
Q ss_pred EEEEeCCCcEEEEEcccCcccccee----cCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccc
Q 009614 299 LASGGEDGTVRVWKVIEHERLDGFD----VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (531)
Q Consensus 299 Lasgs~Dg~I~iWd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (531)
|++|+.||+|+|||+.+++...... .+...+.++.|.++. ..+++++.++.+.+|+...
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg----------------~~l~sgs~d~~i~iwd~~~- 158 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG----------------TQAVSGSKDICIKVWDLAQ- 158 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS----------------SEEEEEETTSCEEEEETTT-
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC----------------CEEEEEeCCCeEEEEECCC-
Confidence 8899999999999999887654432 345555566555433 2335677888999998765
Q ss_pred cccCcceeEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEee---cCCceEEEEEeeCCCCEEEEEeC
Q 009614 375 RLLEKPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSI 449 (531)
Q Consensus 375 ~~~~~~~~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~---h~~~V~sv~fsp~d~~~l~sgs~ 449 (531)
.+.+..+.+|.+.|.+++|+|++ +|++++.|++|++||+++++++..+. +...+++++|+|.++++|++|+.
T Consensus 159 ---~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 159 ---QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp ---TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred ---CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 45678899999999999999987 78999999999999999999888774 56679999999977789999999
Q ss_pred CCeEEEEeCCCCeEE-EecCCCCceEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEE
Q 009614 450 DGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQ 527 (531)
Q Consensus 450 Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg-~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~ 527 (531)
||.|+|||+++++++ .+.+|...|++++|+|++ ++|++|+.||+|+|||+.+++++. + +.|...|++++
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-----~----~~H~~~V~~v~ 306 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-----S----QAHRDFVRDAT 306 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-----E----CCCSSCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-----E----cCCCCCEEEEE
Confidence 999999999998766 588899999999999998 579999999999999999988653 1 23557899999
Q ss_pred Eee
Q 009614 528 VVK 530 (531)
Q Consensus 528 f~p 530 (531)
|+|
T Consensus 307 ~sp 309 (344)
T 4gqb_B 307 WSP 309 (344)
T ss_dssp ECS
T ss_pred EeC
Confidence 987
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.9e-33 Score=279.72 Aligned_cols=269 Identities=19% Similarity=0.267 Sum_probs=220.2
Q ss_pred cccccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC
Q 009614 226 KKLGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED 305 (531)
Q Consensus 226 ~~~~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D 305 (531)
+....+.+|...|.+++|+|++.+|++|+.||.|+|||...... ...+..|...|.+++|+|+|.+|++|+.|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~-------~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK-------EHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-------EEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCc-------ceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 34456788999999999999999999999999999999875432 34567799999999999999999999999
Q ss_pred CcEEEEEcccCc------cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 306 GTVRVWKVIEHE------RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 306 g~I~iWd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
+.|++|++.... ....+..+...+.++.|.+.. ...++++.++.+.+|+... .+
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----------------~~l~t~s~D~~v~lwd~~~----~~ 187 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD----------------MQILTASGDGTCALWDVES----GQ 187 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS----------------SEEEEEETTSEEEEEETTT----CC
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCC----------------CEEEEEeCCCcEEEEeCCC----Ce
Confidence 999999986542 122233333334444443322 1345678889999998865 34
Q ss_pred ceeEeecCCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 380 PLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 380 ~~~~~~~h~~~I~~l~~sp~--~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
.+..+.+|...|.+++|+|+ + +|++|+.|++|++||+++++++..+. |...|++++|+| ++++|++|+.|++|++
T Consensus 188 ~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~l 266 (354)
T 2pbi_B 188 LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRL 266 (354)
T ss_dssp EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEE
Confidence 57889999999999999884 5 99999999999999999999998886 999999999999 9999999999999999
Q ss_pred EeCCCCeEEEecC---CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 456 WEVRRCQVVDYTD---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 456 wd~~~~~~~~~~~---~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
||+++.+.+.... +...+++++|+|+|++|++|+.||.|++||+.+++.+..+. .|...|++++|+|
T Consensus 267 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~--------~h~~~v~~l~~sp 336 (354)
T 2pbi_B 267 YDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF--------GHENRVSTLRVSP 336 (354)
T ss_dssp EETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC--------CCSSCEEEEEECT
T ss_pred EECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE--------CCCCcEEEEEECC
Confidence 9999987664332 33478999999999999999999999999999888765432 3457899999987
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.6e-33 Score=283.33 Aligned_cols=265 Identities=15% Similarity=0.193 Sum_probs=200.3
Q ss_pred cccccccccceeeeccccceeeeCCCCeEEeeec------CCeEEEEeCCCCcccccc----------------------
Q 009614 222 RGWLKKLGAMARIIDRHGSATLKPGDHELTLGQR------MRRVRVHPVKKQSRELSS---------------------- 273 (531)
Q Consensus 222 ~~w~~~~~~~~~~~~~~~s~~fspdg~~lasgs~------dg~I~vwd~~~~~~~~~~---------------------- 273 (531)
..|..+....++|...+.+++|+|||++||+|+. |+.|++|+..........
T Consensus 29 ~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~ 108 (357)
T 4g56_B 29 SAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI 108 (357)
T ss_dssp -----------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE
T ss_pred cccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE
Confidence 4455444555677777888888888888888776 667777765433211000
Q ss_pred --------------------cccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEE
Q 009614 274 --------------------LYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLY 333 (531)
Q Consensus 274 --------------------~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~ 333 (531)
........+|.+.|++|+|+|+|++|++|+.||+|++||+.+++.+..+..+...+.++.
T Consensus 109 l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~ 188 (357)
T 4g56_B 109 LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVA 188 (357)
T ss_dssp EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 000112347899999999999999999999999999999999988888887777777777
Q ss_pred EeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC--eEEEEeCCCcE
Q 009614 334 FTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTV 411 (531)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V 411 (531)
+.+.....+ +.++.++.+.+|+....... ....+..|...+.+++|+|++ +|++|+.|+.|
T Consensus 189 ~s~~~~~~~---------------~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i 251 (357)
T 4g56_B 189 ACPGKDTIF---------------LSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNV 251 (357)
T ss_dssp ECTTCSSCE---------------EEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCE
T ss_pred EccCCCcee---------------eeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEeecccce
Confidence 765543322 34566788999987654321 122334577889999999985 88999999999
Q ss_pred EEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEcc-CCCEEEEEe
Q 009614 412 RLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCP-DGKGGIVGT 489 (531)
Q Consensus 412 ~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~sgs 489 (531)
++||+++++++..+. |...|++++|+|...++|++|+.|++|+|||+.+++++...+|...|++|+|+| |+.+|++++
T Consensus 252 ~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 252 SLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp EEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred eEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEc
Confidence 999999999988886 899999999999445789999999999999999999999889999999999999 899999999
Q ss_pred CCCcEEEEeCCCCe
Q 009614 490 MTGNCRFYDIKDNQ 503 (531)
Q Consensus 490 ~dg~I~iwd~~~~~ 503 (531)
.||+|++|++.+..
T Consensus 332 ~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 332 WDHKVLHHHLPSEG 345 (357)
T ss_dssp TTSCEEEEECC---
T ss_pred CCCeEEEEECCCCC
Confidence 99999999997543
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-33 Score=286.52 Aligned_cols=271 Identities=22% Similarity=0.347 Sum_probs=215.7
Q ss_pred ccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
..+.+|.+.|.+++|+|++++|++|+.||+|+|||..... ....+.+|...|.+++|+|+|++|++|+.|+.|
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~-------~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ-------KTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-------EEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------cceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 4567788999999999999999999999999999987543 334688999999999999999999999999999
Q ss_pred EEEEcccCcc-------ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcce
Q 009614 309 RVWKVIEHER-------LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL 381 (531)
Q Consensus 309 ~iWd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (531)
++|++.+... ...+..+...+..+.+.+.. ....++++.++.+.+|+..... .+
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~---------------~~~l~s~s~D~~i~~wd~~~~~----~~ 193 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ---------------ETRLITGSGDQTCVLWDVTTGQ----RI 193 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS---------------SSCEEEECTTSCEEEECTTTCC----EE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCC---------------CCEEEEECCCCcEEEEEcCCCc----EE
Confidence 9999875421 12233333333333332221 1234677889999999987533 23
Q ss_pred eEe-----ecCCCCeeEEEEcC-CC-eEEEEeCCCcEEEEECC-CCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCe
Q 009614 382 HEF-----QGHSSEVLDLSWSK-NG-FLLSSSADKTVRLWQVG-IDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGK 452 (531)
Q Consensus 382 ~~~-----~~h~~~I~~l~~sp-~~-~l~s~s~Dg~V~lwdl~-~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~ 452 (531)
..+ .+|...|.+++|++ ++ +|++|+.|++|++||++ .++++..+. |...|++++|+| ++++|++|+.||+
T Consensus 194 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~ 272 (380)
T 3iz6_a 194 SIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGT 272 (380)
T ss_dssp EEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSC
T ss_pred EEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCe
Confidence 333 67999999999987 55 99999999999999998 456677765 999999999999 9999999999999
Q ss_pred EEEEeCCCCeEEEe-cCC-------CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceee
Q 009614 453 VRIWEVRRCQVVDY-TDI-------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRIT 524 (531)
Q Consensus 453 I~Iwd~~~~~~~~~-~~~-------~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It 524 (531)
|+|||+++++.+.. ..+ ...|++++|+|+|++|++|+.||.|++||+..++.+...... ...|...|+
T Consensus 273 i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~----~~~h~~~v~ 348 (380)
T 3iz6_a 273 CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL----QNSHEGRIS 348 (380)
T ss_dssp EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS----CSSCCCCCC
T ss_pred EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc----cCCCCCceE
Confidence 99999999987743 222 234899999999999999999999999999998877654322 244668899
Q ss_pred eEEEee
Q 009614 525 GFQVVK 530 (531)
Q Consensus 525 ~l~f~p 530 (531)
.++|+|
T Consensus 349 ~l~~s~ 354 (380)
T 3iz6_a 349 CLGLSS 354 (380)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 999987
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-33 Score=288.52 Aligned_cols=243 Identities=18% Similarity=0.315 Sum_probs=209.2
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+|.+.+.+++|+|++.+|++|+.|+.|+|||+.... ....+.+|...|.+++|+|++++|++|+.|++|+
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~-------~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-------CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC-------EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-------eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 455677888899999999999999999999999987433 3345789999999999999999999999999999
Q ss_pred EEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 310 VWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
+||+.++.++..+..+...+.++.+.++. ...++++.++.+.+|+.... .....+.+|..
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g----------------~~l~s~s~D~~v~vwd~~~~----~~~~~~~~h~~ 277 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDG----------------TLIASCSNDQTVRVWVVATK----ECKAELREHRH 277 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTS----------------SEEEEEETTSCEEEEETTTC----CEEEEECCCSS
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCC----------------CEEEEEcCCCeEEEEECCCC----ceeeEecCCCc
Confidence 99999998888877766655555544322 22356677888999987653 45677889999
Q ss_pred CeeEEEEcCC--------------------C-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEE
Q 009614 390 EVLDLSWSKN--------------------G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISG 447 (531)
Q Consensus 390 ~I~~l~~sp~--------------------~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sg 447 (531)
.|.+++|+|+ + +|++|+.|++|++||++++.++..+. |...|++++|+| ++.+|++|
T Consensus 278 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~ 356 (410)
T 1vyh_C 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSC 356 (410)
T ss_dssp CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSCEEEE
T ss_pred eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC-CCCEEEEE
Confidence 9999999995 4 79999999999999999999998886 999999999999 99999999
Q ss_pred eCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 448 SIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 448 s~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
+.|+.|+|||+.+++++ .+.+|...|++++|+|++.+|++|+.||+|+||+++
T Consensus 357 s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 357 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred eCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99999999999988765 577899999999999999999999999999999863
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=275.38 Aligned_cols=242 Identities=21% Similarity=0.276 Sum_probs=211.0
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+.+|...+.+++|+|++.++++|+.|+.|++||+.... ....+.+|...+.+++|+|++++|++|+.||.|++
T Consensus 76 l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~-------~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 76 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK-------QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNI 148 (321)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEE
T ss_pred eccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC-------EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEE
Confidence 45677788899999999999999999999999998543 23457789999999999999999999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
|++.+++....+..+...+.++.+.++.. ..+.++.++.+.+|+... .+.+..+.+|...
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~----------------~lasg~~dg~i~iwd~~~----~~~~~~~~~h~~~ 208 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGK----------------YLASGAIDGIINIFDIAT----GKLLHTLEGHAMP 208 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTT----TEEEEEECCCSSC
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCC----------------EEEEEcCCCeEEEEECCC----CcEEEEEcccCCc
Confidence 99999887777766666566666554432 234566788899998765 3457788999999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-Eec
Q 009614 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYT 467 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~ 467 (531)
|.+++|+|++ +|++++.|++|++||+++++++..+. |...|++++|+| ++.+|++++.|++|+|||+.+++++ .+.
T Consensus 209 v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 209 IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 9999999999 99999999999999999999888886 999999999999 9999999999999999999999887 477
Q ss_pred CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
+|...|++++|+|+|++|++++.||.|+|||+.
T Consensus 288 ~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 288 DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 899999999999999999999999999999963
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-31 Score=265.46 Aligned_cols=266 Identities=19% Similarity=0.310 Sum_probs=222.3
Q ss_pred ccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
..+.+|...+.+++|+|++++|++|+.||.|++|+..... ..+.+.+|...|.+++|+|++++|++|+.||.|
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-------FEKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-------cchhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 3567788889999999999999999999999999987543 234678999999999999999999999999999
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
++||+.+++.+..+..+...+.++.+.+... ..+.++.++.+.+|+... .+.+..+..|.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~ 149 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN----------------LIVSGSFDESVRIWDVKT----GKCLKTLPAHS 149 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSS----------------EEEEEETTSCEEEEETTT----CCEEEEECCCS
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCC----------------EEEEEeCCCcEEEEECCC----CEEEEEecCCC
Confidence 9999999988888877777666666655332 235567788899998765 34567888999
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE
Q 009614 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (531)
Q Consensus 389 ~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~ 465 (531)
..|.+++|+|++ +|++++.|+.|++||+++++++..+. +...+.+++|+| ++++|++++.|+.|++||+.+++.+.
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 999999999999 99999999999999999999888774 667899999999 99999999999999999999998774
Q ss_pred -ecCCCCce---EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 466 -YTDIREIV---SAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 466 -~~~~~~~v---~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+.+|...+ ......+++.+|++|+.||.|++||+.+++++..++ .+...|++++|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--------~h~~~v~~~~~~p 289 (312)
T 4ery_A 229 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ--------GHTDVVISTACHP 289 (312)
T ss_dssp EECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC--------CCSSCEEEEEECS
T ss_pred EEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh--------ccCCcEEEEeecC
Confidence 55665433 223334688999999999999999999998876543 2346788888887
No 14
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.5e-31 Score=267.24 Aligned_cols=278 Identities=18% Similarity=0.267 Sum_probs=222.9
Q ss_pred cceeeeccccceeeeCC-CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 230 AMARIIDRHGSATLKPG-DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspd-g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
++.+|.+.|.+++|+|+ +++||+|+.|++|+||++...... .....+.+.+|...|.+++|+|+|++|++|+.|+.|
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~--~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC--SEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc--cceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 57789999999999998 579999999999999999865433 223445789999999999999999999999999999
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
++|+.....................+.+.. ...+.++.++.+.+|+..... .......+|.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~l~s~s~d~~~~~~d~~~~~---~~~~~~~~~~ 171 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDN----------------RQIVSGSRDKTIKLWNTLGVC---KYTVQDESHS 171 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTS----------------SCEEEEETTSCEEEECTTSCE---EEEECSSSCS
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecC----------------ccceeecCCCeEEEEEeCCCc---eEEEEecccc
Confidence 999998877665555444443333332222 123456677888888765432 2244567799
Q ss_pred CCeeEEEEcCCC---eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE
Q 009614 389 SEVLDLSWSKNG---FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (531)
Q Consensus 389 ~~I~~l~~sp~~---~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~ 464 (531)
..+..++|++++ ++++++.|++|++||+++++++..+. |...|++|+|+| ++++|++|+.||.|++||+++.+.+
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCcee
Confidence 999999999875 78899999999999999999988885 999999999999 9999999999999999999999998
Q ss_pred EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecc-cccCCCceeeeEEEee
Q 009614 465 DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQG-KKKLPGKRITGFQVVK 530 (531)
Q Consensus 465 ~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~-~kk~~~~~It~l~f~p 530 (531)
....+...|.+++|+|++. +++++.|+.|++||++++.++...+..... ....+...|++++|+|
T Consensus 251 ~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 316 (340)
T 4aow_A 251 YTLDGGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 316 (340)
T ss_dssp EEEECSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT
T ss_pred eeecCCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC
Confidence 7777778999999999886 456667999999999999988776543322 2345678999999987
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-32 Score=276.07 Aligned_cols=280 Identities=19% Similarity=0.220 Sum_probs=213.4
Q ss_pred ccceeeec-cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCc
Q 009614 229 GAMARIID-RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT 307 (531)
Q Consensus 229 ~~~~~~~~-~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~ 307 (531)
..+..|.+ .+.+++|+|+|++||+|+.|+.|+||++....... ......+|...|++++|+|+|++||+|+.|++
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~----~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWIC----KSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEE----EEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCccee----eeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 34555665 67789999999999999999999999987543211 11123689999999999999999999999999
Q ss_pred EEEEEcccCc--cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 308 VRVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 308 I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
|+||++.++. .+..+..+...+.++.|.++.. ..++++.++.+.+|+...... ...+..+.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~----------------~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~ 147 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN----------------LLATCSRDKSVWVWEVDEEDE-YECVSVLN 147 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEEECTTSC-EEEEEEEC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC----------------EEEEEECCCeEEEEECCCCCC-eEEEEEec
Confidence 9999987764 4455666666666666655432 235567788888887654221 12356778
Q ss_pred cCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeE--EEEe-ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCC
Q 009614 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRC--LRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (531)
Q Consensus 386 ~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~--l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~ 461 (531)
+|...|.+++|+|++ +|++++.|++|++||++++.. ...+ .|...|++++|+| ++++|++|+.|++|+||+....
T Consensus 148 ~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 148 SHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp CCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECT
T ss_pred CcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccC
Confidence 999999999999999 999999999999999988764 3444 4999999999999 9999999999999999996321
Q ss_pred ---------------eEE-EecC-CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeeccc-ccCCCcee
Q 009614 462 ---------------QVV-DYTD-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGK-KKLPGKRI 523 (531)
Q Consensus 462 ---------------~~~-~~~~-~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~-kk~~~~~I 523 (531)
+++ .+.+ |...|++++|+|++..|++++.|+.|++|+...+.........+..+ ...|...|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V 306 (345)
T 3fm0_A 227 GNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDV 306 (345)
T ss_dssp TCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCE
T ss_pred CCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcE
Confidence 122 2333 78899999999999999999999999999987654221111111111 23466889
Q ss_pred eeEEEee
Q 009614 524 TGFQVVK 530 (531)
Q Consensus 524 t~l~f~p 530 (531)
++++|+|
T Consensus 307 ~~v~~~p 313 (345)
T 3fm0_A 307 NCVAWNP 313 (345)
T ss_dssp EEEEECS
T ss_pred eEeEEeC
Confidence 9999997
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.2e-32 Score=293.92 Aligned_cols=267 Identities=18% Similarity=0.251 Sum_probs=219.5
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC----
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED---- 305 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D---- 305 (531)
.+.+|.+.+.+++|+|+|++||+|+.|++|+|||+...... ....+.+|.++|.+++|+|+|++|++++.+
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~-----~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI-----LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-----EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce-----eeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 35567788999999999999999999999999998643321 223578899999999999999999999875
Q ss_pred CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
+.|++|| ++.....+..+...+.++.|.+.... ..++++.++.+.+|+.... +....+.
T Consensus 129 ~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~---------------~l~s~s~D~~v~lwd~~~~----~~~~~l~ 187 (611)
T 1nr0_A 129 GHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPF---------------RIISGSDDNTVAIFEGPPF----KFKSTFG 187 (611)
T ss_dssp EEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSC---------------EEEEEETTSCEEEEETTTB----EEEEEEC
T ss_pred eEEEEee--CCCCcceecCCCCCceEEEECCCCCe---------------EEEEEeCCCeEEEEECCCC----eEeeeec
Confidence 4677777 45566667777777777777665422 2356778888999986543 3467789
Q ss_pred cCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--------ecCCceEEEEEeeCCCCEEEEEeCCCeEEEE
Q 009614 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (531)
Q Consensus 386 ~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~--------~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iw 456 (531)
+|...|.+++|+|++ +|++++.|++|++||+.+++++..+ .|...|++++|+| ++++|++++.|++|+||
T Consensus 188 ~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 188 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIW 266 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEE
Confidence 999999999999999 9999999999999999999998887 5899999999999 99999999999999999
Q ss_pred eCCCCeEEE--------------------------------------------ecCCCCceEEEEEccCCCEEEEEeCCC
Q 009614 457 EVRRCQVVD--------------------------------------------YTDIREIVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 457 d~~~~~~~~--------------------------------------------~~~~~~~v~~v~~spdg~~l~sgs~dg 492 (531)
|+.+++.+. +.+|...|++++|+|||++|++++.||
T Consensus 267 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 267 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp ETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 999876432 246888999999999999999999999
Q ss_pred cEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 493 NCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 493 ~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+|++||+.+++..... ...+...|++++|+|
T Consensus 347 ~v~~Wd~~~~~~~~~~-------~~~h~~~v~~~~~s~ 377 (611)
T 1nr0_A 347 HINSWDISTGISNRVF-------PDVHATMITGIKTTS 377 (611)
T ss_dssp CEEEEETTTCCEEECS-------SCSCSSCEEEEEECT
T ss_pred cEEEEECCCCceeeec-------ccCCcceEEEEEECC
Confidence 9999999998765432 123456778877753
No 17
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.6e-32 Score=267.70 Aligned_cols=249 Identities=17% Similarity=0.239 Sum_probs=198.3
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc--CCCEEEEEeCCCcE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--DGQYLASGGEDGTV 308 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--dg~~Lasgs~Dg~I 308 (531)
+.+|.+.|.+++|+|+|++||+|+.|+.|+||++..... .....+.+|.++|++++|++ ++++||+|+.||+|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-----~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-----EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 456778889999999999999999999999999874321 23357899999999999986 48999999999999
Q ss_pred EEEEcccCc--cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec
Q 009614 309 RVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (531)
Q Consensus 309 ~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (531)
+|||+.+++ .+..+..+...+.++.|.+..... ..+.++.++.+.+|+...... .....+.+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~--------------~l~s~s~d~~v~~wd~~~~~~--~~~~~~~~ 143 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP--------------MLLVASSDGKVSVVEFKENGT--TSPIIIDA 143 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS--------------EEEEEETTSEEEEEEBCSSSC--BCCEEEEC
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCc--------------EEEEEECCCcEEEEEecCCCc--eeeeeeec
Confidence 999998774 333444455566666665543211 234567788888887654321 12356789
Q ss_pred CCCCeeEEEEcCC-------------C-eEEEEeCCCcEEEEECCCCe----EEEEee-cCCceEEEEEeeCC---CCEE
Q 009614 387 HSSEVLDLSWSKN-------------G-FLLSSSADKTVRLWQVGIDR----CLRVFS-HNNYVTSVAFNPVD---DNYF 444 (531)
Q Consensus 387 h~~~I~~l~~sp~-------------~-~l~s~s~Dg~V~lwdl~~~~----~l~~~~-h~~~V~sv~fsp~d---~~~l 444 (531)
|...|.+++|+|+ + +|++|+.|++|++||++++. .+..+. |...|++++|+| + +.+|
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp-~~~~~~~l 222 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYM 222 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEE
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC-CCCCceEE
Confidence 9999999999996 3 89999999999999998765 455554 999999999999 6 4899
Q ss_pred EEEeCCCeEEEEeCCCCe----EEEe--cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 445 ISGSIDGKVRIWEVRRCQ----VVDY--TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 445 ~sgs~Dg~I~Iwd~~~~~----~~~~--~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
++++.|++|+|||+.+.. ...+ ..|...|.+++|+|+|++|++++.||.|+||+...
T Consensus 223 as~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 999999999999998742 1222 46788999999999999999999999999999863
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.2e-32 Score=271.61 Aligned_cols=242 Identities=18% Similarity=0.273 Sum_probs=207.6
Q ss_pred eeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 009614 232 ARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVW 311 (531)
Q Consensus 232 ~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iW 311 (531)
..|...+.+++|+|++.++++|+.|+.|++|++...... ......+.+|.+.|.++.|++++. |++++.|++|++|
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~w 169 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN---VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALW 169 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS---CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEE
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc---ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEE
Confidence 334556778999999999999999999999999764422 223456889999999999998875 8999999999999
Q ss_pred EcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCe
Q 009614 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (531)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I 391 (531)
|+.+++....+..+...+.++.+.++.. ..++++.++.+.+|+... ...+..+.+|...|
T Consensus 170 d~~~~~~~~~~~~h~~~v~~~~~~~~~~----------------~l~sg~~d~~v~~wd~~~----~~~~~~~~~h~~~v 229 (340)
T 1got_B 170 DIETGQQTTTFTGHTGDVMSLSLAPDTR----------------LFVSGACDASAKLWDVRE----GMCRQTFTGHESDI 229 (340)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTT----CSEEEEECCCSSCE
T ss_pred ECCCCcEEEEEcCCCCceEEEEECCCCC----------------EEEEEeCCCcEEEEECCC----CeeEEEEcCCcCCE
Confidence 9999988888877777776666655431 235667788999998765 34577889999999
Q ss_pred eEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecC---CceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-Ee
Q 009614 392 LDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHN---NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DY 466 (531)
Q Consensus 392 ~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~---~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~ 466 (531)
.+++|+|++ +|++|+.|++|++||+++++.+..+.|. ..|++++|+| ++++|++|+.|+.|++||+.+++.+ .+
T Consensus 230 ~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 230 NAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 999999999 9999999999999999999998888754 4799999999 9999999999999999999988776 57
Q ss_pred cCCCCceEEEEEccCCCEEEEEeCCCcEEEEe
Q 009614 467 TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (531)
Q Consensus 467 ~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd 498 (531)
.+|...|++++|+|+|.+|++|+.||.|+|||
T Consensus 309 ~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 89999999999999999999999999999997
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-31 Score=289.79 Aligned_cols=248 Identities=16% Similarity=0.217 Sum_probs=203.2
Q ss_pred eccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 009614 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (531)
Q Consensus 235 ~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~ 314 (531)
...+.+++|+|+|++||+++ ++.|++|++.... ....+.+|...|++++|+|+|++||+|+.||+|+|||+.
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~-------~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~ 89 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT-------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 89 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSS-------CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESS
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcc-------cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECC
Confidence 34556789999999999987 5799999987432 334688999999999999999999999999999999997
Q ss_pred cCcc--ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCee
Q 009614 315 EHER--LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (531)
Q Consensus 315 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~ 392 (531)
+++. ...+..+...+.++.|.++....+ ..... ....+.+.+|+.. .....+.+|...|.
T Consensus 90 ~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~-~~~~~-----------~~~~~~v~~wd~~------~~~~~l~gh~~~v~ 151 (611)
T 1nr0_A 90 QTTHILKTTIPVFSGPVKDISWDSESKRIA-AVGEG-----------RERFGHVFLFDTG------TSNGNLTGQARAMN 151 (611)
T ss_dssp STTCCEEEEEECSSSCEEEEEECTTSCEEE-EEECC-----------SSCSEEEEETTTC------CBCBCCCCCSSCEE
T ss_pred CCcceeeEeecccCCceEEEEECCCCCEEE-EEECC-----------CCceeEEEEeeCC------CCcceecCCCCCce
Confidence 6543 334556666677777766543211 11100 0112467777742 34567889999999
Q ss_pred EEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec--
Q 009614 393 DLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT-- 467 (531)
Q Consensus 393 ~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~-- 467 (531)
+++|+|++ .|++++.|++|++||..+++++..+. |...|++++|+| ++++|++|+.|++|+|||+.+++.+...
T Consensus 152 ~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~ 230 (611)
T 1nr0_A 152 SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFED 230 (611)
T ss_dssp EEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBC
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeecc
Confidence 99999997 69999999999999999999888886 999999999999 9999999999999999999998877533
Q ss_pred ------CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 468 ------DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 468 ------~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
+|...|++++|+|+|++|++++.|++|+|||+.+++++..+.
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 699999999999999999999999999999999998877654
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.4e-31 Score=271.31 Aligned_cols=245 Identities=20% Similarity=0.285 Sum_probs=209.3
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~ 313 (531)
+...+.+++|+|+|.++++|+.|+.+++|++....... .......+.+|.+.|.+++|+|++.+|++|+.|++|++||+
T Consensus 105 ~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~ 183 (354)
T 2pbi_B 105 PCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNEN-MAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDV 183 (354)
T ss_dssp SSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCC-SGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccc-ccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeC
Confidence 34557789999999999999999999999987543221 12334567899999999999999999999999999999999
Q ss_pred ccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeE
Q 009614 314 IEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (531)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~ 393 (531)
.+++.+..+..+...+.++.+.+..... ..++++.++.+.+|+.+. .+.+..+.+|...|.+
T Consensus 184 ~~~~~~~~~~~h~~~v~~~~~~~~~~g~--------------~l~sgs~Dg~v~~wd~~~----~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 184 ESGQLLQSFHGHGADVLCLDLAPSETGN--------------TFVSGGCDKKAMVWDMRS----GQCVQAFETHESDVNS 245 (354)
T ss_dssp TTCCEEEEEECCSSCEEEEEECCCSSCC--------------EEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEE
T ss_pred CCCeEEEEEcCCCCCeEEEEEEeCCCCC--------------EEEEEeCCCeEEEEECCC----CcEEEEecCCCCCeEE
Confidence 9999888888777777777766543322 235667788999998875 3457788999999999
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeec---CCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-EecC
Q 009614 394 LSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH---NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTD 468 (531)
Q Consensus 394 l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h---~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~ 468 (531)
++|+|++ +|++++.|++|++||+++++.+..+.+ ...+++++|+| ++.+|++|+.|+.|+|||+.+++.+ .+.+
T Consensus 246 v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~ 324 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFG 324 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEEC
Confidence 9999999 999999999999999999988887753 35789999999 9999999999999999999988766 5788
Q ss_pred CCCceEEEEEccCCCEEEEEeCCCcEEEEe
Q 009614 469 IREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (531)
Q Consensus 469 ~~~~v~~v~~spdg~~l~sgs~dg~I~iwd 498 (531)
|...|++++|+|||++|++|+.||+|+||+
T Consensus 325 h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 325 HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999999996
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1e-31 Score=270.80 Aligned_cols=283 Identities=15% Similarity=0.175 Sum_probs=216.4
Q ss_pred ccccceeeeccccceee-----eC-CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEE
Q 009614 227 KLGAMARIIDRHGSATL-----KP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA 300 (531)
Q Consensus 227 ~~~~~~~~~~~~~s~~f-----sp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La 300 (531)
....+.+|.+.|.+++| ++ ++.+|++|+.|++|+||++...............+.+|...|++++|+|++.+|+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 34567788899999998 66 9999999999999999998754432112233456889999999999999999999
Q ss_pred EEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcc
Q 009614 301 SGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (531)
Q Consensus 301 sgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (531)
+|+.|++|++||+.+++.+..+..+...+.++.|.++.. ..+.++.++.+.+|+...... ..
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~----------------~l~s~~~d~~i~~wd~~~~~~--~~ 154 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR----------------QILSAGAEREIKLWNILGECK--FS 154 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT----------------EEEEEETTSCEEEEESSSCEE--EE
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC----------------EEEEEcCCCEEEEEeccCCce--ee
Confidence 999999999999999998888888877777777766542 224566788888888652110 01
Q ss_pred eeEeecCCCCeeEEEEcCCC-----------eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEe
Q 009614 381 LHEFQGHSSEVLDLSWSKNG-----------FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGS 448 (531)
Q Consensus 381 ~~~~~~h~~~I~~l~~sp~~-----------~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs 448 (531)
.....+|...|.+++|+|++ +|++++.|++|++||. ..+....+ .|...|++++|+| ++++|++|+
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs 232 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISP-NGKYIATGG 232 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECC-CCCEEEEEc
Confidence 11123789999999999974 7999999999999995 45555555 4999999999999 999999999
Q ss_pred CCCeEEEEeCCC-CeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee--ecc---cccCCCce
Q 009614 449 IDGKVRIWEVRR-CQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC--LQG---KKKLPGKR 522 (531)
Q Consensus 449 ~Dg~I~Iwd~~~-~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~--~~~---~kk~~~~~ 522 (531)
.||.|+|||+.. ........+...|.+++|+|++.+|+++ .|+.|++|++.+++......+. ... ..+.+...
T Consensus 233 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (343)
T 2xzm_R 233 KDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ 311 (343)
T ss_dssp TTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCC
T ss_pred CCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCc
Confidence 999999999954 3333334456679999999999887655 5888999999887654422211 110 11245567
Q ss_pred eeeEEEee
Q 009614 523 ITGFQVVK 530 (531)
Q Consensus 523 It~l~f~p 530 (531)
|++++|+|
T Consensus 312 v~~~~~sp 319 (343)
T 2xzm_R 312 CTSLAWNA 319 (343)
T ss_dssp EEEEEECS
T ss_pred eEEEEECC
Confidence 99999987
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-31 Score=267.45 Aligned_cols=250 Identities=17% Similarity=0.287 Sum_probs=205.2
Q ss_pred ccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
..+.+|...+.+++|+|++.++++|+.|++|+|||+.++. ..+.+.+|...|.+++|+|++.+|++|+.|++|
T Consensus 59 ~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 131 (319)
T 3frx_A 59 RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE-------TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 131 (319)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred eEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC-------eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 4566788888899999999999999999999999998543 335688999999999999999999999999999
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
++||+. +..+..+..+...+.++.+.+.... .......+.++.++.+.+|+..... ....+.+|.
T Consensus 132 ~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~----------~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~h~ 196 (319)
T 3frx_A 132 KVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA----------DDDSVTIISAGNDKMVKAWNLNQFQ----IEADFIGHN 196 (319)
T ss_dssp EEEETT-SCEEEEECCCSSCEEEEEECCC----------------CCEEEEEETTSCEEEEETTTTE----EEEEECCCC
T ss_pred EEEECC-CCeEEEEeccCCcEEEEEEccCCCC----------CCCccEEEEEeCCCEEEEEECCcch----hheeecCCC
Confidence 999985 4445555555555555555443211 0112234677888999999887643 456788999
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-e
Q 009614 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-Y 466 (531)
Q Consensus 389 ~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~ 466 (531)
..|.+++|+|++ +|++++.|++|++||+.+++++..+.+...|.+++|+| ++.+|++++. +.+++|++.....+. +
T Consensus 197 ~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~~~~la~~~~-~~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 197 SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSP-NRYWLAAATA-TGIKVFSLDPQYLVDDL 274 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECS-SSSEEEEEET-TEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcC-CCCEEEEEcC-CCcEEEEeCcCeeeecc
Confidence 999999999999 99999999999999999999999999888999999999 8999988875 469999999877653 2
Q ss_pred --------cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q 009614 467 --------TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 467 --------~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~ 502 (531)
..+...+.+++|+|||++|++|+.||.|+|||+.++
T Consensus 275 ~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 275 RPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 224567999999999999999999999999998764
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-31 Score=266.15 Aligned_cols=273 Identities=21% Similarity=0.235 Sum_probs=204.0
Q ss_pred cccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEE-cc-cCCCEEEEEEccCCCEEEEEeCC
Q 009614 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEF-LA-HEGSILTMKFSLDGQYLASGGED 305 (531)
Q Consensus 228 ~~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l-~~-H~~~I~~l~fspdg~~Lasgs~D 305 (531)
+..+.+|.+.+.+++|+|+ +||+|+.|+.|++|++...... ....+ .+ |.+.|++++|+|++++|++|+.|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFT-----LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCE-----EEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeE-----EEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 3456678888999999988 9999999999999999753211 12234 34 99999999999999999999999
Q ss_pred CcEEEEEcccC-------ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 306 GTVRVWKVIEH-------ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 306 g~I~iWd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
++|+||++... +....+..+...+.++.|.++. ..+++++.++.+.+|+........
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g----------------~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG----------------YYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS----------------CEEEEEETTSCEEEEECCTTCCCC
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC----------------CEEEEEeCCCEEEEEeccCCCCCe
Confidence 99999998542 2233344444445555554432 234567788899999874322223
Q ss_pred cceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCC--eEEEEee-cCCceEEEEEeeCC--CCEEEEEeCCCe
Q 009614 379 KPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGID--RCLRVFS-HNNYVTSVAFNPVD--DNYFISGSIDGK 452 (531)
Q Consensus 379 ~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~--~~l~~~~-h~~~V~sv~fsp~d--~~~l~sgs~Dg~ 452 (531)
+.+..+.+|...|.+++|+|++ +|++++.|++|++||+.++ +++..+. |...|++++|+| + +.+|++|+.|++
T Consensus 144 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 144 ECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSC
T ss_pred EEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCe
Confidence 4567788999999999999999 9999999999999999876 5666765 999999999999 6 678999999999
Q ss_pred EEEEeCCCC--------eEEE-ecC-CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCc-
Q 009614 453 VRIWEVRRC--------QVVD-YTD-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGK- 521 (531)
Q Consensus 453 I~Iwd~~~~--------~~~~-~~~-~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~- 521 (531)
|+|||+..+ .... +.. |...|++++|++++ +|++++.||.|+||++.+++....... ...+..
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~-----~~~h~~~ 296 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKR-----ALCHGVY 296 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEE-----SCTTTTS
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecc-----ccccccc
Confidence 999998754 2232 333 88899999999765 799999999999999987753211111 112333
Q ss_pred eeeeEEEee
Q 009614 522 RITGFQVVK 530 (531)
Q Consensus 522 ~It~l~f~p 530 (531)
.|+.++|+|
T Consensus 297 ~v~~v~~~~ 305 (330)
T 2hes_X 297 EINVVKWLE 305 (330)
T ss_dssp CEEEEEEC-
T ss_pred eEEEEEEec
Confidence 788999887
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.3e-32 Score=276.40 Aligned_cols=254 Identities=17% Similarity=0.290 Sum_probs=206.3
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC-CCEEEEEeCCCcEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTVR 309 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~Lasgs~Dg~I~ 309 (531)
+..|...+.+++|+|+|+++++|+.|+.|++|++...............+.+|.+.|.++.|+|+ +..|++|+.|++|+
T Consensus 104 ~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~ 183 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCV 183 (380)
T ss_dssp EECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEE
T ss_pred EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEE
Confidence 34566678889999999999999999999999997644333333344568899999999999996 45799999999999
Q ss_pred EEEcccCcccccee-----cCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 310 VWKVIEHERLDGFD-----VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 310 iWd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
+||+.+++.+..+. .+...+.++.+.+.. ....++++.++.+.+|+.+.. ..++..+
T Consensus 184 ~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---------------~~~l~sgs~D~~v~~wd~~~~---~~~~~~~ 245 (380)
T 3iz6_a 184 LWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN---------------ANMFISGSCDTTVRLWDLRIT---SRAVRTY 245 (380)
T ss_dssp EECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS---------------CCEEEEEETTSCEEEEETTTT---CCCCEEE
T ss_pred EEEcCCCcEEEEeecccCCCCccCeEEEEeecCC---------------CCEEEEEECCCeEEEEECCCC---CcceEEE
Confidence 99999988765552 222223333332211 223466788899999987632 3457788
Q ss_pred ecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeec--------CCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 385 QGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH--------NNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 385 ~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h--------~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
.+|.+.|.+++|+|++ +|++|+.|++|++||+++++++..+.. ...|++++|+| ++.+|++|+.||.|+|
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~v 324 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYV 324 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEE
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-CCCEEEEEECCCCEEE
Confidence 9999999999999999 999999999999999999999988752 23489999999 9999999999999999
Q ss_pred EeCCCCeEEE-e----cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 456 WEVRRCQVVD-Y----TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 456 wd~~~~~~~~-~----~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
||+.+++.+. + .+|...|++++|+|+|++|++|+.||+|+||++...+
T Consensus 325 wd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 325 WDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 9999887763 3 5788999999999999999999999999999998654
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.4e-30 Score=257.74 Aligned_cols=263 Identities=16% Similarity=0.173 Sum_probs=218.6
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEc--ccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL--AHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~--~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
.|...+.+++|+|+++++++++ ||.|++|++....... ....+. +|...|.+++|+|++++|++++.||.|++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS----PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS----CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee----eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 4667888999999999999998 9999999998654321 112233 79999999999999999999999999999
Q ss_pred EEcccCc--cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 311 WKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 311 Wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
||+.+++ ....+..+...+.++.+.++.. ..+.++.++.+.+|+.... +.+..+.+|.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------~l~~~~~dg~v~~~d~~~~----~~~~~~~~~~ 183 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSK----------------VCFSCCSDGNIAVWDLHNQ----TLVRQFQGHT 183 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTTT----EEEEEECCCS
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCC----------------EEEEEeCCCcEEEEeCCCC----ceeeeeeccc
Confidence 9998876 3344444444455555544321 2234556778888887653 4567788899
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec
Q 009614 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT 467 (531)
Q Consensus 389 ~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~ 467 (531)
..|.+++|+|++ +|++++.|+.|++||+++++.+..+.+...+.+++|+| ++++|++++.|+.|++||+.+++.....
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEEEEC
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeEEEc
Confidence 999999999999 99999999999999999999999999999999999999 9999999999999999999999988899
Q ss_pred CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.|...|++++|+|++++|++++.||.|++||+.+++.+.... +...|++++|+|
T Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~---------~~~~v~~~~~s~ 316 (337)
T 1gxr_A 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK---------ESSSVLSCDISV 316 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---------CSSCEEEEEECT
T ss_pred CCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec---------CCCcEEEEEECC
Confidence 999999999999999999999999999999999988774321 346788888876
No 26
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-31 Score=266.33 Aligned_cols=249 Identities=18% Similarity=0.197 Sum_probs=194.9
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc--CCCEEEEEeCCCcE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--DGQYLASGGEDGTV 308 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--dg~~Lasgs~Dg~I 308 (531)
+.+|.+.|.+++|+|+|++||+|+.|+.|+|||+...... ....+.+|.+.|++++|++ ++++|++|+.|++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~-----~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-----LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE-----EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE-----EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 4568889999999999999999999999999998754321 2346889999999999986 48999999999999
Q ss_pred EEEEcccCc--cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec
Q 009614 309 RVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (531)
Q Consensus 309 ~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (531)
++||+.++. ....+..+...+.++.|.+..... ..+.++.++.+.+|+...... ......+.+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~--------------~lasgs~D~~i~lwd~~~~~~-~~~~~~~~~ 148 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGL--------------ILACGSSDGAISLLTYTGEGQ-WEVKKINNA 148 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCS--------------CEEEECSSSCEEEEEECSSSC-EEECCBTTS
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCc--------------EEEEEcCCCCEEEEecCCCCC-cceeeeecc
Confidence 999998764 344555666677777777653222 234566778888887653210 011345678
Q ss_pred CCCCeeEEEEcCC-----------------C-eEEEEeCCCcEEEEECCCC---eEEEEee-cCCceEEEEEeeCCC---
Q 009614 387 HSSEVLDLSWSKN-----------------G-FLLSSSADKTVRLWQVGID---RCLRVFS-HNNYVTSVAFNPVDD--- 441 (531)
Q Consensus 387 h~~~I~~l~~sp~-----------------~-~l~s~s~Dg~V~lwdl~~~---~~l~~~~-h~~~V~sv~fsp~d~--- 441 (531)
|...|.+++|+|+ + +|++|+.|++|++||++.. +++..+. |...|++++|+| ++
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~ 227 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIGLP 227 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSSCS
T ss_pred ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCCCC
Confidence 9999999999997 3 8999999999999999765 3555554 999999999999 65
Q ss_pred -CEEEEEeCCCeEEEEeCCCC---e--EEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 442 -NYFISGSIDGKVRIWEVRRC---Q--VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 442 -~~l~sgs~Dg~I~Iwd~~~~---~--~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
.+|++|+.|++|+||++.+. + ...+..|...|++++|+|+|++|++++.||.|+||+..
T Consensus 228 ~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 228 TSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 89999999999999999762 1 12345678899999999999999999999999999986
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=6e-31 Score=265.51 Aligned_cols=252 Identities=17% Similarity=0.219 Sum_probs=195.3
Q ss_pred eeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 009614 232 ARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVW 311 (531)
Q Consensus 232 ~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iW 311 (531)
.+|...+.+++|+|++++|++|+.|+.|+||+...... .....+.+|...|++++|+|++++|++|+.|++|++|
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~-----~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF-----ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVW 132 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe-----EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEE
Confidence 35667788999999999999999999999999874332 2335688999999999999999999999999999999
Q ss_pred EcccCcc---ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 312 KVIEHER---LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 312 d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
|+.++.. +..+..+...+.++.|.++.. ..+.++.++.+.+|+...... .....+.+|.
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~----------------~l~s~s~d~~i~~w~~~~~~~--~~~~~~~~h~ 194 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQE----------------LLASASYDDTVKLYREEEDDW--VCCATLEGHE 194 (345)
T ss_dssp EECTTSCEEEEEEECCCCSCEEEEEECSSSS----------------CEEEEETTSCEEEEEEETTEE--EEEEEECCCS
T ss_pred ECCCCCCeEEEEEecCcCCCeEEEEECCCCC----------------EEEEEeCCCcEEEEEecCCCE--EEEEEecCCC
Confidence 9987643 333444555555555554332 234566777888887543211 2356788999
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCC---------------eEEEEee--cCCceEEEEEeeCCCCEEEEEeCC
Q 009614 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGID---------------RCLRVFS--HNNYVTSVAFNPVDDNYFISGSID 450 (531)
Q Consensus 389 ~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~---------------~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~D 450 (531)
..|.+++|+|++ +|++++.|++|++||.... +++..+. |...|++++|+| ++.+|++++.|
T Consensus 195 ~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d 273 (345)
T 3fm0_A 195 STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ-LTGALATACGD 273 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECT-TTCCEEEEETT
T ss_pred CceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEec-CCCEEEEEeCC
Confidence 999999999999 9999999999999996321 2344443 888999999999 89999999999
Q ss_pred CeEEEEeCCCCe--------E-E-EecCCCCceEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEEEE
Q 009614 451 GKVRIWEVRRCQ--------V-V-DYTDIREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 451 g~I~Iwd~~~~~--------~-~-~~~~~~~~v~~v~~spdg-~~l~sgs~dg~I~iwd~~~~~l~~~ 507 (531)
+.|++|+..... . . ...+|...|++++|+|++ .+|++|+.||+|+||++.+++...+
T Consensus 274 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 274 DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 999999987542 1 1 235789999999999998 5999999999999999998876544
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=4.2e-30 Score=264.04 Aligned_cols=266 Identities=20% Similarity=0.276 Sum_probs=209.3
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccc------------eEEcccCCCEEEEEEccCCCEEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTG------------QEFLAHEGSILTMKFSLDGQYLA 300 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~------------~~l~~H~~~I~~l~fspdg~~La 300 (531)
.|...+.+++|+|+|++||+|+ ++.++||++..+..... +... .....+...|++++|+|+|++|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVAR-LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEE-ECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEE-ecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 4667888999999999999986 68999999986543211 0000 00012334599999999999999
Q ss_pred EEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcc
Q 009614 301 SGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (531)
Q Consensus 301 sgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (531)
+|+.|++|+|||+.+++....+..+...+.++.|.++.. ..++++.++.+.+|+..... .
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~----------------~l~s~s~d~~v~iwd~~~~~----~ 199 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD----------------KLVSGSGDRTVRIWDLRTGQ----C 199 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSEEEEEETTTTE----E
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC----------------EEEEecCCCcEEEEECCCCe----e
Confidence 999999999999999988877777777777777665432 23456778899999876532 2
Q ss_pred eeEeecCCCCeeEEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEe--------ecCCceEEEEEeeCCCCEEEEEeCC
Q 009614 381 LHEFQGHSSEVLDLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVF--------SHNNYVTSVAFNPVDDNYFISGSID 450 (531)
Q Consensus 381 ~~~~~~h~~~I~~l~~sp-~~-~l~s~s~Dg~V~lwdl~~~~~l~~~--------~h~~~V~sv~fsp~d~~~l~sgs~D 450 (531)
...+ .+...+.+++|+| ++ +|++|+.|++|++||++++..+..+ .|...|++++|+| ++++|++|+.|
T Consensus 200 ~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d 277 (393)
T 1erj_A 200 SLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLD 277 (393)
T ss_dssp EEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred EEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCC
Confidence 3333 3567899999999 66 9999999999999999999888766 3889999999999 99999999999
Q ss_pred CeEEEEeCCCCe-------------EEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeeccccc
Q 009614 451 GKVRIWEVRRCQ-------------VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKK 517 (531)
Q Consensus 451 g~I~Iwd~~~~~-------------~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk 517 (531)
+.|++||+++.. ...+.+|...|.+++|+|++.+|++|+.||.|++||+.+++.+..++
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~-------- 349 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-------- 349 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE--------
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC--------
Confidence 999999997632 23567899999999999999999999999999999999998876543
Q ss_pred CCCceeeeEEEee
Q 009614 518 LPGKRITGFQVVK 530 (531)
Q Consensus 518 ~~~~~It~l~f~p 530 (531)
.|...|++++|+|
T Consensus 350 ~h~~~v~~v~~~~ 362 (393)
T 1erj_A 350 GHRNSVISVAVAN 362 (393)
T ss_dssp CCSSCEEEEEECS
T ss_pred CCCCCEEEEEecC
Confidence 2346788888764
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.98 E-value=1.6e-30 Score=286.90 Aligned_cols=284 Identities=19% Similarity=0.277 Sum_probs=227.8
Q ss_pred cccccceeeeccccceeeeCCC-CeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC
Q 009614 226 KKLGAMARIIDRHGSATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (531)
Q Consensus 226 ~~~~~~~~~~~~~~s~~fspdg-~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~ 304 (531)
+..+.+..|.+.|.+++|+|++ .+|++|+.|+.|+||++....... ......+.+|...|++++|+|++++|++|+.
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~--~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~ 450 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY--GVAQRRLTGHSHFVEDVVLSSDGQFALSGSW 450 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS--CEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc--ccccceecCCCCcEEEEEECCCCCEEEEEeC
Confidence 3445678899999999999875 789999999999999997644321 1233568899999999999999999999999
Q ss_pred CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
||+|+|||+.++.....+..+...+.++.+.++.. ..++++.++.+.+|+...... .......
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~----------------~l~s~s~D~~i~iwd~~~~~~-~~~~~~~ 513 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR----------------QIVSASRDRTIKLWNTLGECK-YTISEGG 513 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS----------------CEEEEETTSCEEEECTTSCEE-EEECSST
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCC----------------EEEEEeCCCEEEEEECCCCcc-eeeccCC
Confidence 99999999999988888888887777777765432 235667788899998643111 0011122
Q ss_pred ecCCCCeeEEEEcCCC---eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC
Q 009614 385 QGHSSEVLDLSWSKNG---FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (531)
Q Consensus 385 ~~h~~~I~~l~~sp~~---~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~ 460 (531)
.+|...|.+++|+|++ .|++++.|++|++||++++++...+. |...|++++|+| ++++|++|+.||.|+|||+.+
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTT
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCC
Confidence 5689999999999986 79999999999999999999888885 999999999999 999999999999999999999
Q ss_pred CeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccc-----------cCCCceeeeEEEe
Q 009614 461 CQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKK-----------KLPGKRITGFQVV 529 (531)
Q Consensus 461 ~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~k-----------k~~~~~It~l~f~ 529 (531)
++.+....+...|.+++|+|++.+|++++ ++.|+|||+.+++++..+........ +.+...+++++|+
T Consensus 593 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 671 (694)
T 3dm0_A 593 GKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWS 671 (694)
T ss_dssp TEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEEC
T ss_pred CceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEc
Confidence 99887666778899999999998887766 56699999999999887765432211 1112247889988
Q ss_pred e
Q 009614 530 K 530 (531)
Q Consensus 530 p 530 (531)
|
T Consensus 672 p 672 (694)
T 3dm0_A 672 A 672 (694)
T ss_dssp T
T ss_pred C
Confidence 6
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.2e-31 Score=263.71 Aligned_cols=248 Identities=20% Similarity=0.214 Sum_probs=185.9
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~ 313 (531)
|...+.+++|+|++.+|++|+.|+.|+||+................+.+|.+.|++++|+|+|++||+|+.|++|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 56778889999999999999999999999986432211122344568899999999999999999999999999999999
Q ss_pred ccC----ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 314 IEH----ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 314 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
... +.+..+..+...+.++.|.++. ...++++.++.+.+|+..... .+++..+.+|.+
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~----------------~~l~s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~ 198 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSE----------------ALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEG 198 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSS----------------SEEEEEETTSCEEEEEEETTE--EEEEEEECCCSS
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCC----------------CEEEEEcCCCeEEEEECCCCC--eeEEEEccCCCC
Confidence 432 2344455555556666655432 123566778888888754321 135778899999
Q ss_pred CeeEEEEcCC--C-eEEEEeCCCcEEEEECCCC--------eEEEEee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEE
Q 009614 390 EVLDLSWSKN--G-FLLSSSADKTVRLWQVGID--------RCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (531)
Q Consensus 390 ~I~~l~~sp~--~-~l~s~s~Dg~V~lwdl~~~--------~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iw 456 (531)
.|.+++|+|+ + +|++++.|++|++||+..+ .+...+. |...|++++|+| + .+|++++.||.|+||
T Consensus 199 ~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~-~~l~s~~~dg~v~iw 276 (330)
T 2hes_X 199 TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-N-GLIASVGADGVLAVY 276 (330)
T ss_dssp CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-T-SCEEEEETTSCEEEE
T ss_pred cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-C-CEEEEEeCCCEEEEE
Confidence 9999999998 5 8999999999999998754 3444443 889999999997 4 489999999999999
Q ss_pred eCCCCe--EE-E-ecCCCC-ceEEEEEcc--CCCEEEEEeCCCcEEEEeCCC
Q 009614 457 EVRRCQ--VV-D-YTDIRE-IVSAVCYCP--DGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 457 d~~~~~--~~-~-~~~~~~-~v~~v~~sp--dg~~l~sgs~dg~I~iwd~~~ 501 (531)
|..+++ .+ . ...|.. .|++++|+| ++++|++|+.||+|+|||+..
T Consensus 277 ~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 277 EEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 998874 33 2 356776 899999999 789999999999999999864
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=1e-30 Score=263.42 Aligned_cols=253 Identities=17% Similarity=0.266 Sum_probs=197.5
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+|...+.+++|+|++.++++|+.|+.|++||+.+.. ....+.+|...|++++|+|++++|++|+.|++|+
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~-------~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT-------TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIK 143 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC-------EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEE
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-------EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEE
Confidence 456778888999999999999999999999999998543 3346889999999999999999999999999999
Q ss_pred EEEcccCccccce--ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecC
Q 009614 310 VWKVIEHERLDGF--DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH 387 (531)
Q Consensus 310 iWd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 387 (531)
+||+......... ..+...+.++.+.+........ .......+.++.++.+.+|+.. ......+.+|
T Consensus 144 ~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~l~s~~~d~~i~iwd~~-----~~~~~~~~~h 212 (343)
T 2xzm_R 144 LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKV------QPFAPYFASVGWDGRLKVWNTN-----FQIRYTFKAH 212 (343)
T ss_dssp EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCC------CSSCCEEEEEETTSEEEEEETT-----TEEEEEEECC
T ss_pred EEeccCCceeeeecccCCCceeeeeeecccccccccc------CCCCCEEEEEcCCCEEEEEcCC-----CceeEEEcCc
Confidence 9999743221111 1334445556655543211000 0011234667888999999843 3456678899
Q ss_pred CCCeeEEEEcCCC-eEEEEeCCCcEEEEEC-CCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-
Q 009614 388 SSEVLDLSWSKNG-FLLSSSADKTVRLWQV-GIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV- 464 (531)
Q Consensus 388 ~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl-~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~- 464 (531)
...|.+++|+|++ +|++|+.|++|++||+ ........+.+...|++++|+| ++.+++++ .|+.|++||+.+++..
T Consensus 213 ~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp-~~~~la~~-~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 213 ESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNP-KLQWVAVG-TDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECS-SSCEEEEE-ESSCEEEEESSSCCSCS
T ss_pred cccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECC-CCCEEEEE-CCCCEEEEEeCCCCCCc
Confidence 9999999999999 9999999999999999 4555666677778899999999 88877655 5788999999876532
Q ss_pred --Eec-----------CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q 009614 465 --DYT-----------DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 465 --~~~-----------~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~ 502 (531)
.+. +|...|++++|+|+|++|++|+.||.|++|++.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 291 VCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred eEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 222 57788999999999999999999999999998754
No 32
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.9e-30 Score=256.28 Aligned_cols=274 Identities=15% Similarity=0.175 Sum_probs=223.9
Q ss_pred ccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
..+.+|...+.+++|+|++++|++|+.||.|+||++.... ....+.+|...|++++|+|++++|++++.||.|
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE-------RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch-------hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 3577888999999999999999999999999999987543 335688999999999999999999999999999
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccc-------cCcce
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL-------LEKPL 381 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 381 (531)
++||+.+++....+. ....+.++.+.+.....+.... . ....++.+.+|+...... ...++
T Consensus 99 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--~---------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 99 KLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILD--N---------VMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEEC--C---------BTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred EEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecC--C---------ccCCCCEEEEEEecCCccceeeccccccee
Confidence 999999998877776 4555666666554432221111 0 112235666666543322 12355
Q ss_pred eEeecCCC--CeeEEEEcCCC-eEEEEeCCCcEEEEECCC-CeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEE
Q 009614 382 HEFQGHSS--EVLDLSWSKNG-FLLSSSADKTVRLWQVGI-DRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (531)
Q Consensus 382 ~~~~~h~~--~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~-~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iw 456 (531)
..+..|.+ .+.+++|+|++ +|++++.|+.|++||+++ .+.+..+. |...|.+++|+| ++++|++++.|+.|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLV 245 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEE
Confidence 66777777 99999999999 999999999999999998 77777776 899999999999 99999999999999999
Q ss_pred eCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCC--------------cEEEEeCCCCeEEEEeeeeecccccCCCce
Q 009614 457 EVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTG--------------NCRFYDIKDNQLYQQNQICLQGKKKLPGKR 522 (531)
Q Consensus 457 d~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg--------------~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~ 522 (531)
|+.+++.+....+...+..++|+|+++++++++.++ .+++||+.+++.+..+. .+...
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--------~~~~~ 317 (369)
T 3zwl_B 246 DVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ--------GHFGP 317 (369)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE--------CCSSC
T ss_pred ECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee--------cccCc
Confidence 999999887666889999999999999999999988 89999999998877553 23468
Q ss_pred eeeEEEee
Q 009614 523 ITGFQVVK 530 (531)
Q Consensus 523 It~l~f~p 530 (531)
|++++|+|
T Consensus 318 v~~~~~s~ 325 (369)
T 3zwl_B 318 LNTVAISP 325 (369)
T ss_dssp EEEEEECT
T ss_pred EEEEEECC
Confidence 89999986
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2e-30 Score=262.64 Aligned_cols=256 Identities=18% Similarity=0.239 Sum_probs=206.4
Q ss_pred cccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC--CCEEEEEeCC
Q 009614 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD--GQYLASGGED 305 (531)
Q Consensus 228 ~~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd--g~~Lasgs~D 305 (531)
...+.+|...+.+++|+|++++||+|+.||.|+||++.... ......+.+|.+.|++++|+++ +++|++|+.|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-----ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 34577888999999999999999999999999999987322 2233468899999999999987 9999999999
Q ss_pred CcEEEEEcccCc--cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 306 GTVRVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 306 g~I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
|.|++||+.+++ ....+..+...+.++.+.+.... ...+.++.++.+.+|+...... .....
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------~~l~~~~~d~~i~v~d~~~~~~--~~~~~ 142 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG--------------PLLLVASSDGKVSVVEFKENGT--TSPII 142 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC--------------SEEEEEETTSEEEEEECCTTSC--CCEEE
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC--------------CEEEEecCCCcEEEEecCCCCc--eeeEE
Confidence 999999999886 55555556666667766655211 1234556778888988765422 23456
Q ss_pred eecCCCCeeEEEEcC-------------CC-eEEEEeCCCcEEEEECCCCe----EEEEee-cCCceEEEEEeeCC---C
Q 009614 384 FQGHSSEVLDLSWSK-------------NG-FLLSSSADKTVRLWQVGIDR----CLRVFS-HNNYVTSVAFNPVD---D 441 (531)
Q Consensus 384 ~~~h~~~I~~l~~sp-------------~~-~l~s~s~Dg~V~lwdl~~~~----~l~~~~-h~~~V~sv~fsp~d---~ 441 (531)
+.+|...|.+++|+| ++ +|++++.|+.|++||++++. ++..+. |...|++++|+| + +
T Consensus 143 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~ 221 (379)
T 3jrp_A 143 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLR 221 (379)
T ss_dssp EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSS
T ss_pred ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCC
Confidence 778999999999999 46 99999999999999998764 333443 899999999999 7 8
Q ss_pred CEEEEEeCCCeEEEEeCCCCe----EE--EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 442 NYFISGSIDGKVRIWEVRRCQ----VV--DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 442 ~~l~sgs~Dg~I~Iwd~~~~~----~~--~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
.+|++++.||.|+|||+.++. .. ....|...|++++|+|+|++|++++.||.|++|++..+...
T Consensus 222 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 222 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 999999999999999999863 22 23447889999999999999999999999999999854433
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.98 E-value=7.6e-30 Score=274.45 Aligned_cols=274 Identities=23% Similarity=0.324 Sum_probs=217.8
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+.+|.+.|.+++|+|||++||+|+.|+.|+|||... ...+.+.+|.+.|++|+|+|+|++||+++.|++|+|
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~--------~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~v 83 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 83 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS--------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC--------CEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 677889999999999999999999999999999532 234578999999999999999999999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccc-------------------------------c-------
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEK-------------------------------I------- 352 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~------- 352 (531)
||+ +++.+..+..+...+.++.|.++....+.+ ..+... +
T Consensus 84 Wd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~-~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 161 (577)
T 2ymu_A 84 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDK 161 (577)
T ss_dssp EET-TSCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEE-cCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccccc
Confidence 996 567777777777777777776654322111 000000 0
Q ss_pred -----------------------------ccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eE
Q 009614 353 -----------------------------DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FL 402 (531)
Q Consensus 353 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l 402 (531)
.....+.++.++.+.+|+. ..+.+..+.+|...|.+++|+|++ +|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-----~~~~~~~~~~~~~~v~~~~~s~dg~~l 236 (577)
T 2ymu_A 162 TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVRGVAFSPDGQTI 236 (577)
T ss_dssp EEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-----TSCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred ceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-----CCcEEEEEecCCCCEEEEEECCCCCEE
Confidence 0011234455666667764 245677889999999999999999 99
Q ss_pred EEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccC
Q 009614 403 LSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPD 481 (531)
Q Consensus 403 ~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spd 481 (531)
++++.|+.|++||.. ++.+..+ .|...|++++|+| ++++|++++.|+.|++||........+.+|...|++++|+|+
T Consensus 237 ~~~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~ 314 (577)
T 2ymu_A 237 ASASDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD 314 (577)
T ss_dssp EEEETTSCEEEECTT-SCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTT
T ss_pred EEEeCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCC
Confidence 999999999999975 4555555 4999999999999 999999999999999999876666678899999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 482 GKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 482 g~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+++|++++.||.|++||+....+.. . ..+...|++++|+|
T Consensus 315 ~~~l~t~~~d~~i~~w~~~~~~~~~-~--------~~~~~~v~~~~~s~ 354 (577)
T 2ymu_A 315 GQTIASASDDKTVKLWNRNGQHLQT-L--------TGHSSSVWGVAFSP 354 (577)
T ss_dssp SSEEEEEETTSCEEEEETTSCEEEE-E--------CCCSSCEEEEEECT
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeEE-E--------eCCCCCEEEEEECC
Confidence 9999999999999999987665432 1 22346788888876
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=5.9e-30 Score=262.96 Aligned_cols=241 Identities=22% Similarity=0.333 Sum_probs=191.1
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
.+.+++|+|+|++|++|+.|+.|+|||+.... ....+.+|...|++++|+|++++|++|+.|++|++||+.++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRK-------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 46689999999999999999999999997543 33468899999999999999999999999999999999998
Q ss_pred ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC---cceeEeecCCCCeeE
Q 009614 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE---KPLHEFQGHSSEVLD 393 (531)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~h~~~I~~ 393 (531)
+....+... ..+.++.+.+... ...+.++.++.+.+|+........ .......+|...|.+
T Consensus 198 ~~~~~~~~~-~~v~~~~~~~~~~---------------~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 198 QCSLTLSIE-DGVTTVAVSPGDG---------------KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp EEEEEEECS-SCEEEEEECSTTC---------------CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred eeEEEEEcC-CCcEEEEEECCCC---------------CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE
Confidence 876555432 2333333333221 223456778888899876533211 111223679999999
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCC------------eEEEEe-ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCC
Q 009614 394 LSWSKNG-FLLSSSADKTVRLWQVGID------------RCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (531)
Q Consensus 394 l~~sp~~-~l~s~s~Dg~V~lwdl~~~------------~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~ 459 (531)
++|+|++ +|++++.|++|++||+++. .+...+ .|...|.+++|+| ++.+|++|+.|+.|++||+.
T Consensus 262 v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 262 VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETT
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECC
Confidence 9999999 9999999999999999753 233344 4999999999999 99999999999999999999
Q ss_pred CCeEE-EecCCCCceEEEEEcc------CCCEEEEEeCCCcEEEEeCCC
Q 009614 460 RCQVV-DYTDIREIVSAVCYCP------DGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 460 ~~~~~-~~~~~~~~v~~v~~sp------dg~~l~sgs~dg~I~iwd~~~ 501 (531)
+++.+ .+.+|...|.+++|+| ++++|++|+.||+|+||++..
T Consensus 341 ~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 341 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 98876 5788999999999986 688999999999999999864
No 36
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.1e-29 Score=251.55 Aligned_cols=244 Identities=19% Similarity=0.261 Sum_probs=198.3
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+..|...+.+++|+|++++|++|+.|+.|++||+.... ....+.+|.+.|++++|+|++++|++|+.||+|++
T Consensus 51 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~l 123 (304)
T 2ynn_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE-------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (304)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred eeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc-------EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEE
Confidence 44456677889999999999999999999999998544 33468899999999999999999999999999999
Q ss_pred EEcccCc-cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 311 WKVIEHE-RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 311 Wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
||+.++. ....+..+...+.++.|.+.... ..++++.++.+.+|+...... ......+|..
T Consensus 124 Wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~---------------~l~sgs~D~~v~iwd~~~~~~---~~~~~~~~~~ 185 (304)
T 2ynn_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPS---------------TFASGCLDRTVKVWSLGQSTP---NFTLTTGQER 185 (304)
T ss_dssp EEGGGTTEEEEEECCCCSCEEEEEECTTCTT---------------EEEEEETTSEEEEEETTCSSC---SEEEECCCTT
T ss_pred EECCCCcchhhhhcccCCcEEEEEECCCCCC---------------EEEEEeCCCeEEEEECCCCCc---cceeccCCcC
Confidence 9998874 33455666666666666553322 235667888999998754321 1223345778
Q ss_pred CeeEEEEcC--CC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE
Q 009614 390 EVLDLSWSK--NG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (531)
Q Consensus 390 ~I~~l~~sp--~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~ 465 (531)
.+..+.|+| ++ +|++++.|++|++||+++++++..+. |...|++++|+| ++.+|++|+.||+|+|||+.+++++.
T Consensus 186 ~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp CEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred cEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceee
Confidence 899999987 45 99999999999999999999999886 999999999999 99999999999999999999998874
Q ss_pred -ecCCCCceEEEEEccCCC--EEEEEeCCCcEEEEeCCC
Q 009614 466 -YTDIREIVSAVCYCPDGK--GGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 466 -~~~~~~~v~~v~~spdg~--~l~sgs~dg~I~iwd~~~ 501 (531)
+..+...+.+++|+|++. ++++|+.| .+.+|++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 265 TLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred eccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 677888999999999885 46777654 577888764
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.9e-29 Score=271.37 Aligned_cols=259 Identities=23% Similarity=0.340 Sum_probs=214.5
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+.+|...+.+++|+|++.++++++.|+.|++|+..... ...+.+|...|++++|+|+|++|++|+.||.|++
T Consensus 299 ~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~--------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~ 370 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH--------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 370 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE--------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe--------eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 45566777789999999999999999999999976432 2357889999999999999999999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
|+. +++.+..+..+...+.++.+.++.. ..+.++.++.+.+|+.. .+.+..+.+|...
T Consensus 371 ~~~-~~~~~~~~~~~~~~v~~~~~s~dg~----------------~l~~~~~d~~v~~~~~~-----~~~~~~~~~~~~~ 428 (577)
T 2ymu_A 371 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQ----------------TIASASDDKTVKLWNRN-----GQLLQTLTGHSSS 428 (577)
T ss_dssp EET-TCCEEEEEECCSSCEEEEEECTTSS----------------CEEEEETTSEEEEECTT-----CCEEEEEECCSSC
T ss_pred EcC-CCCEEEEecCCCCCeEEEEECCCCC----------------EEEEEeCCCEEEEEeCC-----CCEEEEecCCCCC
Confidence 995 5666666766666666666655432 22445667788888743 4567888999999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecC
Q 009614 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD 468 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~ 468 (531)
|++++|+|++ +|++++.|++|++||+.. +.+..+ .|...|++++|+| ++++|++++.|+.|+|||.....+..+.+
T Consensus 429 v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~~~~~~~~~~~ 506 (577)
T 2ymu_A 429 VWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTG 506 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEEEECCSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Confidence 9999999999 999999999999999754 555555 5999999999999 99999999999999999976555557889
Q ss_pred CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 469 IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 469 ~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
|...|++++|+|||++|++++.||.|+|||. +++++..+. .|...|++++|+|
T Consensus 507 h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~--------~h~~~v~~~~fs~ 559 (577)
T 2ymu_A 507 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT--------GHSSSVWGVAFSP 559 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE--------CCSSCEEEEEECT
T ss_pred CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc--------CCCCCEEEEEEcC
Confidence 9999999999999999999999999999996 466555432 3457899999987
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.2e-29 Score=257.46 Aligned_cols=284 Identities=13% Similarity=0.117 Sum_probs=224.8
Q ss_pred cccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC----C---CEEE
Q 009614 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD----G---QYLA 300 (531)
Q Consensus 228 ~~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd----g---~~La 300 (531)
...+..|.+.+.+++|+| .+|++|+.||.|+||++...... ........+.+|...|++++|+|+ + ++|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-CGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-cCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 345667888999999999 89999999999999999865521 123345568899999999999999 9 9999
Q ss_pred EEeCCCcEEEEEcccCcc-----ccceecC-----CCCCeeEEEe----ecCCcceeeeeccccccccccccccCCCceE
Q 009614 301 SGGEDGTVRVWKVIEHER-----LDGFDVQ-----DTDPSCLYFT----INHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (531)
Q Consensus 301 sgs~Dg~I~iWd~~~~~~-----~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (531)
+++.||.|++|++.+++. ...+..+ ...+.++.+. +.... ..+.++.++.+
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------------~l~~~~~dg~i 150 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH---------------RLVATDVKGTT 150 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CE---------------EEEEEETTSCE
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCce---------------EEEEEeCCCcE
Confidence 999999999999998886 6666655 3556666666 33221 02445567788
Q ss_pred EEeCCcc------cccc-CcceeEe-------ecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee----c-
Q 009614 367 VVLPPKV------FRLL-EKPLHEF-------QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS----H- 427 (531)
Q Consensus 367 ~~~~~~~------~~~~-~~~~~~~-------~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~----h- 427 (531)
.+|+... .... -.+...+ ..|...|.+++|+|+++|++++.|+.|++||+++++++..+. |
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~ 230 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMI 230 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEecccccc
Confidence 8887765 2221 1122255 448999999999998888899999999999999999998886 5
Q ss_pred --CCceEEEEEeeCCCCEEEEEeCC---CeEEEEeCCCCeEEE-ecC-------------CCCceEEEEEccCCCEEEEE
Q 009614 428 --NNYVTSVAFNPVDDNYFISGSID---GKVRIWEVRRCQVVD-YTD-------------IREIVSAVCYCPDGKGGIVG 488 (531)
Q Consensus 428 --~~~V~sv~fsp~d~~~l~sgs~D---g~I~Iwd~~~~~~~~-~~~-------------~~~~v~~v~~spdg~~l~sg 488 (531)
...|++++|+| ++.+|++++.| +.|++||+.+++.+. +.. |...|++++|+|++++|+++
T Consensus 231 ~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 231 NNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEE
Confidence 89999999999 89999999999 999999999988764 555 89999999999999999999
Q ss_pred eCCCcEEEEeCCCCeEEEEeeeeecc--c-----------ccCCCceeeeEEEee
Q 009614 489 TMTGNCRFYDIKDNQLYQQNQICLQG--K-----------KKLPGKRITGFQVVK 530 (531)
Q Consensus 489 s~dg~I~iwd~~~~~l~~~~~~~~~~--~-----------kk~~~~~It~l~f~p 530 (531)
+.||.|++||+.+++++..+...... . ...+...|++++|+|
T Consensus 310 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 364 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 364 (397)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc
Confidence 99999999999999988877632110 0 011268899999987
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.2e-29 Score=252.86 Aligned_cols=261 Identities=16% Similarity=0.185 Sum_probs=205.2
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc--CCCEEEEEeCCCcE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--DGQYLASGGEDGTV 308 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--dg~~Lasgs~Dg~I 308 (531)
+.+|.+.+.+++|+|++.+|++|+.||.|+||++...... ......+.+|...|++++|+| ++++|++|+.||.|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN---WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC---EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc---ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 4568888999999999999999999999999999864432 123456789999999999999 69999999999999
Q ss_pred EEEEcccCc---------cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 309 RVWKVIEHE---------RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 309 ~iWd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
++||+.++. ....+..+...+.++.+.+.... ...+.++.++.+.+|+.........
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------~~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG--------------LKLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC--------------SEEEEEETTCEEEEEECSSTTCTTC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC--------------cEEEEecCCCcEEEecCCChHHhcc
Confidence 999998873 34444445555555555544211 2234566788889998765433211
Q ss_pred ce---------eEeecCCCCeeEEEEcCC---C-eEEEEeCCCcEEEEECCCCeE--EEEee-cCCceEEEEEeeCCC--
Q 009614 380 PL---------HEFQGHSSEVLDLSWSKN---G-FLLSSSADKTVRLWQVGIDRC--LRVFS-HNNYVTSVAFNPVDD-- 441 (531)
Q Consensus 380 ~~---------~~~~~h~~~I~~l~~sp~---~-~l~s~s~Dg~V~lwdl~~~~~--l~~~~-h~~~V~sv~fsp~d~-- 441 (531)
.. ....+|...+.+++|+|+ + +|++++.|+.+.+|+...++. +..+. |...|++++|+| ++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~ 228 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGR 228 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSC
T ss_pred ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCC
Confidence 10 112368889999999997 5 999999999999998887765 44443 899999999999 76
Q ss_pred --CEEEEEeCCCeEEEEeCCCC----------------------------------------------eEE-EecCCCCc
Q 009614 442 --NYFISGSIDGKVRIWEVRRC----------------------------------------------QVV-DYTDIREI 472 (531)
Q Consensus 442 --~~l~sgs~Dg~I~Iwd~~~~----------------------------------------------~~~-~~~~~~~~ 472 (531)
++|++|+.||.|++||++.+ +.+ .+.+|...
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE 308 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC
T ss_pred cceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc
Confidence 89999999999999999874 233 46778999
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 473 v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
|++++|+|++++|++|+.||.|+||++.+++....++
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 9999999999999999999999999999987766554
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=3.4e-29 Score=253.36 Aligned_cols=248 Identities=14% Similarity=0.143 Sum_probs=198.9
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd 312 (531)
.|...+.+++|+|+++++++|+.++.|++|++..... .....+.+|...|++++|+|++++|++++.||.|++||
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW-----VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE-----EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE-----EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 3567888999999999999999999999999875431 13356789999999999999999999999999999999
Q ss_pred cccCccccce--ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 313 VIEHERLDGF--DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 313 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
+.+++....+ ..+...+.++.+.++.. ..+.++.++.+.+|+...............+|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~ 144 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEK----------------KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST 144 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSS----------------EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSC
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCC----------------EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCC
Confidence 9887654433 23344455555544321 22344556777777765432111122334678999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEEC------------------CCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCC
Q 009614 391 VLDLSWSKNG-FLLSSSADKTVRLWQV------------------GIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID 450 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~V~lwdl------------------~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~D 450 (531)
|.+++|+|++ +|++++.|+.|++||+ ..++++..+. |...|++++|+| ++++|++++.|
T Consensus 145 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 223 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHD 223 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCC
Confidence 9999999999 9999999999999995 4677888874 899999999999 99999999999
Q ss_pred CeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC--Ce
Q 009614 451 GKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD--NQ 503 (531)
Q Consensus 451 g~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~--~~ 503 (531)
+.|++||+++++.+ .+..|...|++++|+|++.+|++| .||.|++|++.+ ++
T Consensus 224 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~ 278 (372)
T 1k8k_C 224 STVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGK 278 (372)
T ss_dssp TEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTE
T ss_pred CEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCce
Confidence 99999999988776 577888899999999999988887 899999999988 64
No 41
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-29 Score=257.09 Aligned_cols=240 Identities=21% Similarity=0.320 Sum_probs=202.5
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd 312 (531)
.|...+.+++|+|++.+|++|+.+|.|++|+... .....+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG--------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETTS--------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC--------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 3566888999999999999999999999999331 23346788999999999999999999999999999999
Q ss_pred cccCccccceecCCCC---------------CeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccccc
Q 009614 313 VIEHERLDGFDVQDTD---------------PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL 377 (531)
Q Consensus 313 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (531)
+.+++....+..+... +.++.+.++ ...+.++.++.+.+|+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~g~i~~~d~~~---- 236 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-----------------DKFVIPGPKGAIFVYQITE---- 236 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEET-----------------TEEEEECGGGCEEEEETTC----
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-----------------CEEEEEcCCCeEEEEEcCC----
Confidence 9999887777655544 333333322 1235566778888888765
Q ss_pred CcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 378 EKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 378 ~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
.+++..+.+|...|.+++|+|++ +|++++.|+.|++||+.+++.+..+. |...|.+++|+| ++ +|++++.|+.|++
T Consensus 237 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 237 KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVG-DD-KVISCSMDGSVRL 314 (425)
T ss_dssp SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEET-TT-EEEEEETTSEEEE
T ss_pred CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECC-CC-EEEEEeCCCcEEE
Confidence 34567788999999999999999 99999999999999999998888886 899999999999 77 9999999999999
Q ss_pred EeCCCCeEEE-ecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 456 WEVRRCQVVD-YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 456 wd~~~~~~~~-~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
||+.+++.+. +..|...|++++|+|++++|++++.||.|++||+.+++
T Consensus 315 ~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 315 WSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 9999998774 67788999999999999999999999999999998877
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.6e-30 Score=262.88 Aligned_cols=243 Identities=11% Similarity=0.088 Sum_probs=187.4
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~ 313 (531)
+...+.+++|+|++++||+|+.|+.|+||++..... .....+.+|.+.|++++|+|++++|++|+.||+|++||+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-----KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE-----EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce-----EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 346788999999999999999999999999985421 223357789999999999999999999999999999999
Q ss_pred ccCc---cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec-CCC
Q 009614 314 IEHE---RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-HSS 389 (531)
Q Consensus 314 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~ 389 (531)
.++. ....+..+...+.++.+.++.. ..+.++.++.+.+|+....... .....+.+ |..
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~h~~ 147 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNED----------------KFAVGSGARVISVCYFEQENDW-WVSKHLKRPLRS 147 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSS----------------CCEEEESSSCEEECCC-----C-CCCEEECSSCCS
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCC----------------EEEEEecCCeEEEEEECCcccc-eeeeEeecccCC
Confidence 8877 3334444555555555544321 2345667788899987653311 13556667 999
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECC------------------CCeEEEEeecCCceEEEEEeeCCCCEEEEEeCC
Q 009614 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVG------------------IDRCLRVFSHNNYVTSVAFNPVDDNYFISGSID 450 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~------------------~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~D 450 (531)
.|.+++|+|++ +|++++.|++|++||+. .++++..+.|...|++++|+| ++++|++++.|
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d 226 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP-SGNALAYAGHD 226 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT-TSSCEEEEETT
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC-CCCEEEEEeCC
Confidence 99999999999 99999999999999985 355666668999999999999 99999999999
Q ss_pred CeEEEEeCCCCeE----E-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 451 GKVRIWEVRRCQV----V-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 451 g~I~Iwd~~~~~~----~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
|.|+|||+.+++. + .+..|...|++++|+|+|++|++|+.++.+ +|+..
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 227 SSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9999999998865 3 578899999999999999999998866655 77665
No 43
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-30 Score=268.04 Aligned_cols=268 Identities=10% Similarity=0.144 Sum_probs=200.6
Q ss_pred eeeeccccceeeeC-CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 232 ARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 232 ~~~~~~~~s~~fsp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
.+|.+.+.+++|+| ++.+||+|+.||.|+||++....... .......+ +|.+.|++|+|+|++++|++|+.||+|++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~v 137 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE-VYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIV 137 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-CCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-ccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEE
Confidence 44667888999999 99999999999999999987522111 11112222 59999999999999999999999999999
Q ss_pred EEcc---cCccccceecCCCCCeeEEEeec-CCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec
Q 009614 311 WKVI---EHERLDGFDVQDTDPSCLYFTIN-HLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (531)
Q Consensus 311 Wd~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (531)
||+. +++.......+ .+..+.+.+. ....+..+.... .......+.++.++.+.+|+... .+.+..+.+
T Consensus 138 wd~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~iwd~~~----~~~~~~~~~ 210 (437)
T 3gre_A 138 LKVNHYQQESEVKFLNCE--CIRKINLKNFGKNEYAVRMRAFV-NEEKSLLVALTNLSRVIIFDIRT----LERLQIIEN 210 (437)
T ss_dssp EEEEEEEETTEEEEEEEE--EEEEEEGGGGSSCCCEEEEEEEE-CSSCEEEEEEETTSEEEEEETTT----CCEEEEEEC
T ss_pred EEeccccCCceeeccccc--eeEEEEccCcccccCceEEEEEE-cCCCCEEEEEeCCCeEEEEeCCC----CeeeEEEcc
Confidence 9995 55443333221 1111111111 111111111000 00123456778889999999876 345777777
Q ss_pred --CCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--ecCCceEEEEEeeC---CCCEEEEEeCCCeEEEEeC
Q 009614 387 --HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--SHNNYVTSVAFNPV---DDNYFISGSIDGKVRIWEV 458 (531)
Q Consensus 387 --h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~--~h~~~V~sv~fsp~---d~~~l~sgs~Dg~I~Iwd~ 458 (531)
|.+.|++++|+|++ +|++|+.|++|++||+++++++..+ .|...|++++|+|. ++.+|++|+.||.|+|||+
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 89999999999999 9999999999999999999999987 57789999977662 5779999999999999999
Q ss_pred CCCeEEE-ecC--------------------------CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 459 RRCQVVD-YTD--------------------------IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 459 ~~~~~~~-~~~--------------------------~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
.+++.+. +.+ |...|++++|+ ++++|++|+.||.|++||+.+++....+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 9988663 222 55668899999 78999999999999999999988776554
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=242.65 Aligned_cols=258 Identities=21% Similarity=0.281 Sum_probs=210.2
Q ss_pred cccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCc
Q 009614 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT 307 (531)
Q Consensus 228 ~~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~ 307 (531)
...+.+|.+.+.+++| |++.++++|+.||.|++|++.... ....+..|...|.+++|+|++++|++|+.||.
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-------LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-------EEEEEEECSSCEEEEEEETTTTEEEEEETTSC
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-------EEEEeecCCccEEEEEECCCCCEEEEecCCCe
Confidence 3456778889999999 999999999999999999986433 33457789999999999999999999999999
Q ss_pred EEEEEcccCc---cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 308 VRVWKVIEHE---RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 308 I~iWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
|++|++.... ....+..+...+.++.+ . ....+.++.++.+.+|+ ....+..+
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------------~-----~~~l~~~~~d~~i~~~d------~~~~~~~~ 138 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF-------------Q-----DGVVISGSWDKTAKVWK------EGSLVYNL 138 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE-------------E-----TTEEEEEETTSEEEEEE------TTEEEEEE
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe-------------c-----CCEEEEEeCCCCEEEEc------CCcEEEec
Confidence 9999987653 33334444444444333 1 12345667788899997 34567788
Q ss_pred ecCCCCeeEEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC
Q 009614 385 QGHSSEVLDLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (531)
Q Consensus 385 ~~h~~~I~~l~~sp-~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~ 460 (531)
..|...|.++.|.| ++ +|++++.|+.|++|| ..+.+..+. |...|.+++|+| ++. +++++.||.|++||+++
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTT
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCc
Confidence 89999999999998 66 999999999999999 455555554 899999999999 776 99999999999999999
Q ss_pred CeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 461 CQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 461 ~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
++.+ .+..|...|++++|+|++ .|++++.||.|++||+.+++++..+.. +...|++++|+|
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~--------~~~~i~~~~~~~ 276 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL--------PAISIWSVDCMS 276 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC--------SSSCEEEEEECT
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec--------cCceEEEEEEcc
Confidence 8877 477899999999999999 589999999999999999988776542 235788888876
No 45
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.8e-28 Score=256.70 Aligned_cols=276 Identities=18% Similarity=0.280 Sum_probs=222.1
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+|...+.. ++.+++.++++|+.||.|++||+.+.. ....+.+|.+.|++++|+|++ +|++|+.||+|+
T Consensus 116 ~l~~h~~~v~~-~~~~~~~~l~sgs~dg~i~vwd~~~~~-------~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 116 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKK-------FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEECCSSSCEE-EEEEETTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred EEcCCCCCcEE-EEEECCCEEEEEcCCCcEEEEECCCCc-------EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 45566655432 455577899999999999999987543 345688999999999999988 999999999999
Q ss_pred EEEcccCccccceecCCCCCeeEEEeecCCcce-e---------eeecccccc---------------------------
Q 009614 310 VWKVIEHERLDGFDVQDTDPSCLYFTINHLSQL-I---------PIDVDKEKI--------------------------- 352 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~--------------------------- 352 (531)
+||+.+++....+..+...+.++.+.+...... + .++......
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 999999999888888888888888876433222 2 122111110
Q ss_pred ------------ccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCC
Q 009614 353 ------------DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGID 419 (531)
Q Consensus 353 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~ 419 (531)
.....+.++.++.+.+|+... .+++..+.+|...|.+++|+|++ +|++|+.|++|++||++++
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQ----MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCC----CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 012345567788888888765 34577888999999999999998 9999999999999999999
Q ss_pred eEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEe
Q 009614 420 RCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (531)
Q Consensus 420 ~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd 498 (531)
+++..+. |...|++++|++ .+|++++.||.|++||+.++.......+...+..++|+|++++|++|+ ||.|++||
T Consensus 343 ~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEE
T ss_pred cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEE
Confidence 9999886 999999999964 899999999999999999988776666777888899999999999998 99999999
Q ss_pred CCCCeEEEEeeeeecccccCCCceeeeEEEe
Q 009614 499 IKDNQLYQQNQICLQGKKKLPGKRITGFQVV 529 (531)
Q Consensus 499 ~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~ 529 (531)
+.+++++.... ..+...|++++|+
T Consensus 419 ~~~g~~~~~~~-------~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 419 LRSGKLVHANI-------LKDADQIWSVNFK 442 (464)
T ss_dssp TTTCCEEESCT-------TTTCSEEEEEEEE
T ss_pred CCCCcEEehhh-------ccCCCcEEEEEec
Confidence 99999876422 2235788888886
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.3e-28 Score=255.10 Aligned_cols=261 Identities=18% Similarity=0.280 Sum_probs=202.2
Q ss_pred cceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcc
Q 009614 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (531)
Q Consensus 239 ~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~ 318 (531)
+.++|+++ ++||+|. |++|+|||..++... ..-.+.+|...|++|+|+|+|++||+|+.||+|+|||+.+++.
T Consensus 109 ~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~-----~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 109 NLVDWSSG-NVLAVAL-DNSVYLWSASSGDIL-----QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp BCEEECTT-SEEEEEE-TTEEEEEETTTCCEE-----EEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred eeEEECCC-CEEEEEe-CCEEEEEECCCCCEE-----EEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE
Confidence 45889976 4777775 899999999865432 1113457888999999999999999999999999999999999
Q ss_pred ccceecCCCCCeeEEEeec------CCcceeeeecccccc-------------------ccccccccCCCceEEEeCCcc
Q 009614 319 LDGFDVQDTDPSCLYFTIN------HLSQLIPIDVDKEKI-------------------DKTKSLRKSSDLTCVVLPPKV 373 (531)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~ 373 (531)
+..+..+...+.++.+... ....+..+....... .......++.++.+.+|+...
T Consensus 182 ~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 8888877776665544211 011111111110000 112235566778888888776
Q ss_pred ccccCcceeEeecCCCCeeEEEEcCCC--eEEE--EeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEe-
Q 009614 374 FRLLEKPLHEFQGHSSEVLDLSWSKNG--FLLS--SSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS- 448 (531)
Q Consensus 374 ~~~~~~~~~~~~~h~~~I~~l~~sp~~--~l~s--~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs- 448 (531)
.......+.....|...|.+++|+|.+ .+++ |+.|++|++||+.+++++..+.+...+.++.|+| +++.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~-~~~~lv~~sg 340 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSP-HYKELISGHG 340 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEET-TTTEEEEEEC
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecC-CCCeEEEEEe
Confidence 655556677888999999999999987 5554 4579999999999999999999889999999999 888877765
Q ss_pred -CCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEE
Q 009614 449 -IDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 449 -~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~ 507 (531)
.|+.|+|||+.+++++ .+.+|...|++++|+|||++|++|+.||+|+|||+.+.....+
T Consensus 341 ~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 341 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 7899999999999877 5889999999999999999999999999999999987655443
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1e-29 Score=264.66 Aligned_cols=267 Identities=15% Similarity=0.184 Sum_probs=197.9
Q ss_pred cceeeeccccceeeeC-CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc-CCCEEEEEeCCCc
Q 009614 230 AMARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGT 307 (531)
Q Consensus 230 ~~~~~~~~~~s~~fsp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~Lasgs~Dg~ 307 (531)
....|...|.+++|+| ++.+||+|+.||.|+|||+...... ....+.+|.+.|++|+|+| ++++|+||+.||+
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-----~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-----TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-----EEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-----eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 3455677899999999 5678999999999999998754432 1223568999999999998 7899999999999
Q ss_pred EEEEEcccCccccceecCCC--CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 308 VRVWKVIEHERLDGFDVQDT--DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 308 I~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
|++||+.++........+.. .+.++.+.++. ...+.++.++.+.+|+.. .+.+..+.
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~l~~g~~dg~i~~wd~~-----~~~~~~~~ 247 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASS----------------RMVVTGDNVGNVILLNMD-----GKELWNLR 247 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTT----------------TEEEEECSSSBEEEEESS-----SCBCCCSB
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCC----------------CEEEEEeCCCcEeeeccC-----cceeEEEe
Confidence 99999976543222221111 12233333221 223566778889998864 34567788
Q ss_pred cCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEe----ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCC
Q 009614 386 GHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVF----SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (531)
Q Consensus 386 ~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~----~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~ 459 (531)
+|...|.+++|+|++ +|++++.|++|++||+++.+....+ .|...|++++|+| ++.+|++++.||.|+|||+.
T Consensus 248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESS
T ss_pred cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECC
Confidence 999999999999987 7889999999999999887654433 4899999999999 99999999999999999999
Q ss_pred CCeEE-EecCCCC------ceEEEEEccCCCEEEEEeC------------CCcEEEEeCCCCeEEEEeeeeecccccCCC
Q 009614 460 RCQVV-DYTDIRE------IVSAVCYCPDGKGGIVGTM------------TGNCRFYDIKDNQLYQQNQICLQGKKKLPG 520 (531)
Q Consensus 460 ~~~~~-~~~~~~~------~v~~v~~spdg~~l~sgs~------------dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~ 520 (531)
++... .+..|.. .+..++|+|++.++++++. ++.|++||+.+++++.... ..+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~-------~~~~ 399 (435)
T 4e54_B 327 QWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY-------DPES 399 (435)
T ss_dssp SSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC-------CSSC
T ss_pred CCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe-------CCCC
Confidence 87654 3333322 2345678888777777653 3579999999998876542 1233
Q ss_pred ceeeeE-EEee
Q 009614 521 KRITGF-QVVK 530 (531)
Q Consensus 521 ~~It~l-~f~p 530 (531)
..|+++ +|+|
T Consensus 400 ~~v~s~~~fsp 410 (435)
T 4e54_B 400 SGISSLNEFNP 410 (435)
T ss_dssp CCCCCEEEECT
T ss_pred CcEEEEEEECC
Confidence 456665 4665
No 48
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.5e-28 Score=241.44 Aligned_cols=256 Identities=18% Similarity=0.269 Sum_probs=198.7
Q ss_pred cceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcc
Q 009614 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (531)
Q Consensus 239 ~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~ 318 (531)
+.++|++++ +||+| .|++|+|||..++.... ...+.+|...|++|+|+|++++||+|+.||+|++|++.+++.
T Consensus 29 ~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~-----~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQ-----LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp BCEEECTTS-EEEEE-ETTEEEEEETTTCCEEE-----EEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEECCCC-EEEEE-eCCEEEEEECCCCCEEE-----EEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 568999886 77776 58999999998654321 113457888999999999999999999999999999999998
Q ss_pred ccceecCCCCCeeEEEeec------CCcceeeeecccc------------c-------cccccccccCCCceEEEeCCcc
Q 009614 319 LDGFDVQDTDPSCLYFTIN------HLSQLIPIDVDKE------------K-------IDKTKSLRKSSDLTCVVLPPKV 373 (531)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~------------~-------~~~~~~~~~~~~~~~~~~~~~~ 373 (531)
+..+..+.....+...... ....+..+..... . ......++++.++.+.+|+...
T Consensus 102 ~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 8888776655443332111 0000100000000 0 0112345677888999999877
Q ss_pred ccccCcceeEeecCCCCeeEEEEcCCC----eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEe-
Q 009614 374 FRLLEKPLHEFQGHSSEVLDLSWSKNG----FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS- 448 (531)
Q Consensus 374 ~~~~~~~~~~~~~h~~~I~~l~~sp~~----~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs- 448 (531)
.............|.+.|.++.++|.+ .+++++.+++|++||...........+...+..+.|+| ++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~sg 260 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSP-HYKELISGHG 260 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEET-TTTEEEEEEC
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecc-cccceEEEEE
Confidence 666556677778899999999999976 33466788999999999999999888999999999999 777776654
Q ss_pred -CCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q 009614 449 -IDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 449 -~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~ 502 (531)
.|+.|+|||+.+++++ .+.+|...|++++|+|||++|++|+.||+|+|||+.+.
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 7999999999999887 48889999999999999999999999999999999764
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=2e-28 Score=242.73 Aligned_cols=243 Identities=17% Similarity=0.309 Sum_probs=199.6
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+..|...+.+++|+|++++|++|+.|+.|++||+.... ....+.+|...|.+++|+|++++|++|+.||.|++
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~i 133 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 133 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc-------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 34566778889999999999999999999999998543 33468899999999999999999999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSS 389 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~ 389 (531)
||+.+++....+..+...+.++.+.++.. ..+.++.++.+.+|+..... .+..+ ..|..
T Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~ 193 (312)
T 4ery_A 134 WDVKTGKCLKTLPAHSDPVSAVHFNRDGS----------------LIVSSSYDGLCRIWDTASGQ----CLKTLIDDDNP 193 (312)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTTCC----EEEEECCSSCC
T ss_pred EECCCCEEEEEecCCCCcEEEEEEcCCCC----------------EEEEEeCCCcEEEEECCCCc----eeeEEeccCCC
Confidence 99999988877777666666666654332 23455677888899876532 23333 45677
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCce--EEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-
Q 009614 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYV--TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV- 464 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V--~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~- 464 (531)
.+..++|+|++ +|++++.|+.|++||+++++++..+. |...+ ....+++.++.+|++|+.||.|++||+.+++++
T Consensus 194 ~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 273 (312)
T 4ery_A 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 273 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhh
Confidence 89999999999 99999999999999999999988885 54433 334455448899999999999999999999877
Q ss_pred EecCCCCceEEEEEccCCCEEEEEe--CCCcEEEEeCC
Q 009614 465 DYTDIREIVSAVCYCPDGKGGIVGT--MTGNCRFYDIK 500 (531)
Q Consensus 465 ~~~~~~~~v~~v~~spdg~~l~sgs--~dg~I~iwd~~ 500 (531)
.+.+|...|.+++|+|++++|++++ .|+.|++|+..
T Consensus 274 ~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 274 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 4788999999999999999999987 69999999864
No 50
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=7.1e-29 Score=253.16 Aligned_cols=267 Identities=15% Similarity=0.149 Sum_probs=205.7
Q ss_pred ccceeeeccccceeeeCCC-CeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc-CCCEEEEEeCCC
Q 009614 229 GAMARIIDRHGSATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDG 306 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspdg-~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~Lasgs~Dg 306 (531)
..+..|...+.+++|+|++ .+|++|+.||.|+||++....... ...+.+|.+.|.+++|+| ++++|++++.|+
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-----FIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE-----EECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce-----eeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3556777889999999999 999999999999999998544321 112347999999999999 789999999999
Q ss_pred cEEEEEcccCccccceecCC---CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 307 TVRVWKVIEHERLDGFDVQD---TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
.|++||+.+ .....+.... ..+.++.+.++.. ..+.++.++.+.+|+.. .+++..
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~d~~i~i~d~~-----~~~~~~ 199 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ----------------MLATGDSTGRLLLLGLD-----GHEIFK 199 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT----------------EEEEEETTSEEEEEETT-----SCEEEE
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC----------------EEEEECCCCCEEEEECC-----CCEEEE
Confidence 999999985 3333443322 3344555544321 23456778889999873 457888
Q ss_pred eecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCC----CeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEe
Q 009614 384 FQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGI----DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (531)
Q Consensus 384 ~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~----~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd 457 (531)
+.+|...|.+++|+|++ +|++++.|++|++||+++ +.++..+.|...|++++|+|.++.+|++++.|+.|+|||
T Consensus 200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence 99999999999999998 799999999999999998 778888899999999999997789999999999999999
Q ss_pred CCCCeEE-EecC-------CC----------CceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCC
Q 009614 458 VRRCQVV-DYTD-------IR----------EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLP 519 (531)
Q Consensus 458 ~~~~~~~-~~~~-------~~----------~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~ 519 (531)
+++++.. .+.. |. ..+..++|+|+|++ +|+.||.|+|||+.+++++..+... .+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~------~~ 351 (383)
T 3ei3_B 280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDP------NA 351 (383)
T ss_dssp TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBT------TB
T ss_pred CCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCC------CC
Confidence 9886543 2221 22 23445666677666 7778999999999999987765421 12
Q ss_pred CceeeeEEEee
Q 009614 520 GKRITGFQVVK 530 (531)
Q Consensus 520 ~~~It~l~f~p 530 (531)
...+..++|+|
T Consensus 352 ~~~~~~~~~s~ 362 (383)
T 3ei3_B 352 AGIISLNKFSP 362 (383)
T ss_dssp CSCCCEEEECT
T ss_pred CceEEEEEEec
Confidence 34566667775
No 51
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=2.2e-28 Score=244.17 Aligned_cols=247 Identities=16% Similarity=0.296 Sum_probs=199.1
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+|...+.+++|+|++.+|++|+.|+.|++|+...... ......+...+..+.+++++.+|++|+.|+.++
T Consensus 81 ~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 81 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT-------TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-------EEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccce-------eeeecCCCCceeEEEEeecCccceeecCCCeEE
Confidence 4556778888999999999999999999999999885433 234667888999999999999999999999999
Q ss_pred EEEcccCcccc-ceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 310 VWKVIEHERLD-GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 310 iWd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
+||+....... ....+...+.++.+.......+ .+.++.++.+.+|+.... +.+..+.+|.
T Consensus 154 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--------------~~s~~~d~~i~i~d~~~~----~~~~~~~~h~ 215 (340)
T 4aow_A 154 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI--------------IVSCGWDKLVKVWNLANC----KLKTNHIGHT 215 (340)
T ss_dssp EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE--------------EEEEETTSCEEEEETTTT----EEEEEECCCS
T ss_pred EEEeCCCceEEEEeccccCcccceEEccCCCCcE--------------EEEEcCCCEEEEEECCCC----ceeeEecCCC
Confidence 99987654322 2233334444444444333222 234566778888887653 4567788999
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE--
Q 009614 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-- 465 (531)
Q Consensus 389 ~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-- 465 (531)
+.|++++|+|++ +|++|+.|++|++||+++.+++..+.+...|.+++|+| ++. +++++.|+.|+|||++++..+.
T Consensus 216 ~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~-~~~~~~d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 216 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP-NRY-WLCAATGPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECS-SSS-EEEEEETTEEEEEETTTTEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCC-CCc-eeeccCCCEEEEEECCCCeEEEec
Confidence 999999999999 99999999999999999999999999999999999999 665 5566679999999999887653
Q ss_pred --------ecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 466 --------YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 466 --------~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
...|...|++++|+|||++|++|+.||.|+|||+.+|.
T Consensus 294 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 294 KQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 23578899999999999999999999999999999875
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-29 Score=258.26 Aligned_cols=250 Identities=11% Similarity=0.193 Sum_probs=203.4
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC-CCEEEEEeCCCcEEEEE
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWK 312 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~Lasgs~Dg~I~iWd 312 (531)
|...+.+++|+|++.+|++|+.||.|++|++...... ......+.+|...|++++|+|+ +++|++++.||.|++||
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNA---INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSC---CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeeccccccc---ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 4466778999999999999999999999999863211 1133467889999999999998 89999999999999999
Q ss_pred cccCc------cccc---eecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 313 VIEHE------RLDG---FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 313 ~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
+.+++ .... ...+...+.++.+.+.... ..+.++.++.+.+|+.... +.+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---------------~l~~~~~dg~v~iwd~~~~----~~~~~ 203 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAH---------------VFASAGSSNFASIWDLKAK----KEVIH 203 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTT---------------EEEEESSSSCEEEEETTTT----EEEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCc---------------EEEEEcCCCCEEEEECCCC----CcceE
Confidence 98876 2222 2344555666666554222 2345567788899987653 33455
Q ss_pred eecC------CCCeeEEEEcCCC--eEEEEeCCC---cEEEEECCCC-eEEEEee--cCCceEEEEEeeCCCCEEEEEeC
Q 009614 384 FQGH------SSEVLDLSWSKNG--FLLSSSADK---TVRLWQVGID-RCLRVFS--HNNYVTSVAFNPVDDNYFISGSI 449 (531)
Q Consensus 384 ~~~h------~~~I~~l~~sp~~--~l~s~s~Dg---~V~lwdl~~~-~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~ 449 (531)
+..| ...|.+++|+|++ +|++++.|+ .|++||++++ .++..+. |...|++++|+|.++++|++++.
T Consensus 204 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 204 LSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp ECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred EeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 5555 7899999999997 899999998 9999999986 5666665 89999999999977899999999
Q ss_pred CCeEEEEeCCCCeEE-EecCCCCceEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEE
Q 009614 450 DGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 450 Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg-~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
||.|++||+.+++.+ .+..|...|++++|+|++ .+|++++.||.|+|||+.+++..
T Consensus 284 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 284 DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 999999999998877 477889999999999999 89999999999999999887643
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3e-28 Score=250.65 Aligned_cols=264 Identities=21% Similarity=0.277 Sum_probs=214.2
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEc-ccCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL-AHEGSILTMKFSLDGQYLASGGEDGTVRVW 311 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~-~H~~~I~~l~fspdg~~Lasgs~Dg~I~iW 311 (531)
.+.+.+...++++++..+++++.|+.|++|+...+... ..+. .|...|++++|+|++++|++|+.||.|++|
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~-------~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVS-------ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEE-------EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEe-------EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 34444444455555677889999999999999865432 1233 388999999999999999999999999999
Q ss_pred EcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCe
Q 009614 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (531)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I 391 (531)
|+.+++.+..+..+...+.++.+.. ...+.++.++.+.+|+.... ...+..+.+|.+.|
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~~~------------------~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v 220 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSWNR------------------HVLSSGSRSGAIHHHDVRIA---NHQIGTLQGHSSEV 220 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEEET------------------TEEEEEETTSEEEEEETTSS---SCEEEEEECCSSCE
T ss_pred ECcCCeEEEEecCCCCceEEEEECC------------------CEEEEEcCCCCEEEEecccC---cceeeEEcCCCCCe
Confidence 9999988887776666666655511 13356677888999987642 34577888999999
Q ss_pred eEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEe--CCCeEEEEeCCCCeEEEec
Q 009614 392 LDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGS--IDGKVRIWEVRRCQVVDYT 467 (531)
Q Consensus 392 ~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs--~Dg~I~Iwd~~~~~~~~~~ 467 (531)
.+++|+|++ +|++++.|+.|++||+++++++..+. |...|.+++|+|....++++|+ .|+.|++||+.+++.+...
T Consensus 221 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~ 300 (401)
T 4aez_A 221 CGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV 300 (401)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 999999998 99999999999999999999888875 9999999999995556777765 7999999999999988777
Q ss_pred CCCCceEEEEEccCCCEEEEE--eCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 468 DIREIVSAVCYCPDGKGGIVG--TMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~~l~sg--s~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.+...|++++|+|++++|+++ +.||.|++||+.+++......+. .+...|++++|+|
T Consensus 301 ~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~------~h~~~v~~~~~s~ 359 (401)
T 4aez_A 301 DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP------AHDTRVLYSALSP 359 (401)
T ss_dssp ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE------CCSSCCCEEEECT
T ss_pred eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec------CCCCCEEEEEECC
Confidence 788899999999999999995 48999999999998776654432 3446889999886
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=253.25 Aligned_cols=267 Identities=10% Similarity=0.177 Sum_probs=214.0
Q ss_pred ccccceeeeCCCC-eEEee----------ecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC
Q 009614 236 DRHGSATLKPGDH-ELTLG----------QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (531)
Q Consensus 236 ~~~~s~~fspdg~-~lasg----------s~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~ 304 (531)
..+.+++|+|++. ++++| +.|+.|+||++....... .. ....|...|++++|+|++++|++|+.
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~----~~-~~~~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK----PI-ASLQVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS----CS-CCCCCSSCEEEEEECSSSSCEEEEES
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc----EE-EEEecCCceEEEEECCCCCeEEEEcc
Confidence 5677899999997 89999 889999999998654320 11 12358899999999999999999999
Q ss_pred CCcEEEEEccc----CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccccc---
Q 009614 305 DGTVRVWKVIE----HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL--- 377 (531)
Q Consensus 305 Dg~I~iWd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 377 (531)
||.|++|++.+ .+....+..+...+.++.+.+..... .+.++.++.+.+|+.......
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~---------------l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNV---------------LASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTB---------------EEEECSSSCEEBCBTTTTSSCTTT
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCE---------------EEEEcCCCeEEEEECCCCcccccc
Confidence 99999999987 34566666677777777776653222 245566788888887654310
Q ss_pred --CcceeEeecCCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEee-c------CCceEEEEEeeCCCCEEEE
Q 009614 378 --EKPLHEFQGHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-H------NNYVTSVAFNPVDDNYFIS 446 (531)
Q Consensus 378 --~~~~~~~~~h~~~I~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h------~~~V~sv~fsp~d~~~l~s 446 (531)
...+..+.+|...|.+++|+|+ + +|++++.|+.|++||+++++++..+. + ...|++++|+|....+|++
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 1112334679999999999998 4 99999999999999999999988886 3 7889999999933479999
Q ss_pred EeCCC---eEEEEeCCCC-eEE-Eec-CCCCceEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCC
Q 009614 447 GSIDG---KVRIWEVRRC-QVV-DYT-DIREIVSAVCYCP-DGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLP 519 (531)
Q Consensus 447 gs~Dg---~I~Iwd~~~~-~~~-~~~-~~~~~v~~v~~sp-dg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~ 519 (531)
++.|+ .|++||++++ .++ .+. .|...|++++|+| ++++|++++.||.|++||+.+++++..+. .+
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~--------~~ 304 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP--------AR 304 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE--------CS
T ss_pred EECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec--------CC
Confidence 99999 9999999986 444 355 7899999999999 99999999999999999999998876654 23
Q ss_pred CceeeeEEEee
Q 009614 520 GKRITGFQVVK 530 (531)
Q Consensus 520 ~~~It~l~f~p 530 (531)
...|++++|+|
T Consensus 305 ~~~v~~~~~s~ 315 (416)
T 2pm9_A 305 GNWCFKTKFAP 315 (416)
T ss_dssp SSCCCCEEECT
T ss_pred CCceEEEEECC
Confidence 46788888886
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.3e-28 Score=271.64 Aligned_cols=244 Identities=19% Similarity=0.320 Sum_probs=197.1
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+|...+.+++|+|++++|++|+.||.|+|||+.... ..+.+.+|...|++++|+|++++|++|+.|++|+
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV-------STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 497 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc-------ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 456677888899999999999999999999999997543 3346889999999999999999999999999999
Q ss_pred EEEcccCccccce---ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec
Q 009614 310 VWKVIEHERLDGF---DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (531)
Q Consensus 310 iWd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (531)
+||+......... ..+...+.++.+.++... ...++++.++.+.+|+.... +....+.+
T Consensus 498 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--------------~~l~s~s~d~~v~vwd~~~~----~~~~~~~~ 559 (694)
T 3dm0_A 498 LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ--------------PTIVSASWDKTVKVWNLSNC----KLRSTLAG 559 (694)
T ss_dssp EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS--------------CEEEEEETTSCEEEEETTTC----CEEEEECC
T ss_pred EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc--------------ceEEEEeCCCeEEEEECCCC----cEEEEEcC
Confidence 9998654322111 223334555555544321 12356778889999987653 44677889
Q ss_pred CCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE
Q 009614 387 HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (531)
Q Consensus 387 h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~ 465 (531)
|.+.|++++|+|++ +|++|+.|++|++||+.+++++..+.+...|.+++|+| ++.++++++ ++.|+|||+.+++++.
T Consensus 560 h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 560 HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSP-NRYWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcC-CCcEEEEEc-CCCEEEEECCCCCChh
Confidence 99999999999999 99999999999999999999999988888999999999 888777765 5679999999988764
Q ss_pred -ecCC-------------------CCceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 466 -YTDI-------------------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 466 -~~~~-------------------~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
+..+ ...+++++|+|||++|++|+.||.|+||++.
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 638 DLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred hhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 2111 1137899999999999999999999999985
No 56
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.9e-28 Score=274.44 Aligned_cols=268 Identities=18% Similarity=0.223 Sum_probs=226.7
Q ss_pred ccceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
..+..|.+.+.+++|+|+++++|+|+.+|.|+||++..+. ..+.+.+|.++|++++|+|++++|++|+.||.|
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc-------eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 3567788999999999999999999999999999987543 334678999999999999999999999999999
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
++||+.+++.+..+..+...+.++.|.++... .+.++.++.+.+|+.... ......+.+|.
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~----------------l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~ 140 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY----------------VLSGSDDLTVKLWNWENN---WALEQTFEGHE 140 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSE----------------EEEEETTSEEEEEEGGGT---SEEEEEEECCS
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCE----------------EEEEcCCCEEEEEECCCC---ceEEEEEcCCC
Confidence 99999999988888877777777777665432 234566788888876542 23466788999
Q ss_pred CCeeEEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCceEEEEEeeC-CCCEEEEEeCCCeEEEEeCCCCeE
Q 009614 389 SEVLDLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPV-DDNYFISGSIDGKVRIWEVRRCQV 463 (531)
Q Consensus 389 ~~I~~l~~sp-~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~-d~~~l~sgs~Dg~I~Iwd~~~~~~ 463 (531)
..|.+++|+| ++ .|++++.|++|++||+.++.....+. +...+.+++|+|. ++.+|++++.||.|++||+.+++.
T Consensus 141 ~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 9999999999 66 99999999999999999888777664 4588999999983 578999999999999999999987
Q ss_pred EE-ecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 464 VD-YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 464 ~~-~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+. +..|...|++++|+|++++|++++.||.|++||+.+++.+..+.. +...|+.++|+|
T Consensus 221 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--------~~~~v~~~~~~~ 280 (814)
T 3mkq_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV--------GLERSWCIATHP 280 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC--------SSSSEEEEEECT
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec--------CCCcEEEEEEcc
Confidence 74 677899999999999999999999999999999999888775542 235677777765
No 57
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=3.2e-28 Score=248.91 Aligned_cols=260 Identities=18% Similarity=0.216 Sum_probs=200.3
Q ss_pred cceeeeccccceeeeC-CCCeEEeeecCCeEEEEeCCCCccccccccc------ceEEcccCCCEEEEEEcc-CCCEEEE
Q 009614 230 AMARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYT------GQEFLAHEGSILTMKFSL-DGQYLAS 301 (531)
Q Consensus 230 ~~~~~~~~~~s~~fsp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~------~~~l~~H~~~I~~l~fsp-dg~~Las 301 (531)
.+..|.+.+.+++|+| ++++|++|+.||.|++|++............ .....+|...|.+++|+| ++++|++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 3556788899999999 9999999999999999999866543221000 001136999999999999 7889999
Q ss_pred EeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcce
Q 009614 302 GGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL 381 (531)
Q Consensus 302 gs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (531)
++.||.|++||+.+++....+.. ...+.++.+.+... .....+.++.++.+.+|+... .+.+
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~v~~~d~~~----~~~~ 179 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVFNF-EETVYSHHMSPVST-------------KHCLVAVGTRGPKVQLCDLKS----GSCS 179 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSSCS-------------SCCEEEEEESSSSEEEEESSS----SCCC
T ss_pred EeCCCeEEEeeCCCCccceeccC-CCceeeeEeecCCC-------------CCcEEEEEcCCCeEEEEeCCC----ccee
Confidence 99999999999999887666652 33333444433221 112335566778888888765 3456
Q ss_pred eEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCe-EEEEe----------------ecCCceEEEEEeeCCCC
Q 009614 382 HEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDR-CLRVF----------------SHNNYVTSVAFNPVDDN 442 (531)
Q Consensus 382 ~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~-~l~~~----------------~h~~~V~sv~fsp~d~~ 442 (531)
..+.+|...|.+++|+|++ +|++++.|+.|++||++++. ++..+ .|...|++++|+| +++
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 258 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGL 258 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSS
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCC
Confidence 7888999999999999998 58999999999999998765 33433 3888999999999 999
Q ss_pred EEEEEeCCCeEEEEeCCCCe-----------------------------------------------EE-EecCCCCceE
Q 009614 443 YFISGSIDGKVRIWEVRRCQ-----------------------------------------------VV-DYTDIREIVS 474 (531)
Q Consensus 443 ~l~sgs~Dg~I~Iwd~~~~~-----------------------------------------------~~-~~~~~~~~v~ 474 (531)
+|++++.||.|++||+.+++ .+ .+.+|...|+
T Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~ 338 (408)
T 4a11_B 259 HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVD 338 (408)
T ss_dssp EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEE
Confidence 99999999999999987643 22 3466889999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 009614 475 AVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 475 ~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~ 508 (531)
+++|+|++++|++|+.||.|++||+.+++.+...
T Consensus 339 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 339 CCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 9999999999999999999999999998877544
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=6.7e-29 Score=258.02 Aligned_cols=267 Identities=14% Similarity=0.230 Sum_probs=190.8
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcc----cccccccceEEcccC------------CCEEEEEEccCC-
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSR----ELSSLYTGQEFLAHE------------GSILTMKFSLDG- 296 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~----~~~~~~~~~~l~~H~------------~~I~~l~fspdg- 296 (531)
+.+.|.+++|+|+|.+||+|+.||.|+||++..... ..........+.+|. +.|++++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 346788899999999999999999999999986542 111222345788998 889999999998
Q ss_pred -CEEEEEeCCCcEEEEEcccCccccceecCCC--------------CCe-------------eEEEeecCCcceeeeecc
Q 009614 297 -QYLASGGEDGTVRVWKVIEHERLDGFDVQDT--------------DPS-------------CLYFTINHLSQLIPIDVD 348 (531)
Q Consensus 297 -~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~--------------~~~-------------~~~~~~~~~~~~~~~~~~ 348 (531)
.+|++++.||+|++|++.++........... ... ...+...+...+..+.+.
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 7999999999999999987543211000000 000 001112233333333333
Q ss_pred ccccccccccccCCCceEEEeCCccccccCc----ceeEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeE-
Q 009614 349 KEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK----PLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRC- 421 (531)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~- 421 (531)
.. ....+.+ .++.+.+|+......... ....+.+|...|.+++|+|++ +|++|+.|++|++||+++++.
T Consensus 187 ~~---~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 187 SD---YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp TT---SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred CC---CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 21 1122344 688999998863211100 011366899999999999986 899999999999999999886
Q ss_pred ---EEEee-cCC------------ceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC-CeEEE-ecCCCCc-----------
Q 009614 422 ---LRVFS-HNN------------YVTSVAFNPVDDNYFISGSIDGKVRIWEVRR-CQVVD-YTDIREI----------- 472 (531)
Q Consensus 422 ---l~~~~-h~~------------~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~-~~~~~-~~~~~~~----------- 472 (531)
+..+. |.. .|++++|+| ++++|++++. +.|+|||+++ ++++. +..|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 66665 444 899999999 9999999999 9999999997 66553 4444321
Q ss_pred ----eEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 473 ----VSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 473 ----v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
+..++|+|++++|++|+.||.|+|||+.+++.+.
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 3349999999999999999999999999988763
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=6e-28 Score=240.30 Aligned_cols=240 Identities=17% Similarity=0.229 Sum_probs=203.6
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~ 313 (531)
+...+.+++|+|+++++++|+.+|.|++|++...... ....+.+|...|++++|+|++++|++++.||.|++||+
T Consensus 96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR-----IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-----EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc-----eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 4456778999999999999999999999999865421 23457789999999999999999999999999999999
Q ss_pred ccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeE
Q 009614 314 IEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (531)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~ 393 (531)
.+++....+..+...+.++.+.++.. ..+.++.++.+.+|+..... .+..+ .|...+.+
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~----------------~l~~~~~dg~i~~~d~~~~~----~~~~~-~~~~~v~~ 229 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGT----------------KLWTGGLDNTVRSWDLREGR----QLQQH-DFTSQIFS 229 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSEEEEEETTTTE----EEEEE-ECSSCEEE
T ss_pred CCCceeeeeecccCceEEEEECCCCC----------------EEEEEecCCcEEEEECCCCc----eEeee-cCCCceEE
Confidence 99988877777666666666655432 22345567788888876543 23333 47889999
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCc
Q 009614 394 LSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREI 472 (531)
Q Consensus 394 l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~ 472 (531)
++|+|++ +|++++.|+.|++||+.+++......|...|++++|+| ++++|++++.||.|++||+.+++.+....|...
T Consensus 230 ~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 308 (337)
T 1gxr_A 230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS 308 (337)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECCCCeEEEEecCCCc
Confidence 9999999 99999999999999999998877777999999999999 999999999999999999999998877788999
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 473 v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
|++++|+|++++|++++.||.|++|++.
T Consensus 309 v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 309 VLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9999999999999999999999999963
No 60
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.9e-28 Score=246.17 Aligned_cols=281 Identities=13% Similarity=0.163 Sum_probs=212.1
Q ss_pred ceeeeccccceeeeCCCCeE-Eeeec---CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC---CCEEEEEe
Q 009614 231 MARIIDRHGSATLKPGDHEL-TLGQR---MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD---GQYLASGG 303 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~l-asgs~---dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd---g~~Lasgs 303 (531)
...|...+.+++|+|++..+ ++|+. ||.|+||++....... ....+|...|++++|+|+ +++|++|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL------LREIEKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE------EEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc------eeeecccCcEEEEEEcCCCCCCceEEEec
Confidence 34577788899999999655 56665 9999999998654321 123379999999999998 69999999
Q ss_pred CCCcEEEEEcccCc-cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCccee
Q 009614 304 EDGTVRVWKVIEHE-RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (531)
Q Consensus 304 ~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (531)
.||.|++||+.+++ ....+..+...+.++.+.+.- + +. ......+.++.++.+.+|+..... .++.
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~--~s---~~~~~l~~~~~d~~i~vwd~~~~~---~~~~ 154 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGL-----G--IG---EGAPEIVTGSRDGTVKVWDPRQKD---DPVA 154 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGG-----G--CC----CCCEEEEEETTSCEEEECTTSCS---SCSE
T ss_pred CCCeEEEEeCCCCCccEEEEEecccceEEEeecccc-----c--cC---CCccEEEEEeCCCeEEEEeCCCCC---Ccce
Confidence 99999999999887 667777676666666554210 0 00 011233566778889999887543 2455
Q ss_pred EeecCCC----CeeEEE----EcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeC--CCCEEEEEeCCC
Q 009614 383 EFQGHSS----EVLDLS----WSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPV--DDNYFISGSIDG 451 (531)
Q Consensus 383 ~~~~h~~----~I~~l~----~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~--d~~~l~sgs~Dg 451 (531)
.+..|.+ .|.+++ |+|++ +|++++.|+.|++||+++++......|...|++++|+|. ++.+|++++.||
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 6655554 899998 67888 999999999999999999999888889999999999995 678999999999
Q ss_pred eEEEEeCCCCeEE------EecCCCCceEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEEEEee-----------eeec
Q 009614 452 KVRIWEVRRCQVV------DYTDIREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKDNQLYQQNQ-----------ICLQ 513 (531)
Q Consensus 452 ~I~Iwd~~~~~~~------~~~~~~~~v~~v~~spdg~-~l~sgs~dg~I~iwd~~~~~l~~~~~-----------~~~~ 513 (531)
.|++||+++++.. ....|...|++++|+|+++ +|++|+.||.|++||+..+....... ....
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL 314 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence 9999999876533 2348999999999999998 89999999999999998754332100 0001
Q ss_pred ccccCCCceeeeEEEee
Q 009614 514 GKKKLPGKRITGFQVVK 530 (531)
Q Consensus 514 ~~kk~~~~~It~l~f~p 530 (531)
.....+...|++++|+|
T Consensus 315 ~~~~~~~~~v~~~~~s~ 331 (357)
T 3i2n_A 315 QNVTLSTQPISSLDWSP 331 (357)
T ss_dssp EEEECCSSCEEEEEECS
T ss_pred eccccCCCCeeEEEEcC
Confidence 11234567899999987
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-28 Score=250.25 Aligned_cols=266 Identities=15% Similarity=0.275 Sum_probs=208.1
Q ss_pred eeccccceeeeCCCC-eEEeeecCCeEEEEeC----CCCcc-----cccc----cccceEEcccCCCEEEEEEccCCCEE
Q 009614 234 IIDRHGSATLKPGDH-ELTLGQRMRRVRVHPV----KKQSR-----ELSS----LYTGQEFLAHEGSILTMKFSLDGQYL 299 (531)
Q Consensus 234 ~~~~~~s~~fspdg~-~lasgs~dg~I~vwd~----~~~~~-----~~~~----~~~~~~l~~H~~~I~~l~fspdg~~L 299 (531)
|.+.+.+++|+|++. +||+|+.||.|++|++ ..... .... +.......+|.+.|++++|+|++++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 347888999999999 9999999999999999 65442 0000 00001122378899999999999999
Q ss_pred EEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 300 ASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 300 asgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
++|+.||.|++|+ .+++....+..+...+.++.+.++.. ..+.++.++.+.+|+.... +
T Consensus 124 ~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~d~~i~iwd~~~~----~ 182 (425)
T 1r5m_A 124 VTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGT----------------HIISMDVENVTILWNVISG----T 182 (425)
T ss_dssp EEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSS----------------EEEEEETTCCEEEEETTTT----E
T ss_pred EEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCC----------------EEEEEecCCeEEEEECCCC----c
Confidence 9999999999999 56777777777777777776655432 1234456777888887553 3
Q ss_pred ceeEeecCCCC---------------eeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCE
Q 009614 380 PLHEFQGHSSE---------------VLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNY 443 (531)
Q Consensus 380 ~~~~~~~h~~~---------------I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~ 443 (531)
.+..+..|... +.+++|+|++.+++++.|+.|++||+.+++.+..+. |...|++++|+| ++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 261 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNKL 261 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTTE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCCE
Confidence 45556666665 999999999999999999999999999998888775 899999999999 9999
Q ss_pred EEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCce
Q 009614 444 FISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKR 522 (531)
Q Consensus 444 l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~ 522 (531)
|++++.|+.|++||+.+++.+ .+..|...|.+++|+|++ +|++++.||.|++||+.+++++..+. .+...
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~~ 332 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI--------VDGVP 332 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE--------CTTCC
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc--------cCCcc
Confidence 999999999999999987765 466789999999999999 99999999999999999998776544 23467
Q ss_pred eeeEEEee
Q 009614 523 ITGFQVVK 530 (531)
Q Consensus 523 It~l~f~p 530 (531)
|++++|+|
T Consensus 333 i~~~~~s~ 340 (425)
T 1r5m_A 333 IFAGRISQ 340 (425)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 88888876
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=2.9e-28 Score=249.11 Aligned_cols=250 Identities=14% Similarity=0.189 Sum_probs=202.0
Q ss_pred cceeeeccccceeeeCC----C---CeEEeeecCCeEEEEeCCCCcccccccccceEEccc-----CCCEEEEEEc----
Q 009614 230 AMARIIDRHGSATLKPG----D---HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAH-----EGSILTMKFS---- 293 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspd----g---~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H-----~~~I~~l~fs---- 293 (531)
.+..|...+.+++|+|+ + .+|++|+.||.|++|++...... .......+.+| ...|++++|+
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET--KKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT--CCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred EEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccc--ccccceeecccccccCCCcEEEEEEeeccC
Confidence 34456677888999999 9 99999999999999998865431 11113457778 5999999999
Q ss_pred cCCCE-EEEEeCCCcEEEEEccc------Ccccc-----cee-------cCCCCCeeEEEeecCCcceeeeecccccccc
Q 009614 294 LDGQY-LASGGEDGTVRVWKVIE------HERLD-----GFD-------VQDTDPSCLYFTINHLSQLIPIDVDKEKIDK 354 (531)
Q Consensus 294 pdg~~-Lasgs~Dg~I~iWd~~~------~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (531)
|++++ |++++.||.|++||+.+ ++.+. .+. .+...+.++.+.+..
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------------- 198 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG---------------- 198 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS----------------
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc----------------
Confidence 99999 99999999999999988 66555 442 244445555554433
Q ss_pred ccccccCCCceEEEeCCccccccCcceeEeec---C---CCCeeEEEEcCCC-eEEEEeCC---CcEEEEECCCCeEEEE
Q 009614 355 TKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG---H---SSEVLDLSWSKNG-FLLSSSAD---KTVRLWQVGIDRCLRV 424 (531)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h---~~~I~~l~~sp~~-~l~s~s~D---g~V~lwdl~~~~~l~~ 424 (531)
..+.++.++.+.+|+... .+++..+.. | ...|.+++|+|++ +|++++.| +.|++||+++++++..
T Consensus 199 -~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~ 273 (397)
T 1sq9_A 199 -LIATGFNNGTVQISELST----LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS 273 (397)
T ss_dssp -EEEEECTTSEEEEEETTT----TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred -eEEEEeCCCcEEEEECCC----CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccce
Confidence 234566778899998865 345677788 8 9999999999999 99999999 9999999999998888
Q ss_pred ee--------------cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-ec------CC--------------
Q 009614 425 FS--------------HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YT------DI-------------- 469 (531)
Q Consensus 425 ~~--------------h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~------~~-------------- 469 (531)
+. |...|++++|+| ++++|++++.||.|+|||+.+++.+. +. .|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 352 (397)
T 1sq9_A 274 LSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSL 352 (397)
T ss_dssp ECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBC
T ss_pred eccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccc
Confidence 85 889999999999 99999999999999999999998774 55 56
Q ss_pred -CCceEEEEEccCC----------CEEEEEeCCCcEEEEeCCCCe
Q 009614 470 -REIVSAVCYCPDG----------KGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 470 -~~~v~~v~~spdg----------~~l~sgs~dg~I~iwd~~~~~ 503 (531)
...|++++|+|+| ++|++++.||.|++|++.+++
T Consensus 353 ~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 353 AEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp SSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 8999999999998 799999999999999998764
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=1.9e-28 Score=252.64 Aligned_cols=262 Identities=15% Similarity=0.149 Sum_probs=202.9
Q ss_pred ceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccc
Q 009614 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL 319 (531)
Q Consensus 240 s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~ 319 (531)
...|+|++.+|++|+.||.|++|++.... ..+.+.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+
T Consensus 102 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 102 VDTAKLQMRRFILGTTEGDIKVLDSNFNL-------QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp EEEECSSSCEEEEEETTSCEEEECTTSCE-------EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC
T ss_pred EEEEecCCCEEEEEECCCCEEEEeCCCcc-------eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc
Confidence 35789999999999999999999987433 22345789999999999999999999999999999999999988
Q ss_pred cceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec-------------
Q 009614 320 DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG------------- 386 (531)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 386 (531)
..+..+...+.++.+.++.. ..+.++.++.+.+|+..... .+..+..
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~----------------~l~s~~~d~~v~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGR----------------NVLSASLDGTIRLWECGTGT----TIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EEEECCSSCEEEEEEETTTT----------------EEEEEETTSCEEEEETTTTE----EEEEECBTTBTTCCEEEEEE
T ss_pred eEEcCCCCcEEEEEEcCCCC----------------EEEEEcCCCcEEEeECCCCc----eeEEeecCCCCCCCccEEEE
Confidence 88887877777777766432 22345667778888765432 2333332
Q ss_pred -----------CCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCC-EEEEEeCCC
Q 009614 387 -----------HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDN-YFISGSIDG 451 (531)
Q Consensus 387 -----------h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~-~l~sgs~Dg 451 (531)
|...+.+++|+|++ +|++++.|+.|++||+++++.+..+. |...|++++|+| ++. +|++|+.||
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg 313 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDG-NNANYIYAGYENG 313 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECS-SCTTEEEEEETTS
T ss_pred ecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeC-CCCCEEEEEeCCC
Confidence 34566667778999 99999999999999999998887774 788999999999 777 999999999
Q ss_pred eEEEEeCCCCeE--EEecC-CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee-eeecccccCCCceeeeEE
Q 009614 452 KVRIWEVRRCQV--VDYTD-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ-ICLQGKKKLPGKRITGFQ 527 (531)
Q Consensus 452 ~I~Iwd~~~~~~--~~~~~-~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~-~~~~~~kk~~~~~It~l~ 527 (531)
.|++||+++++. ..+.. +...|+++. .|++++|++++.||.|++|++.......... .........+...|+.++
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 392 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFC 392 (420)
T ss_dssp EEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEE
T ss_pred eEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEE
Confidence 999999998643 34444 666777774 5688899999999999999998743221111 011111234567889999
Q ss_pred Eee
Q 009614 528 VVK 530 (531)
Q Consensus 528 f~p 530 (531)
|+|
T Consensus 393 ~s~ 395 (420)
T 3vl1_A 393 YVS 395 (420)
T ss_dssp EEC
T ss_pred Ecc
Confidence 987
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=2.1e-28 Score=252.37 Aligned_cols=258 Identities=16% Similarity=0.158 Sum_probs=205.9
Q ss_pred ccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEccc
Q 009614 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~ 315 (531)
+...+++|+|+++++++|+.|+.|++|+........ .+..| ..+....|++++++|++|+.||.|++||+.+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 128 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK-------MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF 128 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTT-------TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceee-------EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC
Confidence 334568999999999999999999999988654321 23344 4455557899999999999999999999998
Q ss_pred CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEE
Q 009614 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (531)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~ 395 (531)
++....+..+...+.++.|.++.. ..+.++.++.+.+|+... .+.+..+.+|...|.+++
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~~~~----------------~l~s~s~d~~i~iwd~~~----~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFPSGE----------------ALISSSQDMQLKIWSVKD----GSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECTTSS----------------EEEEEETTSEEEEEETTT----CCCCEEEECCSSCEEEEE
T ss_pred cceeeecccccCccEEEEECCCCC----------------EEEEEeCCCeEEEEeCCC----CcCceEEcCCCCcEEEEE
Confidence 887777677777777777765432 234566788899998765 345678899999999999
Q ss_pred EcCCC-eEEEEeCCCcEEEEECCCCeEEEEee----cCCceEEEEE---------------------eeCCCCEEEEEeC
Q 009614 396 WSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS----HNNYVTSVAF---------------------NPVDDNYFISGSI 449 (531)
Q Consensus 396 ~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~----h~~~V~sv~f---------------------sp~d~~~l~sgs~ 449 (531)
|+|++ +|++++.|++|++||+++++++..+. +...|.+++| +| ++++|++|+.
T Consensus 189 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~ 267 (420)
T 3vl1_A 189 IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHV 267 (420)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEET
T ss_pred EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcC
Confidence 99999 99999999999999999999998885 4555666555 67 7889999999
Q ss_pred CCeEEEEeCCCCeEEE--ecCCCCceEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeE-EEEeeeeecccccCCCceeee
Q 009614 450 DGKVRIWEVRRCQVVD--YTDIREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKDNQL-YQQNQICLQGKKKLPGKRITG 525 (531)
Q Consensus 450 Dg~I~Iwd~~~~~~~~--~~~~~~~v~~v~~spdg~-~l~sgs~dg~I~iwd~~~~~l-~~~~~~~~~~~kk~~~~~It~ 525 (531)
||.|++||+++++.+. ...|...|++++|+|++. +|++|+.||.|++||+.+++. +..+.. .+...|+.
T Consensus 268 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-------~~~~~v~~ 340 (420)
T 3vl1_A 268 SGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI-------NEGTPINN 340 (420)
T ss_dssp TSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-------STTSCEEE
T ss_pred CCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-------cCCCCceE
Confidence 9999999999987663 345778999999999999 999999999999999998753 433332 12356666
Q ss_pred EEEe
Q 009614 526 FQVV 529 (531)
Q Consensus 526 l~f~ 529 (531)
+.|.
T Consensus 341 ~~~~ 344 (420)
T 3vl1_A 341 VYFA 344 (420)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 6553
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=3.5e-28 Score=250.20 Aligned_cols=244 Identities=16% Similarity=0.254 Sum_probs=199.6
Q ss_pred eccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 009614 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (531)
Q Consensus 235 ~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~ 314 (531)
...+.+++|+|++.+|++|+.||.|++|++.... ....+.+|...|.+++| ++++|++|+.||.|++||+.
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT-------KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe-------EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecc
Confidence 4567789999999999999999999999997543 33467899999999999 46799999999999999998
Q ss_pred c-CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeE
Q 009614 315 E-HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (531)
Q Consensus 315 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~ 393 (531)
. ......+..+...+.++.+.++. ...+.++.++.+.+|+... .+++..+.+|...|.+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~----------------~~l~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDG----------------LQLASGGNDNVVQIWDARS----SIPKFTKTNHNAAVKA 264 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTS----------------SEEEEEETTSCEEEEETTC----SSEEEEECCCSSCCCE
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCC----------------CEEEEEeCCCeEEEccCCC----CCccEEecCCcceEEE
Confidence 4 44555666666666666665532 1234566778899998775 4557778899999999
Q ss_pred EEEcCCC--eEEEEe--CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEE--eCCCeEEEEeCCCCeEE---
Q 009614 394 LSWSKNG--FLLSSS--ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISG--SIDGKVRIWEVRRCQVV--- 464 (531)
Q Consensus 394 l~~sp~~--~l~s~s--~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sg--s~Dg~I~Iwd~~~~~~~--- 464 (531)
++|+|++ ++++++ .|+.|++||+.+++++..+.+...|++++|+| ++.+|+++ +.||.|+|||+.+++..
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence 9999977 666665 79999999999999999999999999999999 89999984 48999999999997654
Q ss_pred EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 009614 465 DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 465 ~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~ 508 (531)
.+.+|...|++++|+|+|++|++++.||.|++|++.+++.+...
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 36789999999999999999999999999999999998877643
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=7.3e-28 Score=247.65 Aligned_cols=233 Identities=15% Similarity=0.228 Sum_probs=191.7
Q ss_pred ccceeeeccccceeeeC-CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCC-CEEEEEeCCC
Q 009614 229 GAMARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDG-QYLASGGEDG 306 (531)
Q Consensus 229 ~~~~~~~~~~~s~~fsp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg-~~Lasgs~Dg 306 (531)
..+.+|...+.+++|+| ++.+|++|+.||.|+||++...............+.+|...|++++|+|++ ++|++|+.||
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 34566788899999999 999999999999999999987643222223455788999999999999998 6999999999
Q ss_pred cEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe--
Q 009614 307 TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-- 384 (531)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 384 (531)
.|++||+.+++. +..+
T Consensus 155 ~i~iwd~~~~~~--------------------------------------------------------------~~~~~~ 172 (402)
T 2aq5_A 155 VILVWDVGTGAA--------------------------------------------------------------VLTLGP 172 (402)
T ss_dssp CEEEEETTTTEE--------------------------------------------------------------EEEECT
T ss_pred EEEEEECCCCCc--------------------------------------------------------------cEEEec
Confidence 999999977653 2333
Q ss_pred ecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--ecCCc-eEEEEEeeCCCCEEEEE---eCCCeEEEEe
Q 009614 385 QGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--SHNNY-VTSVAFNPVDDNYFISG---SIDGKVRIWE 457 (531)
Q Consensus 385 ~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~--~h~~~-V~sv~fsp~d~~~l~sg---s~Dg~I~Iwd 457 (531)
.+|...|.+++|+|++ +|++++.|+.|++||+++++.+..+ .|... +.+++|+| ++.+|++| +.|+.|++||
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEc
Confidence 5688999999999999 9999999999999999999999887 36655 89999999 89999999 7999999999
Q ss_pred CCCCeE---EEecCCCCceEEEEEccCCCEEEE-EeCCCcEEEEeCCCCeE-EEEeeeeecccccCCCceeeeEEEee
Q 009614 458 VRRCQV---VDYTDIREIVSAVCYCPDGKGGIV-GTMTGNCRFYDIKDNQL-YQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 458 ~~~~~~---~~~~~~~~~v~~v~~spdg~~l~s-gs~dg~I~iwd~~~~~l-~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+++.+. .....+...+.+++|+|++++|++ |+.||.|++||+.+++. +..+... .+...|++++|+|
T Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~------~~~~~v~~~~~sp 323 (402)
T 2aq5_A 252 TKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF------SSKESQRGMGYMP 323 (402)
T ss_dssp TTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE------CCSSCCSEEEECC
T ss_pred CccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc------ccCCcccceEEec
Confidence 998653 234467788999999999999965 55799999999998874 3333211 1346889999886
No 67
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=234.68 Aligned_cols=247 Identities=20% Similarity=0.270 Sum_probs=202.4
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+..|...+.+++|+|++.++++|+.||.|++|++..... ......+.+|...|.+++| ++++|++++.||.|++
T Consensus 55 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~ 128 (313)
T 3odt_A 55 VYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG----EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKV 128 (313)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT----SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred eecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC----CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEE
Confidence 344566788899999999999999999999999986432 2233467899999999999 5779999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec-CCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-HSS 389 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~ 389 (531)
|| .+.....+..+...+.++.+.+..... .+.++.++.+.+|+. .+....+.. |..
T Consensus 129 ~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~---------------l~~~~~d~~i~i~d~------~~~~~~~~~~~~~ 185 (313)
T 3odt_A 129 WK--EGSLVYNLQAHNASVWDAKVVSFSENK---------------FLTASADKTIKLWQN------DKVIKTFSGIHND 185 (313)
T ss_dssp EE--TTEEEEEEECCSSCEEEEEEEETTTTE---------------EEEEETTSCEEEEET------TEEEEEECSSCSS
T ss_pred Ec--CCcEEEecccCCCceeEEEEccCCCCE---------------EEEEECCCCEEEEec------CceEEEEeccCcc
Confidence 99 566666666666666666666533222 244566777888872 345666676 999
Q ss_pred CeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-Eec
Q 009614 390 EVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYT 467 (531)
Q Consensus 390 ~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~ 467 (531)
.|.+++|+|++.+++++.|+.|++||+++++++..+. |...|++++|+| ++ .|++++.||.|++||+.+++.+ .+.
T Consensus 186 ~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~ 263 (313)
T 3odt_A 186 VVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVIT 263 (313)
T ss_dssp CEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEE
T ss_pred cEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEe
Confidence 9999999999999999999999999999999998886 999999999999 77 6899999999999999999877 467
Q ss_pred CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
.|...|++++|+|+++ +++++.||.|++||+.++++.....
T Consensus 264 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 264 LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC---
T ss_pred ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhh
Confidence 7888999999999998 6679999999999999888765544
No 68
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-27 Score=239.99 Aligned_cols=264 Identities=12% Similarity=0.123 Sum_probs=210.2
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC-----
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED----- 305 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D----- 305 (531)
+..|...+.+++|+|++++|++++.||.|++|++..... ...+. |...|.+++|+|++++|++++.+
T Consensus 70 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~ 141 (369)
T 3zwl_B 70 LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC-------VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNP 141 (369)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE-------EEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBC
T ss_pred hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-------EEEee-cCCCeEEEEEccCCCEEEEecCCccCCC
Confidence 345667788899999999999999999999999985442 22344 88899999999999999999999
Q ss_pred CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
|.|++||+........+...................+..+.+... ....+.++.++.+.+|+.... ...+..+.
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~ 215 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK---GKYIIAGHKDGKISKYDVSNN---YEYVDSID 215 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG---GCEEEEEETTSEEEEEETTTT---TEEEEEEE
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC---CCEEEEEcCCCEEEEEECCCC---cEeEEEEe
Confidence 999999998876554443332222111111111112333322221 123355677888999987652 24577888
Q ss_pred cCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCC-------------
Q 009614 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDG------------- 451 (531)
Q Consensus 386 ~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg------------- 451 (531)
.|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.+...+.+++|+| ++.++++++.++
T Consensus 216 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~ 294 (369)
T 3zwl_B 216 LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGK 294 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECS-SSSEEEEEECCC-------------
T ss_pred cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCc
Confidence 899999999999999 99999999999999999999999999999999999999 999999999988
Q ss_pred -eEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 452 -KVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 452 -~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
.|++||+.+++.+ .+..|...|++++|+|++++|++++.||.|+||++..+.+..++.
T Consensus 295 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 354 (369)
T 3zwl_B 295 FEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYD 354 (369)
T ss_dssp CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCH
T ss_pred ceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHH
Confidence 8999999998877 478899999999999999999999999999999998876655443
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.2e-28 Score=248.37 Aligned_cols=273 Identities=16% Similarity=0.198 Sum_probs=212.4
Q ss_pred eeeeccccceeeeCC----CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC----CCEEEEEe
Q 009614 232 ARIIDRHGSATLKPG----DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD----GQYLASGG 303 (531)
Q Consensus 232 ~~~~~~~~s~~fspd----g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd----g~~Lasgs 303 (531)
.+|...+.+++|+|+ ...+++++.++.|++|++....... . ........|...|++++|+|+ +++|++|+
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~-~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR-L-LQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE-E-EEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE-e-eeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 356778889999994 5567777778899999998543211 0 011111237788999999998 67999999
Q ss_pred CCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 304 EDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 304 ~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
.||.|++||+.+++.+..+..+...+.++.+.+.... ..+.++.++.+.+|+.... +.+..
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------~l~s~~~dg~i~iwd~~~~----~~~~~ 153 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN---------------LLLSVSKDHALRLWNIQTD----TLVAI 153 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT---------------EEEEEETTSCEEEEETTTT----EEEEE
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC---------------EEEEEeCCCeEEEEEeecC----eEEEE
Confidence 9999999999999988888877777888777663222 2244566788999987653 34555
Q ss_pred e---ecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-----------------------------cCCc
Q 009614 384 F---QGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-----------------------------HNNY 430 (531)
Q Consensus 384 ~---~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-----------------------------h~~~ 430 (531)
+ .+|...|.+++|+|++ +|++++.|+.|++||+++++.+..+. |...
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred ecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 5 6899999999999999 99999999999999999876543332 8899
Q ss_pred eEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeE--------------E-EecCCCCceEEEEEccC--CCEEEEEeCCCc
Q 009614 431 VTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV--------------V-DYTDIREIVSAVCYCPD--GKGGIVGTMTGN 493 (531)
Q Consensus 431 V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~--------------~-~~~~~~~~v~~v~~spd--g~~l~sgs~dg~ 493 (531)
|++++|+ +++|++++.|+.|++||+.+... + .+..|...|++++|+|+ +++|++|+.||.
T Consensus 234 v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~ 310 (366)
T 3k26_A 234 VDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGK 310 (366)
T ss_dssp CCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSC
T ss_pred EEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCc
Confidence 9999998 57999999999999999987532 3 57778889999999999 999999999999
Q ss_pred EEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 494 CRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 494 I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
|++||+.+++........+.++ .+...|++++|+|
T Consensus 311 i~vwd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~ 345 (366)
T 3k26_A 311 LYVWDLEVEDPHKAKCTTLTHH--KCGAAIRQTSFSR 345 (366)
T ss_dssp EEEEECCSSSGGGCEEEEECCT--TCCSCEEEEEECT
T ss_pred EEEEECCCCCCccccceEEccc--ccCCceEEEEeCC
Confidence 9999999987554322222222 1257899999986
No 70
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.7e-28 Score=247.12 Aligned_cols=241 Identities=15% Similarity=0.192 Sum_probs=193.0
Q ss_pred ccccceeeeCC----CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc-CCCEEEEEeCCCcEEE
Q 009614 236 DRHGSATLKPG----DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRV 310 (531)
Q Consensus 236 ~~~~s~~fspd----g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~Lasgs~Dg~I~i 310 (531)
..+.+++|+|+ +.+|++|+.||.|++|++.... ....+.+|...|++++|+| ++++|++|+.||.|++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~i 142 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ-------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRL 142 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC-------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce-------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 55778999999 6799999999999999988543 3346789999999999999 9999999999999999
Q ss_pred EEcccCccccce---ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccccc----------
Q 009614 311 WKVIEHERLDGF---DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL---------- 377 (531)
Q Consensus 311 Wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 377 (531)
||+.+++....+ ..+...+.++.+.++.. ..+.++.++.+.+|+.......
T Consensus 143 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 143 WNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE----------------KIMSCGMDHSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp EETTTTEEEEEECSTTSCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEESCSHHHHHHHHHHHTCC
T ss_pred EEeecCeEEEEecccccccCceeEEEECCCCC----------------EEEEecCCCCEEEEECCCCccccccceeEEec
Confidence 999998877776 45555666666655332 2244556677888876543221
Q ss_pred --------------CcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeE--------------EEEee-cC
Q 009614 378 --------------EKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRC--------------LRVFS-HN 428 (531)
Q Consensus 378 --------------~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~--------------l~~~~-h~ 428 (531)
........+|...|.+++|+ ..+|++++.|+.|++||+.++.. +..+. |.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ 285 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS
T ss_pred CCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccC
Confidence 01233445599999999999 33999999999999999987643 55554 88
Q ss_pred CceEEEEEeeCC--CCEEEEEeCCCeEEEEeCCCCe-----EEEecCC--CCceEEEEEccCCCEEEEEeCCCcEEEEeC
Q 009614 429 NYVTSVAFNPVD--DNYFISGSIDGKVRIWEVRRCQ-----VVDYTDI--REIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 429 ~~V~sv~fsp~d--~~~l~sgs~Dg~I~Iwd~~~~~-----~~~~~~~--~~~v~~v~~spdg~~l~sgs~dg~I~iwd~ 499 (531)
..|++++|+| + +++|++|+.||.|++||+.+++ ...+..| ...|++++|+|++++|++++.||.|+|||+
T Consensus 286 ~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 286 CDIWYMRFSM-DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp CCSSCCCCEE-CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEEcC-CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 8999999999 8 9999999999999999999864 2246666 789999999999999999999999999998
Q ss_pred CC
Q 009614 500 KD 501 (531)
Q Consensus 500 ~~ 501 (531)
.+
T Consensus 365 ~~ 366 (366)
T 3k26_A 365 LR 366 (366)
T ss_dssp --
T ss_pred cC
Confidence 53
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=4.4e-27 Score=254.14 Aligned_cols=255 Identities=18% Similarity=0.226 Sum_probs=209.7
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCC-EEEEEEcc--CCCEEEEEeCCCcEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGS-ILTMKFSL--DGQYLASGGEDGTVR 309 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~-I~~l~fsp--dg~~Lasgs~Dg~I~ 309 (531)
.+...+.+++|+|+++++++++ ++.|+||++.+.... ......+.+|.+. |++++|+| ++++|++|+.||.|+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~---~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~ 91 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSK---VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI 91 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCS---SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCc---cccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEE
Confidence 3457788899999999999998 899999999854211 1234568899999 99999999 999999999999999
Q ss_pred EEEcccC--------ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcce
Q 009614 310 VWKVIEH--------ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL 381 (531)
Q Consensus 310 iWd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (531)
+||+.++ .....+..+...+.++.+.++....+.. ..+ ....+.+.+|+. .+.+
T Consensus 92 vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~-----------~~~~~~v~~~d~------~~~~ 153 (615)
T 1pgu_A 92 VWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV-GEG-----------RDNFGVFISWDS------GNSL 153 (615)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE-ECC-----------SSCSEEEEETTT------CCEE
T ss_pred EEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe-ccC-----------CCCccEEEEEEC------CCcc
Confidence 9999755 5555666666666677666554322211 100 011256777773 3467
Q ss_pred eEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEee-cCC---ceEEEEEeeCC-CCEEEEEeCCCeEE
Q 009614 382 HEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNN---YVTSVAFNPVD-DNYFISGSIDGKVR 454 (531)
Q Consensus 382 ~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~---~V~sv~fsp~d-~~~l~sgs~Dg~I~ 454 (531)
..+.+|...|.+++|+|++ .|++++.|+.|++||+.+++++..+. |.. .|++++|+| + +++|++++.||.|+
T Consensus 154 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKIS 232 (615)
T ss_dssp EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEE
T ss_pred eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEE
Confidence 7888999999999999998 79999999999999999999998886 888 899999999 7 99999999999999
Q ss_pred EEeCCCCeEEEec-----CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 455 IWEVRRCQVVDYT-----DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 455 Iwd~~~~~~~~~~-----~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
+||+.+++.+... .|...|.+++|+ ++++|++++.||.|++||+.+++.+..+...
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 9999999888644 899999999999 9999999999999999999999988776643
No 72
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=273.57 Aligned_cols=252 Identities=18% Similarity=0.246 Sum_probs=204.6
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC--CCEEEEEeCCCc
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD--GQYLASGGEDGT 307 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd--g~~Lasgs~Dg~ 307 (531)
.+.+|.+.+.+++|+|+++++++|+.||.|+||++.... ......+.+|.++|++++|+|+ +++|++|+.||+
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-----~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-----CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 456788899999999999999999999999999987432 2233568899999999999988 999999999999
Q ss_pred EEEEEcccCc--cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 308 VRVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 308 I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
|++||+.+++ ....+..+...+.++.+.+.... ...+.++.++.+.+|+...... .....+.
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~--------------~~l~sgs~dg~I~vwdl~~~~~--~~~~~~~ 142 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG--------------PLLLVASSDGKVSVVEFKENGT--TSPIIID 142 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC--------------SEEEEEETTSEEEEEECCSSSC--CCCEEEE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCC--------------CEEEEEeCCCcEEEEEeecCCC--cceeEee
Confidence 9999999886 55556666666777777665211 1234567788899998765422 2345678
Q ss_pred cCCCCeeEEEEcCC-------------C-eEEEEeCCCcEEEEECCCC----eEEEEee-cCCceEEEEEeeCC---CCE
Q 009614 386 GHSSEVLDLSWSKN-------------G-FLLSSSADKTVRLWQVGID----RCLRVFS-HNNYVTSVAFNPVD---DNY 443 (531)
Q Consensus 386 ~h~~~I~~l~~sp~-------------~-~l~s~s~Dg~V~lwdl~~~----~~l~~~~-h~~~V~sv~fsp~d---~~~ 443 (531)
+|...|.+++|+|. + +|++|+.||+|++||++++ .++..+. |...|++++|+| + +.+
T Consensus 143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~~~~ 221 (753)
T 3jro_A 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSY 221 (753)
T ss_dssp CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEE
T ss_pred cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCCCCCE
Confidence 89999999999993 6 9999999999999999876 4444554 899999999999 7 899
Q ss_pred EEEEeCCCeEEEEeCCCCe------EEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 444 FISGSIDGKVRIWEVRRCQ------VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 444 l~sgs~Dg~I~Iwd~~~~~------~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
|++|+.||.|++||+.+++ ......|...|++++|+|+|++|++|+.||.|++|++..+.
T Consensus 222 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 9999999999999999863 22355688899999999999999999999999999998543
No 73
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=1.3e-27 Score=280.02 Aligned_cols=245 Identities=21% Similarity=0.308 Sum_probs=212.5
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+.+|.+.+.+++|+|+|+++|+|+.||.|+||+..+.. ....+.+|.+.|.+++|+|+|++|++|+.||+|+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE-------KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC-------EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 45677888899999999999999999999999998544 33468899999999999999999999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
||+.+++.+..+..+...+.++.+.+.....+ .+.++.++.+.+|+... .+.+..+.+|.+.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--------------l~sg~~d~~v~vwd~~~----~~~~~~~~~h~~~ 745 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLL--------------LATGSNDFFLKLWDLNQ----KECRNTMFGHTNS 745 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCE--------------EEEEETTSCEEEEETTS----SSEEEEECCCSSC
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceE--------------EEEEeCCCeEEEEECCC----cchhheecCCCCC
Confidence 99999999888888888888887776543332 24566778899998765 3457788899999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--------------------------------------------
Q 009614 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-------------------------------------------- 425 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~-------------------------------------------- 425 (531)
|.+++|+|++ +|++++.|++|++||+.+++....+
T Consensus 746 v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 746 VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 9999999999 9999999999999999776544332
Q ss_pred ------------ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCC
Q 009614 426 ------------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 426 ------------~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg 492 (531)
.|...|++++|+| ++.++++++.||.|++||+.++..+ .+.+|...|++++|+|+|++|++++.||
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCC
Confidence 3667889999999 9999999999999999999998877 5788999999999999999999999999
Q ss_pred cEEEEeCCC
Q 009614 493 NCRFYDIKD 501 (531)
Q Consensus 493 ~I~iwd~~~ 501 (531)
.|++|++.+
T Consensus 905 ~v~vw~~~~ 913 (1249)
T 3sfz_A 905 TIRVWETKK 913 (1249)
T ss_dssp CEEEEEHHH
T ss_pred eEEEEEccc
Confidence 999999764
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-28 Score=262.24 Aligned_cols=242 Identities=11% Similarity=0.026 Sum_probs=175.1
Q ss_pred CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC------CCEEEEEeCCCcEEEEEcccCcccc
Q 009614 247 DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD------GQYLASGGEDGTVRVWKVIEHERLD 320 (531)
Q Consensus 247 g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd------g~~Lasgs~Dg~I~iWd~~~~~~~~ 320 (531)
+..+++++.|++|+||++....... .....+.+|.+.|++|+|+|+ +.+||+|+.||+|+|||+.++....
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~~~~---~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTSTLHC---VKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ---------CEEEEEEEEETTTCCE---EEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred hhhhccCCCCceEEEEEccCCCCCc---eEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 3344556688999999987543211 112346778899999999996 5799999999999999998764321
Q ss_pred ceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEE--EEcC
Q 009614 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL--SWSK 398 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l--~~sp 398 (531)
........ .......+...+.++.+... ..++.++.|+.+.+|+.... ..+...+.+|...|.+| .|+|
T Consensus 250 ~~~~~~~~--p~~~l~~h~~~v~sv~~s~~----~~lasgs~DgtV~lWD~~~~---~~~~~~~~~H~~~V~sv~~~~s~ 320 (524)
T 2j04_B 250 HVFKMCEK--PSLTLSLADSLITTFDFLSP----TTVVCGFKNGFVAEFDLTDP---EVPSFYDQVHDSYILSVSTAYSD 320 (524)
T ss_dssp SEEECCCS--CSEEECCTTTCEEEEEESSS----SEEEEEETTSEEEEEETTBC---SSCSEEEECSSSCEEEEEEECCT
T ss_pred ccceeecC--ceEEEEcCCCCEEEEEecCC----CeEEEEeCCCEEEEEECCCC---CCceEEeecccccEEEEEEEcCC
Confidence 00000000 00011112233333333321 13567889999999998753 23456788999999999 5788
Q ss_pred CC--eEEEEeCCCcEEEEECCCCeEEEEee-cC--CceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeE-EEecCCCCc
Q 009614 399 NG--FLLSSSADKTVRLWQVGIDRCLRVFS-HN--NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV-VDYTDIREI 472 (531)
Q Consensus 399 ~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~--~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~-~~~~~~~~~ 472 (531)
++ +|++++.|++|+|||+++++++..+. |. ..|.+++|+| ++..|++++.|++|+|||++++.+ ..+.+|...
T Consensus 321 ~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~ 399 (524)
T 2j04_B 321 FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT 399 (524)
T ss_dssp TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC
T ss_pred CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCc
Confidence 75 78999999999999999887766653 43 3588999999 899999999999999999999876 357789999
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 473 v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
|++|+|+|+|++|++|+.||+|++||+..
T Consensus 400 V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 400 ITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred eEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 99999999999999999999999999754
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=243.49 Aligned_cols=248 Identities=13% Similarity=0.194 Sum_probs=192.1
Q ss_pred eeeccccceeeeCC---CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEE------EccCCCEEEEEe
Q 009614 233 RIIDRHGSATLKPG---DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMK------FSLDGQYLASGG 303 (531)
Q Consensus 233 ~~~~~~~s~~fspd---g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~------fspdg~~Lasgs 303 (531)
.|...+.+++|+|+ +.++++|+.||.|++|++..... ....+.+|...|.++. |+|++++|++|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~ 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM------PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS------CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc------cEEEEEecccceEEEeeccccccCCCccEEEEEe
Confidence 35567888999999 69999999999999999986541 2346889999999995 468999999999
Q ss_pred CCCcEEEEEcccCc-cccceecCCC----CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 304 EDGTVRVWKVIEHE-RLDGFDVQDT----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 304 ~Dg~I~iWd~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
.||.|++||+.++. ....+..+.. .+.++.+... +. ......+.++.++.+.+|+.....
T Consensus 137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~---~~~~~l~~~~~d~~i~i~d~~~~~--- 201 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA---------YN---QEERVVCAGYDNGDIKLFDLRNMA--- 201 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC---------CC----CCCEEEEEETTSEEEEEETTTTE---
T ss_pred CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec---------cC---CCCCEEEEEccCCeEEEEECccCc---
Confidence 99999999999876 4555544333 2222222110 00 011233456677889999877643
Q ss_pred cceeEeecCCCCeeEEEEcC---CC-eEEEEeCCCcEEEEECCCCeEEEEe------ecCCceEEEEEeeCCCC-EEEEE
Q 009614 379 KPLHEFQGHSSEVLDLSWSK---NG-FLLSSSADKTVRLWQVGIDRCLRVF------SHNNYVTSVAFNPVDDN-YFISG 447 (531)
Q Consensus 379 ~~~~~~~~h~~~I~~l~~sp---~~-~l~s~s~Dg~V~lwdl~~~~~l~~~------~h~~~V~sv~fsp~d~~-~l~sg 447 (531)
......|...|.+++|+| ++ +|++++.|+.|++||+++++++..+ .|...|++++|+| ++. +|++|
T Consensus 202 --~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~ 278 (357)
T 3i2n_A 202 --LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP-QNRELFLTA 278 (357)
T ss_dssp --EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET-TEEEEEEEE
T ss_pred --eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC-CCCcEEEEE
Confidence 234467889999999999 77 9999999999999999876654433 4899999999999 777 89999
Q ss_pred eCCCeEEEEeCCCC-------------------e-EEEecCCCCceEEEEEccCCCEEE-EEeCCCcEEEEeCCCCeE
Q 009614 448 SIDGKVRIWEVRRC-------------------Q-VVDYTDIREIVSAVCYCPDGKGGI-VGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 448 s~Dg~I~Iwd~~~~-------------------~-~~~~~~~~~~v~~v~~spdg~~l~-sgs~dg~I~iwd~~~~~l 504 (531)
+.||.|++||++.+ + +..+..|...|++++|+|++++|+ +++.||.|+|||+.+.++
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 99999999999753 2 335778999999999999999998 799999999999987654
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=1.7e-27 Score=238.08 Aligned_cols=266 Identities=11% Similarity=0.079 Sum_probs=204.9
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCC-EEEEEeCCCcEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQ-YLASGGEDGTVR 309 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~-~Lasgs~Dg~I~ 309 (531)
...|.+.+.+++|+|++.+|++|+.||.|+||++....... ....+.+|...|++++|+|+++ +|++|+.||.|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV----DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE----EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc----cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 34677888999999999999999999999999987554211 1234568999999999999999 999999999999
Q ss_pred EEEc-ccCccccceec--CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccccc-----Ccce
Q 009614 310 VWKV-IEHERLDGFDV--QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL-----EKPL 381 (531)
Q Consensus 310 iWd~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 381 (531)
+||+ .+++. ..+.. +...+.++.+.+ .. ..+.++.++.+.+|+....... .+++
T Consensus 83 ~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~---------------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 83 KVDLIGSPSF-QALTNNEANLGICRICKYG--DD---------------KLIAASWDGLIEVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EECSSSSSSE-EECBSCCCCSCEEEEEEET--TT---------------EEEEEETTSEEEEECHHHHTTBCEEEEESCS
T ss_pred EEEeccCCce-EeccccCCCCceEEEEeCC--CC---------------EEEEEcCCCeEEEEcccccccccccccCCee
Confidence 9999 77654 44554 555566666654 11 2245567788899987651110 2234
Q ss_pred eEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCC-CeEE---EEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEe
Q 009614 382 HEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGI-DRCL---RVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (531)
Q Consensus 382 ~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~-~~~l---~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd 457 (531)
..+. |...|.+++|+|++ +++++.|+.|++||+++ +... ....|...|++++|+|.++++|++++.||.|+||+
T Consensus 145 ~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 145 NNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEF 222 (342)
T ss_dssp SSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred eEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEE
Confidence 4444 88999999999987 99999999999999988 5432 33348889999999984578999999999999999
Q ss_pred CCCC------eEE-EecCCCC---------ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCc
Q 009614 458 VRRC------QVV-DYTDIRE---------IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGK 521 (531)
Q Consensus 458 ~~~~------~~~-~~~~~~~---------~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~ 521 (531)
+... +.. .+..|.. .|++++|+|++++|++++.||.|++||+.+++++..+..+ +..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-------h~~ 295 (342)
T 1yfq_A 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-------NED 295 (342)
T ss_dssp CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-------SSS
T ss_pred EcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc-------cCC
Confidence 9775 332 4555544 9999999999999999999999999999999887654321 145
Q ss_pred eeeeEE
Q 009614 522 RITGFQ 527 (531)
Q Consensus 522 ~It~l~ 527 (531)
.|++++
T Consensus 296 ~v~~~~ 301 (342)
T 1yfq_A 296 SVVKIA 301 (342)
T ss_dssp EEEEEE
T ss_pred CceEec
Confidence 666665
No 77
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.2e-27 Score=246.71 Aligned_cols=257 Identities=17% Similarity=0.237 Sum_probs=202.8
Q ss_pred ceeeeccccceeeeCC-CCeEEeeecCCeEEEEeCCCCcccc---cccccceEEcccCCCEEEEEEccCCC-EEEEEeCC
Q 009614 231 MARIIDRHGSATLKPG-DHELTLGQRMRRVRVHPVKKQSREL---SSLYTGQEFLAHEGSILTMKFSLDGQ-YLASGGED 305 (531)
Q Consensus 231 ~~~~~~~~~s~~fspd-g~~lasgs~dg~I~vwd~~~~~~~~---~~~~~~~~l~~H~~~I~~l~fspdg~-~Lasgs~D 305 (531)
...|.+.+.+++|+|+ +.++|+|+.+|.|+||++....... ........+.+|...|++|+|+|++. +|++|+.|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 4457788899999997 6799999999999999997532111 11334457889999999999999988 99999999
Q ss_pred CcEEEEEcccCcc-------ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 306 GTVRVWKVIEHER-------LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 306 g~I~iWd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
|.|++|++.++.. ...+..+...+.++.|.+.... ..+.++.++.+.+|+.+.... .
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~---------------~l~s~~~dg~i~i~d~~~~~~-~ 267 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHES---------------LFGSVADDQKLMIWDTRNNNT-S 267 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTT---------------EEEEEETTSEEEEEETTCSCS-S
T ss_pred CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCC---------------EEEEEeCCCeEEEEECCCCCC-C
Confidence 9999999987432 2223344444555555443222 234556788899998875321 2
Q ss_pred cceeEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCC-CeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEE
Q 009614 379 KPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGI-DRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVR 454 (531)
Q Consensus 379 ~~~~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~-~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~ 454 (531)
+++..+..|...|++++|+|++ +|++|+.|++|++||+++ ..++..+. |...|++++|+|....+|++++.|+.|+
T Consensus 268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 4567778999999999999988 688999999999999997 56677775 9999999999993336899999999999
Q ss_pred EEeCCC--------------CeE-EEecCCCCceEEEEEccCCC-EEEEEeCCCcEEEEeCCCCe
Q 009614 455 IWEVRR--------------CQV-VDYTDIREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 455 Iwd~~~--------------~~~-~~~~~~~~~v~~v~~spdg~-~l~sgs~dg~I~iwd~~~~~ 503 (531)
|||+.. .++ ....+|...|++++|+|+++ +|++++.||.|+||++..+.
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 999987 233 35678889999999999999 89999999999999997644
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=5.6e-28 Score=244.36 Aligned_cols=252 Identities=12% Similarity=0.127 Sum_probs=198.4
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+..|...+.+++|+|++.++++|+.||.|++|++...... ....+.+|...|.+++|+|++++|++|+.||.|+
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 121 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK-----PTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS 121 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE-----EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee-----eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEE
Confidence 34556778889999999999999999999999998654321 1223467999999999999999999999999999
Q ss_pred EEEcccCcc---ccce-ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccc----------
Q 009614 310 VWKVIEHER---LDGF-DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFR---------- 375 (531)
Q Consensus 310 iWd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 375 (531)
+||+..+.. ...+ ..+...+.++.+.++. ...+.++.++.+.+|+.....
T Consensus 122 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 185 (372)
T 1k8k_C 122 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS----------------VLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 185 (372)
T ss_dssp EEEEETTTTEEEEEEECTTCCSCEEEEEECTTS----------------SEEEEEETTSCEEEEECCCTTTSCCCCCBTT
T ss_pred EEEecCCCcceeeeeeecccCCCeeEEEEcCCC----------------CEEEEEcCCCCEEEEEccccccccccccccc
Confidence 999988763 1222 2233444455544432 123455667788888854211
Q ss_pred ----ccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeC
Q 009614 376 ----LLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSI 449 (531)
Q Consensus 376 ----~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~ 449 (531)
...+.+..+.+|...|.+++|+|++ +|++++.|+.|++||+++++++..+. |...|++++|+| ++.+|++| .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~ 263 (372)
T 1k8k_C 186 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT-ESSLVAAG-H 263 (372)
T ss_dssp BSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEE-TTEEEEEE-T
T ss_pred ccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEec-CCCEEEEE-e
Confidence 1245677788999999999999999 99999999999999999999998886 888999999999 88888887 8
Q ss_pred CCeEEEEeCCC--CeE---------------------------------------EEe-cCCCCceEEEEEc-cCC---C
Q 009614 450 DGKVRIWEVRR--CQV---------------------------------------VDY-TDIREIVSAVCYC-PDG---K 483 (531)
Q Consensus 450 Dg~I~Iwd~~~--~~~---------------------------------------~~~-~~~~~~v~~v~~s-pdg---~ 483 (531)
|+.|++|++.+ ++. ..+ .+|...|++++|. ++| .
T Consensus 264 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~ 343 (372)
T 1k8k_C 264 DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS 343 (372)
T ss_dssp TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS
T ss_pred CCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee
Confidence 99999999988 431 122 4889999999977 566 9
Q ss_pred EEEEEeCCCcEEEEeCCCCeE
Q 009614 484 GGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 484 ~l~sgs~dg~I~iwd~~~~~l 504 (531)
+|++|+.||.|++|++.+++.
T Consensus 344 ~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 344 QFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp EEEEEETTSEEEEEEHHHHHH
T ss_pred eEEEecCCCceEEEEecChhH
Confidence 999999999999999977543
No 79
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.4e-27 Score=242.95 Aligned_cols=196 Identities=10% Similarity=0.103 Sum_probs=159.6
Q ss_pred cccceeeeCCCCeEEe--eecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 009614 237 RHGSATLKPGDHELTL--GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (531)
Q Consensus 237 ~~~s~~fspdg~~las--gs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~ 314 (531)
.+.+++|+|||+++|+ |+.|++|+|||....... ..+ .|.+.|++|+|+|||++|++++.|+ +++|+..
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~-------~~~-~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~ 205 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK-------FEI-ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTV 205 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE-------EEE-ECSSCCCEEEECTTSSEEEEECSSC-EEEEETT
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE-------EEe-CCCCceEEEEEccCCceEEecccee-EEEEEec
Confidence 3556899999999865 557899999999854432 233 4788999999999999999998654 6666665
Q ss_pred cCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEE
Q 009614 315 EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (531)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l 394 (531)
++.... .....+|...|.++
T Consensus 206 ~~~~~~------------------------------------------------------------~~~~~~~~~~v~~v 225 (365)
T 4h5i_A 206 TGSCIA------------------------------------------------------------RKTDFDKNWSLSKI 225 (365)
T ss_dssp TCCEEE------------------------------------------------------------EECCCCTTEEEEEE
T ss_pred cCccee------------------------------------------------------------eeecCCCCCCEEEE
Confidence 544211 12234578889999
Q ss_pred EEcCCC-eEEEEeCCC----cEEEEECCCCeEE----EEe-ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE
Q 009614 395 SWSKNG-FLLSSSADK----TVRLWQVGIDRCL----RVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (531)
Q Consensus 395 ~~sp~~-~l~s~s~Dg----~V~lwdl~~~~~l----~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~ 464 (531)
+|+|++ ++++++.|+ .+++|++...... ..+ .|...|++++|+| ++++||+|+.|++|+|||+.+++++
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEE
Confidence 999999 889988887 6889998776542 222 3889999999999 9999999999999999999999987
Q ss_pred E--ecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q 009614 465 D--YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 465 ~--~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~ 502 (531)
. +.+|...|++|+|+|||++||+|+.|++|+||++..+
T Consensus 305 ~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 5 3679999999999999999999999999999999654
No 80
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=5.5e-27 Score=231.27 Aligned_cols=232 Identities=17% Similarity=0.189 Sum_probs=179.8
Q ss_pred EEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC--ccccceecCCCCCeeEEEeecCCcceeeeecccccccccc
Q 009614 279 EFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH--ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (531)
Q Consensus 279 ~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (531)
.+.+|.+.|++++|+|+|++||+|+.|++|+||++... +.+..+..+...+.++.|.+.... ..
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g--------------~~ 69 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG--------------TI 69 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC--------------SE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC--------------CE
Confidence 46789999999999999999999999999999999743 455666667666666666543211 22
Q ss_pred ccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeE--EEEe-ecCCc
Q 009614 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRC--LRVF-SHNNY 430 (531)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~--~-~l~s~s~Dg~V~lwdl~~~~~--l~~~-~h~~~ 430 (531)
.++++.|+.+.+|+..... ...+..+.+|...|.+++|+|+ + +|++++.|++|++||++++.. ...+ .|...
T Consensus 70 l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp EEEEETTTEEEEEEBSSSC--BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC
T ss_pred EEEEcCCCEEEEEEcCCCc--eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc
Confidence 3567788899999876422 1245667889999999999997 6 999999999999999987632 2233 59999
Q ss_pred eEEEEEeeCC-------------CCEEEEEeCCCeEEEEeCCCCe----EE-EecCCCCceEEEEEccCC---CEEEEEe
Q 009614 431 VTSVAFNPVD-------------DNYFISGSIDGKVRIWEVRRCQ----VV-DYTDIREIVSAVCYCPDG---KGGIVGT 489 (531)
Q Consensus 431 V~sv~fsp~d-------------~~~l~sgs~Dg~I~Iwd~~~~~----~~-~~~~~~~~v~~v~~spdg---~~l~sgs 489 (531)
|++++|+| + +++|++|+.|++|+|||+++++ .. .+.+|...|.+++|+|++ .+|++++
T Consensus 148 v~~~~~~p-~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 148 VNSASWAP-ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp EEEEEECC-CC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred cceEeecC-CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 99999999 4 5799999999999999998754 33 578899999999999985 8999999
Q ss_pred CCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 490 MTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 490 ~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.|++|+|||+.++....... .+. ...+...|.+++|+|
T Consensus 227 ~D~~v~iWd~~~~~~~~~~~-~~~--~~~~~~~v~~~~~s~ 264 (297)
T 2pm7_B 227 QDRTCIIWTQDNEQGPWKKT-LLK--EEKFPDVLWRASWSL 264 (297)
T ss_dssp TTSCEEEEEESSTTSCCEEE-ESS--SSCCSSCEEEEEECS
T ss_pred CCCcEEEEEeCCCCCcccee-eee--cccCCCcEEEEEECC
Confidence 99999999998753211111 010 123346789999987
No 81
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=2.5e-27 Score=240.29 Aligned_cols=253 Identities=19% Similarity=0.238 Sum_probs=173.3
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC------CCcEEEEEcc
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE------DGTVRVWKVI 314 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~------Dg~I~iWd~~ 314 (531)
+.+.+++.++ .+..+.....|++... ...+|...|++|+|+|||++||+|+. |+.|++|+..
T Consensus 11 ~d~g~~~~~~-~~~g~~~~~~w~~p~~-----------~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~ 78 (357)
T 4g56_B 11 VDLGTENLYF-QSNGSSKGSAWGRPVT-----------APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDP 78 (357)
T ss_dssp -----------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSC
T ss_pred CCCCccceEE-ecCCCccccccCCCCC-----------CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECC
Confidence 4455555444 3444677888876521 23469999999999999999999998 7789999987
Q ss_pred cCccccce----ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 315 EHERLDGF----DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 315 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
++.....+ ..+...+.++.|.++. ..+.++.++.+.+|+...............+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~V~~~~~s~d~-----------------~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~ 141 (357)
T 4g56_B 79 EGAPNESLCTAGVQTEAGVTDVAWVSEK-----------------GILVASDSGAVELWEILEKESLLVNKFAKYEHDDI 141 (357)
T ss_dssp C---CGGGCSEEEECSSCEEEEEEETTT-----------------EEEEEETTSCEEEC--------CCCCEEECCCSSC
T ss_pred CCCcceeEecccCCCCCCEEEEEEcCCC-----------------CEEEEECCCEEEEeeccccceeEEEeeccCCCCCC
Confidence 76543332 2334445555555432 12345667889999876654433334456689999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE---
Q 009614 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD--- 465 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~--- 465 (531)
|++++|+|++ +|++++.|++|++||+.+++++..+. |...|++++|+|....+|++++.|+.|+|||+++++...
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID 221 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee
Confidence 9999999999 99999999999999999999999886 999999999999444689999999999999999987653
Q ss_pred ecCCCCceEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 466 YTDIREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 466 ~~~~~~~v~~v~~spdg-~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
...+...+++++|+|++ .+|++|+.|+.|++||+.+++++..+. .+...|++++|+|
T Consensus 222 ~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~--------~~~~~v~~l~~sp 279 (357)
T 4g56_B 222 FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA--------VHSQNITGLAYSY 279 (357)
T ss_dssp CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC--------CCSSCEEEEEECS
T ss_pred eccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe--------ccceeEEEEEEcC
Confidence 44567789999999974 688999999999999999988766543 2346889999986
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-26 Score=241.78 Aligned_cols=268 Identities=13% Similarity=0.081 Sum_probs=199.5
Q ss_pred eccccceeeeCCCCeEEeeecCCeEEEEeCCCCc---cccc--c------------------------------------
Q 009614 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQS---RELS--S------------------------------------ 273 (531)
Q Consensus 235 ~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~---~~~~--~------------------------------------ 273 (531)
..++.+++|+|+|++++++ .++.|++|++.++. .... .
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3466788999999966665 57899999987665 1100 0
Q ss_pred ---------cccceEEcccCCCEEEEEEccCCCEE-EEEeCCCcEEEEEcc--cCcccccee--cCCCCCeeEEEeecCC
Q 009614 274 ---------LYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVI--EHERLDGFD--VQDTDPSCLYFTINHL 339 (531)
Q Consensus 274 ---------~~~~~~l~~H~~~I~~l~fspdg~~L-asgs~Dg~I~iWd~~--~~~~~~~~~--~~~~~~~~~~~~~~~~ 339 (531)
........+|.+.|++++|+|++++| ++|+.||.|+|||+. +++.+..+. .+...+.++.|.++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 00011223567789999999999996 899999999999998 777766665 2334455555554332
Q ss_pred cceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCC---C-eEEEEeCCCcEEEEE
Q 009614 340 SQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN---G-FLLSSSADKTVRLWQ 415 (531)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~---~-~l~s~s~Dg~V~lwd 415 (531)
..+.++.++.+.+|+.........+...+.+|...|.+++|+|+ + +|++++.|++|++||
T Consensus 163 ----------------~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd 226 (450)
T 2vdu_B 163 ----------------TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH 226 (450)
T ss_dssp ----------------EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred ----------------EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence 12334456777777765443322244577889999999999999 8 999999999999999
Q ss_pred CCCCeEEEEe--ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec--------------------------
Q 009614 416 VGIDRCLRVF--SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT-------------------------- 467 (531)
Q Consensus 416 l~~~~~l~~~--~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~-------------------------- 467 (531)
+.+++++..+ .|...|++++|+ ++++|++|+.|+.|+|||+.+++++...
T Consensus 227 ~~~~~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (450)
T 2vdu_B 227 YPQCFIVDKWLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND 304 (450)
T ss_dssp ESCTTCEEEECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------
T ss_pred CCCCceeeeeecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc
Confidence 9999888774 499999999999 8999999999999999999999876422
Q ss_pred CCCCceEEEEEccCCCEEEEEe-CCCcEEEEeC--CCC---eEEEEeeeeecccccCCCceeeeEEEee
Q 009614 468 DIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDI--KDN---QLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~--~~~---~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.....|..++|+|++++|++++ .++.|+||++ .++ +++..+. + + ..|++++|+|
T Consensus 305 ~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~----~----~-~~v~~~~~~~ 364 (450)
T 2vdu_B 305 IIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT----F----P-YNVISLSAHN 364 (450)
T ss_dssp CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE----C----S-SCEEEEEEET
T ss_pred cceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec----c----C-CceEEEEecC
Confidence 2345799999999999999999 8999999999 555 3333222 1 1 5678888876
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=3.2e-26 Score=230.44 Aligned_cols=268 Identities=16% Similarity=0.178 Sum_probs=207.2
Q ss_pred cccceeeeccccceeeeCC---CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC
Q 009614 228 LGAMARIIDRHGSATLKPG---DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (531)
Q Consensus 228 ~~~~~~~~~~~~s~~fspd---g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~ 304 (531)
+..+..|.+.+.+++|+|+ |.+|++|+.||.|+||++...... ....+.+|.+.|++++|+|++++|++|+.
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT-----IPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE-----EEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce-----eEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 3356678889999999999 699999999999999999852221 12457889999999999999999999999
Q ss_pred CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
||.|++||+.+++... +..+...+.++.+.+..... ..+.++.++.+.+|+.... +++..+
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~--------------~l~~~~~dg~i~vwd~~~~----~~~~~~ 167 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS--------------CVMTGSWDKTLKFWDTRSS----NPMMVL 167 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE--------------EEEEEETTSEEEEECSSCS----SCSEEE
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCC--------------EEEEccCCCcEEEEECCCC----cEEEEE
Confidence 9999999999887654 44455566666664333222 2345677888999998763 445666
Q ss_pred ecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee---cCCceEEEEEeeCCCCE----EEEEeCCCeEEEEe
Q 009614 385 QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNY----FISGSIDGKVRIWE 457 (531)
Q Consensus 385 ~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~---h~~~V~sv~fsp~d~~~----l~sgs~Dg~I~Iwd 457 (531)
..|. .+.++.+.++ .+++++.++.+++|++.......... +...+.++++.+ +... +++++.||.|++||
T Consensus 168 ~~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~ 244 (368)
T 3mmy_A 168 QLPE-RCYCADVIYP-MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHY 244 (368)
T ss_dssp ECSS-CEEEEEEETT-EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEE
T ss_pred ecCC-CceEEEecCC-eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEe
Confidence 6554 6777777654 88888999999999998765443332 556677777776 5544 99999999999999
Q ss_pred CCCCe----EEEecCCCC------------ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCc
Q 009614 458 VRRCQ----VVDYTDIRE------------IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGK 521 (531)
Q Consensus 458 ~~~~~----~~~~~~~~~------------~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~ 521 (531)
+.... ...+..|.. .|++++|+|++++|++|+.||.|++||+.+++++..+. .+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~ 316 (368)
T 3mmy_A 245 INPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE--------QLDQ 316 (368)
T ss_dssp SSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC--------CCSS
T ss_pred cCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec--------CCCC
Confidence 99863 223455544 79999999999999999999999999999998876543 3456
Q ss_pred eeeeEEEee
Q 009614 522 RITGFQVVK 530 (531)
Q Consensus 522 ~It~l~f~p 530 (531)
.|++++|+|
T Consensus 317 ~v~~~~~s~ 325 (368)
T 3mmy_A 317 PISACCFNH 325 (368)
T ss_dssp CEEEEEECT
T ss_pred CceEEEECC
Confidence 899999987
No 84
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=9.3e-26 Score=235.11 Aligned_cols=277 Identities=19% Similarity=0.374 Sum_probs=214.8
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+|.+.+.. +++++|+++++|+.||.|++|++.+.. ....+.+|.+.|++++|+ +++|++|+.||+|+
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK-------CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC-------EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCc-------EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence 35556555433 577789999999999999999998543 334678999999999997 66999999999999
Q ss_pred EEEcccCccccceecCCCCCeeEEEeec------CCcceeeeecccccc----------------ccccccccCCCceEE
Q 009614 310 VWKVIEHERLDGFDVQDTDPSCLYFTIN------HLSQLIPIDVDKEKI----------------DKTKSLRKSSDLTCV 367 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 367 (531)
+||+.+++.+..+..+...+.++.+... ..+.+..++...... .....+.++.++.+.
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 262 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred EEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEE
Confidence 9999999988888877777766665321 111222222221111 112335566778888
Q ss_pred EeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEE
Q 009614 368 VLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFI 445 (531)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~ 445 (531)
+|+... .+++..+.+|...|.++.| ++ ++++++.|+.|++||+++++++..+. |...+.++.++ +++|+
T Consensus 263 iwd~~~----~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~ 333 (445)
T 2ovr_B 263 VWDPET----ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---DNILV 333 (445)
T ss_dssp EEEGGG----TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---TTEEE
T ss_pred EEECCC----CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---CCEEE
Confidence 887655 3457788899999999999 45 99999999999999999999998886 88889988874 57999
Q ss_pred EEeCCCeEEEEeCCCCeEEE-ecC---CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCc
Q 009614 446 SGSIDGKVRIWEVRRCQVVD-YTD---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGK 521 (531)
Q Consensus 446 sgs~Dg~I~Iwd~~~~~~~~-~~~---~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~ 521 (531)
+|+.||.|++||+.+++.+. +.. |...|++++|+ +++|++|+.||.|++||+.+++++..+.... ...+..
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~ 408 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLE---SGGSGG 408 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECT---TGGGTC
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccc---cCCCCc
Confidence 99999999999999988774 443 78899999995 6899999999999999999999887664321 123457
Q ss_pred eeeeEEEee
Q 009614 522 RITGFQVVK 530 (531)
Q Consensus 522 ~It~l~f~p 530 (531)
.|++++|+|
T Consensus 409 ~v~~~~~s~ 417 (445)
T 2ovr_B 409 VVWRIRASN 417 (445)
T ss_dssp EEEEEEECS
T ss_pred eEEEEEecC
Confidence 899999987
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.4e-27 Score=249.93 Aligned_cols=253 Identities=10% Similarity=0.059 Sum_probs=190.7
Q ss_pred ceeeeccccceeeeCC------CCeEEeeecCCeEEEEeCCCCcccc----cccccceEEcccCCCEEEEEEccCCCEEE
Q 009614 231 MARIIDRHGSATLKPG------DHELTLGQRMRRVRVHPVKKQSREL----SSLYTGQEFLAHEGSILTMKFSLDGQYLA 300 (531)
Q Consensus 231 ~~~~~~~~~s~~fspd------g~~lasgs~dg~I~vwd~~~~~~~~----~~~~~~~~l~~H~~~I~~l~fspdg~~La 300 (531)
+.++...+.+++|+|+ +.+||+|+.||+|+||++....... ........+.+|...|++++|++++ .|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence 3445567788999997 5799999999999999997653210 0111234688999999999999864 899
Q ss_pred EEeCCCcEEEEEcccCcc-ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 301 SGGEDGTVRVWKVIEHER-LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 301 sgs~Dg~I~iWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
+|+.||+|++||+.++.. ...+..+...+.++.+...... ....++++.|+.+.+|+.+....
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g-------------~~~laS~S~D~tvklWD~~~~~~--- 345 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE-------------DTVVSTVAVDGYFYIFNPKDIAT--- 345 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS-------------CCEEEEEETTSEEEEECGGGHHH---
T ss_pred EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC-------------CeEEEEeccCCeEEEEECCCCCc---
Confidence 999999999999987643 2335555555555532211111 02235678899999999876432
Q ss_pred ceeEeecCCC--CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 380 PLHEFQGHSS--EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 380 ~~~~~~~h~~--~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
+..+.+|.. .|.+++|+|++ .|++++.|++|++||++++.++..+ .|...|++|+|+| ++++|++|+.||+|+|
T Consensus 346 -~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~l 423 (524)
T 2j04_B 346 -TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLII 423 (524)
T ss_dssp -HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEEC
T ss_pred -ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEE
Confidence 345556653 58899999998 9999999999999999999887666 5999999999999 9999999999999999
Q ss_pred EeCCCC---------------eE------------------------------EEecCCCCceEEEEEccCCC---EEEE
Q 009614 456 WEVRRC---------------QV------------------------------VDYTDIREIVSAVCYCPDGK---GGIV 487 (531)
Q Consensus 456 wd~~~~---------------~~------------------------------~~~~~~~~~v~~v~~spdg~---~l~s 487 (531)
||+..+ .+ ..+.+|...|++|+|+|+++ +|++
T Consensus 424 wd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAs 503 (524)
T 2j04_B 424 TNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAF 503 (524)
T ss_dssp CBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEE
T ss_pred EechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHh
Confidence 985321 01 11334667899999999964 9999
Q ss_pred EeCCCcEEEEeCCCC
Q 009614 488 GTMTGNCRFYDIKDN 502 (531)
Q Consensus 488 gs~dg~I~iwd~~~~ 502 (531)
|+.+|.|+||++...
T Consensus 504 g~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 504 SNSAGLLTLEYLSLE 518 (524)
T ss_dssp ECTTSEEEEEECSCC
T ss_pred hccCceEEEEEcccc
Confidence 999999999998753
No 86
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.6e-27 Score=264.15 Aligned_cols=293 Identities=11% Similarity=0.061 Sum_probs=201.3
Q ss_pred ceeeeccccceeeeCC-CCeEEeeecCCeEEEEeCCCCcccccccccc------------eEEcccCCCEEEEEEccCCC
Q 009614 231 MARIIDRHGSATLKPG-DHELTLGQRMRRVRVHPVKKQSRELSSLYTG------------QEFLAHEGSILTMKFSLDGQ 297 (531)
Q Consensus 231 ~~~~~~~~~s~~fspd-g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~------------~~l~~H~~~I~~l~fspdg~ 297 (531)
+..|...+.+++|+|+ +..+++|+.||.| +||+........ +... ....+|...|++++|+|+|+
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQS-FIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEE-ECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEE-EecccCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence 3557788899999996 4789999999999 999986542210 0000 01123568899999999999
Q ss_pred EEEEEeCCCcEEEEEcccCccccc--ee---cC-------------CCCCeeEEEeecCC----cceeeeecccc----c
Q 009614 298 YLASGGEDGTVRVWKVIEHERLDG--FD---VQ-------------DTDPSCLYFTINHL----SQLIPIDVDKE----K 351 (531)
Q Consensus 298 ~Lasgs~Dg~I~iWd~~~~~~~~~--~~---~~-------------~~~~~~~~~~~~~~----~~~~~~~~~~~----~ 351 (531)
+||+|+.||+|++||+.+++.+.. +. .+ ...+..+.|.+... ..++....+.. .
T Consensus 225 ~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~ 304 (902)
T 2oaj_A 225 HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS 304 (902)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence 999999999999999998876542 21 11 12344555644211 11111101000 0
Q ss_pred c---------------------------------------------------------ccccccccCCCceEEEeCCccc
Q 009614 352 I---------------------------------------------------------DKTKSLRKSSDLTCVVLPPKVF 374 (531)
Q Consensus 352 ~---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 374 (531)
+ .....+..+.++.+.+|+....
T Consensus 305 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g 384 (902)
T 2oaj_A 305 LTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSG 384 (902)
T ss_dssp EEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTC
T ss_pred EEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCC
Confidence 0 0001122233566777764221
Q ss_pred ccc-------------------------------------CcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEEC
Q 009614 375 RLL-------------------------------------EKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQV 416 (531)
Q Consensus 375 ~~~-------------------------------------~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl 416 (531)
... ......+.+|...+..++|+|++ +|++|+.|++|++||+
T Consensus 385 ~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~ 464 (902)
T 2oaj_A 385 IFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDA 464 (902)
T ss_dssp CEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEES
T ss_pred CcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEEC
Confidence 100 00112245667777778888988 9999999999999999
Q ss_pred CCCeEE-----EE-e------ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe----------------------
Q 009614 417 GIDRCL-----RV-F------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ---------------------- 462 (531)
Q Consensus 417 ~~~~~l-----~~-~------~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~---------------------- 462 (531)
.++... .. + .|...|++|+|+| ++++||+|+.||+|+|||+.+++
T Consensus 465 ~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (902)
T 2oaj_A 465 SHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSL 543 (902)
T ss_dssp SCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCG
T ss_pred CCccccCCceEEeechhhcCCCCCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccc
Confidence 877421 11 1 5788999999999 99999999999999999997652
Q ss_pred ------------------------EEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccC
Q 009614 463 ------------------------VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKL 518 (531)
Q Consensus 463 ------------------------~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~ 518 (531)
...+.+|...|++|+|+||| +||+|+.||+|+|||+.++.++....+ ......
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~--~~~~~g 620 (902)
T 2oaj_A 544 NNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENI--REISGA 620 (902)
T ss_dssp GGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEG--GGTCSS
T ss_pred cCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeeh--hHhccc
Confidence 23467799999999999999 999999999999999998888754332 111125
Q ss_pred CCceeeeEEEe
Q 009614 519 PGKRITGFQVV 529 (531)
Q Consensus 519 ~~~~It~l~f~ 529 (531)
|...|++|+|+
T Consensus 621 h~~~V~sv~Fs 631 (902)
T 2oaj_A 621 QSACVTCIEFV 631 (902)
T ss_dssp CCCCEEEEEEE
T ss_pred cccceEEEEEE
Confidence 67889999998
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=5.5e-27 Score=239.11 Aligned_cols=242 Identities=13% Similarity=0.078 Sum_probs=188.1
Q ss_pred eeccccceeeeC-CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 009614 234 IIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (531)
Q Consensus 234 ~~~~~~s~~fsp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd 312 (531)
|...+.+++|+| ++.++++|+.|+.|++|++..... .......+|...|.+++|+|++++|++|+.||.|++||
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI-----QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE-----EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce-----EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 556778899999 789999999999999999984221 11111234568899999999999999999999999999
Q ss_pred cccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCee
Q 009614 313 VIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (531)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~ 392 (531)
+ +++.+..+..+...+.++.+.+.... ..+.++.++.+.+|+..........+..+ +|...|.
T Consensus 192 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~---------------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~ 254 (383)
T 3ei3_B 192 L-DGHEIFKEKLHKAKVTHAEFNPRCDW---------------LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVN 254 (383)
T ss_dssp T-TSCEEEEEECSSSCEEEEEECSSCTT---------------EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEE
T ss_pred C-CCCEEEEeccCCCcEEEEEECCCCCC---------------EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceE
Confidence 9 56667777777777777777655432 22455678889999887655444455555 6999999
Q ss_pred EEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEee-c-------C----------CceEEEEEeeCCCCEEEEEeCCCe
Q 009614 393 DLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVFS-H-------N----------NYVTSVAFNPVDDNYFISGSIDGK 452 (531)
Q Consensus 393 ~l~~sp-~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h-------~----------~~V~sv~fsp~d~~~l~sgs~Dg~ 452 (531)
+++|+| ++ +|++++.|+.|++||+++++.+..+. | . ..+..++|+| ++++ +|+.|+.
T Consensus 255 ~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~ 331 (383)
T 3ei3_B 255 AAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRT 331 (383)
T ss_dssp EEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCC
T ss_pred EEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC-Cccc--ccCCCCe
Confidence 999999 88 99999999999999999877655543 2 2 3344466666 5555 6778999
Q ss_pred EEEEeCCCCeEEE-ecC--CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 453 VRIWEVRRCQVVD-YTD--IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 453 I~Iwd~~~~~~~~-~~~--~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
|+|||+.+++.+. +.. +...+..++|+|++++|++|+ ||.|+|||+++
T Consensus 332 i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 332 IDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999999998774 443 567788889999999999997 99999999875
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.9e-27 Score=241.73 Aligned_cols=247 Identities=11% Similarity=0.082 Sum_probs=180.6
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+..|...+.+++|+|++++|++|+.|+.|++|++.... .......+.+|...|++++|+|++++|++|+.|+.|+
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG----TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC----ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 455677888899999999999999999999999998654 1223345778999999999999999999999999999
Q ss_pred EEEcccCcc---ccceec-CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccc---------
Q 009614 310 VWKVIEHER---LDGFDV-QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL--------- 376 (531)
Q Consensus 310 iWd~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 376 (531)
+||+.+++. ...+.. +...+.++.+.++.. ..+.++.++.+.+|+......
T Consensus 126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~----------------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 189 (377)
T 3dwl_C 126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV----------------LLAAGCADRKAYVLSAYVRDVDAKPEASVW 189 (377)
T ss_dssp ECCC-----CCCCEEECSSCCSCEEEEEECTTSS----------------EEEEEESSSCEEEEEECCSSCC-CCCSCSS
T ss_pred EEEECCcccceeeeEeecccCCCeEEEEEcCCCC----------------EEEEEeCCCEEEEEEEEecccCCCcccccc
Confidence 999988763 445554 555566666655331 234556677788887642221
Q ss_pred -----cCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeE----EEEee-cCCceEEEEEeeCCCCEEE
Q 009614 377 -----LEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRC----LRVFS-HNNYVTSVAFNPVDDNYFI 445 (531)
Q Consensus 377 -----~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~----l~~~~-h~~~V~sv~fsp~d~~~l~ 445 (531)
..+++..+ +|...|.+++|+|++ +|++++.|++|++||+.++++ +..+. |...|++++|+| ++.+|+
T Consensus 190 ~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 267 (377)
T 3dwl_C 190 GSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVA 267 (377)
T ss_dssp CSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-TTEEEE
T ss_pred ccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-CCCEEE
Confidence 12345555 899999999999999 999999999999999999876 55554 889999999999 899999
Q ss_pred EEeCCCeEEEEeCCCCe---------------------------------------EE---E-----------ecCCCCc
Q 009614 446 SGSIDGKVRIWEVRRCQ---------------------------------------VV---D-----------YTDIREI 472 (531)
Q Consensus 446 sgs~Dg~I~Iwd~~~~~---------------------------------------~~---~-----------~~~~~~~ 472 (531)
+|+.++.+ +|+..... .. . ...|...
T Consensus 268 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~ 346 (377)
T 3dwl_C 268 AGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNM 346 (377)
T ss_dssp EESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSC
T ss_pred EEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccce
Confidence 98876665 66654211 00 0 1128889
Q ss_pred eEEEEEccCC-C---EEEEEeCCCcEEEEeC
Q 009614 473 VSAVCYCPDG-K---GGIVGTMTGNCRFYDI 499 (531)
Q Consensus 473 v~~v~~spdg-~---~l~sgs~dg~I~iwd~ 499 (531)
|+++++.+.. . .|++|+.||.|+|||+
T Consensus 347 i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 347 IATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred eEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 9999977644 3 6999999999999985
No 89
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.3e-26 Score=260.18 Aligned_cols=227 Identities=12% Similarity=0.116 Sum_probs=181.5
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
..+|...+.+++|+|++.+||+|+.||.|+||+....... ....|..+|++|+|+| |++|++++.|++|+|
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~--------~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~l 83 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV--------IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYV 83 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE--------EECSSCCCEEEEEEET-TTEEEEEETTCEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE--------EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEE
Confidence 3456778889999999999999999999999997643221 1235788999999999 889999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
||+.+++.+ ..+. |.+.
T Consensus 84 Wd~~~~~~~--------------------------------------------------------------~~~~-~~~~ 100 (902)
T 2oaj_A 84 LSLYSQKVL--------------------------------------------------------------TTVF-VPGK 100 (902)
T ss_dssp EETTTCSEE--------------------------------------------------------------EEEE-CSSC
T ss_pred EECCCCcEE--------------------------------------------------------------EEEc-CCCC
Confidence 999776432 2222 5578
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEE-----------Ee-ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEe
Q 009614 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLR-----------VF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~-----------~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd 457 (531)
|++++|+|++ +|++|+.||+|++||+.++++.. .+ .|...|++|+|+|.++.+|++|+.||.| |||
T Consensus 101 V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd 179 (902)
T 2oaj_A 101 ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS 179 (902)
T ss_dssp EEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence 9999999999 99999999999999999887641 11 2788999999999546799999999999 999
Q ss_pred CCCCeEEE-ecCC------------------CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee-eccccc
Q 009614 458 VRRCQVVD-YTDI------------------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC-LQGKKK 517 (531)
Q Consensus 458 ~~~~~~~~-~~~~------------------~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~-~~~~kk 517 (531)
+++++.+. +..| ...|++++|+|+|++|++|+.||.|+|||+.+++++....+. ..++..
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~ 259 (902)
T 2oaj_A 180 LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVP 259 (902)
T ss_dssp TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSC
T ss_pred CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCC
Confidence 99998774 3333 467999999999999999999999999999999887542211 011110
Q ss_pred ---------CCCceeeeEEEee
Q 009614 518 ---------LPGKRITGFQVVK 530 (531)
Q Consensus 518 ---------~~~~~It~l~f~p 530 (531)
.+...|++++|+|
T Consensus 260 ~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 260 QPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp CTTCCCCCSSCCCEEEEEEEEE
T ss_pred CCcCCCCCccccCCeeEEEEEe
Confidence 1235799999964
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=4e-26 Score=234.63 Aligned_cols=225 Identities=20% Similarity=0.280 Sum_probs=183.1
Q ss_pred ceeeeCCCCeEE-eeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEcccCc
Q 009614 240 SATLKPGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRVWKVIEHE 317 (531)
Q Consensus 240 s~~fspdg~~la-sgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~Lasgs~Dg~I~iWd~~~~~ 317 (531)
.++++|+...++ +|+.+|.|+||++....... .....+.+|.+.|++++|+| ++++|++|+.||+|+||++.++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVD---KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECC---TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCC---CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 477888776554 57899999999997543321 12234789999999999999 99999999999999999997764
Q ss_pred cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEc
Q 009614 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (531)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~s 397 (531)
..... ..++..+.+|...|.+++|+
T Consensus 116 ~~~~~-------------------------------------------------------~~~~~~~~~h~~~v~~~~~~ 140 (402)
T 2aq5_A 116 LVLPL-------------------------------------------------------REPVITLEGHTKRVGIVAWH 140 (402)
T ss_dssp CSSCB-------------------------------------------------------CSCSEEEECCSSCEEEEEEC
T ss_pred Ccccc-------------------------------------------------------CCceEEecCCCCeEEEEEEC
Confidence 32110 12456778999999999999
Q ss_pred CCC--eEEEEeCCCcEEEEECCCCeEEEEe--e-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-e-cCCC
Q 009614 398 KNG--FLLSSSADKTVRLWQVGIDRCLRVF--S-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-Y-TDIR 470 (531)
Q Consensus 398 p~~--~l~s~s~Dg~V~lwdl~~~~~l~~~--~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~-~~~~ 470 (531)
|++ +|++++.|++|++||+.+++++..+ . |...|++++|+| ++++|++++.||.|+|||+++++.+. + ..|.
T Consensus 141 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 219 (402)
T 2aq5_A 141 PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE 219 (402)
T ss_dssp SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCC
Confidence 996 8999999999999999999999888 3 899999999999 99999999999999999999998875 4 5676
Q ss_pred Cc-eEEEEEccCCCEEEEE---eCCCcEEEEeCCCCeE-EEEeeeeecccccCCCceeeeEEEee
Q 009614 471 EI-VSAVCYCPDGKGGIVG---TMTGNCRFYDIKDNQL-YQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 471 ~~-v~~v~~spdg~~l~sg---s~dg~I~iwd~~~~~l-~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.. +..++|+|++++|++| +.|+.|++||+.+++. +.... ..+...|+.++|+|
T Consensus 220 ~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 220 GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE-------LDTSSGVLLPFFDP 277 (402)
T ss_dssp SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-------CCCCSSCEEEEEET
T ss_pred CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe-------ccCCCceeEEEEcC
Confidence 65 8999999999999999 7899999999988664 22211 12234577777775
No 91
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=1.5e-25 Score=233.11 Aligned_cols=247 Identities=20% Similarity=0.359 Sum_probs=199.9
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcccc
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLD 320 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~ 320 (531)
.++.+++.++++|+.||.|++||..+.. ....+.+|.+.|++++| ++++|++|+.||+|++||+.+++.+.
T Consensus 137 ~~~~~d~~~l~~g~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDNTIKIWDKNTLE-------CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp EEEECCSSEEEEEESSSCEEEEESSSCC-------EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred EEEEECCCEEEEEeCCCeEEEEeCCCCe-------EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 3566699999999999999999987543 33568899999999999 78899999999999999999998877
Q ss_pred ceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC
Q 009614 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG 400 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~ 400 (531)
.+..+...+.++.+. . ...+.++.++.+.+|+....... .....+.+|...|.+++|. ..
T Consensus 208 ~~~~h~~~v~~l~~~-------------~-----~~l~s~s~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~-~~ 267 (435)
T 1p22_A 208 TLIHHCEAVLHLRFN-------------N-----GMMVTCSKDRSIAVWDMASPTDI-TLRRVLVGHRAAVNVVDFD-DK 267 (435)
T ss_dssp EECCCCSCEEEEECC-------------T-----TEEEEEETTSCEEEEECSSSSCC-EEEEEECCCSSCEEEEEEE-TT
T ss_pred EEcCCCCcEEEEEEc-------------C-----CEEEEeeCCCcEEEEeCCCCCCc-eeeeEecCCCCcEEEEEeC-CC
Confidence 776665555444432 1 13456777888999987653321 1236678899999999993 22
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEE
Q 009614 401 FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCY 478 (531)
Q Consensus 401 ~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~ 478 (531)
+|++|+.|+.|++||+++++++..+. |...|.+++|+ ++++++|+.||.|++||+++++.+ .+.+|...|++++|
T Consensus 268 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 268 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 344 (435)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe
Confidence 99999999999999999999998886 89999999994 579999999999999999998877 47789999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEeCCCCe---------EEEEeeeeecccccCCCceeeeEEEe
Q 009614 479 CPDGKGGIVGTMTGNCRFYDIKDNQ---------LYQQNQICLQGKKKLPGKRITGFQVV 529 (531)
Q Consensus 479 spdg~~l~sgs~dg~I~iwd~~~~~---------l~~~~~~~~~~~kk~~~~~It~l~f~ 529 (531)
++.+|++|+.||.|++||+.+++ .+..+ ..+...|++++|.
T Consensus 345 --~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--------~~h~~~v~~l~~~ 394 (435)
T 1p22_A 345 --DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL--------VEHSGRVFRLQFD 394 (435)
T ss_dssp --CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE--------CCCSSCCCCEEEC
T ss_pred --cCCEEEEEeCCCcEEEEECCCCCCccccccchheeec--------cCCCCCeEEEEeC
Confidence 78999999999999999997655 33322 2344677777764
No 92
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=3.2e-26 Score=231.83 Aligned_cols=261 Identities=10% Similarity=0.073 Sum_probs=187.7
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEE-EEEeCCCcEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVR 309 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-asgs~Dg~I~ 309 (531)
...|...+.+++|+|||++||+|+.++ ++||+....... ...+...+..+++.++++++ ++++.|++|+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI---------MSQEMRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE---------EEEECSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee---------eeeecCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 455778899999999999999998775 789997743321 12223358888999988877 5677889999
Q ss_pred EEEcccCccccceecCCCCCeeEEEeecC-----Ccceeeeecccc-ccc--------------cccccc-cCCCceEEE
Q 009614 310 VWKVIEHERLDGFDVQDTDPSCLYFTINH-----LSQLIPIDVDKE-KID--------------KTKSLR-KSSDLTCVV 368 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~--------------~~~~~~-~~~~~~~~~ 368 (531)
+||+.+++.+..+... ..+..+.+.... ...+..++.... ... ....+. +..++.+.+
T Consensus 85 iWd~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 85 IWDDVKKQDVSRIKVD-APVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEETTTTEEEEEEECS-SCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred EEECCCCcEEEEEECC-CceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 9999999888777643 334444433221 111222222221 000 011112 577888999
Q ss_pred eCCccccc-----------cCcc-eeEeecCCCCeeEEEEcCCC-eEEEEeCCCc-EEEEECCCCeEEEEee---cCCce
Q 009614 369 LPPKVFRL-----------LEKP-LHEFQGHSSEVLDLSWSKNG-FLLSSSADKT-VRLWQVGIDRCLRVFS---HNNYV 431 (531)
Q Consensus 369 ~~~~~~~~-----------~~~~-~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~-V~lwdl~~~~~l~~~~---h~~~V 431 (531)
|+...... ...+ +..+.+|.+.|.+++|+|++ +|++|+.|++ |++||+++++++..+. |...|
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v 243 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADV 243 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCE
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcE
Confidence 98765320 0123 67889999999999999999 9999999998 9999999999999997 89999
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE---Ee---------------------cCCCCceEEEEEccCCCEEEE
Q 009614 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV---DY---------------------TDIREIVSAVCYCPDGKGGIV 487 (531)
Q Consensus 432 ~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~---~~---------------------~~~~~~v~~v~~spdg~~l~s 487 (531)
++++|+| ++++|++++.|++|+|||+...... .+ .........++|+|||++|++
T Consensus 244 ~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~ 322 (355)
T 3vu4_A 244 VDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVV 322 (355)
T ss_dssp EEEEECT-TSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEE
T ss_pred EEEEECC-CCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEE
Confidence 9999999 9999999999999999999765311 00 011223467999999999999
Q ss_pred EeCCCcEEEEeCCCCe
Q 009614 488 GTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 488 gs~dg~I~iwd~~~~~ 503 (531)
++.||.+++|++..+.
T Consensus 323 ~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 323 WPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTTTEEEEEEEEEET
T ss_pred EeCCCeEEEEEEEcCC
Confidence 9999999999986544
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=1.3e-26 Score=230.82 Aligned_cols=231 Identities=16% Similarity=0.177 Sum_probs=172.6
Q ss_pred EEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc--cccceecCCCCCeeEEEeecCCcceeeeecccccccccc
Q 009614 279 EFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (531)
Q Consensus 279 ~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (531)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++. .+..+..+...+.++.|.+... ...
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~--------------~~~ 73 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMY--------------GNI 73 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGG--------------SSC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCC--------------CCE
Confidence 467899999999999999999999999999999998764 3455666666666666643211 123
Q ss_pred ccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeEE---EEe-ecCC
Q 009614 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRCL---RVF-SHNN 429 (531)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~--~-~l~s~s~Dg~V~lwdl~~~~~l---~~~-~h~~ 429 (531)
.++++.|+.+.+|+..... ...+..+.+|...|.+++|+|+ + +|++|+.|++|++||++.+... ..+ .|..
T Consensus 74 l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGT--WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp EEEEETTSCEEEECCSSSC--CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred EEEEECCCEEEEEECCCCc--ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 3566788899999876422 1345677899999999999997 6 8999999999999999876422 222 3888
Q ss_pred ceEEEEEeeCC-----------------CCEEEEEeCCCeEEEEeCCCC---eEE-EecCCCCceEEEEEccCC----CE
Q 009614 430 YVTSVAFNPVD-----------------DNYFISGSIDGKVRIWEVRRC---QVV-DYTDIREIVSAVCYCPDG----KG 484 (531)
Q Consensus 430 ~V~sv~fsp~d-----------------~~~l~sgs~Dg~I~Iwd~~~~---~~~-~~~~~~~~v~~v~~spdg----~~ 484 (531)
.|.+++|+| + +.+|++|+.|++|+|||+... +.+ .+.+|...|.+++|+|++ ++
T Consensus 152 ~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 152 GCNAVSWAP-AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CBCCCEECC-CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CcceEEEcc-ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 999999999 5 468999999999999999764 233 477899999999999987 88
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 485 GIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 485 l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
|++|+.||+|+||++.+..........+ ..+...|.+++|+|
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~----~~~~~~v~~v~~sp 272 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLL----HKFNDVVWHVSWSI 272 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEE----EECSSCEEEEEECT
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhh----hcCCCcEEEEEEcC
Confidence 9999999999999997631100000001 11246788999887
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1.6e-25 Score=241.95 Aligned_cols=266 Identities=18% Similarity=0.266 Sum_probs=213.4
Q ss_pred ceeeecc-ccceeeeC--CCCeEEeeecCCeEEEEeCCCCccc-ccccccceEEcccCCCEEEEEEccCCCEEEEEeCC-
Q 009614 231 MARIIDR-HGSATLKP--GDHELTLGQRMRRVRVHPVKKQSRE-LSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED- 305 (531)
Q Consensus 231 ~~~~~~~-~~s~~fsp--dg~~lasgs~dg~I~vwd~~~~~~~-~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D- 305 (531)
+..|... +.+++|+| ++++|++|+.||.|+||++...... .........+.+|...|.+++|+|++++|++++.+
T Consensus 59 ~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 138 (615)
T 1pgu_A 59 FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 138 (615)
T ss_dssp ECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS
T ss_pred EecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC
Confidence 4456677 88999999 9999999999999999999643100 00112334678899999999999999999999988
Q ss_pred ---CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCccee
Q 009614 306 ---GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (531)
Q Consensus 306 ---g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (531)
+.|++|| .++....+..+...+.++.+.+.... ..+.++.++.+.+|+.... +.+.
T Consensus 139 ~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~---------------~l~~~~~d~~v~vwd~~~~----~~~~ 197 (615)
T 1pgu_A 139 DNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPM---------------RSMTVGDDGSVVFYQGPPF----KFSA 197 (615)
T ss_dssp SCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSC---------------EEEEEETTTEEEEEETTTB----EEEE
T ss_pred CCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCc---------------EEEEEeCCCcEEEEeCCCc----ceee
Confidence 6888888 55666667667777777777655432 2345567788999987653 4567
Q ss_pred EeecCCC---CeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEe-----ecCCceEEEEEeeCCCCEEEEEeCCCe
Q 009614 383 EFQGHSS---EVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVF-----SHNNYVTSVAFNPVDDNYFISGSIDGK 452 (531)
Q Consensus 383 ~~~~h~~---~I~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~-----~h~~~V~sv~fsp~d~~~l~sgs~Dg~ 452 (531)
.+.+|.. .|.+++|+|+ + +|++++.|+.|++||+.+++.+..+ .|...|++++|+ ++.+|++++.|+.
T Consensus 198 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~ 275 (615)
T 1pgu_A 198 SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADAT 275 (615)
T ss_dssp EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSE
T ss_pred eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCc
Confidence 7888999 9999999999 8 9999999999999999999999998 799999999999 7899999999999
Q ss_pred EEEEeCCCCeEEE-ecCC----CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEE
Q 009614 453 VRIWEVRRCQVVD-YTDI----REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQ 527 (531)
Q Consensus 453 I~Iwd~~~~~~~~-~~~~----~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~ 527 (531)
|++||+.+++.+. +..+ ...+.++.|. ++.++++++.||.|++||+.+++++..+. .+...|++++
T Consensus 276 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~--------~~~~~v~~~~ 346 (615)
T 1pgu_A 276 IRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTIS--------GHNKGITALT 346 (615)
T ss_dssp EEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEEC--------CCSSCEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEe--------CCCCCEEEEE
Confidence 9999999998775 3333 3678888885 89999999999999999999877765443 2345667766
Q ss_pred E
Q 009614 528 V 528 (531)
Q Consensus 528 f 528 (531)
|
T Consensus 347 ~ 347 (615)
T 1pgu_A 347 V 347 (615)
T ss_dssp T
T ss_pred e
Confidence 6
No 95
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=1.9e-26 Score=239.94 Aligned_cols=251 Identities=12% Similarity=0.087 Sum_probs=185.9
Q ss_pred ceeeeccccceeeeC-CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 231 MARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 231 ~~~~~~~~~s~~fsp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
+.+|...|.+++|+| ++.+|++|+.||+|+|||+....... ......+...+.+++|+|++++|++|+.||.|+
T Consensus 160 ~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 160 GIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRV-----FASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp CCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEE-----EECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeE-----EeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 345778899999998 68899999999999999987533211 111223455688999999999999999999999
Q ss_pred EEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 310 VWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
+||+. ++.+..+..+...+.++.|.+..... .+.++.++.+.+|+.+...... .+....+|..
T Consensus 235 ~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~---------------~~s~s~d~~v~iwd~~~~~~~~-~~~~~~~h~~ 297 (435)
T 4e54_B 235 LLNMD-GKELWNLRMHKKKVTHVALNPCCDWF---------------LATASVDQTVKIWDLRQVRGKA-SFLYSLPHRH 297 (435)
T ss_dssp EEESS-SCBCCCSBCCSSCEEEEEECTTCSSE---------------EEEEETTSBCCEEETTTCCSSS-CCSBCCBCSS
T ss_pred eeccC-cceeEEEecccceEEeeeecCCCceE---------------EEEecCcceeeEEecccccccc-eEEEeeeccc
Confidence 99985 45566677777777777766544322 2345667778888876544322 2334467999
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCC------ceEEEEEeeCCCCEEEEEe------------C
Q 009614 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNN------YVTSVAFNPVDDNYFISGS------------I 449 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~------~V~sv~fsp~d~~~l~sgs------------~ 449 (531)
.|++++|+|++ +|++++.|++|+|||+.++.+...+. |.. .+..+.|+| ++.++++++ .
T Consensus 298 ~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~ 376 (435)
T 4e54_B 298 PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHP-RYNLIVVGRYPDPNFKSCTPYE 376 (435)
T ss_dssp CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECS-SSSCEEEECCCCTTSCCSSTTC
T ss_pred cccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcC-CCCEEEEEEcCCCCeEEEEecC
Confidence 99999999999 99999999999999999988766653 321 234567777 666666654 2
Q ss_pred CCeEEEEeCCCCeEEE--ecCCCCceEEE-EEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 450 DGKVRIWEVRRCQVVD--YTDIREIVSAV-CYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 450 Dg~I~Iwd~~~~~~~~--~~~~~~~v~~v-~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
++.|++||..+++++. ..+|...|.++ +|+|+|++|++|+ |+.|+||++++++..
T Consensus 377 ~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 377 LRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 3579999999998874 34677888887 6999999999876 889999999988753
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=226.19 Aligned_cols=234 Identities=18% Similarity=0.203 Sum_probs=184.8
Q ss_pred eEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc--cCccccceecCCCCCeeEEEeecCCcceeeeeccccccccc
Q 009614 278 QEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI--EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (531)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (531)
+.+.+|.+.|++++|+|++++||+|+.||.|+||++. +++....+..+...+.++.|.+.... .
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--------------~ 70 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG--------------T 70 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC--------------S
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC--------------C
Confidence 4578999999999999999999999999999999998 55566666666666777776544211 1
Q ss_pred cccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeE---EEEeecCC
Q 009614 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRC---LRVFSHNN 429 (531)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~--~-~l~s~s~Dg~V~lwdl~~~~~---l~~~~h~~ 429 (531)
..+.++.++.+.+|+..... ...+..+.+|...|.+++|+|+ + +|++++.|+.|++||+.++.. .....|..
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp EEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred EEEEeccCCEEEEEEcCCCc--eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 23456677888888766532 1246777889999999999998 7 999999999999999988733 23335899
Q ss_pred ceEEEEEeeC------------CCCEEEEEeCCCeEEEEeCCCCe----EE-EecCCCCceEEEEEccC---CCEEEEEe
Q 009614 430 YVTSVAFNPV------------DDNYFISGSIDGKVRIWEVRRCQ----VV-DYTDIREIVSAVCYCPD---GKGGIVGT 489 (531)
Q Consensus 430 ~V~sv~fsp~------------d~~~l~sgs~Dg~I~Iwd~~~~~----~~-~~~~~~~~v~~v~~spd---g~~l~sgs 489 (531)
.|++++|+|. ++.+|++|+.||.|++||++++. +. .+..|...|++++|+|+ +++|++++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 9999999995 58999999999999999998753 22 47789999999999999 89999999
Q ss_pred CCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 490 MTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 490 ~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.||.|+|||+.++......... ....+...|++++|+|
T Consensus 229 ~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~ 266 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQGPWKKTLL---KEEKFPDVLWRASWSL 266 (379)
T ss_dssp TTSCEEEEEESSTTSCCEEEES---SSSCCSSCEEEEEECS
T ss_pred CCCEEEEEeCCCCCccceeeee---ccccCCCcEEEEEEcC
Confidence 9999999999987532221111 1233557899999987
No 97
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=1.1e-25 Score=228.96 Aligned_cols=264 Identities=14% Similarity=0.137 Sum_probs=190.5
Q ss_pred cccceeeeCCCCeEEeeecC-------CeEEEEeCCCCccccc-ccc--cceEEcccCCCEEEEEEccCCCEEEEE----
Q 009614 237 RHGSATLKPGDHELTLGQRM-------RRVRVHPVKKQSRELS-SLY--TGQEFLAHEGSILTMKFSLDGQYLASG---- 302 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~d-------g~I~vwd~~~~~~~~~-~~~--~~~~l~~H~~~I~~l~fspdg~~Lasg---- 302 (531)
++.+++|+||+++|++|+.+ +.|++|++........ .+. ....+.+|...|.+++++ ++.+++|
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~ 93 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNEN 93 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCC
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCC
Confidence 57889999999999998753 3699999875543211 111 112467888899888775 5566665
Q ss_pred -------eCCCcEEEEEcccCcccccee---------cCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceE
Q 009614 303 -------GEDGTVRVWKVIEHERLDGFD---------VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (531)
Q Consensus 303 -------s~Dg~I~iWd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (531)
+.|+.+++|++.+........ .....+.++.|+++....+ ..+++.++.+
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la--------------~as~~~d~~i 159 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAA--------------IASSKVPAIM 159 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEE--------------EEESCSSCEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEE--------------EEECCCCCEE
Confidence 457889999987654321110 0111123344444332111 1245567889
Q ss_pred EEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe---ecCCceEEEEEeeCCCC
Q 009614 367 VVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF---SHNNYVTSVAFNPVDDN 442 (531)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~---~h~~~V~sv~fsp~d~~ 442 (531)
.+|+..... .+..+. |.+.|.+++|+|+| +|++++ ++.+++|+..+++.+... .|...|.+++|+| ++.
T Consensus 160 ~iwd~~~~~----~~~~~~-~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp-dg~ 232 (365)
T 4h5i_A 160 RIIDPSDLT----EKFEIE-TRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIA-DDT 232 (365)
T ss_dssp EEEETTTTE----EEEEEE-CSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEE-TTE
T ss_pred EEeECCCCc----EEEEeC-CCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcC-CCC
Confidence 999887643 344444 77889999999999 777777 556777777777665443 3888999999999 999
Q ss_pred EEEEEeCCC----eEEEEeCCCCeEE-----EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeec
Q 009614 443 YFISGSIDG----KVRIWEVRRCQVV-----DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQ 513 (531)
Q Consensus 443 ~l~sgs~Dg----~I~Iwd~~~~~~~-----~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~ 513 (531)
++++++.|+ .+++|++...... .+.+|...|++++|+|||++||+|+.||+|+|||+.+++++..+
T Consensus 233 ~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~----- 307 (365)
T 4h5i_A 233 VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF----- 307 (365)
T ss_dssp EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE-----
T ss_pred EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe-----
Confidence 999999887 6899998876532 46788999999999999999999999999999999999987653
Q ss_pred ccccCCCceeeeEEEee
Q 009614 514 GKKKLPGKRITGFQVVK 530 (531)
Q Consensus 514 ~~kk~~~~~It~l~f~p 530 (531)
.+.|...|++++|+|
T Consensus 308 --~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 308 --KQAHSFAITEVTISP 322 (365)
T ss_dssp --TTSSSSCEEEEEECT
T ss_pred --cCcccCCEEEEEECC
Confidence 234567899999998
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=7.6e-26 Score=234.93 Aligned_cols=246 Identities=13% Similarity=0.244 Sum_probs=186.9
Q ss_pred ccccceeeeCCC--CeEEeeecCCeEEEEeCCCCccccc------------------cc--------------ccceE-E
Q 009614 236 DRHGSATLKPGD--HELTLGQRMRRVRVHPVKKQSRELS------------------SL--------------YTGQE-F 280 (531)
Q Consensus 236 ~~~~s~~fspdg--~~lasgs~dg~I~vwd~~~~~~~~~------------------~~--------------~~~~~-l 280 (531)
..+.+++|+|++ .++++++.|+.|++|++........ .+ ..... .
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 678889999998 7999999999999999875332100 00 00012 3
Q ss_pred cccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC-cccc-------ceecCCCCCeeEEEeecCCcceeeeecccccc
Q 009614 281 LAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH-ERLD-------GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKI 352 (531)
Q Consensus 281 ~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (531)
.+|...|++++|+|++++|++| .||.|++||+.+. .... .+..+...+.++.|.+....
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~------------ 240 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN------------ 240 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT------------
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc------------
Confidence 6899999999999999999998 7999999999843 3333 23344555566666554322
Q ss_pred ccccccccCCCceEEEeCCccccccCcceeEeecCCC------------CeeEEEEcCCC-eEEEEeCCCcEEEEECCC-
Q 009614 353 DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS------------EVLDLSWSKNG-FLLSSSADKTVRLWQVGI- 418 (531)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~- 418 (531)
..+.++.++.+.+|+.+........+..+.+|.. .|.+++|+|++ +|++++. +.|++||+++
T Consensus 241 ---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 241 ---TFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME 316 (447)
T ss_dssp ---EEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC
T ss_pred ---EEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC
Confidence 2345667888999998776544444677788876 99999999999 8888888 9999999997
Q ss_pred CeEEEEee-cCCc---------------eEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecC--------------
Q 009614 419 DRCLRVFS-HNNY---------------VTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD-------------- 468 (531)
Q Consensus 419 ~~~l~~~~-h~~~---------------V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~-------------- 468 (531)
++++..+. |... +..++|+| ++.+|++|+.||.|+|||+.+++.+.+..
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (447)
T 3dw8_B 317 NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPR 395 (447)
T ss_dssp SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCC
T ss_pred ccccceeeccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCc
Confidence 88887776 4321 33499999 99999999999999999999988775433
Q ss_pred -------------------CCCceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 469 -------------------IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 469 -------------------~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
+...|..++|+|++++|++++.++ +++|..+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 396 KVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 345688999999999999998776 8888754
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=5.6e-25 Score=246.25 Aligned_cols=246 Identities=18% Similarity=0.288 Sum_probs=201.1
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+..|...+.+++|+|++++|++|+.||.|+||++.++. ....+.+|.+.|++++|+|++++|++++.||+|++
T Consensus 51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 123 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE-------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (814)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-------EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE
Confidence 44566778889999999999999999999999998543 33467889999999999999999999999999999
Q ss_pred EEcccC-ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec-CC
Q 009614 311 WKVIEH-ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-HS 388 (531)
Q Consensus 311 Wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~ 388 (531)
|++.++ .....+..+...+.++.|.+... ...+.++.++.+.+|+.... .+...+.. |.
T Consensus 124 w~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---------------~~l~~~~~dg~v~vwd~~~~----~~~~~~~~~~~ 184 (814)
T 3mkq_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDP---------------STFASGCLDRTVKVWSLGQS----TPNFTLTTGQE 184 (814)
T ss_dssp EEGGGTSEEEEEEECCSSCEEEEEEETTEE---------------EEEEEEETTSEEEEEETTCS----SCSEEEECCCT
T ss_pred EECCCCceEEEEEcCCCCcEEEEEEEcCCC---------------CEEEEEeCCCeEEEEECCCC----cceeEEecCCC
Confidence 999887 55556666666666766665221 12345667788888887542 23444444 44
Q ss_pred CCeeEEEEcC--CC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE
Q 009614 389 SEVLDLSWSK--NG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (531)
Q Consensus 389 ~~I~~l~~sp--~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~ 464 (531)
..+.+++|+| ++ +|++++.|+.|++||+.+++++..+. |...|++++|+| ++.+|++++.||.|++||+.+++.+
T Consensus 185 ~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 8999999999 77 99999999999999999999998886 899999999999 9999999999999999999998877
Q ss_pred -EecCCCCceEEEEEccCCCE-EEEEeCCCcEEEEeCCCCe
Q 009614 465 -DYTDIREIVSAVCYCPDGKG-GIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 465 -~~~~~~~~v~~v~~spdg~~-l~sgs~dg~I~iwd~~~~~ 503 (531)
.+..+...+.+++|+|+|.. +++++.++.+.+|++..+.
T Consensus 264 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 264 KTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp EEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred EEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 47778889999999999873 2444557779999986543
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=3.6e-26 Score=267.89 Aligned_cols=278 Identities=21% Similarity=0.237 Sum_probs=222.6
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCccccc------------------------------ccccceEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS------------------------------SLYTGQEF 280 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~------------------------------~~~~~~~l 280 (531)
+..|...+.+++|+|++.++++++.||.|++|++........ ........
T Consensus 878 ~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1249)
T 3sfz_A 878 CRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQID 957 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEE
T ss_pred cCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEE
Confidence 445667788899999999999999999999999764211100 00001112
Q ss_pred cccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeecccccccccccccc
Q 009614 281 LAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRK 360 (531)
Q Consensus 281 ~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (531)
..+...|.+++|+|+++++++|+.||.|++|++.+++....+..+...+.++.+.++.. ..+++
T Consensus 958 ~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~----------------~l~s~ 1021 (1249)
T 3sfz_A 958 YLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK----------------TLISS 1021 (1249)
T ss_dssp EECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS----------------CEEEE
T ss_pred EcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCC----------------EEEEE
Confidence 23456899999999999999999999999999999988887777777788877766542 23456
Q ss_pred CCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeC
Q 009614 361 SSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPV 439 (531)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~ 439 (531)
+.++.+.+|+..... ...+.+|...|.+++|+|++.+++++.|++|++||+.+++++..+. |...|++++|+|
T Consensus 1022 ~~dg~i~vwd~~~~~-----~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~- 1095 (1249)
T 3sfz_A 1022 SEDSVIQVWNWQTGD-----YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISS- 1095 (1249)
T ss_dssp CSSSBEEEEETTTTE-----EECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECS-
T ss_pred cCCCEEEEEECCCCc-----eEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECC-
Confidence 678888899876533 2345689999999999998899999999999999999999988886 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeee-eeccccc
Q 009614 440 DDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQI-CLQGKKK 517 (531)
Q Consensus 440 d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~-~~~~~kk 517 (531)
++++|++++.||+|++||+.+++.+ .+.+|...|++++|+|+|++|++|+.||.|++||+.+++.+..... .......
T Consensus 1096 d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 1175 (1249)
T 3sfz_A 1096 DATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTA 1175 (1249)
T ss_dssp SSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC------
T ss_pred CCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEecccccccccc
Confidence 9999999999999999999988766 4778999999999999999999999999999999999988765421 1111123
Q ss_pred CCCceeeeEEEee
Q 009614 518 LPGKRITGFQVVK 530 (531)
Q Consensus 518 ~~~~~It~l~f~p 530 (531)
.+...|++++|+|
T Consensus 1176 ~~~~~v~~l~fs~ 1188 (1249)
T 3sfz_A 1176 THGGWVTDVCFSP 1188 (1249)
T ss_dssp -CCSCCCEEEECT
T ss_pred ccCceEEEEEECC
Confidence 4667899999987
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=2.5e-25 Score=231.29 Aligned_cols=237 Identities=19% Similarity=0.354 Sum_probs=186.4
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+.+|...+.+++| ++.++++|+.||.|++||+.... ....+.+|...|.+++|+ +.+|++|+.||.|++
T Consensus 169 ~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~v 237 (435)
T 1p22_A 169 LTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE-------MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAV 237 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC-------EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEE
T ss_pred EcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc-------EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEE
Confidence 3445566666666 88999999999999999998543 335678999999999997 459999999999999
Q ss_pred EEcccCccc---cceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecC
Q 009614 311 WKVIEHERL---DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH 387 (531)
Q Consensus 311 Wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 387 (531)
||+.++... ..+..+...+.++.+ .....+.++.++.+.+|+.... +.+..+.+|
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~v~~~~~------------------~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~ 295 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAAVNVVDF------------------DDKYIVSASGDRTIKVWNTSTC----EFVRTLNGH 295 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSCEEEEEE------------------ETTEEEEEETTSEEEEEETTTC----CEEEEEECC
T ss_pred EeCCCCCCceeeeEecCCCCcEEEEEe------------------CCCEEEEEeCCCeEEEEECCcC----cEEEEEcCC
Confidence 999887654 223333333333332 1223466778889999988763 457888999
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe----
Q 009614 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ---- 462 (531)
Q Consensus 388 ~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~---- 462 (531)
...|.++.+++ .+|++|+.|++|++||+++++++..+. |...|++++| ++.+|++|+.||.|++||+.++.
T Consensus 296 ~~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~ 371 (435)
T 1p22_A 296 KRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRA 371 (435)
T ss_dssp SSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTS
T ss_pred CCcEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccc
Confidence 99999999953 399999999999999999999999886 9999999999 56899999999999999997654
Q ss_pred -----E-EEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 463 -----V-VDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 463 -----~-~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
. ..+..|...|++++| ++.+|++|+.||.|++||+.++....
T Consensus 372 ~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 372 PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp CTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred cccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 4 457889999999999 78899999999999999998876544
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=1.2e-24 Score=217.39 Aligned_cols=234 Identities=12% Similarity=0.055 Sum_probs=189.5
Q ss_pred eeeeccccceeeeCCCC-eEEeeecCCeEEEEeC-CCCcccccccccceEEcc--cCCCEEEEEEccCCCEEEEEeCCCc
Q 009614 232 ARIIDRHGSATLKPGDH-ELTLGQRMRRVRVHPV-KKQSRELSSLYTGQEFLA--HEGSILTMKFSLDGQYLASGGEDGT 307 (531)
Q Consensus 232 ~~~~~~~~s~~fspdg~-~lasgs~dg~I~vwd~-~~~~~~~~~~~~~~~l~~--H~~~I~~l~fspdg~~Lasgs~Dg~ 307 (531)
..|...+.+++|+|++. ++++|+.||.|++|++ ..... ..+.+ |...|++++|+| +++|++++.|+.
T Consensus 53 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~--------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~ 123 (342)
T 1yfq_A 53 LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF--------QALTNNEANLGICRICKYG-DDKLIAASWDGL 123 (342)
T ss_dssp EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE--------EECBSCCCCSCEEEEEEET-TTEEEEEETTSE
T ss_pred eecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce--------EeccccCCCCceEEEEeCC-CCEEEEEcCCCe
Confidence 35667788899999999 9999999999999998 65432 45678 999999999999 999999999999
Q ss_pred EEEEEccc---------CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcc-cccc
Q 009614 308 VRVWKVIE---------HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV-FRLL 377 (531)
Q Consensus 308 I~iWd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 377 (531)
|++||+.+ ++.+..+. +...+.++.+.++. .+.++.++.+.+|+... ...
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~------------------l~~~~~d~~i~i~d~~~~~~~- 183 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR------------------LIVGMNNSQVQWFRLPLCEDD- 183 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE------------------EEEEESTTEEEEEESSCCTTC-
T ss_pred EEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc------------------EEEEeCCCeEEEEECCccccc-
Confidence 99999987 66555554 44444444443221 34556677888888765 321
Q ss_pred CcceeEeecCCCCeeEEEEcC-CC-eEEEEeCCCcEEEEECCCC------eEEEEee-cCC---------ceEEEEEeeC
Q 009614 378 EKPLHEFQGHSSEVLDLSWSK-NG-FLLSSSADKTVRLWQVGID------RCLRVFS-HNN---------YVTSVAFNPV 439 (531)
Q Consensus 378 ~~~~~~~~~h~~~I~~l~~sp-~~-~l~s~s~Dg~V~lwdl~~~------~~l~~~~-h~~---------~V~sv~fsp~ 439 (531)
........|...|.+++|+| ++ +|++++.|+.|++|++... +.+..+. |.. .|++++|+|
T Consensus 184 -~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~- 261 (342)
T 1yfq_A 184 -NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP- 261 (342)
T ss_dssp -CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-
T ss_pred -cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-
Confidence 12334556888999999999 88 9999999999999999876 6666665 544 999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEE-ecCC-CCceEEEEEccCCCEEEEEeCCCc-EEEEe
Q 009614 440 DDNYFISGSIDGKVRIWEVRRCQVVD-YTDI-REIVSAVCYCPDGKGGIVGTMTGN-CRFYD 498 (531)
Q Consensus 440 d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~~~-~~~v~~v~~spdg~~l~sgs~dg~-I~iwd 498 (531)
++++|++++.||.|++||+.+++.+. +..| ...|++++ |++++|++|+.||. .+.|.
T Consensus 262 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 262 RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred CCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 99999999999999999999998774 6677 89999999 99999999999998 55555
No 103
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.7e-26 Score=234.71 Aligned_cols=243 Identities=12% Similarity=0.082 Sum_probs=168.4
Q ss_pred cceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc--------CCCEEEEEeCCCcEEE
Q 009614 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--------DGQYLASGGEDGTVRV 310 (531)
Q Consensus 239 ~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--------dg~~Lasgs~Dg~I~i 310 (531)
....+++++.++|+|+.|++|+||+........ ......+.+|.+.|++|+|+| |+++||||+.|++|+|
T Consensus 93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~--~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~ 170 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQDNTVRLIITKNETIIT--QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLII 170 (393)
T ss_dssp ----CCEEEEEEEEEETTSCEEEEEEETTEEEE--EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEE
T ss_pred ceeecCCCCCEEEEEeCCCcEEEEECCCCccce--eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEE
Confidence 345678888899999999999999988654321 122234689999999999998 8899999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC------------
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE------------ 378 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 378 (531)
||+.++.....+..+...+.++.|.+..... .+.++.++.+.+|+........
T Consensus 171 Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~---------------l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~ 235 (393)
T 4gq1_A 171 WRLTDEGPILAGYPLSSPGISVQFRPSNPNQ---------------LIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW 235 (393)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEEETTEEEE---------------EEEEETTSEEEEEETTCCC----------CSCCC
T ss_pred EECCCCceeeeecCCCCCcEEEEECCCCCce---------------EEecCCCCEEEEEECCCCcccccccccCCcccce
Confidence 9999888777777777777777776654322 2445667777777765432211
Q ss_pred ---------cceeEeecCCCCeeEEEEc-CCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceE--------------
Q 009614 379 ---------KPLHEFQGHSSEVLDLSWS-KNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVT-------------- 432 (531)
Q Consensus 379 ---------~~~~~~~~h~~~I~~l~~s-p~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~-------------- 432 (531)
.......+|...+.++.|+ |++ .|++++.|+++++||+..++....+. |...+.
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
T 4gq1_A 236 LLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF 315 (393)
T ss_dssp SEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS
T ss_pred EEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc
Confidence 1122345788899999997 677 99999999999999998876655442 322222
Q ss_pred ----EEEEeeC-CCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeC
Q 009614 433 ----SVAFNPV-DDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 433 ----sv~fsp~-d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~ 499 (531)
...|+|. ++.++++|+.||+|+|||+.+++.+ ....|...|.+++|+|||++||+++.+| +.+|.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 316 PSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 2334442 3346677889999999999988655 4677888999999999999999999766 666654
No 104
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=8e-25 Score=217.70 Aligned_cols=211 Identities=12% Similarity=0.187 Sum_probs=170.4
Q ss_pred eEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc----cccceecCCCCCeeEEEeecCCcceeeeeccccccc
Q 009614 278 QEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE----RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKID 353 (531)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (531)
+.+.+|.+.|++|+|+|++++||+|+.||.|++||+.++. ....+..+...+.++.|.+....
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~------------- 71 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYG------------- 71 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGC-------------
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCC-------------
Confidence 3578999999999999999999999999999999998763 34445556666666666553111
Q ss_pred cccccccCCCceEEEeCCccccccC-----cceeEeecCCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeEEEEe
Q 009614 354 KTKSLRKSSDLTCVVLPPKVFRLLE-----KPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRCLRVF 425 (531)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~I~~l~~sp~--~-~l~s~s~Dg~V~lwdl~~~~~l~~~ 425 (531)
...+.++.++.+.+|+........ +++..+.+|...|.+++|+|+ + +|++++.|+.|++||+++++.+..+
T Consensus 72 -~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 72 -RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp -SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred -CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 123456677888888876543211 457778899999999999998 8 9999999999999999887654332
Q ss_pred --------------ecCCceEEEEEeeC--CCCEEEEEeCCCeEEEEeCCCCeE---EEecCCCCceEEEEEccCC----
Q 009614 426 --------------SHNNYVTSVAFNPV--DDNYFISGSIDGKVRIWEVRRCQV---VDYTDIREIVSAVCYCPDG---- 482 (531)
Q Consensus 426 --------------~h~~~V~sv~fsp~--d~~~l~sgs~Dg~I~Iwd~~~~~~---~~~~~~~~~v~~v~~spdg---- 482 (531)
.|...+.+++|+|. ++.+|++++.|+.+.+|+...++. ..+..|...|++++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 37788999999993 289999999999999998888764 2467899999999999998
Q ss_pred CEEEEEeCCCcEEEEeCCCC
Q 009614 483 KGGIVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 483 ~~l~sgs~dg~I~iwd~~~~ 502 (531)
++|++|+.||.|++||+..+
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEEEETTSCEEEEEEEEC
T ss_pred eEEEEEcCCCeEEEEeCCCC
Confidence 89999999999999999875
No 105
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=2.9e-25 Score=223.39 Aligned_cols=239 Identities=10% Similarity=0.129 Sum_probs=180.7
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEE--ccCCCEEEEEeCCCcE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKF--SLDGQYLASGGEDGTV 308 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~f--spdg~~Lasgs~Dg~I 308 (531)
+..|...+.+++|+|++++|++|+.||.|++|++...... .+.+|...|++++| +|++++|++++.||.|
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--------~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 153 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI--------QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTL 153 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--------EEEECSSCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce--------eeccccCceEEEEEEeCCCCCEEEEccCCCcE
Confidence 4556778889999999999999999999999999854421 35679999999999 8999999999999999
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
++||+.+++.+..+..+.. ...+..... ..+.+..++.+.+|+........... ...+.
T Consensus 154 ~vwd~~~~~~~~~~~~~~~---~~~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~ 212 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPER---CYCADVIYP----------------MAVVATAERGLIVYQLENQPSEFRRI--ESPLK 212 (368)
T ss_dssp EEECSSCSSCSEEEECSSC---EEEEEEETT----------------EEEEEEGGGCEEEEECSSSCEEEEEC--CCSCS
T ss_pred EEEECCCCcEEEEEecCCC---ceEEEecCC----------------eeEEEeCCCcEEEEEeccccchhhhc--ccccc
Confidence 9999999887777665431 222221111 12334455667777665432111111 12234
Q ss_pred CCeeEEEEcCCC-----eEEEEeCCCcEEEEECCCC---eEEEEee-cCC------------ceEEEEEeeCCCCEEEEE
Q 009614 389 SEVLDLSWSKNG-----FLLSSSADKTVRLWQVGID---RCLRVFS-HNN------------YVTSVAFNPVDDNYFISG 447 (531)
Q Consensus 389 ~~I~~l~~sp~~-----~l~s~s~Dg~V~lwdl~~~---~~l~~~~-h~~------------~V~sv~fsp~d~~~l~sg 447 (531)
..+.++.+.++. .+++++.|+.|++||++.. ..+..+. |.. .|++++|+| ++++|++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~ 291 (368)
T 3mmy_A 213 HQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATV 291 (368)
T ss_dssp SCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEE
T ss_pred CCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEE
Confidence 455666665544 3999999999999999987 4455554 433 799999999 99999999
Q ss_pred eCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeC
Q 009614 448 SIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 448 s~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~ 499 (531)
+.||.|+|||+.+++.+ .+..|...|++++|+|+|++|++|+.|+..+.|++
T Consensus 292 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 292 GSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp ETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred ccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 99999999999999877 47788999999999999999999999886555554
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.3e-25 Score=231.18 Aligned_cols=244 Identities=9% Similarity=0.154 Sum_probs=188.7
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCC---Ccccc-cccccceEEc--c--cCCCEEEEE--EccCCCEEEEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKK---QSREL-SSLYTGQEFL--A--HEGSILTMK--FSLDGQYLASG 302 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~---~~~~~-~~~~~~~~l~--~--H~~~I~~l~--fspdg~~Lasg 302 (531)
.|...+.+++|+|++.+|++|+.||.|++|++.. ..... ........+. . |...+.++. +++++.+|++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 3667888999999999999999999999999852 21110 0001111111 2 567788888 56889999999
Q ss_pred eCCCcEEEEEcccCccccceec--CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcc
Q 009614 303 GEDGTVRVWKVIEHERLDGFDV--QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (531)
Q Consensus 303 s~Dg~I~iWd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (531)
+.||.|++||+.+++.+..+.. +...+.++.+.++. ...+.++.++.+.+|+.+. .++
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~----------------~~l~s~~~dg~i~iwd~~~----~~~ 248 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC----------------CVLILGTTRGIIDIWDIRF----NVL 248 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS----------------CEEEEEETTSCEEEEETTT----TEE
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC----------------CEEEEEcCCCeEEEEEcCC----ccE
Confidence 9999999999999988887776 55566666665442 2234567788899998875 344
Q ss_pred eeEee-cCCCCeeEEEEcC----CC-eEEEEeCCCcEEEEECCCCeEEEEee---------------------------c
Q 009614 381 LHEFQ-GHSSEVLDLSWSK----NG-FLLSSSADKTVRLWQVGIDRCLRVFS---------------------------H 427 (531)
Q Consensus 381 ~~~~~-~h~~~I~~l~~sp----~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~---------------------------h 427 (531)
+..+. .|...|.+++|+| ++ +|++++.|++|++||+++++++..+. |
T Consensus 249 ~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (437)
T 3gre_A 249 IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRS 328 (437)
T ss_dssp EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCS
T ss_pred EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccccc
Confidence 56665 7888999997765 46 99999999999999999999888775 5
Q ss_pred CCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-ec-------------------------------------CC
Q 009614 428 NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YT-------------------------------------DI 469 (531)
Q Consensus 428 ~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~-------------------------------------~~ 469 (531)
...|++++|+ ++++|++|+.|+.|++||+.+++... +. .|
T Consensus 329 ~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 406 (437)
T 3gre_A 329 LNALSTISVS--NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYH 406 (437)
T ss_dssp GGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------
T ss_pred CCceEEEEEC--CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCccccc
Confidence 5668899998 46899999999999999998865332 22 28
Q ss_pred CCceEEEEEccC--CCEEEEEeCCCcEEEEe
Q 009614 470 REIVSAVCYCPD--GKGGIVGTMTGNCRFYD 498 (531)
Q Consensus 470 ~~~v~~v~~spd--g~~l~sgs~dg~I~iwd 498 (531)
...|++++|+++ +.+|++|+.||.|+||+
T Consensus 407 ~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 407 HDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 899999999998 78999999999999995
No 107
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=7.8e-24 Score=220.55 Aligned_cols=253 Identities=21% Similarity=0.342 Sum_probs=197.8
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+.+|...+.+++|+ +.++++|+.||.|++|++.+.. ....+.+|...|.++.|+ +++|++|+.||+|++
T Consensus 155 ~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~ 223 (445)
T 2ovr_B 155 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE-------CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRV 223 (445)
T ss_dssp CCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred EcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc-------EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEE
Confidence 34566677777776 6699999999999999987543 334678899999999995 568999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEee------cCCcceeeeecccccc----------------ccccccccCCCceEEE
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTI------NHLSQLIPIDVDKEKI----------------DKTKSLRKSSDLTCVV 368 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 368 (531)
||+.+++.+..+..+...+.++.+.. .....+..++...... .....+.++.++.+.+
T Consensus 224 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRV 303 (445)
T ss_dssp EESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEE
T ss_pred EECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEE
Confidence 99999888888877777666665511 0111111222111110 1123355667888888
Q ss_pred eCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee----cCCceEEEEEeeCCCCEE
Q 009614 369 LPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS----HNNYVTSVAFNPVDDNYF 444 (531)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~----h~~~V~sv~fsp~d~~~l 444 (531)
|+... .+.+..+.+|...+.++.++++ +|++++.|+.|++||+++++++..+. |...|++++|+ +++|
T Consensus 304 ~d~~~----~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l 375 (445)
T 2ovr_B 304 WDVET----GNCIHTLTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFV 375 (445)
T ss_dssp EETTT----CCEEEEECCCCSCEEEEEEETT-EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEE
T ss_pred EECCC----CCEEEEEcCCcccEEEEEEeCC-EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEE
Confidence 88765 3457788899999999988643 99999999999999999999998885 88899999995 4899
Q ss_pred EEEeCCCeEEEEeCCCCeEEE-e-----cCCCCceEEEEEccCCCEEEEEeCCCc----EEEEeCCCC
Q 009614 445 ISGSIDGKVRIWEVRRCQVVD-Y-----TDIREIVSAVCYCPDGKGGIVGTMTGN----CRFYDIKDN 502 (531)
Q Consensus 445 ~sgs~Dg~I~Iwd~~~~~~~~-~-----~~~~~~v~~v~~spdg~~l~sgs~dg~----I~iwd~~~~ 502 (531)
++|+.||.|++||+.+++.+. + ..+...|++++|+|++.++++|+.||+ |.+||+...
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 999999999999999998774 3 367889999999999999999999998 999998753
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=7.3e-25 Score=215.77 Aligned_cols=186 Identities=12% Similarity=0.122 Sum_probs=134.4
Q ss_pred CCCeEEeee--cCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc---CCCEEEEEeCCCcEEEEEcccCcccc
Q 009614 246 GDHELTLGQ--RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL---DGQYLASGGEDGTVRVWKVIEHERLD 320 (531)
Q Consensus 246 dg~~lasgs--~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp---dg~~Lasgs~Dg~I~iWd~~~~~~~~ 320 (531)
+++++.++. .|+.|++|++..... ....+.+|...++.++|++ ++.+||+|+.|++|+|||+.+++++.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~------~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~ 217 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGG------GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLK 217 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSC------EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCcEEEecccCCCCcEEEEEECCCCc------eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEE
Confidence 444444422 488888888753221 2234668999999999999 77999999999999999999998766
Q ss_pred ceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC
Q 009614 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG 400 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~ 400 (531)
.+..+.. |...+.+++|+|+|
T Consensus 218 tL~g~~~-----------------------------------------------------------~v~~v~~vafSpdG 238 (356)
T 2w18_A 218 KMHIDDS-----------------------------------------------------------YQASVCHKAYSEMG 238 (356)
T ss_dssp EEECCC--------------------------------------------------------------CCCEEEEEEETT
T ss_pred EEcCCCc-----------------------------------------------------------ceeeeEEEEECCCC
Confidence 5532111 11234455566655
Q ss_pred -e------------EEEEeCCCcEEEEECCCCeEEEEe------ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCC
Q 009614 401 -F------------LLSSSADKTVRLWQVGIDRCLRVF------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (531)
Q Consensus 401 -~------------l~s~s~Dg~V~lwdl~~~~~l~~~------~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~ 461 (531)
+ +++|+.|++|++||..+++++.++ .|...+.+. +. ++.++++|+.|++|+|||+.++
T Consensus 239 ~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg--~~-sg~~lASgS~DgTIkIWDl~tG 315 (356)
T 2w18_A 239 LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG--DV-KDHCAAAILTSGTIAIWDLLLG 315 (356)
T ss_dssp EEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE--EE-ETTEEEEEETTSCEEEEETTTC
T ss_pred CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc--cc-CCCEEEEEcCCCcEEEEECCCC
Confidence 3 477899999999999999988766 244444433 33 4789999999999999999999
Q ss_pred eEEE-ecCCCCceE-EEEEccCCCEEEEEeCCCcEEEEeC
Q 009614 462 QVVD-YTDIREIVS-AVCYCPDGKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 462 ~~~~-~~~~~~~v~-~v~~spdg~~l~sgs~dg~I~iwd~ 499 (531)
+++. +.+|...+. .++|+|||++|++|+.|++|+|||+
T Consensus 316 k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 316 QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9885 667776655 6899999999999999999999995
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.2e-25 Score=223.05 Aligned_cols=201 Identities=12% Similarity=0.067 Sum_probs=160.4
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcccc
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLD 320 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~ 320 (531)
..+.+++.++++|+.||.|++||+..+... ..+. ...|.++.|+|+ +++++.|++|++|+......
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~-------~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~-- 107 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTI-------TTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQIT-- 107 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCE-------EEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEE--
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEE-------EEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceE--
Confidence 355678899999999999999999865432 1222 467888899988 99999999999999754211
Q ss_pred ceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEEEEcC-
Q 009614 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSK- 398 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l~~sp- 398 (531)
+|+... .+.+..+ .+|.+.|.+++|+|
T Consensus 108 -----------------------------------------------~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~ 136 (343)
T 3lrv_A 108 -----------------------------------------------ILDSKT----NKVLREIEVDSANEIIYMYGHNE 136 (343)
T ss_dssp -----------------------------------------------EEETTT----CCEEEEEECCCSSCEEEEECCC-
T ss_pred -----------------------------------------------EeecCC----cceeEEeecCCCCCEEEEEcCCC
Confidence 011000 0112222 36778999999999
Q ss_pred -CC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE--EecC-CCC
Q 009614 399 -NG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV--DYTD-IRE 471 (531)
Q Consensus 399 -~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~--~~~~-~~~ 471 (531)
++ +|++++.|++|++||+++++++..+. |...|++++|+| ++.+|++|+.||.|+|||+++++.+ .+.. |..
T Consensus 137 ~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~ 215 (343)
T 3lrv_A 137 VNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA 215 (343)
T ss_dssp --CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC
Confidence 88 99999999999999999999877663 566899999999 9999999999999999999998765 5666 899
Q ss_pred ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 009614 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~ 508 (531)
.|++++|+|+|.+|++++ ++.|++||+++++.+..+
T Consensus 216 ~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence 999999999999999999 559999999988765443
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.5e-24 Score=226.65 Aligned_cols=239 Identities=12% Similarity=0.028 Sum_probs=182.8
Q ss_pred eccccceeeeCCCCeEEeeecCCeEEEEeCCCCccc----------------------ccccccceEEc-ccCCCEEEEE
Q 009614 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE----------------------LSSLYTGQEFL-AHEGSILTMK 291 (531)
Q Consensus 235 ~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~----------------------~~~~~~~~~l~-~H~~~I~~l~ 291 (531)
.+.|.+++|+|||+++|+++.|++|+ +....... +........+. +|...|++++
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence 36778899999999999999999996 43222100 00011111222 5688999999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcccCccccceecCCC-----CCeeEEEeecCCcceeeeeccccccccccccccCCCceE
Q 009614 292 FSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDT-----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (531)
Q Consensus 292 fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (531)
|||+|++||+++.||+|+|||..+ ++..+. +.. .+.++.|+++.. ....++.++.+
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~----------------~LAsgs~DGtV 153 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIES----------------SIVVGNEDGEL 153 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSS----------------CEEEEETTSEE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCC----------------EEEEEcCCCEE
Confidence 999999999999999999999644 333333 222 245555555432 33556778999
Q ss_pred EEeCCccccccCc---ceeEe----ecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeE---EEEe--ecCCceEEE
Q 009614 367 VVLPPKVFRLLEK---PLHEF----QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRC---LRVF--SHNNYVTSV 434 (531)
Q Consensus 367 ~~~~~~~~~~~~~---~~~~~----~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~---l~~~--~h~~~V~sv 434 (531)
.+|+.....+.+. .+.++ .+|...|.+++|+|+| +++++.|++|++||+.++.. .+++ .|...|.++
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 9999876433111 24565 6688899999999999 99999999999999988774 3455 377899999
Q ss_pred EEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEE--ccCCCEEEEEeCCCcEEEEeCC
Q 009614 435 AFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCY--CPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 435 ~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~--spdg~~l~sgs~dg~I~iwd~~ 500 (531)
+|+ +++||+++ +++|++||+.+++.. ...+|...|+.++| +||+..|++++.||+ ++|...
T Consensus 233 aFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 233 KIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 998 48899887 699999999999884 44489999999999 999999999999999 999986
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=8.3e-24 Score=219.71 Aligned_cols=237 Identities=16% Similarity=0.208 Sum_probs=179.7
Q ss_pred eEEcccCCCEEEEEEccC-CCEEEEEeCCCcEEEEEccc----------CccccceecCCCCCeeEEEeecCCcceeeee
Q 009614 278 QEFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWKVIE----------HERLDGFDVQDTDPSCLYFTINHLSQLIPID 346 (531)
Q Consensus 278 ~~l~~H~~~I~~l~fspd-g~~Lasgs~Dg~I~iWd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (531)
....+|.+.|++++|+|+ +.+||+++.||.|++|++.+ ......+..+...+.++.|.+....
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~------ 195 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG------ 195 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT------
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC------
Confidence 345689999999999997 78999999999999999987 4455555566666666666554332
Q ss_pred ccccccccccccccCCCceEEEeCCcccccc---CcceeEeecCCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCC--
Q 009614 347 VDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL---EKPLHEFQGHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGID-- 419 (531)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~h~~~I~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~-- 419 (531)
..+.++.++.+.+|+....... ..+...+.+|...|.+++|+|+ + +|++++.|+.|++||++++
T Consensus 196 ---------~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 196 ---------YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp ---------EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred ---------eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 2355677888999987652221 1235667789999999999994 4 8999999999999999987
Q ss_pred -eEEEEe-ecCCceEEEEEeeCCCC-EEEEEeCCCeEEEEeCCCC-e-EEEecCCCCceEEEEEccCCC-EEEEEeCCCc
Q 009614 420 -RCLRVF-SHNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRRC-Q-VVDYTDIREIVSAVCYCPDGK-GGIVGTMTGN 493 (531)
Q Consensus 420 -~~l~~~-~h~~~V~sv~fsp~d~~-~l~sgs~Dg~I~Iwd~~~~-~-~~~~~~~~~~v~~v~~spdg~-~l~sgs~dg~ 493 (531)
+.+..+ .|...|++|+|+| ++. +|++|+.||.|+|||+++. + +..+..|...|++++|+|+++ +|++++.||.
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p-~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~ 345 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNP-YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 345 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CcceeEeecCCCCeEEEEeCC-CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc
Confidence 456666 5999999999999 554 7999999999999999983 3 345778999999999999995 6899999999
Q ss_pred EEEEeCCCCeEEEEee------eeecccccCCCceeeeEEEee
Q 009614 494 CRFYDIKDNQLYQQNQ------ICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 494 I~iwd~~~~~l~~~~~------~~~~~~kk~~~~~It~l~f~p 530 (531)
|+|||+......+... ..+......+...|+.++|+|
T Consensus 346 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 346 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS
T ss_pred EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC
Confidence 9999998732111000 000011233456899999987
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.6e-24 Score=216.35 Aligned_cols=203 Identities=12% Similarity=0.083 Sum_probs=156.4
Q ss_pred ccccceeeeCCCCeEEeeecCCeEEEEeCCCCccc--ccccccceEE-cccCCCEEEEEEcc--CCCEEEEEeCCCcEEE
Q 009614 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE--LSSLYTGQEF-LAHEGSILTMKFSL--DGQYLASGGEDGTVRV 310 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~--~~~~~~~~~l-~~H~~~I~~l~fsp--dg~~Lasgs~Dg~I~i 310 (531)
..+.++.++|+ +++|+.|++|++|+....... .......+.+ .+|.+.|.+++|+| ++++|++|+.||+|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 45667888888 999999999999988743211 1111111122 36778999999999 9999999999999999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
||+.+++..... ...|...
T Consensus 154 wd~~~~~~~~~~-------------------------------------------------------------~~~~~~~ 172 (343)
T 3lrv_A 154 QSYEDDSQYIVH-------------------------------------------------------------SAKSDVE 172 (343)
T ss_dssp EESSSSCEEEEE-------------------------------------------------------------CCCSSCC
T ss_pred EECCCCcEEEEE-------------------------------------------------------------ecCCCCc
Confidence 999876531110 1224557
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEE-EEee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-
Q 009614 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCL-RVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD- 465 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l-~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~- 465 (531)
|.+++|+|++ +|++|+.|+.|++||+++++.+ ..+. |...|++++|+| ++.+|++++ |+.|+|||+++.+.+.
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCccee
Confidence 9999999999 9999999999999999999877 5563 899999999999 999999999 5599999999876542
Q ss_pred ec---CCCCce--EEEEEccCCCEEEEEeC-CCcEEEEeCCCCeE
Q 009614 466 YT---DIREIV--SAVCYCPDGKGGIVGTM-TGNCRFYDIKDNQL 504 (531)
Q Consensus 466 ~~---~~~~~v--~~v~~spdg~~l~sgs~-dg~I~iwd~~~~~l 504 (531)
+. .+...+ .+++|+|+|++|++++. |+.|+||++.....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 251 YPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp SCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred ecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 21 122333 46999999999999998 99999999966543
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=8.4e-24 Score=218.87 Aligned_cols=262 Identities=12% Similarity=0.113 Sum_probs=205.9
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
.+.+++|+|++.++++++.++.|++||..++.... ......+.+|.+.|++++|+++++++++++.|+.|++||+.++
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVR--LSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEE--ECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEee--ecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 34578999988888889899999999998655331 1111135689999999999999999999999999999999998
Q ss_pred ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEE
Q 009614 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (531)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~ 396 (531)
+....+..+...+.++.+.++....+ +....++.+.+|+.... +.+..+.. ...+.+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~---------------~~~~~~~~i~~~d~~~~----~~~~~~~~-~~~~~~~~~ 261 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVY---------------CSNWISEDISVIDRKTK----LEIRKTDK-IGLPRGLLL 261 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEE---------------EEETTTTEEEEEETTTT----EEEEECCC-CSEEEEEEE
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEE---------------EEecCCCcEEEEECCCC----cEEEEecC-CCCceEEEE
Confidence 88777776666666666655432211 22335667888887643 23444444 345999999
Q ss_pred cCCC-eEEEEe--------CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCC-EEEEEeCCCeEEEEeCCCCeEEEe
Q 009614 397 SKNG-FLLSSS--------ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRRCQVVDY 466 (531)
Q Consensus 397 sp~~-~l~s~s--------~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~-~l~sgs~Dg~I~Iwd~~~~~~~~~ 466 (531)
+|++ .|++++ .|+.|++||+.+++.+..+.|...+.+++|+| +++ ++++++.|+.|++||+.+++++..
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~~~~ 340 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKVQKS 340 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcEEEE
Confidence 9999 787777 58899999999999998888888999999999 775 557778999999999999998876
Q ss_pred cCCCCceEEEEEccCCCEEEEEeC---------------CCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 467 TDIREIVSAVCYCPDGKGGIVGTM---------------TGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 467 ~~~~~~v~~v~~spdg~~l~sgs~---------------dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
..+...+.+++|+|+|++|++++. ||.|++||+.+++++..+.. ...+++++|+|
T Consensus 341 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---------~~~~~~~~~s~ 410 (433)
T 3bws_A 341 IPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---------GNQPTGLDVSP 410 (433)
T ss_dssp EECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---------SSSEEEEEECT
T ss_pred ecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---------CCCCceEEEcC
Confidence 678888999999999999988877 57999999999998776542 24567787775
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=5.3e-24 Score=217.48 Aligned_cols=222 Identities=18% Similarity=0.312 Sum_probs=174.5
Q ss_pred CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEcccCcccccee-----------
Q 009614 256 MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRVWKVIEHERLDGFD----------- 323 (531)
Q Consensus 256 dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~Lasgs~Dg~I~iWd~~~~~~~~~~~----------- 323 (531)
++.+++|++.... ....+.+|.+.|++++|+| ++++|++|+.||.|++||+.++.....+.
T Consensus 22 ~~~~~v~~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 94 (408)
T 4a11_B 22 ESTRRVLGLELNK-------DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDH 94 (408)
T ss_dssp HHHHHHHTEEECT-------TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTC
T ss_pred cCcceeeccccCc-------ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccc
Confidence 4556677665322 2245678999999999999 99999999999999999999887665543
Q ss_pred --cCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCC--
Q 009614 324 --VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN-- 399 (531)
Q Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~-- 399 (531)
.+...+.++.|.+.... ..+.++.++.+.+|+..... .+..+ .+...+.++.++|.
T Consensus 95 ~~~~~~~v~~~~~~~~~~~---------------~l~s~~~d~~i~iwd~~~~~----~~~~~-~~~~~~~~~~~~~~~~ 154 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTG---------------MFTSSSFDKTLKVWDTNTLQ----TADVF-NFEETVYSHHMSPVST 154 (408)
T ss_dssp TTCCSSCEEEEEECTTCTT---------------CEEEEETTSEEEEEETTTTE----EEEEE-ECSSCEEEEEECSSCS
T ss_pred cccCCCcEEEEEEccCCCc---------------EEEEEeCCCeEEEeeCCCCc----cceec-cCCCceeeeEeecCCC
Confidence 24444555555442222 23455677889999876533 23333 37788999999984
Q ss_pred -C-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCC-EEEEEeCCCeEEEEeCCCCeE-E-Ee-------
Q 009614 400 -G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRRCQV-V-DY------- 466 (531)
Q Consensus 400 -~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~-~l~sgs~Dg~I~Iwd~~~~~~-~-~~------- 466 (531)
+ ++++++.|+.|++||+++++.+..+. |...|++++|+| ++. +|++|+.||.|++||++++.. + .+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKK 233 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS
T ss_pred CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCccccccccccccc
Confidence 3 89999999999999999999888886 999999999999 666 699999999999999987641 1 22
Q ss_pred --------cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 467 --------TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 467 --------~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
..|...|++++|+|++++|++++.||.|++||+.+++..
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence 567889999999999999999999999999999987654
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.4e-24 Score=236.26 Aligned_cols=234 Identities=17% Similarity=0.194 Sum_probs=182.6
Q ss_pred eEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc--cCccccceecCCCCCeeEEEeecCCcceeeeeccccccccc
Q 009614 278 QEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI--EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (531)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (531)
..+.+|.+.|++++|+|+|++|++|+.||+|+|||+. ++.....+..+...+.++.|.+.....
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-------------- 68 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-------------- 68 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS--------------
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC--------------
Confidence 3578999999999999999999999999999999998 455666666777777777776553222
Q ss_pred cccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeE---EEEeecCC
Q 009614 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRC---LRVFSHNN 429 (531)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~--~-~l~s~s~Dg~V~lwdl~~~~~---l~~~~h~~ 429 (531)
..++++.++.+.+|+..... ...+..+.+|...|.+++|+|+ + .|++|+.||.|++||++++.. .....|..
T Consensus 69 ~l~s~s~Dg~I~vwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 69 ILASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp EEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred EEEEEeCCCeEEEEECCCCc--ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 23456678889999866532 1256778889999999999998 7 999999999999999988732 23335899
Q ss_pred ceEEEEEeeC------------CCCEEEEEeCCCeEEEEeCCCC----eEE-EecCCCCceEEEEEccC---CCEEEEEe
Q 009614 430 YVTSVAFNPV------------DDNYFISGSIDGKVRIWEVRRC----QVV-DYTDIREIVSAVCYCPD---GKGGIVGT 489 (531)
Q Consensus 430 ~V~sv~fsp~------------d~~~l~sgs~Dg~I~Iwd~~~~----~~~-~~~~~~~~v~~v~~spd---g~~l~sgs 489 (531)
.|++++|+|. ++.+|++|+.||.|++||++++ .+. .+.+|...|++++|+|+ +++|++|+
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 9999999994 4889999999999999999876 333 47789999999999999 99999999
Q ss_pred CCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 490 MTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 490 ~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.||.|++||+.+++....... .....+...|++++|+|
T Consensus 227 ~Dg~I~iwd~~~~~~~~~~~~---~~~~~~~~~v~~l~~sp 264 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGPWKKTL---LKEEKFPDVLWRASWSL 264 (753)
T ss_dssp SSSCEEEEEESSSSSCCBCCB---SSSSCCSSCCCCEEECT
T ss_pred cCCEEEEecCCCCCCcceeEE---eccCCCCCceEEEEEcC
Confidence 999999999998753221111 11234567889999886
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.9e-23 Score=215.06 Aligned_cols=246 Identities=11% Similarity=0.038 Sum_probs=188.3
Q ss_pred ceeeeccccceeeeCCCCeE-EeeecCCeEEEEeCC--CCcccccccccceEEc--ccCCCEEEEEEccCCCEEEEEeCC
Q 009614 231 MARIIDRHGSATLKPGDHEL-TLGQRMRRVRVHPVK--KQSRELSSLYTGQEFL--AHEGSILTMKFSLDGQYLASGGED 305 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~l-asgs~dg~I~vwd~~--~~~~~~~~~~~~~~l~--~H~~~I~~l~fspdg~~Lasgs~D 305 (531)
...+...+.+++|+|++++| ++|+.||.|+||++. .... .+.+. .|...|++++|+|++++|++|+.|
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~ 170 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-------LKLRKRFCFSKRPNAISIAEDDTTVIIADKF 170 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-------EEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-------eeeeecccCCCCceEEEEcCCCCEEEEEeCC
Confidence 34556678899999999996 889999999999987 3321 12343 677899999999999999999999
Q ss_pred CcEEEEEcccCcccc----ceecCCCCCeeEEEeecC-CcceeeeeccccccccccccccCCCceEEEeCCccccccCcc
Q 009614 306 GTVRVWKVIEHERLD----GFDVQDTDPSCLYFTINH-LSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (531)
Q Consensus 306 g~I~iWd~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (531)
|.|++|++.++.... .+..+...+.++.|.++. .. ...+.++.++.+.+|+.... +.
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~--------------~~l~s~~~d~~i~vwd~~~~----~~ 232 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGH--------------QFIITSDRDEHIKISHYPQC----FI 232 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSC--------------EEEEEEETTSCEEEEEESCT----TC
T ss_pred CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCC--------------cEEEEEcCCCcEEEEECCCC----ce
Confidence 999999998877554 566666777777777651 11 12244566778888886542 33
Q ss_pred eeE-eecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeec--------------------------CCceE
Q 009614 381 LHE-FQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH--------------------------NNYVT 432 (531)
Q Consensus 381 ~~~-~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h--------------------------~~~V~ 432 (531)
+.. +.+|...|.+++|+ ++ +|++++.|++|++||+.+++++..+.. ...|.
T Consensus 233 ~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 233 VDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp EEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 444 56899999999999 88 999999999999999999998888751 24689
Q ss_pred EEEEeeCCCCEEEEEe-CCCeEEEEeC--CCC---eEEE-ecCCCCceEEEEEccCCCEEEEEeC------CCcEEEEeC
Q 009614 433 SVAFNPVDDNYFISGS-IDGKVRIWEV--RRC---QVVD-YTDIREIVSAVCYCPDGKGGIVGTM------TGNCRFYDI 499 (531)
Q Consensus 433 sv~fsp~d~~~l~sgs-~Dg~I~Iwd~--~~~---~~~~-~~~~~~~v~~v~~spdg~~l~sgs~------dg~I~iwd~ 499 (531)
+|+|+| ++++|++++ .|+.|+||++ .++ +.+. +..+ ..|.+++|+|++.++++++. +..|.+|.+
T Consensus 312 ~i~~~~-~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 312 KIIKSK-NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp EEEECS-SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred EEEEeC-CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 999999 999999998 8999999999 554 4443 4444 88999999996544444343 455788876
Q ss_pred C--CCeE
Q 009614 500 K--DNQL 504 (531)
Q Consensus 500 ~--~~~l 504 (531)
. ++++
T Consensus 390 ~~~~~~~ 396 (450)
T 2vdu_B 390 NLNENSF 396 (450)
T ss_dssp ETTTTEE
T ss_pred EcCCCeE
Confidence 4 4554
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=2.7e-22 Score=204.63 Aligned_cols=244 Identities=11% Similarity=0.095 Sum_probs=188.8
Q ss_pred cccceeeeCCCCeE-EeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEE-eCCCcEEEEEcc
Q 009614 237 RHGSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASG-GEDGTVRVWKVI 314 (531)
Q Consensus 237 ~~~s~~fspdg~~l-asgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasg-s~Dg~I~iWd~~ 314 (531)
.+.+++|+|+++++ ++++.++.|++||...... .+.+..|. .|.+++|+|++++|+.+ +.|+.|++||+.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~-------~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV-------IATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE-------EEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeE-------EEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 35678999999987 6777999999999875432 23344444 89999999999988654 567999999999
Q ss_pred cCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEE
Q 009614 315 EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (531)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l 394 (531)
+++....+..+. .+..+.+.++.... .+....++.+.+|+.... +.+..+..| ..+.++
T Consensus 105 ~~~~~~~~~~~~-~~~~~~~s~dg~~l---------------~~~~~~~~~v~~~d~~~~----~~~~~~~~~-~~~~~~ 163 (391)
T 1l0q_A 105 SNTVAGTVKTGK-SPLGLALSPDGKKL---------------YVTNNGDKTVSVINTVTK----AVINTVSVG-RSPKGI 163 (391)
T ss_dssp TTEEEEEEECSS-SEEEEEECTTSSEE---------------EEEETTTTEEEEEETTTT----EEEEEEECC-SSEEEE
T ss_pred CCeEEEEEeCCC-CcceEEECCCCCEE---------------EEEeCCCCEEEEEECCCC----cEEEEEecC-CCcceE
Confidence 988766665432 23444444332211 123455678888887653 334455544 457999
Q ss_pred EEcCCC-eE-EEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEe---CCCeEEEEeCCCCeEEEecCC
Q 009614 395 SWSKNG-FL-LSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS---IDGKVRIWEVRRCQVVDYTDI 469 (531)
Q Consensus 395 ~~sp~~-~l-~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs---~Dg~I~Iwd~~~~~~~~~~~~ 469 (531)
+|+|++ +| ++++.++.|++||+++++++..+.+...+.+++|+| ++++|++++ .++.|++||+.+++.+.....
T Consensus 164 ~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 242 (391)
T 1l0q_A 164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV 242 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEec
Confidence 999999 55 677889999999999999999999888999999999 898888887 689999999999988865555
Q ss_pred CCceEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEEEEeee
Q 009614 470 REIVSAVCYCPDGKGG-IVGTMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 470 ~~~v~~v~~spdg~~l-~sgs~dg~I~iwd~~~~~l~~~~~~ 510 (531)
...+.+++|+|+|++| ++++.|+.|++||+.+++++..+..
T Consensus 243 ~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 243 GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 5678999999999987 5668899999999999999887654
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=2.6e-22 Score=204.76 Aligned_cols=244 Identities=13% Similarity=0.161 Sum_probs=188.8
Q ss_pred CeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEE-EEEeCCCcEEEEEcccCccccceecCC
Q 009614 248 HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHERLDGFDVQD 326 (531)
Q Consensus 248 ~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-asgs~Dg~I~iWd~~~~~~~~~~~~~~ 326 (531)
.++++++.++.|++||...... .+.+..|. .+.+++|+|+|++| ++++.|+.|++||+.+++....+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~-------~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV-------TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE-------EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCCCeE-------EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC
Confidence 4678899999999999985432 23455564 58999999999977 677799999999999998877776544
Q ss_pred CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eE-EE
Q 009614 327 TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FL-LS 404 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l-~s 404 (531)
.+.++.+.++....+ +.+..++.+.+|+..... .+..+. +...+.+++|+|++ .| ++
T Consensus 75 -~v~~~~~spdg~~l~---------------~~~~~~~~v~v~d~~~~~----~~~~~~-~~~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVY---------------VTNMASSTLSVIDTTSNT----VAGTVK-TGKSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp -SEEEEEECTTSSEEE---------------EEETTTTEEEEEETTTTE----EEEEEE-CSSSEEEEEECTTSSEEEEE
T ss_pred -CccceEECCCCCEEE---------------EEECCCCEEEEEECCCCe----EEEEEe-CCCCcceEEECCCCCEEEEE
Confidence 455555554432111 223445778888776532 344444 34578999999998 55 78
Q ss_pred EeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEE-EEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCC
Q 009614 405 SSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYF-ISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (531)
Q Consensus 405 ~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l-~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~ 483 (531)
++.++.|++||+.+++.+..+.....+.+++|+| +++++ ++++.++.|++||+.+++.+....+...+.+++|+|+|+
T Consensus 134 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 212 (391)
T 1l0q_A 134 NNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGT 212 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSS
T ss_pred eCCCCEEEEEECCCCcEEEEEecCCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCC
Confidence 8889999999999999999988777889999999 88776 677889999999999999887777788899999999999
Q ss_pred EEEEEe---CCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 484 GGIVGT---MTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 484 ~l~sgs---~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+|++++ .++.|++||+.+++.+..+... ..+.+++|+|
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~---------~~~~~~~~s~ 253 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKITARIPVG---------PDPAGIAVTP 253 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEEEEECC---------SSEEEEEECT
T ss_pred EEEEEecCcCCCcEEEEECCCCeEEEEEecC---------CCccEEEEcc
Confidence 999988 6899999999999887655432 2356666654
No 119
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=9.4e-23 Score=213.21 Aligned_cols=241 Identities=20% Similarity=0.217 Sum_probs=194.9
Q ss_pred ceeeeccccceeee--CCCCeEEeeecCCeEEEEeCCCCccccc----------------ccccceEEcccCCCEEEEEE
Q 009614 231 MARIIDRHGSATLK--PGDHELTLGQRMRRVRVHPVKKQSRELS----------------SLYTGQEFLAHEGSILTMKF 292 (531)
Q Consensus 231 ~~~~~~~~~s~~fs--pdg~~lasgs~dg~I~vwd~~~~~~~~~----------------~~~~~~~l~~H~~~I~~l~f 292 (531)
+..|...+.+++|+ +++.++++|+.||.|++|++........ .......+.+|...|.++
T Consensus 199 ~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-- 276 (464)
T 3v7d_B 199 FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV-- 276 (464)
T ss_dssp ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--
T ss_pred ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--
Confidence 44566778888888 6889999999999999999986543211 111244678999999987
Q ss_pred ccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCc
Q 009614 293 SLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPK 372 (531)
Q Consensus 293 spdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (531)
++++++|++|+.||.|++||+.+++.+..+..+...+.++.+.++.. ..+.++.++.+.+|+..
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK----------------RCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT----------------EEEEEETTSCEEEEETT
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC----------------EEEEEeCCCcEEEEECC
Confidence 56789999999999999999999998888877777777776665432 23456778889999876
Q ss_pred cccccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCe
Q 009614 373 VFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGK 452 (531)
Q Consensus 373 ~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~ 452 (531)
. .+++..+.+|...|.+++|++ .+|++++.|++|++||+.++.....+.+...+..++|+| ++.++++|+ ||.
T Consensus 341 ~----~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~-dg~ 413 (464)
T 3v7d_B 341 N----GELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYV-SDNILVSGS-ENQ 413 (464)
T ss_dssp T----TEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEE-CSSEEEEEE-TTE
T ss_pred C----CcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEe-CCCEEEEec-CCe
Confidence 5 356788899999999999984 399999999999999999998888888888999999999 999999998 899
Q ss_pred EEEEeCCCCeEEE--ecCCCCceEEEEEccCCCEEEEEeCCCcEEEE
Q 009614 453 VRIWEVRRCQVVD--YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFY 497 (531)
Q Consensus 453 I~Iwd~~~~~~~~--~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iw 497 (531)
|+|||+.+++++. ...+...|++++|+ +..++++++.+|.+.+|
T Consensus 414 i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 414 FNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred EEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 9999999999885 57788999999997 34455556667765544
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=2e-22 Score=208.50 Aligned_cols=247 Identities=9% Similarity=0.074 Sum_probs=189.5
Q ss_pred eeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEE-EeCCCcEEEE
Q 009614 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLAS-GGEDGTVRVW 311 (531)
Q Consensus 233 ~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Las-gs~Dg~I~iW 311 (531)
.|...+.+++|+|++.++++++.++.|++|+..... ....+..|...+.+++|+|++++|++ ++.|+.|++|
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA-------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVI 239 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC-------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce-------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEE
Confidence 445567788999999999999999999999987533 22456689999999999999998854 4579999999
Q ss_pred EcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCe
Q 009614 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (531)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I 391 (531)
|+.+++....+.... .+..+.+.++... ++......... ...++.+.+|+..... .+. ...|...+
T Consensus 240 d~~~~~~~~~~~~~~-~~~~~~~~~~g~~-l~~~~~~~~~~-------~~~dg~i~~~d~~~~~----~~~-~~~~~~~~ 305 (433)
T 3bws_A 240 DRKTKLEIRKTDKIG-LPRGLLLSKDGKE-LYIAQFSASNQ-------ESGGGRLGIYSMDKEK----LID-TIGPPGNK 305 (433)
T ss_dssp ETTTTEEEEECCCCS-EEEEEEECTTSSE-EEEEEEESCTT-------CSCCEEEEEEETTTTE----EEE-EEEEEECE
T ss_pred ECCCCcEEEEecCCC-CceEEEEcCCCCE-EEEEECCCCcc-------ccCCCeEEEEECCCCc----EEe-eccCCCCc
Confidence 999888766655432 2344444443322 22211111110 0257788888876532 222 23456689
Q ss_pred eEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeC---------------CCeEE
Q 009614 392 LDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSI---------------DGKVR 454 (531)
Q Consensus 392 ~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~---------------Dg~I~ 454 (531)
.+++|+|++ ++++++.|+.|++||+.+++.+..+.+...+.+++|+| +++++++++. ||.|+
T Consensus 306 ~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~ 384 (433)
T 3bws_A 306 RHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVY 384 (433)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEE
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEE
Confidence 999999998 55677899999999999999999999999999999999 8998888876 57999
Q ss_pred EEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeC-CCcEEEEeCCC
Q 009614 455 IWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTM-TGNCRFYDIKD 501 (531)
Q Consensus 455 Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~-dg~I~iwd~~~ 501 (531)
+||+.+++.+........+.+++|+|+|++|++++. |+.|++|++..
T Consensus 385 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 385 VIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 999999998876556778999999999999998875 99999999863
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.1e-23 Score=220.13 Aligned_cols=222 Identities=8% Similarity=0.041 Sum_probs=164.5
Q ss_pred eccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCC-----CEEEEEEccCCCEEEEEeCCCcEE
Q 009614 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG-----SILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 235 ~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~-----~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.+.+++|+|+|.+||+++.||.|+||+... ....+. |.. .|.+++|||||++||+|+.||+|+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE---------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 46788899999999999999999999999543 222344 554 599999999999999999999999
Q ss_pred EEEcccCcc-------ccce----ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 310 VWKVIEHER-------LDGF----DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 310 iWd~~~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
|||+.++.. +..+ ..+...+.++.|.++. .+.++.|..+.+|+.......
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg------------------Laass~D~tVrlWd~~~~~~~- 215 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV------------------LVAALSNNSVFSMTVSASSHQ- 215 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE------------------EEEEETTCCEEEECCCSSSSC-
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc------------------EEEEeCCCeEEEEECCCCccc-
Confidence 999988753 3333 2233455555555433 234566788999987653321
Q ss_pred cceeEe-ecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeE-EEEeecCCceEEEEE--eeCCCCEEEEEeCCCeEE
Q 009614 379 KPLHEF-QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRC-LRVFSHNNYVTSVAF--NPVDDNYFISGSIDGKVR 454 (531)
Q Consensus 379 ~~~~~~-~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~-l~~~~h~~~V~sv~f--sp~d~~~l~sgs~Dg~I~ 454 (531)
...+++ .+|...|.+++|+ ++.|++++ +++|++||+.+++. ...+.|...|..|+| +| ++..+++++.||+ +
T Consensus 216 ~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-k 291 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-K 291 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-E
T ss_pred cceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-E
Confidence 123456 4788999999999 44888887 69999999999888 445589999999999 99 9999999999999 9
Q ss_pred EEeCCCCe-----------------------EEEecCCCCceEEEEEccCCCEEEEEe
Q 009614 455 IWEVRRCQ-----------------------VVDYTDIREIVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 455 Iwd~~~~~-----------------------~~~~~~~~~~v~~v~~spdg~~l~sgs 489 (531)
+|....-. ......+...|++++|+|||+.+|+++
T Consensus 292 lw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 292 VLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp EEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred EEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEE
Confidence 99875211 000011122467777777777777765
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=2.9e-22 Score=202.72 Aligned_cols=201 Identities=13% Similarity=0.137 Sum_probs=135.3
Q ss_pred EEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeecccccccccccc
Q 009614 279 EFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSL 358 (531)
Q Consensus 279 ~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (531)
.+.+|...|++++|+|||++||+|+.|+ ++||++.+++........ ....+.+.+..... .+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---------------~~ 75 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYV---------------AF 75 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEE---------------EE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEE---------------EE
Confidence 4578999999999999999999998776 789998877654433222 23333332221110 11
Q ss_pred ccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCC------------------------------------CeE
Q 009614 359 RKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN------------------------------------GFL 402 (531)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~------------------------------------~~l 402 (531)
.++.++.+.+|+..... .+..+. |...|.+++++++ .++
T Consensus 76 ~~~~d~~v~iWd~~~~~----~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~l 150 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQ----DVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLL 150 (355)
T ss_dssp ECSSTTEEEEEETTTTE----EEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEE
T ss_pred EECCccEEEEEECCCCc----EEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEE
Confidence 22233344444433211 112221 2223333333322 334
Q ss_pred EE--EeCCCcEEEEECCCCe----------------EEEEe-ecCCceEEEEEeeCCCCEEEEEeCCCe-EEEEeCCCCe
Q 009614 403 LS--SSADKTVRLWQVGIDR----------------CLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGK-VRIWEVRRCQ 462 (531)
Q Consensus 403 ~s--~s~Dg~V~lwdl~~~~----------------~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~-I~Iwd~~~~~ 462 (531)
+. |+.||.|++||+.++. ++..+ .|...|++++|+| ++++|++|+.|++ |+|||+.+++
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCc
Confidence 43 5789999999998765 14445 4999999999999 9999999999998 9999999998
Q ss_pred EEE-ec-C-CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 463 VVD-YT-D-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 463 ~~~-~~-~-~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
.+. +. + |...|++++|+|+|++|++++.||+|+|||+..+.
T Consensus 230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 875 44 4 89999999999999999999999999999998764
No 123
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=7.7e-22 Score=194.65 Aligned_cols=209 Identities=19% Similarity=0.194 Sum_probs=157.4
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCccccc----------------------------------ccccceE
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS----------------------------------SLYTGQE 279 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~----------------------------------~~~~~~~ 279 (531)
|...|.+++|+|+++++|+|+.||.|++|++.++..... .......
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEE
Confidence 345677899999999999999999999999986543110 0112235
Q ss_pred EcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccce----ecCCCCCeeEEEeecCCcceeeeeccccccccc
Q 009614 280 FLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGF----DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (531)
Q Consensus 280 l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (531)
+.+|...+..+.|++++++|++++.||+|++||+.+++..... ..+...+..+.+.+.... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------------~~ 212 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN-------------VL 212 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT-------------EE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc-------------EE
Confidence 6789999999999999999999999999999999887643221 122222233333322221 12
Q ss_pred cccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEE--eCCCcEEEEECCCCeEEEEee-cCCce
Q 009614 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSS--SADKTVRLWQVGIDRCLRVFS-HNNYV 431 (531)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~--s~Dg~V~lwdl~~~~~l~~~~-h~~~V 431 (531)
....++.++.+.+|+..... ......|...+..+.|+|.+ .++++ +.|+.|++||+++++++..+. |...|
T Consensus 213 ~~~~~~~~~~i~lwd~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V 287 (318)
T 4ggc_A 213 ATGGGTSDRHIRIWNVCSGA-----CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 287 (318)
T ss_dssp EEEECTTTCEEEEEETTTCC-----EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred EEEecCCCCEEEEEeccccc-----ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 22345667778888765532 33445677889999999988 55554 479999999999999999996 99999
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEeCCCC
Q 009614 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (531)
Q Consensus 432 ~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~ 461 (531)
++|+|+| ++++|++|+.||+|+|||+...
T Consensus 288 ~~l~~sp-dg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 288 LSLTMSP-DGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEECT-TSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEEcC-CCCEEEEEecCCeEEEEECCCC
Confidence 9999999 9999999999999999999764
No 124
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=8.8e-22 Score=203.64 Aligned_cols=212 Identities=20% Similarity=0.249 Sum_probs=161.5
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCccccc----------------------------------ccccceE
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS----------------------------------SLYTGQE 279 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~----------------------------------~~~~~~~ 279 (531)
|.+.|.+++|+|+|++||+|+.||.|+||++........ .......
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEE
Confidence 445678899999999999999999999999876542110 0112245
Q ss_pred EcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccc----cceecCCCCCeeEEEeecCCcceeeeeccccccccc
Q 009614 280 FLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL----DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (531)
Q Consensus 280 l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (531)
+.+|...+..+.|+|++++|++++.|+.|++|++.+++.. .....+...+.++.+.+.....+
T Consensus 226 ~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~l------------- 292 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL------------- 292 (420)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEE-------------
T ss_pred ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEE-------------
Confidence 7789999999999999999999999999999999876532 22333344444455544433322
Q ss_pred cccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEe--CCCcEEEEECCCCeEEEEee-cCCce
Q 009614 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSS--ADKTVRLWQVGIDRCLRVFS-HNNYV 431 (531)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s--~Dg~V~lwdl~~~~~l~~~~-h~~~V 431 (531)
....++.|+.+.+|+..... .+..+.. ...+.++.|+|++ .+++++ .|+.|+|||+.+++++..+. |...|
T Consensus 293 a~~~gs~D~~I~iwd~~t~~----~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V 367 (420)
T 4gga_A 293 ATGGGTSDRHIRIWNVCSGA----CLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 367 (420)
T ss_dssp EEEECTTTCEEEEEETTTTE----EEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred EEEeecCCCEEEEEeCCccc----cceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 22345678899999876543 3444444 4578999999998 666654 79999999999999999986 99999
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE
Q 009614 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (531)
Q Consensus 432 ~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~ 464 (531)
++|+|+| ++.+|++|+.|++|+|||+......
T Consensus 368 ~~l~~sp-dg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 368 LSLTMSP-DGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp EEEEECT-TSSCEEEEETTTEEEEECCSCSSCC
T ss_pred EEEEEcC-CCCEEEEEecCCeEEEEECCCCCcc
Confidence 9999999 9999999999999999999875433
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=5e-21 Score=197.95 Aligned_cols=220 Identities=11% Similarity=0.068 Sum_probs=174.4
Q ss_pred cceeeeccccceeeeCCCCeEEeeecCC---eEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEE-EEeCC
Q 009614 230 AMARIIDRHGSATLKPGDHELTLGQRMR---RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGED 305 (531)
Q Consensus 230 ~~~~~~~~~~s~~fspdg~~lasgs~dg---~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-sgs~D 305 (531)
.+..+...+.+++|+|+|++|++++.++ .|++||+.++.. ..+..|.+.+.+++|+|||++|+ +++.|
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--------~~l~~~~~~~~~~~~spdg~~la~~~~~~ 244 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--------RQVASFPRHNGAPAFSPDGSKLAFALSKT 244 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--------EEEECCSSCEEEEEECTTSSEEEEEECTT
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE--------EEeecCCCcccCEEEcCCCCEEEEEEecC
Confidence 4555667788899999999999998875 999999986432 23667888999999999999888 66666
Q ss_pred Cc--EEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 306 GT--VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 306 g~--I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
+. |++||+.+++. ..
T Consensus 245 g~~~i~~~d~~~~~~---------------------------------------------------------------~~ 261 (415)
T 2hqs_A 245 GSLNLYVMDLASGQI---------------------------------------------------------------RQ 261 (415)
T ss_dssp SSCEEEEEETTTCCE---------------------------------------------------------------EE
T ss_pred CCceEEEEECCCCCE---------------------------------------------------------------Ee
Confidence 65 88899866541 22
Q ss_pred eecCCCCeeEEEEcCCC-eEEEEeC-CC--cEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCC---CeEEEE
Q 009614 384 FQGHSSEVLDLSWSKNG-FLLSSSA-DK--TVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSID---GKVRIW 456 (531)
Q Consensus 384 ~~~h~~~I~~l~~sp~~-~l~s~s~-Dg--~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~D---g~I~Iw 456 (531)
+..|...+.+++|+|+| .|++++. ++ .|.+||+.+++......+...+.+++|+| ++++|++++.+ ..|++|
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEE
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEE
Confidence 34567789999999999 7877775 44 68888998887655555778899999999 99999888764 589999
Q ss_pred eCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCC---cEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEeeC
Q 009614 457 EVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTG---NCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVKI 531 (531)
Q Consensus 457 d~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg---~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p~ 531 (531)
|+.+++...+..+. .+.+++|+|||++|++++.++ .|++||+.++.+. .+ ..+...|..++|+|.
T Consensus 341 d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~-~l--------~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 341 DLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA-RL--------PATDGQVKFPAWSPY 408 (415)
T ss_dssp ETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE-EC--------CCSSSEEEEEEECCC
T ss_pred ECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEE-Ee--------eCCCCCCcCCccccc
Confidence 99999887766664 899999999999999998877 7999999855432 21 123478999999984
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=8.5e-22 Score=202.12 Aligned_cols=226 Identities=12% Similarity=0.083 Sum_probs=152.0
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccc-----cceecCCCCCeeEEEeecCCcceeeeeccccccccccccc
Q 009614 285 GSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL-----DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLR 359 (531)
Q Consensus 285 ~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (531)
..+....+.+++.+||+|+.|++|+|||+.++... ..+..|...+..+.|.+.... ........+.+
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~--------~~~~d~~~las 161 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSA--------DNRLAEQVIAS 161 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECT--------TCSEEEEEEEE
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEcccccc--------ccCCCCCEEEE
Confidence 33334444556778999999999999999887643 334566677777777653210 11123345577
Q ss_pred cCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEe------------
Q 009614 360 KSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVF------------ 425 (531)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~------------ 425 (531)
++.|..+.+|+... ..++..+.+|...|.+++|+|++ +|++++.|++|++||+++++.....
T Consensus 162 ~s~D~tv~~Wd~~~----~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 162 VGDDCTLIIWRLTD----EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EETTSEEEEEEEET----TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSE
T ss_pred EECCCeEEEEECCC----CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEE
Confidence 88999999998754 34566778899999999999987 7999999999999999887654321
Q ss_pred --------------ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-ecCCCCceEE---------------
Q 009614 426 --------------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDIREIVSA--------------- 475 (531)
Q Consensus 426 --------------~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~~~~~~v~~--------------- 475 (531)
.|...|.++.|++.++..|++++.|+++++||+..++... +..+...+..
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS 317 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc
Confidence 2667889999984499999999999999999998765442 3333333332
Q ss_pred ---EEEcc--CCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 476 ---VCYCP--DGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 476 ---v~~sp--dg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.+|+| ++.++++|+.||.|+|||+.+++...... .+...|++++|+|
T Consensus 318 ~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~--------~~~~~V~svafsp 369 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI--------QLGMPIVDFCWHQ 369 (393)
T ss_dssp SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE--------ECSSCEEEEEECT
T ss_pred ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec--------CCCCcEEEEEEcC
Confidence 33443 34467788899999999999988765432 2346899999987
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=2.7e-20 Score=183.31 Aligned_cols=224 Identities=12% Similarity=-0.003 Sum_probs=150.9
Q ss_pred EEeeecCCeEEEEeCCCCcccccccccceEEcccC-------------------------CCEEEEEEccC----CCEEE
Q 009614 250 LTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHE-------------------------GSILTMKFSLD----GQYLA 300 (531)
Q Consensus 250 lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~-------------------------~~I~~l~fspd----g~~La 300 (531)
++++ ....|++|+..+.. +.....+++.|. ..|+.|+|+|| +++++
T Consensus 57 ~~~~-~~~~v~lw~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~ 131 (356)
T 2w18_A 57 IITA-CEDVVSLWKALDAW----QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLL 131 (356)
T ss_dssp EEEE-ESSEEEEEEESSSS----BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEE
T ss_pred EEEe-ccceEEEcccCCCc----cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEE
Confidence 4445 45889999988752 112223344444 35677777888 88888
Q ss_pred EEeCCCcEEEEEcccCccccce-ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 301 SGGEDGTVRVWKVIEHERLDGF-DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 301 sgs~Dg~I~iWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
+++.+ +++|++.+++.+... .. .+..+.+|+... .++
T Consensus 132 s~g~~--~~v~~l~~g~lv~ss~~g-------------------------------------~d~~V~~~~~s~---dG~ 169 (356)
T 2w18_A 132 KSGNI--KAVLGLTKRRLVSSSGTL-------------------------------------SDQQVEVMTFAE---DGG 169 (356)
T ss_dssp EEEEE--EEEEEETTTEEEEEESSS-------------------------------------TTCEEEEEEECT---TSC
T ss_pred eCCCe--EEEEecCCCcEEEecccC-------------------------------------CCCcEEEEEECC---CCc
Confidence 87754 778888665543321 11 233333333211 123
Q ss_pred ceeEeecCCCCeeEEEEcC---CC-eEEEEeCCCcEEEEECCCCeEEEEee-c---CCceEEEEEeeCCCCEE-------
Q 009614 380 PLHEFQGHSSEVLDLSWSK---NG-FLLSSSADKTVRLWQVGIDRCLRVFS-H---NNYVTSVAFNPVDDNYF------- 444 (531)
Q Consensus 380 ~~~~~~~h~~~I~~l~~sp---~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h---~~~V~sv~fsp~d~~~l------- 444 (531)
.+..+.+|...+..++|++ ++ +|++++.|++|+|||+.++++++++. | ...+.+++|+| ++.++
T Consensus 170 ~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~ 248 (356)
T 2w18_A 170 GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPC 248 (356)
T ss_dssp EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC---
T ss_pred eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCC
Confidence 3566778999999999999 55 99999999999999999999999996 3 34678889999 88876
Q ss_pred -----EEEeCCCeEEEEeCCCCeEEEe------cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeec
Q 009614 445 -----ISGSIDGKVRIWEVRRCQVVDY------TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQ 513 (531)
Q Consensus 445 -----~sgs~Dg~I~Iwd~~~~~~~~~------~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~ 513 (531)
++|+.|++|++||..+++.+.. .+|...+.+. +.++.++++|+.||+|+|||+.+++++.+++.
T Consensus 249 ~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g--- 323 (356)
T 2w18_A 249 AKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTALLPP--- 323 (356)
T ss_dssp ---------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETTTCSEEEEECC---
T ss_pred CcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEEecC---
Confidence 5688999999999999987642 2555554443 34488999999999999999999999887542
Q ss_pred ccccCCCceeeeEEEee
Q 009614 514 GKKKLPGKRITGFQVVK 530 (531)
Q Consensus 514 ~~kk~~~~~It~l~f~p 530 (531)
+. ...+..++|+|
T Consensus 324 -H~---~~vvs~vafSP 336 (356)
T 2w18_A 324 -VS---DQHWSFVKWSG 336 (356)
T ss_dssp -C-----CCCCEEEECS
T ss_pred -CC---CCeEEEEEECC
Confidence 11 12234578876
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=2.2e-20 Score=194.16 Aligned_cols=212 Identities=14% Similarity=0.086 Sum_probs=154.5
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCccc---------ccccccceEEcccCCCEEEEEEccCCCEEE----EEe
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE---------LSSLYTGQEFLAHEGSILTMKFSLDGQYLA----SGG 303 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~---------~~~~~~~~~l~~H~~~I~~l~fspdg~~La----sgs 303 (531)
..+.+++++++.++++|+.++ |+||+....... ...... .....|.+.|++++|+|+|++|| +|+
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQ-GLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCC-CEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCc-cccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 456689999999999998888 889875422110 000001 11234677899999999999999 788
Q ss_pred CCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 304 EDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 304 ~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
.|++|+|||+.++..... ..... -..+..
T Consensus 116 ~d~~v~iwd~~~~~~~~~-----~~~~~----------------------------------------------~~~~~~ 144 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAK-----QQKRP----------------------------------------------FAYHKL 144 (434)
T ss_dssp TEEEEEEEEHHHHHCTTC-----SSCCC----------------------------------------------SEEEEC
T ss_pred CCceEEEEEccccccCCc-----CCcce----------------------------------------------eeeeec
Confidence 999999999865421000 00000 001344
Q ss_pred eecCCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC
Q 009614 384 FQGHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (531)
Q Consensus 384 ~~~h~~~I~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~ 460 (531)
+.+|...|.+++|+|+ + +|++++.|++|++||++++..+... .|...|++++|+| ++++|++|+.||+|++||++.
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~~ 223 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPTL 223 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTTC
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccCC
Confidence 5679999999999998 5 8999999999999999998765443 4889999999999 899999999999999999993
Q ss_pred CeEEEecCC-------CCceEEEEEccCCCEEEEE-eCCCc------EEEEeCCCC
Q 009614 461 CQVVDYTDI-------REIVSAVCYCPDGKGGIVG-TMTGN------CRFYDIKDN 502 (531)
Q Consensus 461 ~~~~~~~~~-------~~~v~~v~~spdg~~l~sg-s~dg~------I~iwd~~~~ 502 (531)
.....+..+ ...|.+++|++++.++++. ..+|. +++|++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 224 QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 322223222 2379999999998877553 34433 899999865
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=7.1e-19 Score=181.73 Aligned_cols=187 Identities=12% Similarity=0.048 Sum_probs=151.0
Q ss_pred CCeEEeeecC------CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCC---cEEEEEcccCc
Q 009614 247 DHELTLGQRM------RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG---TVRVWKVIEHE 317 (531)
Q Consensus 247 g~~lasgs~d------g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg---~I~iWd~~~~~ 317 (531)
+..++.++.+ +.|++||+.... .+.+.+|...|.+++|+|||++|++++.++ .|++||+.+++
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~--------~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~ 214 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN--------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 214 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS--------CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC--------CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc
Confidence 4555555443 799999987422 245778999999999999999999999885 99999997764
Q ss_pred cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEc
Q 009614 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (531)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~s 397 (531)
. ..+..|.+.+.+++|+
T Consensus 215 ~---------------------------------------------------------------~~l~~~~~~~~~~~~s 231 (415)
T 2hqs_A 215 V---------------------------------------------------------------RQVASFPRHNGAPAFS 231 (415)
T ss_dssp E---------------------------------------------------------------EEEECCSSCEEEEEEC
T ss_pred E---------------------------------------------------------------EEeecCCCcccCEEEc
Confidence 2 1234466789999999
Q ss_pred CCC-eEE-EEeCCCc--EEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeC-CC--eEEEEeCCCCeEEEecCCC
Q 009614 398 KNG-FLL-SSSADKT--VRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSI-DG--KVRIWEVRRCQVVDYTDIR 470 (531)
Q Consensus 398 p~~-~l~-s~s~Dg~--V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~-Dg--~I~Iwd~~~~~~~~~~~~~ 470 (531)
|+| .|+ +++.++. |++||+.+++......|...+.+++|+| ++++|++++. ++ .|++||+.+++...+..+.
T Consensus 232 pdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~ 310 (415)
T 2hqs_A 232 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG 310 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCEECCCSS
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCEEEEecCC
Confidence 999 666 6666655 9999999988866666888999999999 9998888876 44 7888899998877666777
Q ss_pred CceEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEE
Q 009614 471 EIVSAVCYCPDGKGGIVGTMT---GNCRFYDIKDNQLY 505 (531)
Q Consensus 471 ~~v~~v~~spdg~~l~sgs~d---g~I~iwd~~~~~l~ 505 (531)
..+..++|+|||++|++++.+ +.|++||+.++++.
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 889999999999999988865 57999999988763
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=8.6e-19 Score=187.24 Aligned_cols=266 Identities=12% Similarity=0.086 Sum_probs=187.3
Q ss_pred ccceeeeCCCCeEEeeecCCeEEEEeC--CCCcccccccccceEEcccCCCEEEEEEcc----CCCEEEEEeC-CCcEEE
Q 009614 238 HGSATLKPGDHELTLGQRMRRVRVHPV--KKQSRELSSLYTGQEFLAHEGSILTMKFSL----DGQYLASGGE-DGTVRV 310 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg~I~vwd~--~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp----dg~~Lasgs~-Dg~I~i 310 (531)
+..++|+|+|+++++++.++.|++||+ .+.. ...++. +...+..++|+| ||++|++++. +++|.|
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-------~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v 252 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-------KVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAI 252 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-------EEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-------EEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEE
Confidence 446889999999999999999999999 4322 233455 345689999999 9999999885 899999
Q ss_pred EEcccCccccceecCCC-----------CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 311 WKVIEHERLDGFDVQDT-----------DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
||..+++.+..+..... .+..+.+.+.... ..+....++.+.+|+.......
T Consensus 253 ~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~---------------~~vs~~~~g~i~vvd~~~~~~l-- 315 (543)
T 1nir_A 253 MDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE---------------FIVNVKETGKVLLVNYKDIDNL-- 315 (543)
T ss_dssp EETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE---------------EEEEETTTTEEEEEECTTSSSC--
T ss_pred EeccccccceeecccCcccCccccccCCceEEEEECCCCCE---------------EEEEECCCCeEEEEEecCCCcc--
Confidence 99999988777654211 1122222222211 1233445667777776543211
Q ss_pred ceeEeecCCCCeeEEEEcCCC-eEEE-EeCCCcEEEEECCCCeEEEEee-----cCCceEEEEEeeCCCCEEEEEe-CCC
Q 009614 380 PLHEFQGHSSEVLDLSWSKNG-FLLS-SSADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGS-IDG 451 (531)
Q Consensus 380 ~~~~~~~h~~~I~~l~~sp~~-~l~s-~s~Dg~V~lwdl~~~~~l~~~~-----h~~~V~sv~fsp~d~~~l~sgs-~Dg 451 (531)
.+..+ .+...+.++.|+|++ +|++ +..+++|.+||+.+++++..+. |......+ ++|..+.+++++. .|+
T Consensus 316 ~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~ 393 (543)
T 1nir_A 316 TVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDG 393 (543)
T ss_dssp EEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSS
T ss_pred eeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCc
Confidence 11122 356678899999999 5554 4568999999999999988875 55444443 5773467777776 589
Q ss_pred eEEEEeCCC-------CeEEE-ecCCCCceEEEEEccCCCEEEEEe-------CCCcEEEEeCCCCeEE-EEeeeeeccc
Q 009614 452 KVRIWEVRR-------CQVVD-YTDIREIVSAVCYCPDGKGGIVGT-------MTGNCRFYDIKDNQLY-QQNQICLQGK 515 (531)
Q Consensus 452 ~I~Iwd~~~-------~~~~~-~~~~~~~v~~v~~spdg~~l~sgs-------~dg~I~iwd~~~~~l~-~~~~~~~~~~ 515 (531)
+|.|||+.+ .+++. +..+...+..|+++|+|++|++++ .+++|.+||+.+++.. ..+.+.--..
T Consensus 394 ~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~ 473 (543)
T 1nir_A 394 SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWAD 473 (543)
T ss_dssp EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHC
T ss_pred eEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcc
Confidence 999999998 77774 666777888999999999999987 3779999999998866 3332211000
Q ss_pred ccCCCceeeeEEEee
Q 009614 516 KKLPGKRITGFQVVK 530 (531)
Q Consensus 516 kk~~~~~It~l~f~p 530 (531)
-..+++++..+.|+|
T Consensus 474 ~~~~~~~~~~~~~~~ 488 (543)
T 1nir_A 474 LGEGAKRVVQPEYNK 488 (543)
T ss_dssp CCSSCCEEEEEEECS
T ss_pred cCCCCCceEeccCCC
Confidence 123357888888886
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=1.6e-17 Score=166.27 Aligned_cols=258 Identities=11% Similarity=0.054 Sum_probs=182.5
Q ss_pred ccccceeeeCCCCeEEeeec-------CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEE-EeCCCc
Q 009614 236 DRHGSATLKPGDHELTLGQR-------MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLAS-GGEDGT 307 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~-------dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Las-gs~Dg~ 307 (531)
..+..++|+|+++++++++. ++.|.+||..+.... ..+. +...+..++|+|+|++++. ...++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~-------~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT-------QAIH-NDLKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE-------EEEE-ESSCCCSEEEETTTTEEEEEETTTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE-------EEEe-cCCCcceEEECCCCCEEEEEecCCCE
Confidence 34456899999998887663 678999998754422 2232 2345788999999996555 455799
Q ss_pred EEEEEcccCccccceecCCCC---------CeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 308 VRVWKVIEHERLDGFDVQDTD---------PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 308 I~iWd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
|.+||+.+++....+...... +..+.+.++... ++.. ....++.+.+|+.....
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~-------------~~~~~~~i~~~d~~~~~--- 175 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT-VYIS-------------GIGKESVIWVVDGGNIK--- 175 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE-EEEE-------------EESSSCEEEEEETTTTE---
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCE-EEEE-------------ecCCCceEEEEcCCCCc---
Confidence 999999999877776654322 233444433321 1111 11235567777765432
Q ss_pred cceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-----cCCceEEEEEeeCCCCEEEEEeC-CC
Q 009614 379 KPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGSI-DG 451 (531)
Q Consensus 379 ~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-----h~~~V~sv~fsp~d~~~l~sgs~-Dg 451 (531)
.+..+..+...+..++|+|++ +|++++.++.|.+||+.+++.+..+. +...+..++|+| +++++++++. ++
T Consensus 176 -~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 176 -LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAA 253 (353)
T ss_dssp -EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSS
T ss_pred -eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCC
Confidence 344455456668899999999 88889999999999999999888775 355688999999 8886666554 59
Q ss_pred eEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 452 KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 452 ~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.|.+||+.+++.+........ ..++|+|+|++++++. .++.|.+||+.+++++..+... ..+.+++|+|
T Consensus 254 ~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~---------~~~~~~~~s~ 323 (353)
T 3vgz_A 254 EVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP---------THPNSLALSA 323 (353)
T ss_dssp EEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC---------SEEEEEEECT
T ss_pred EEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC---------CCCCeEEEcC
Confidence 999999999988754333333 5699999999766655 6899999999999988765431 2456666664
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=5.9e-18 Score=164.07 Aligned_cols=227 Identities=13% Similarity=0.110 Sum_probs=159.6
Q ss_pred eeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEccc-CccccceecCC-CCC
Q 009614 252 LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE-HERLDGFDVQD-TDP 329 (531)
Q Consensus 252 sgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~-~~~~~~~~~~~-~~~ 329 (531)
.++.++.|++|+....... .+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......+. ..+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~--------~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR--------VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE--------EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCCcee--------eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccc
Confidence 3567899999998754422 3556889999999999999999987 78999999988 76554443332 334
Q ss_pred eeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEE-EEeC
Q 009614 330 SCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLL-SSSA 407 (531)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~-s~s~ 407 (531)
..+.|.++....++... . ......++.++... .....+..+ ..+..++|+|++ .|+ ++..
T Consensus 88 ~~~~~spdg~~l~~~~~-~-----------~~~~~~l~~~~~~~-----~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 88 NDHGISPDGALYAISDK-V-----------EFGKSAIYLLPSTG-----GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp SCCEECTTSSEEEEEEC-T-----------TTSSCEEEEEETTC-----CCCEECCSS-SSEEEEEECTTSSEEEEEEEE
T ss_pred cceEECCCCCEEEEEEe-C-----------CCCcceEEEEECCC-----CceEEeecC-CCccceEECCCCCEEEEEECC
Confidence 55666655432222110 0 01223344443322 112333333 348899999999 555 7888
Q ss_pred CCcEEEEEC--CCCeEEEEeecCCceEEEEEeeCCCCEEEEEe-CCCeEEEEeCC--CCeEEEecCCCCceEEEEEccCC
Q 009614 408 DKTVRLWQV--GIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVR--RCQVVDYTDIREIVSAVCYCPDG 482 (531)
Q Consensus 408 Dg~V~lwdl--~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs-~Dg~I~Iwd~~--~~~~~~~~~~~~~v~~v~~spdg 482 (531)
++.++||++ .++.......+...+.+++|+| ++++|+.++ .++.++||++. .+....+..+...+..++|+|+|
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 150 DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp TTEEEEEEEETTTCCEEECCCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS
T ss_pred CCceEEEEEECCCCcceEcccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC
Confidence 999999985 4555555556888999999999 888877666 58899999875 44555677777889999999999
Q ss_pred CEEEEEeCC-----------CcEEEEeCCCCeEEE
Q 009614 483 KGGIVGTMT-----------GNCRFYDIKDNQLYQ 506 (531)
Q Consensus 483 ~~l~sgs~d-----------g~I~iwd~~~~~l~~ 506 (531)
++|++++.+ +.|++||+.+++...
T Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 229 DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred CEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 999988876 569999999887644
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=3.8e-17 Score=162.47 Aligned_cols=265 Identities=12% Similarity=0.134 Sum_probs=165.5
Q ss_pred ccccceeeeCCCCeEEeeecC-CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC-CCcEEEEEc
Q 009614 236 DRHGSATLKPGDHELTLGQRM-RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE-DGTVRVWKV 313 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~d-g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~-Dg~I~iWd~ 313 (531)
..+.+++|+|+|+++++++.+ +.|.+|++......+ .....+..+. .+..++|+|+|++|++++. ++.|.+|++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL---TFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE---EEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce---eeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 455678999999998888776 999999987221111 1122333333 7899999999998877665 889999999
Q ss_pred c---cCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcc-ccccCccee--Eeec-
Q 009614 314 I---EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV-FRLLEKPLH--EFQG- 386 (531)
Q Consensus 314 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~- 386 (531)
. +.+....+... ..+..+.+.++.... + +....++.+.+|+... ..+. ... .+..
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l-~--------------~~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~ 175 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGL-DGCHSANISPDNRTL-W--------------VPALKQDRICLFTVSDDGHLV--AQDPAEVTTV 175 (343)
T ss_dssp ETTEEEEEEEEECCC-TTBCCCEECTTSSEE-E--------------EEEGGGTEEEEEEECTTSCEE--EEEEEEEECS
T ss_pred CCCccccccccccCC-CCceEEEECCCCCEE-E--------------EecCCCCEEEEEEecCCCcee--eecccccccC
Confidence 4 33333333222 223444444433211 1 1112345566666543 1111 111 2222
Q ss_pred CCCCeeEEEEcCCC-eEEE-EeCCCcEEEEECCC--CeE--EEEee-------cCCceEEEEEeeCCCCEEE-EEeCCCe
Q 009614 387 HSSEVLDLSWSKNG-FLLS-SSADKTVRLWQVGI--DRC--LRVFS-------HNNYVTSVAFNPVDDNYFI-SGSIDGK 452 (531)
Q Consensus 387 h~~~I~~l~~sp~~-~l~s-~s~Dg~V~lwdl~~--~~~--l~~~~-------h~~~V~sv~fsp~d~~~l~-sgs~Dg~ 452 (531)
....+..++|+|++ +|+. +..++.|.+|++.. ++. +..+. ....+..++|+| ++++|+ ++..++.
T Consensus 176 ~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 176 EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASL 254 (343)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-CCCEEEEEecCCCE
Confidence 33478899999999 5554 45889999999953 332 22222 123577899999 887776 5557999
Q ss_pred EEEEeCC--CC--eEEEecCCCCceEEEEEccCCCEEEEEe-CCCcEEEE--eCCCCeEEEEeeeeecccccCCCceeee
Q 009614 453 VRIWEVR--RC--QVVDYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFY--DIKDNQLYQQNQICLQGKKKLPGKRITG 525 (531)
Q Consensus 453 I~Iwd~~--~~--~~~~~~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iw--d~~~~~l~~~~~~~~~~~kk~~~~~It~ 525 (531)
|.+||+. ++ +.+........+..++|+|+|++|++++ .++.|.+| |..++++.....+.. +....+
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-------g~~p~~ 327 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-------GQGPMW 327 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-------SSSCCE
T ss_pred EEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-------CCCCee
Confidence 9999998 33 3443333333488999999999988888 58999999 555776544333322 133456
Q ss_pred EEEee
Q 009614 526 FQVVK 530 (531)
Q Consensus 526 l~f~p 530 (531)
++|.|
T Consensus 328 i~~~~ 332 (343)
T 1ri6_A 328 VVVNA 332 (343)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 66654
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=1.1e-18 Score=181.38 Aligned_cols=197 Identities=17% Similarity=0.137 Sum_probs=141.5
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCC
Q 009614 284 EGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSD 363 (531)
Q Consensus 284 ~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (531)
...++.+++++++.+|++++.|+ |+||+....... .......
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~---~~~~~~~---------------------------------- 77 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQ---NKPGDDP---------------------------------- 77 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCC---CCTTCCT----------------------------------
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhh---cccccCc----------------------------------
Confidence 34578999999999999999998 999886432110 0000000
Q ss_pred ceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEE----EEeCCCcEEEEECCCC--------eE---EEEee-
Q 009614 364 LTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLL----SSSADKTVRLWQVGID--------RC---LRVFS- 426 (531)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~----s~s~Dg~V~lwdl~~~--------~~---l~~~~- 426 (531)
..+.. ..+.. ...|...|.+++|+|++ +|+ +++.|++|+|||+.++ +. +..+.
T Consensus 78 ~~~~~---------~~~~~-~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 147 (434)
T 2oit_A 78 NKIVD---------KVQGL-LVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD 147 (434)
T ss_dssp TCEEE---------CCCCE-EECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS
T ss_pred ccccc---------cCccc-cccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCC
Confidence 00000 00011 12367789999999999 777 7888999999998654 22 23333
Q ss_pred cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 427 HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 427 h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
|...|++++|+|.++++|++++.||+|+|||++++..+ ...+|...|++++|+|+|++|++|+.||.|++||++ ++..
T Consensus 148 h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~ 226 (434)
T 2oit_A 148 AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEK 226 (434)
T ss_dssp GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEE
T ss_pred CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccc
Confidence 88999999999944899999999999999999998655 466788899999999999999999999999999998 5555
Q ss_pred EEeeeeecccccCCCceeeeEEEee
Q 009614 506 QQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 506 ~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
..+..+... ...+...|++++|++
T Consensus 227 ~~~~~~~~~-~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 227 KVIPCPPFY-ESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEECCCTTC-CTTSCEEEEEEEEEE
T ss_pred ccccCCccc-CCCCceeEEEEEEec
Confidence 444322110 011234889998875
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.79 E-value=1.8e-17 Score=177.00 Aligned_cols=239 Identities=11% Similarity=0.097 Sum_probs=171.9
Q ss_pred eeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEc--ccCccc
Q 009614 242 TLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV--IEHERL 319 (531)
Q Consensus 242 ~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~--~~~~~~ 319 (531)
+++|++.++++++.++.|.+||...... .+.+..+.. +..++|+|||++|++++.|++|++||+ .+++.+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~-------~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKI-------VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCE-------EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceE-------EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE
Confidence 5889999999999999999999875432 234553322 899999999999999999999999999 788777
Q ss_pred cceecCCCCCeeEEEee----cCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec---------
Q 009614 320 DGFDVQDTDPSCLYFTI----NHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG--------- 386 (531)
Q Consensus 320 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 386 (531)
..+.. ...+..+.+++ +... ++. ....+..+.+|+..... ++..+..
T Consensus 216 ~~i~~-g~~p~~va~sp~~~~dg~~-l~v--------------~~~~~~~v~v~D~~t~~----~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 216 AEIKI-GIEARSVESSKFKGYEDRY-TIA--------------GAYWPPQFAIMDGETLE----PKQIVSTRGMTVDTQT 275 (543)
T ss_dssp EEEEC-CSEEEEEEECCSTTCTTTE-EEE--------------EEEESSEEEEEETTTCC----EEEEEECCEECSSSCC
T ss_pred EEEec-CCCcceEEeCCCcCCCCCE-EEE--------------EEccCCeEEEEeccccc----cceeecccCcccCccc
Confidence 76663 23344555554 3221 111 11224556677655432 2333332
Q ss_pred -CCC-CeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEE--EeecCCceEEEEEeeCCCCEEEEE-eCCCeEEEEeCC
Q 009614 387 -HSS-EVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLR--VFSHNNYVTSVAFNPVDDNYFISG-SIDGKVRIWEVR 459 (531)
Q Consensus 387 -h~~-~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~--~~~h~~~V~sv~fsp~d~~~l~sg-s~Dg~I~Iwd~~ 459 (531)
|.. .+..+.++|++ ++++...++.|.+||+.+.+.+. .+.+...+..+.|+| ++++|+++ ..+++|.+||+.
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETT
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECC-CCCEEEEEecCCCeEEEEECC
Confidence 223 78899999987 77788889999999998876554 556777888999999 88877655 468999999999
Q ss_pred CCeEEEecC-----CCCceEEEEEccC-CCEEEEEe-CCCcEEEEeCCC-------CeEEEEeee
Q 009614 460 RCQVVDYTD-----IREIVSAVCYCPD-GKGGIVGT-MTGNCRFYDIKD-------NQLYQQNQI 510 (531)
Q Consensus 460 ~~~~~~~~~-----~~~~v~~v~~spd-g~~l~sgs-~dg~I~iwd~~~-------~~l~~~~~~ 510 (531)
+++++.... |......+ ++|+ |..++++. .|++|.+||+.+ .+++++++.
T Consensus 355 tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 355 DRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp TTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 999875322 44333333 5777 66667765 589999999998 777777664
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=5.3e-17 Score=161.29 Aligned_cols=242 Identities=9% Similarity=0.122 Sum_probs=163.4
Q ss_pred ceeeeCCCCeEEeeec-CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCC---cEEEEEccc
Q 009614 240 SATLKPGDHELTLGQR-MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG---TVRVWKVIE 315 (531)
Q Consensus 240 s~~fspdg~~lasgs~-dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg---~I~iWd~~~ 315 (531)
.++|+|+|+++++++. ++.|.+||....... ...+..+..++.+++|+|+|++|+++..++ .|.+||+.+
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK------VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCE------EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee------EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 6899999997666554 899999999865431 234556666666699999999999555553 899999999
Q ss_pred CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCce-EEEeCCcccc-ccCcceeEeecCCCCeeE
Q 009614 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLT-CVVLPPKVFR-LLEKPLHEFQGHSSEVLD 393 (531)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~h~~~I~~ 393 (531)
++....+.... .+..+.+.++... ++.... .+.. +.+|+...-. +.... .....+...+..
T Consensus 118 ~~~~~~~~~~~-~~~~~~~spdg~~-l~~~~~--------------~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~ 180 (331)
T 3u4y_A 118 NKFISTIPIPY-DAVGIAISPNGNG-LILIDR--------------SSANTVRRFKIDADGVLFDTG-QEFISGGTRPFN 180 (331)
T ss_dssp TEEEEEEECCT-TEEEEEECTTSSC-EEEEEE--------------TTTTEEEEEEECTTCCEEEEE-EEEECSSSSEEE
T ss_pred CCeEEEEECCC-CccceEECCCCCE-EEEEec--------------CCCceEEEEEECCCCcEeecC-CccccCCCCccc
Confidence 88776665432 3345555554432 222211 1122 3444332100 00000 111234456899
Q ss_pred EEEcCCC-eEE-EEeCCCcEEEEECCCCeE---EEEeecCCceEEEEEeeCCCCEEEEEe-CCCeEEEEeCCCCeE--EE
Q 009614 394 LSWSKNG-FLL-SSSADKTVRLWQVGIDRC---LRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRRCQV--VD 465 (531)
Q Consensus 394 l~~sp~~-~l~-s~s~Dg~V~lwdl~~~~~---l~~~~h~~~V~sv~fsp~d~~~l~sgs-~Dg~I~Iwd~~~~~~--~~ 465 (531)
++|+|+| +|+ ++..++.|.+||+.+++. +..+.....+..++|+| +++++++++ .++.|.+||+.++++ +.
T Consensus 181 ~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEEEEEE
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCceeeec
Confidence 9999999 454 455789999999999888 77777778889999999 898766554 578899999999887 22
Q ss_pred -ecCC----CC---ceEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeEE
Q 009614 466 -YTDI----RE---IVSAVCYCPDGKGGIVGTM-TGNCRFYDIKDNQLY 505 (531)
Q Consensus 466 -~~~~----~~---~v~~v~~spdg~~l~sgs~-dg~I~iwd~~~~~l~ 505 (531)
+... .. ....++|+|||++|++++. ++.|.+||+.+...-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 260 SFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp EEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 1111 11 2356899999998876655 569999999876654
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=2.2e-16 Score=156.83 Aligned_cols=237 Identities=12% Similarity=0.112 Sum_probs=159.8
Q ss_pred eeeCCCCe-EEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC-CCcEEEEEcccCcc-
Q 009614 242 TLKPGDHE-LTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE-DGTVRVWKVIEHER- 318 (531)
Q Consensus 242 ~fspdg~~-lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~-Dg~I~iWd~~~~~~- 318 (531)
.|.+++.+ ++++..++.|.+||....... ..+..+...+ .++|+|+|++|++++. ++.|.+||+.+++.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEIL-------NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEE-------EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccccee-------eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 45565555 677888999999998855432 2344455666 9999999997776665 89999999998876
Q ss_pred ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcC
Q 009614 319 LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK 398 (531)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp 398 (531)
...+........++.+.++....+ ... ..+....+.+|+..... .+..+.. .....+++|+|
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~--~~~-----------~~~~~~~i~v~d~~~~~----~~~~~~~-~~~~~~~~~sp 137 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAV--TVT-----------GLNHPFNMQSYSFLKNK----FISTIPI-PYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEE--ECC-----------CSSSSCEEEEEETTTTE----EEEEEEC-CTTEEEEEECT
T ss_pred EEecccCCCCccceEECCCCCEEE--Eec-----------CCCCcccEEEEECCCCC----eEEEEEC-CCCccceEECC
Confidence 554544433333255544332111 100 00111267788765433 2333433 34568999999
Q ss_pred CC-eEE-EEeCCCc-EEEEECCCCeEE-----EEeecCCceEEEEEeeCCCCEEE-EEeCCCeEEEEeCCCCeE---EEe
Q 009614 399 NG-FLL-SSSADKT-VRLWQVGIDRCL-----RVFSHNNYVTSVAFNPVDDNYFI-SGSIDGKVRIWEVRRCQV---VDY 466 (531)
Q Consensus 399 ~~-~l~-s~s~Dg~-V~lwdl~~~~~l-----~~~~h~~~V~sv~fsp~d~~~l~-sgs~Dg~I~Iwd~~~~~~---~~~ 466 (531)
+| +|+ ++..++. |.+|++.....+ ..+.....+..++|+| ++++++ ++..++.|++||+.+++. +..
T Consensus 138 dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~ 216 (331)
T 3u4y_A 138 NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNA 216 (331)
T ss_dssp TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeee
Confidence 99 454 5556688 999998754332 2334556689999999 888554 455689999999998876 654
Q ss_pred cCCCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCCCeEE
Q 009614 467 TDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKDNQLY 505 (531)
Q Consensus 467 ~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~~~l~ 505 (531)
......+..++|+|||++|+++. .++.|.+||+.++++.
T Consensus 217 ~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~ 256 (331)
T 3u4y_A 217 VGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS 256 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE
T ss_pred ccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee
Confidence 44557788999999999877665 4778999999999883
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=1.7e-17 Score=183.88 Aligned_cols=202 Identities=12% Similarity=0.094 Sum_probs=155.1
Q ss_pred cccceeeeCCCCeEEeeec-CC-----eEEEEeCCCCcccccccccceEEcccC------------------------CC
Q 009614 237 RHGSATLKPGDHELTLGQR-MR-----RVRVHPVKKQSRELSSLYTGQEFLAHE------------------------GS 286 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~-dg-----~I~vwd~~~~~~~~~~~~~~~~l~~H~------------------------~~ 286 (531)
.+.+++|+|||++|++++. ++ .|++|++.++... +.+..|. ..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR-------LLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE-------EEECGGGTC--------------------CCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee-------EccchhhcccccccccchhhhhhhhhhhccccC
Confidence 4567899999999999988 88 9999999865432 1122222 23
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceE
Q 009614 287 ILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (531)
Q Consensus 287 I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (531)
|.+++|+|||++|++++. +.|++||+.++...
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~----------------------------------------------- 142 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA----------------------------------------------- 142 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----------------------------------------------
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----------------------------------------------
Confidence 789999999999999987 89999998765200
Q ss_pred EEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeec-CCc--------------
Q 009614 367 VVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH-NNY-------------- 430 (531)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h-~~~-------------- 430 (531)
....+..|...+..++|+|+| +|++++ ++.|++||+.+++....... ...
T Consensus 143 -------------~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~ 208 (741)
T 2ecf_A 143 -------------AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEM 208 (741)
T ss_dssp -------------SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHS
T ss_pred -------------eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeecc
Confidence 011233456779999999999 777776 56999999999887765542 221
Q ss_pred --eEEEEEeeCCCCEEEEEeCCC---------------------------------eEEEEeCCC-CeEEEec---CCCC
Q 009614 431 --VTSVAFNPVDDNYFISGSIDG---------------------------------KVRIWEVRR-CQVVDYT---DIRE 471 (531)
Q Consensus 431 --V~sv~fsp~d~~~l~sgs~Dg---------------------------------~I~Iwd~~~-~~~~~~~---~~~~ 471 (531)
+.+++|+| |+++|++++.|+ .|++||+.+ ++..... .+..
T Consensus 209 ~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 287 (741)
T 2ecf_A 209 DRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDI 287 (741)
T ss_dssp CCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSE
T ss_pred ccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcce
Confidence 47899999 999999988776 899999998 8765443 4667
Q ss_pred ceEEEEEccCCCEEEEEeC-----CCcEEEEeCCCCeEEEEee
Q 009614 472 IVSAVCYCPDGKGGIVGTM-----TGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~-----dg~I~iwd~~~~~l~~~~~ 509 (531)
.+..++| |||++|++++. ++.|++||+.++++.....
T Consensus 288 ~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 288 YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE
Confidence 8999999 99999998764 5679999999998765544
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=2.4e-17 Score=177.69 Aligned_cols=234 Identities=10% Similarity=-0.004 Sum_probs=164.9
Q ss_pred cccceeeeCCCCeEEeeec-CCeEEEEeCCCCcccccccccceEEcccC-CCEEEEEEccCCCEEEEEeC---CCcEEEE
Q 009614 237 RHGSATLKPGDHELTLGQR-MRRVRVHPVKKQSRELSSLYTGQEFLAHE-GSILTMKFSLDGQYLASGGE---DGTVRVW 311 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~-dg~I~vwd~~~~~~~~~~~~~~~~l~~H~-~~I~~l~fspdg~~Lasgs~---Dg~I~iW 311 (531)
.+.+++|+|||+.||.++. +|+++||++..+.. +.+..|. ..|..++|+|| +++++++. +...+||
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~--------~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET--------VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE--------EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCc--------EeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 4667899999999998876 99999999743221 2244455 68999999999 77887765 5667777
Q ss_pred Eccc--CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 312 KVIE--HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 312 d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
.+.. ......+... .......+.++....++... .. ....+|+.... ....+..+..
T Consensus 94 ~~~~~~~g~~~~l~~~-~~~~~~~~s~dg~~~~~~s~--------------~~-~~~~l~d~~~g-----~~~~l~~~~~ 152 (582)
T 3o4h_A 94 KVNTSRPGEEQRLEAV-KPMRILSGVDTGEAVVFTGA--------------TE-DRVALYALDGG-----GLRELARLPG 152 (582)
T ss_dssp EEETTSTTCCEECTTS-CSBEEEEEEECSSCEEEEEE--------------CS-SCEEEEEEETT-----EEEEEEEESS
T ss_pred EEeccCCCccccccCC-CCceeeeeCCCCCeEEEEec--------------CC-CCceEEEccCC-----cEEEeecCCC
Confidence 6654 2221122111 12234455555443333211 11 22225543321 1222333333
Q ss_pred CeeEEEEcCCC-eEEEEeCC----CcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCC--eEEEEeCCCCe
Q 009614 390 EVLDLSWSKNG-FLLSSSAD----KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDG--KVRIWEVRRCQ 462 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~D----g~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg--~I~Iwd~~~~~ 462 (531)
.+++|+|+| +|++++.+ ..|++||+.+++......|...+..++|+| |+++|+++..++ .|++||+.+++
T Consensus 153 --~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 153 --FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp --CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCC
T ss_pred --ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCc
Confidence 899999999 88877776 789999999988776667888999999999 999999888888 89999999988
Q ss_pred EEEecCCCCceEEEE--------EccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 463 VVDYTDIREIVSAVC--------YCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 463 ~~~~~~~~~~v~~v~--------~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
...+..+...+..++ |+|||.++++++.+|.++||++ ++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 230 VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp EEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE
T ss_pred EEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee
Confidence 775566666666666 9999998999999999999999 6554
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=1.2e-16 Score=158.52 Aligned_cols=239 Identities=11% Similarity=0.062 Sum_probs=167.5
Q ss_pred ccceeeeCCCCeE-EeeecCCeEEEEeCCCCcccccccccceEEc-c----cCCCEEEEEEccCCCEEEEEe--------
Q 009614 238 HGSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFL-A----HEGSILTMKFSLDGQYLASGG-------- 303 (531)
Q Consensus 238 ~~s~~fspdg~~l-asgs~dg~I~vwd~~~~~~~~~~~~~~~~l~-~----H~~~I~~l~fspdg~~Lasgs-------- 303 (531)
+..++|+|+|+++ +++..++.|.+||..+.... ..+. + |...+..++|+|+|++|++++
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 108 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL-------GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELT 108 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCEE-------EEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSS
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeE-------eeEEcCCcccccccccceEECCCCCEEEEEecccccccc
Confidence 4568999999866 45666899999998764432 1121 1 223677899999999998886
Q ss_pred ----CCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 304 ----EDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 304 ----~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
.++.|.+||+.+++....+.. ...+..+.+.++....++. ++.+.+|+.....
T Consensus 109 ~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~------------------~~~i~~~d~~~~~---- 165 (337)
T 1pby_B 109 HFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL------------------GRDLHVMDPEAGT---- 165 (337)
T ss_dssp CEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE------------------SSSEEEEETTTTE----
T ss_pred cccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe------------------CCeEEEEECCCCc----
Confidence 579999999998877666554 2334455555443322111 2346666654432
Q ss_pred ceeEeecCCCCeeEEEEcCCC-eEEEEe-CCC-----------------------cEEEEECCCCeEEEEe---ecCCce
Q 009614 380 PLHEFQGHSSEVLDLSWSKNG-FLLSSS-ADK-----------------------TVRLWQVGIDRCLRVF---SHNNYV 431 (531)
Q Consensus 380 ~~~~~~~h~~~I~~l~~sp~~-~l~s~s-~Dg-----------------------~V~lwdl~~~~~l~~~---~h~~~V 431 (531)
.+..+..+.. ...+.|+|++ .|+..+ .++ .|.+||+.+++.. .+ .+...+
T Consensus 166 ~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~ 243 (337)
T 1pby_B 166 LVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFY 243 (337)
T ss_dssp EEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCE
T ss_pred Eeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCce
Confidence 2223332220 1133678887 443333 222 4689999998875 33 266778
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 432 ~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
.+++|+| ++++++++ ++.|++||+.+++.+........+.+++|+|||++|++++.++.|++||+.+++.+..++..
T Consensus 244 ~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 244 FSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred eeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999999 99998888 79999999999988765555567889999999999999999999999999999998877654
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=2.6e-17 Score=159.44 Aligned_cols=232 Identities=12% Similarity=0.022 Sum_probs=157.7
Q ss_pred eeeeccccceeeeCCCCeEEeeecCCeEEEEeCCC-CcccccccccceEEccc-CCCEEEEEEccCCCEEEEEe--CCCc
Q 009614 232 ARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKK-QSRELSSLYTGQEFLAH-EGSILTMKFSLDGQYLASGG--EDGT 307 (531)
Q Consensus 232 ~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~-~~~~~~~~~~~~~l~~H-~~~I~~l~fspdg~~Lasgs--~Dg~ 307 (531)
..+...+.+++|+|+|+++++++ ++.|++|++.. .... ..+.+| ...|.+++|+|+|++|++++ .++.
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-------KVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE-------ECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce-------EeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 34556677899999999999986 78999999986 4322 123344 46789999999999999998 4456
Q ss_pred EEEEEcc--cCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 308 VRVWKVI--EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 308 I~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
++||.+. ++. ...+.... ....+.|.++....++. ...++.+.+|.... .......+.
T Consensus 110 ~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~---------------~~~~~~~~l~~~~~---~~~~~~~~~ 169 (297)
T 2ojh_A 110 SAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYC---------------GIRDQVFDIYSMDI---DSGVETRLT 169 (297)
T ss_dssp CEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEE---------------EEETTEEEEEEEET---TTCCEEECC
T ss_pred ceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEE---------------ECCCCceEEEEEEC---CCCcceEcc
Confidence 6666653 333 22222221 23333444333222211 12223333443211 122345566
Q ss_pred cCCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECC-CCeEEEEe-ecCCceEEEEEeeCCCCEEEEEeCC-----------
Q 009614 386 GHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVG-IDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSID----------- 450 (531)
Q Consensus 386 ~h~~~I~~l~~sp~~-~l~s~s-~Dg~V~lwdl~-~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~D----------- 450 (531)
.|...+.+++|+|++ .|+.++ .++.+++|++. .+..+..+ .|...+.+++|+| ++++|++++.+
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEE
T ss_pred cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCc
Confidence 788899999999999 666555 58999999886 44444444 4778899999999 99999888766
Q ss_pred CeEEEEeCCCCeEE---EecCCCCceEEEEEccCCCEEEEEeCCC
Q 009614 451 GKVRIWEVRRCQVV---DYTDIREIVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 451 g~I~Iwd~~~~~~~---~~~~~~~~v~~v~~spdg~~l~sgs~dg 492 (531)
+.|++||+.+++.. ....|...+..++|+|+|++|++++.+.
T Consensus 249 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred eEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 56999999987643 3447788899999999999998887654
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=2.3e-16 Score=157.39 Aligned_cols=254 Identities=9% Similarity=0.072 Sum_probs=171.9
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccC-CCEEEEEEccCCCEEE-EEeCCCcEEEEEcccCcc
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHE-GSILTMKFSLDGQYLA-SGGEDGTVRVWKVIEHER 318 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~-~~I~~l~fspdg~~La-sgs~Dg~I~iWd~~~~~~ 318 (531)
+++++++.++++++.++.|++||..+.... +.+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++.
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVY-------KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEE-------EEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEE-------EEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 578889999999999999999998754321 2233332 2578899999998665 555789999999998887
Q ss_pred ccceecCCC------CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCee
Q 009614 319 LDGFDVQDT------DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (531)
Q Consensus 319 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~ 392 (531)
...+..... .+..+.+.++....++... ..... ..........+.+|+....... +.+..+. +...+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-~~~~~---~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~ 151 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN-PTQRL---NDHYVVKPPRLEVFSTADGLEA-KPVRTFP-MPRQVY 151 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE-EEEEC---SSCEEECCCEEEEEEGGGGGGB-CCSEEEE-CCSSCC
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcc-ccccc---ccccccCCCeEEEEECCCcccc-ceeeecc-CCCccc
Confidence 766654321 1445555554432222211 00000 0000111356777776543221 2223333 334688
Q ss_pred EEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCC-------------------------------------------
Q 009614 393 DLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNN------------------------------------------- 429 (531)
Q Consensus 393 ~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~------------------------------------------- 429 (531)
+++|+|++.+++++ +.|.+||+.+++.+..+....
T Consensus 152 ~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 152 LMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp CEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred ceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 99999999544444 349999999988777664211
Q ss_pred --------------------------ceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCC
Q 009614 430 --------------------------YVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (531)
Q Consensus 430 --------------------------~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~ 483 (531)
.+.+++|+|.++++++++ ++.|.+||+.+++.+........+..++|+|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGD 307 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSS
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCC
Confidence 234566667467777777 8899999999999876554555678999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 484 GGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 484 ~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
+|++++.++.|++||+.+++++..++..
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp CEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEEecCCCeEEEEeccccceeeeeecC
Confidence 9999888999999999999998877654
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=4.6e-16 Score=155.91 Aligned_cols=246 Identities=12% Similarity=0.092 Sum_probs=157.7
Q ss_pred ccccceeeeCCCCeEEeeec---CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEe-CCCcEEEE
Q 009614 236 DRHGSATLKPGDHELTLGQR---MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG-EDGTVRVW 311 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~---dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs-~Dg~I~iW 311 (531)
.....++|+|+|+ +++++. ++.|++|++..+... ....+..|...+..++|+|+|++|++++ .++.|.+|
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~-----~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH-----KLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE-----EEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE-----EeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 4455689999999 554443 689999998643321 2223455777899999999999998888 68999999
Q ss_pred EcccC-c--cccceecCCC---------CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCc-cccccC
Q 009614 312 KVIEH-E--RLDGFDVQDT---------DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPK-VFRLLE 378 (531)
Q Consensus 312 d~~~~-~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 378 (531)
++... . .+..+..... .+..+.+.++.. ++. ....+..+.+|+.. ...+
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~--l~v--------------~~~~~~~v~~~~~~~~g~~-- 175 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR--LAV--------------IDLGSDKVYVYNVSDAGQL-- 175 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC--EEE--------------EETTTTEEEEEEECTTSCE--
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc--EEE--------------EeCCCCEEEEEEECCCCcE--
Confidence 99632 2 2222221111 122344443332 222 22233455555544 1111
Q ss_pred cceeEeecC-CCCeeEEEEcCCC-eEEE-EeCCCcEEEEECCC--CeEE--EEee-cC------CceEEEEEeeCCCCEE
Q 009614 379 KPLHEFQGH-SSEVLDLSWSKNG-FLLS-SSADKTVRLWQVGI--DRCL--RVFS-HN------NYVTSVAFNPVDDNYF 444 (531)
Q Consensus 379 ~~~~~~~~h-~~~I~~l~~sp~~-~l~s-~s~Dg~V~lwdl~~--~~~l--~~~~-h~------~~V~sv~fsp~d~~~l 444 (531)
.....+..+ ...+..++|+|+| +|++ +..++.|.+|++.. ++.. ..+. .. ..+..++|+| ++++|
T Consensus 176 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l 254 (347)
T 3hfq_A 176 SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFL 254 (347)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEE
T ss_pred EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEE
Confidence 111222222 2367889999999 4554 56788999999874 5432 2222 11 4588999999 89877
Q ss_pred -EEEeCCCeEEEEeCCC-C--eEE-EecCCCCceEEEEEccCCCEEEEEeCC-CcEEEE--eCCCCeEEE
Q 009614 445 -ISGSIDGKVRIWEVRR-C--QVV-DYTDIREIVSAVCYCPDGKGGIVGTMT-GNCRFY--DIKDNQLYQ 506 (531)
Q Consensus 445 -~sgs~Dg~I~Iwd~~~-~--~~~-~~~~~~~~v~~v~~spdg~~l~sgs~d-g~I~iw--d~~~~~l~~ 506 (531)
+++..++.|.+|++.. + +.+ ....+...+..++|+|||++|++++.+ +.|.+| |..++++..
T Consensus 255 ~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 255 YVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 5566789999999973 2 333 244445668899999999998888765 899999 666777764
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.75 E-value=1.9e-16 Score=157.34 Aligned_cols=189 Identities=13% Similarity=0.170 Sum_probs=136.1
Q ss_pred eEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC-CcEEEEEcc--cCccccceecC
Q 009614 249 ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED-GTVRVWKVI--EHERLDGFDVQ 325 (531)
Q Consensus 249 ~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D-g~I~iWd~~--~~~~~~~~~~~ 325 (531)
++++++.++.|++|++..... .... ....|...+.+++|+|+|++|++++.+ +.|.+|++. ++...
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~------ 75 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGA----LTLT-QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT------ 75 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC----EEEE-EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE------
T ss_pred EEEeCCCCCeEEEEEECCCCc----EEEe-eeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCcee------
Confidence 344557899999999863111 1111 123477789999999999999988886 999999986 32210
Q ss_pred CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEE
Q 009614 326 DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLS 404 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s 404 (531)
.+..+..+. .+..++|+|++ +|++
T Consensus 76 ------------------------------------------------------~~~~~~~~~-~~~~~~~s~dg~~l~~ 100 (343)
T 1ri6_A 76 ------------------------------------------------------FAAESALPG-SLTHISTDHQGQFVFV 100 (343)
T ss_dssp ------------------------------------------------------EEEEEECSS-CCSEEEECTTSSEEEE
T ss_pred ------------------------------------------------------eccccccCC-CCcEEEEcCCCCEEEE
Confidence 011222223 67899999999 6665
Q ss_pred Ee-CCCcEEEEEC---CCCeEEEEeecCCceEEEEEeeCCCCEEEEEe-CCCeEEEEeCCC-CeEE-----E-ecCCCCc
Q 009614 405 SS-ADKTVRLWQV---GIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRR-CQVV-----D-YTDIREI 472 (531)
Q Consensus 405 ~s-~Dg~V~lwdl---~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs-~Dg~I~Iwd~~~-~~~~-----~-~~~~~~~ 472 (531)
++ .++.|.+||+ ...+.+..+.....+.+++|+| +++++++++ .++.|++||+.+ +++. . .......
T Consensus 101 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
T 1ri6_A 101 GSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAG 179 (343)
T ss_dssp EETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCC
T ss_pred EecCCCeEEEEECCCCccccccccccCCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCC
Confidence 55 5889999999 4445556666666799999999 888887777 899999999987 6543 2 2223457
Q ss_pred eEEEEEccCCCEEEEEe-CCCcEEEEeCC--CCeE
Q 009614 473 VSAVCYCPDGKGGIVGT-MTGNCRFYDIK--DNQL 504 (531)
Q Consensus 473 v~~v~~spdg~~l~sgs-~dg~I~iwd~~--~~~l 504 (531)
+..++|+|+|++|++++ .++.|++|++. ++++
T Consensus 180 ~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~ 214 (343)
T 1ri6_A 180 PRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 214 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcE
Confidence 88999999999776555 78999999995 3544
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=3.3e-17 Score=180.86 Aligned_cols=201 Identities=10% Similarity=0.082 Sum_probs=152.5
Q ss_pred ccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCC---CEEEEEEccCCCEEEEEeCC---------
Q 009614 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG---SILTMKFSLDGQYLASGGED--------- 305 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~---~I~~l~fspdg~~Lasgs~D--------- 305 (531)
..+++|+|||+++++ +.||.|++|+..++.. .+.+.+|.. .|.+++|||||++|++++.+
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~-------~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTS-------TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC-------EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcE-------EEEeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence 446899999998776 6899999999876543 233555654 49999999999999999875
Q ss_pred CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
+.|.+||+.+++. ..+ ....
T Consensus 91 ~~i~~~d~~~~~~-~~l-----------------------------------------------------------~~~~ 110 (723)
T 1xfd_A 91 GYYVLSKIPHGDP-QSL-----------------------------------------------------------DPPE 110 (723)
T ss_dssp SEEEEEESSSCCC-EEC-----------------------------------------------------------CCTT
T ss_pred eeEEEEECCCCce-Eec-----------------------------------------------------------cCCc
Confidence 6788999877653 111 1112
Q ss_pred cCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCc------------------eEEEEEeeCCCCEEE
Q 009614 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNY------------------VTSVAFNPVDDNYFI 445 (531)
Q Consensus 386 ~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~------------------V~sv~fsp~d~~~l~ 445 (531)
+|...+..++|+|+| .|+.++. +.|++||+.+++...... +... +.+++|+| |+++|+
T Consensus 111 ~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la 188 (723)
T 1xfd_A 111 VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLA 188 (723)
T ss_dssp CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEE
T ss_pred cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEE
Confidence 355568899999999 8888776 799999999988776654 2332 37899999 999999
Q ss_pred EEeCCC----------------------------------eEEEEeCCCCeE-EEecCC------CCceEEEEEccCCCE
Q 009614 446 SGSIDG----------------------------------KVRIWEVRRCQV-VDYTDI------REIVSAVCYCPDGKG 484 (531)
Q Consensus 446 sgs~Dg----------------------------------~I~Iwd~~~~~~-~~~~~~------~~~v~~v~~spdg~~ 484 (531)
+++.|+ .|++||+.+++. ..+..+ ...+..++|+|||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~ 268 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV 268 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeE
Confidence 987653 799999998874 444433 567899999999998
Q ss_pred EEEEeCC----CcEEEEeCCCCeEEEEe
Q 009614 485 GIVGTMT----GNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 485 l~sgs~d----g~I~iwd~~~~~l~~~~ 508 (531)
|++.... ..|++||+.++++....
T Consensus 269 l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 269 AVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp EEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 8776543 57999999998876544
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.73 E-value=1.6e-15 Score=151.68 Aligned_cols=226 Identities=13% Similarity=0.070 Sum_probs=161.7
Q ss_pred ccceeeeCCCCeEE-eeecCCeEEEEeCCCCcccccccccceEEcccCC---------CEEEEEEccCCCEEEEEe--CC
Q 009614 238 HGSATLKPGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG---------SILTMKFSLDGQYLASGG--ED 305 (531)
Q Consensus 238 ~~s~~fspdg~~la-sgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~---------~I~~l~fspdg~~Lasgs--~D 305 (531)
...++|+|+|++++ ++..++.|.+||..+.... ..+..+.. .+.+++|+|+|++|++++ .+
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK-------GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE-------EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE-------EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 45689999999655 4556799999998765432 22333322 278999999999887776 48
Q ss_pred CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
+.|.+||+.+++....+......+..+.+.++....+ ....++.+.+|+...... +..+.
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~----------------~~~~~~~i~~~d~~~~~~----~~~~~ 223 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLY----------------TTNADGELITIDTADNKI----LSRKK 223 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEE----------------EECTTSEEEEEETTTTEE----EEEEE
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEE----------------EEcCCCeEEEEECCCCeE----EEEEE
Confidence 8999999999888777664444455555555433211 122345666776654332 22332
Q ss_pred ----cCCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEE-eCCCeEEEEeC
Q 009614 386 ----GHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISG-SIDGKVRIWEV 458 (531)
Q Consensus 386 ----~h~~~I~~l~~sp~~-~l~s~s-~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sg-s~Dg~I~Iwd~ 458 (531)
++...+..++|+|++ +++.++ .++.|.+||+.+++.+..+..... ..++|+| ++++++++ ..++.|.+||+
T Consensus 224 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~-dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNP-ARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEET-TTTEEEEEETTTTEEEEEET
T ss_pred cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECC-CCCEEEEEECCCCeEEEEEC
Confidence 355678899999998 555554 559999999999999888874443 5799999 88855554 47899999999
Q ss_pred CCCeEEEecCCCCceEEEEEccCCCEEEEEeCCC
Q 009614 459 RRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 459 ~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg 492 (531)
.+++.+........+..++|+|||++|+++..++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 302 KSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred CCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 9999887666667889999999999888877664
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.72 E-value=3.5e-16 Score=173.21 Aligned_cols=252 Identities=9% Similarity=0.062 Sum_probs=168.3
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
.+.+++|+|||++|++++. +.|++|++...... ....+..|...+..++|+|||++||.++. +.|++||+.++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g 182 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA-----AVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASG 182 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----SCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----eEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCC
Confidence 4567899999999999886 99999999865200 11235567889999999999999999874 68999999887
Q ss_pred ccccceecCCC----------------CCeeEEEeecCCcceeeeecccccc---------------ccccccccC--CC
Q 009614 317 ERLDGFDVQDT----------------DPSCLYFTINHLSQLIPIDVDKEKI---------------DKTKSLRKS--SD 363 (531)
Q Consensus 317 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~--~~ 363 (531)
+.......... ....+.|+++....++......... .......+. ..
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 65433322211 1345666666544333322111000 000000111 12
Q ss_pred ceEEEeCCcc-ccccCcceeEe--ecCCCCeeEEEEcCCC-eEEEEeC-----CCcEEEEECCCCeEEEEeec-C-C---
Q 009614 364 LTCVVLPPKV-FRLLEKPLHEF--QGHSSEVLDLSWSKNG-FLLSSSA-----DKTVRLWQVGIDRCLRVFSH-N-N--- 429 (531)
Q Consensus 364 ~~~~~~~~~~-~~~~~~~~~~~--~~h~~~I~~l~~sp~~-~l~s~s~-----Dg~V~lwdl~~~~~l~~~~h-~-~--- 429 (531)
..+.+|+... ... .... ..|...+..++| |+| .|++++. +..|++||+.++++...+.. . .
T Consensus 263 ~~l~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 263 VKLGVISPAEQAQT----QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP 337 (741)
T ss_dssp EEEEEECSSTTCCC----EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC
T ss_pred eEEEEEECCCCCce----EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC
Confidence 2566666543 221 1111 147788999999 999 6766543 57799999999988877752 2 2
Q ss_pred ceEEEEEeeCCCCEEEEEeCCCeEEEEeCC-CCeEEEecCCCCceEEE-EEccCCCEEEEE-eCCC--cEEEEeCCC
Q 009614 430 YVTSVAFNPVDDNYFISGSIDGKVRIWEVR-RCQVVDYTDIREIVSAV-CYCPDGKGGIVG-TMTG--NCRFYDIKD 501 (531)
Q Consensus 430 ~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~-~~~~~~~~~~~~~v~~v-~~spdg~~l~sg-s~dg--~I~iwd~~~ 501 (531)
.+..++|+| +++++++++.||.++||.+. .++...+..+...+..+ .|+|||+.|+.. +.++ .++||++..
T Consensus 338 ~~~~~~~sp-dg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 338 LHNSLRFLD-DGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CCSCCEECT-TSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred cCCceEECC-CCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 456899999 88899999999987777664 23355677777788887 599999987654 4455 899999864
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.71 E-value=5e-16 Score=178.85 Aligned_cols=240 Identities=5% Similarity=0.052 Sum_probs=174.4
Q ss_pred ceeeeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
+..|...+.++.|+++ .+++++..++.++||.+...... .+.+..|. .+..++|+|||++|+++ .++.|.+
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~------~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~ 269 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKD------LRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYI 269 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCS------CEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEE
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCc------ceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEE
Confidence 3556667778899988 66677888899999986532211 12344454 46778999999999887 4899999
Q ss_pred EEcccCccccceecCC-----------CCCeeEEEe-ecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 311 WKVIEHERLDGFDVQD-----------TDPSCLYFT-INHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
|++... .+..+.... ..+..+.|+ ++....++. ..+.+.+|+....
T Consensus 270 ~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~-----------------~~~~i~~~~~~~~---- 327 (1045)
T 1k32_A 270 FNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV-----------------SRGQAFIQDVSGT---- 327 (1045)
T ss_dssp ECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE-----------------ETTEEEEECTTSS----
T ss_pred ecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEE-----------------EcCEEEEEcCCCC----
Confidence 998433 222332211 123344444 333221111 1345666665432
Q ss_pred cceeEeecCCC-CeeEEEEcCCC-eEEEEeCCCcEE-EEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 379 KPLHEFQGHSS-EVLDLSWSKNG-FLLSSSADKTVR-LWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 379 ~~~~~~~~h~~-~I~~l~~sp~~-~l~s~s~Dg~V~-lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
....+..|.. .+..++|+ +| .|++++.+..+. +||+.+++......|...+..++|+| ++++|++++.++.|++
T Consensus 328 -~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 328 -YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMT 404 (1045)
T ss_dssp -BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred -ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECC-CCCEEEEECCCCeEEE
Confidence 2334566777 89999999 88 888888888888 99998887665556778899999999 9999999999999999
Q ss_pred EeCCCCeEEEec-CCCCceEEEEEccCCCEEEEEeCCC----------cEEEEeCCCCeE
Q 009614 456 WEVRRCQVVDYT-DIREIVSAVCYCPDGKGGIVGTMTG----------NCRFYDIKDNQL 504 (531)
Q Consensus 456 wd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~sgs~dg----------~I~iwd~~~~~l 504 (531)
||+.+++..... .|...+..++|+|||++|++++.++ .|++||+.++++
T Consensus 405 ~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 405 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp EETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred EECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 999999887654 7888899999999999999887754 899999998873
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.71 E-value=1.1e-14 Score=146.66 Aligned_cols=266 Identities=13% Similarity=0.100 Sum_probs=164.8
Q ss_pred ccccceeeeCCCCeEEeeecC----CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEe-CCCcEEE
Q 009614 236 DRHGSATLKPGDHELTLGQRM----RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG-EDGTVRV 310 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~d----g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs-~Dg~I~i 310 (531)
.....++|+|+|++|++++.+ +.|.+|++......+ ........+......+++ ++++|++++ .++.|.+
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~---~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL---HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE---EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE---EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 445568999999999988775 899999887532111 122233445567778888 888887776 5889999
Q ss_pred EEcccCccccceec---CC-----------CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccc-
Q 009614 311 WKVIEHERLDGFDV---QD-----------TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFR- 375 (531)
Q Consensus 311 Wd~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 375 (531)
|++.....+..+.. .. ..+..+.+.++... ++ +....+..+.+|+.....
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~-l~--------------~~~~~~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY-LL--------------ADDLGTDQIHKFNINPNAN 189 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE-EE--------------EEETTTTEEEEEEECTTCC
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE-EE--------------EEeCCCCEEEEEEEcCCCC
Confidence 99976543322210 00 01122333333221 11 112233445555432211
Q ss_pred ------ccCc--ceeEeecCCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECCCCeEE--EEee----cCCceEEEEEeeC
Q 009614 376 ------LLEK--PLHEFQGHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVGIDRCL--RVFS----HNNYVTSVAFNPV 439 (531)
Q Consensus 376 ------~~~~--~~~~~~~h~~~I~~l~~sp~~-~l~s~s-~Dg~V~lwdl~~~~~l--~~~~----h~~~V~sv~fsp~ 439 (531)
+... .......+...+..++|+|+| +|++++ .++.|.+|++.++... ..+. +...+..++|+|
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp- 268 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP- 268 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-
Confidence 1000 011122344567899999999 676666 6899999999877543 2222 334578999999
Q ss_pred CCCEEEEEeC--CCeEEEEeCC--CCe--EEEecCCCCceEEEEEccCCCEEEEEe-CCCcEEEE--eCCCCeEEEEeee
Q 009614 440 DDNYFISGSI--DGKVRIWEVR--RCQ--VVDYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFY--DIKDNQLYQQNQI 510 (531)
Q Consensus 440 d~~~l~sgs~--Dg~I~Iwd~~--~~~--~~~~~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iw--d~~~~~l~~~~~~ 510 (531)
++++|+++.. ++.|.+|++. +++ .+........+..++|+|||++|++++ .++.|.+| |..++++.....
T Consensus 269 dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~- 347 (361)
T 3scy_A 269 DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK- 347 (361)
T ss_dssp TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC-
T ss_pred CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce-
Confidence 9998877665 4899999996 444 332222255778999999999998887 57889996 556777654321
Q ss_pred eecccccCCCceeeeEEEe
Q 009614 511 CLQGKKKLPGKRITGFQVV 529 (531)
Q Consensus 511 ~~~~~kk~~~~~It~l~f~ 529 (531)
..+...++.|.|.
T Consensus 348 ------~~~~~~p~~v~~~ 360 (361)
T 3scy_A 348 ------DIKVDKPVCLKFV 360 (361)
T ss_dssp ------CEECSSEEEEEEE
T ss_pred ------eeeCCCCeEEEEc
Confidence 1122367888875
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.69 E-value=3.6e-15 Score=147.74 Aligned_cols=193 Identities=12% Similarity=0.132 Sum_probs=142.1
Q ss_pred CeEEeeecCCeEEEEeCCCCcccccccccceEEc-ccCC-CEEEEEEccCCCEE-EEEeCCCcEEEEEcccCccccceec
Q 009614 248 HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL-AHEG-SILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHERLDGFDV 324 (531)
Q Consensus 248 ~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~-~H~~-~I~~l~fspdg~~L-asgs~Dg~I~iWd~~~~~~~~~~~~ 324 (531)
.++++++.++.|.+||....... ..+. ++.. .+..++|+|+|++| +++..++.|.+||+.+++....+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVD-------KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEE-------EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEE-------EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 47889999999999998754321 2232 2222 47889999999866 4556688999999987764332211
Q ss_pred CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEE
Q 009614 325 QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLL 403 (531)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~ 403 (531)
... ..|...+..++|+|++ +|+
T Consensus 75 ~~~---------------------------------------------------------~~~~~~~~~~~~s~dg~~l~ 97 (337)
T 1pby_B 75 STP---------------------------------------------------------EERVKSLFGAALSPDGKTLA 97 (337)
T ss_dssp CBT---------------------------------------------------------TEEEECTTCEEECTTSSEEE
T ss_pred CCc---------------------------------------------------------ccccccccceEECCCCCEEE
Confidence 000 0012246688999999 777
Q ss_pred EEe------------CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec-CC-
Q 009614 404 SSS------------ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT-DI- 469 (531)
Q Consensus 404 s~s------------~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~-~~- 469 (531)
+++ .++.|.+||+.+++.+..+.....+.+++|+| ++++|+++ ++.|++||+.+++++... .+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~ 174 (337)
T 1pby_B 98 IYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQS 174 (337)
T ss_dssp EEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTT
T ss_pred EEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccc
Confidence 775 57999999999999888887777788999999 88888777 688999999988765311 11
Q ss_pred -----------------------------------------------------------------CCceEEEEEccCCCE
Q 009614 470 -----------------------------------------------------------------REIVSAVCYCPDGKG 484 (531)
Q Consensus 470 -----------------------------------------------------------------~~~v~~v~~spdg~~ 484 (531)
...+..++|+|||++
T Consensus 175 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 254 (337)
T 1pby_B 175 WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR 254 (337)
T ss_dssp TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCE
Confidence 112446899999999
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 485 GIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 485 l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
|+++ ++.|++||+.+++++..+.
T Consensus 255 l~~~--~~~v~~~d~~~~~~~~~~~ 277 (337)
T 1pby_B 255 AFGA--YNVLESFDLEKNASIKRVP 277 (337)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEE
T ss_pred EEEe--CCeEEEEECCCCcCcceec
Confidence 9888 7999999999998876654
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=1.5e-15 Score=167.56 Aligned_cols=253 Identities=9% Similarity=0.069 Sum_probs=163.4
Q ss_pred ccceeeeCCCCeEEeeecC---------CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 238 HGSATLKPGDHELTLGQRM---------RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~d---------g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
+.+++|+|||++|++++.+ +.|.+||+.++... .+ ....+|...+..++|||||++||.++. +.|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~l---~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i 136 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ--SL---DPPEVSNAKLQYAGWGPKGQQLIFIFE-NNI 136 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE--EC---CCTTCCSCCCSBCCBCSSTTCEEEEET-TEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE--ec---cCCccccccccccEECCCCCEEEEEEC-CeE
Confidence 6678999999999998764 78899999865431 11 112346666899999999999999886 799
Q ss_pred EEEEcccCccccceecCCCCC------------------eeEEEeecCCcceeeeeccccc-ccc-----------cccc
Q 009614 309 RVWKVIEHERLDGFDVQDTDP------------------SCLYFTINHLSQLIPIDVDKEK-IDK-----------TKSL 358 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~ 358 (531)
++|++.+++...........+ ..+.|+++....++........ ... ...+
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY 216 (723)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceec
Confidence 999998877654433322222 4566666654433332211100 000 0000
Q ss_pred ----c--cCCCceEEEeCCccccccCcceeEeec------CCCCeeEEEEcCCC-eEEEEeC----CCcEEEEECCCCeE
Q 009614 359 ----R--KSSDLTCVVLPPKVFRLLEKPLHEFQG------HSSEVLDLSWSKNG-FLLSSSA----DKTVRLWQVGIDRC 421 (531)
Q Consensus 359 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~I~~l~~sp~~-~l~s~s~----Dg~V~lwdl~~~~~ 421 (531)
. ......+.+|+..... ....+.. |...+..++|+|+| +|++.+. +..|++||+.++++
T Consensus 217 ~~~~~G~~~~~~~l~~~d~~~~~----~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 217 HYPKAGSENPSISLHVIGLNGPT----HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp ECCBTTSCCCEEEEEEEESSSSC----CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred cCCCCCCCCCeeEEEEEECCCCc----eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 0 0112366777665432 1233333 36778999999999 6655543 36799999999988
Q ss_pred EEEee--cCCceE----EEEEeeCCCCEEEE--EeCCC------eEEEEe-CCCCe---EEEecCCCCceEE-EEEccCC
Q 009614 422 LRVFS--HNNYVT----SVAFNPVDDNYFIS--GSIDG------KVRIWE-VRRCQ---VVDYTDIREIVSA-VCYCPDG 482 (531)
Q Consensus 422 l~~~~--h~~~V~----sv~fsp~d~~~l~s--gs~Dg------~I~Iwd-~~~~~---~~~~~~~~~~v~~-v~~spdg 482 (531)
...+. +...+. .++|+| +++.|+. +..++ .|.+|| ..+++ ...+......+.. ++|+|||
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg 371 (723)
T 1xfd_A 293 TKKHEDESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKG 371 (723)
T ss_dssp EEEEEEECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTT
T ss_pred eEEEEeccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCC
Confidence 77653 444443 889999 8886654 45677 577788 45555 4444444444554 6999999
Q ss_pred CEEEEEeCC---CcEEEEeCCC
Q 009614 483 KGGIVGTMT---GNCRFYDIKD 501 (531)
Q Consensus 483 ~~l~sgs~d---g~I~iwd~~~ 501 (531)
+.|+..+.+ +.++||++..
T Consensus 372 ~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 372 NKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp TEEEEEESSSCTTCCEEEEECS
T ss_pred CEEEEEEcCCCCcceEEEEEeC
Confidence 999876665 7899999864
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.68 E-value=7e-15 Score=161.92 Aligned_cols=243 Identities=14% Similarity=0.105 Sum_probs=160.6
Q ss_pred ccccceeeeCCCCeEEeeecCCeEEEEeCCC-----CcccccccccceEEcccCC--------------CEEEEEEccCC
Q 009614 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKK-----QSRELSSLYTGQEFLAHEG--------------SILTMKFSLDG 296 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~dg~I~vwd~~~-----~~~~~~~~~~~~~l~~H~~--------------~I~~l~fspdg 296 (531)
..+.+++|+|||++|+.+ .++.|++|++.. +.... ....+.. .+.++.|+|||
T Consensus 121 ~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~-------~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg 192 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIA-------VTIDGTETLVYGQAVHQREFGIEKGTFWSPKG 192 (706)
T ss_dssp TCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEE-------SCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred ccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEE-------eccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence 456678999999999985 689999999986 33211 1112222 25899999999
Q ss_pred CEEEEEe---------------------------------CCCcEEEEEcccCccccceec--CCCCCeeEEEeecCCcc
Q 009614 297 QYLASGG---------------------------------EDGTVRVWKVIEHERLDGFDV--QDTDPSCLYFTINHLSQ 341 (531)
Q Consensus 297 ~~Lasgs---------------------------------~Dg~I~iWd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 341 (531)
++|++++ .+..|.+||+.+++....... +...+..+.|+++....
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 272 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENIL 272 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEE
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEE
Confidence 9999997 446799999988775333221 12223344555444322
Q ss_pred eeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee--cCCC---CeeEEEEcC--CC-eEEEEeCCCcEEE
Q 009614 342 LIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ--GHSS---EVLDLSWSK--NG-FLLSSSADKTVRL 413 (531)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~---~I~~l~~sp--~~-~l~s~s~Dg~V~l 413 (531)
++. ..+. ......+.+|+..... ....+. .+.. .+..++|+| +| +|++++.|+.++|
T Consensus 273 ~~~-~~~~----------~~~~~~v~~~d~~~g~----~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l 337 (706)
T 2z3z_A 273 YVA-EVNR----------AQNECKVNAYDAETGR----FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL 337 (706)
T ss_dssp EEE-EECT----------TSCEEEEEEEETTTCC----EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred EEE-EeCC----------CCCeeEEEEEECCCCc----eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence 221 1110 1122356666654421 111111 1222 346789999 99 8888889999999
Q ss_pred EECC-CCeEEEEee-cCCceEE-EEEeeCCCCEEEEEe-CCC----eEEEEeCCCCeEEEecCCCCceEEEEEccCCCEE
Q 009614 414 WQVG-IDRCLRVFS-HNNYVTS-VAFNPVDDNYFISGS-IDG----KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGG 485 (531)
Q Consensus 414 wdl~-~~~~l~~~~-h~~~V~s-v~fsp~d~~~l~sgs-~Dg----~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l 485 (531)
|++. ++..+..+. +...+.. ++|+| +++.|+.++ .++ .|..||+.+++...+. +...+..++|+|||++|
T Consensus 338 ~~~~~~~~~~~~l~~~~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~spdg~~l 415 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTKGEWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDIKGGKTKDLT-PESGMHRTQLSPDGSAI 415 (706)
T ss_dssp EEEETTSCEEEECCCSSSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEETTCCCCEESC-CSSSEEEEEECTTSSEE
T ss_pred EEEECCCCEEEecCCCCeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCCCceecc-CCCceEEEEECCCCCEE
Confidence 9876 566666664 6667776 79999 887766554 444 6778888877644433 66779999999999998
Q ss_pred EEEeCC----CcEEEEeCCCCe
Q 009614 486 IVGTMT----GNCRFYDIKDNQ 503 (531)
Q Consensus 486 ~sgs~d----g~I~iwd~~~~~ 503 (531)
+.+..+ +.|++||+.+++
T Consensus 416 ~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 416 IDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEECSSCSCEEEEEESSSCE
T ss_pred EEEecCCCCCcEEEEEECCCCe
Confidence 877554 459999999887
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.67 E-value=1.9e-15 Score=173.93 Aligned_cols=195 Identities=9% Similarity=0.054 Sum_probs=163.0
Q ss_pred eccccceeee-CCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCC-CEEEEEEccCCCEEEEEeCCCcEE-EE
Q 009614 235 IDRHGSATLK-PGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG-SILTMKFSLDGQYLASGGEDGTVR-VW 311 (531)
Q Consensus 235 ~~~~~s~~fs-pdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~-~I~~l~fspdg~~Lasgs~Dg~I~-iW 311 (531)
...+.+++|+ |+|+++++++ ++.|.+|+...... ..+..|.. .+..++|+ ||+.|++++.++.|. +|
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~ 364 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV--------LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIY 364 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE--------EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEE
T ss_pred ccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce--------EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEE
Confidence 3457789999 9999999887 78999999875432 12456777 89999999 999999999887777 88
Q ss_pred EcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCe
Q 009614 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (531)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I 391 (531)
++.+++. ..+.+|...+
T Consensus 365 d~~~~~~---------------------------------------------------------------~~l~~~~~~~ 381 (1045)
T 1k32_A 365 DYRTGKA---------------------------------------------------------------EKFEENLGNV 381 (1045)
T ss_dssp ETTTCCE---------------------------------------------------------------EECCCCCCSE
T ss_pred ECCCCCc---------------------------------------------------------------eEecCCccce
Confidence 8754421 1122566789
Q ss_pred eEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEeCCC----------eEEEEeCC
Q 009614 392 LDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDG----------KVRIWEVR 459 (531)
Q Consensus 392 ~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~Dg----------~I~Iwd~~ 459 (531)
..++|+|+| +|++++.++.|++||+.+++....+ .|...+.+++|+| |+++|++++.++ .|++||+.
T Consensus 382 ~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 382 FAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred eeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 999999999 9999999999999999999988887 5888999999999 999998887654 89999999
Q ss_pred CCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 460 RCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 460 ~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
+++...+..+...+..++|+|||++|++++.++...+|+.....
T Consensus 461 ~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~ 504 (1045)
T 1k32_A 461 GRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 504 (1045)
T ss_dssp TTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSC
T ss_pred CCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccc
Confidence 99977788888889999999999999999998888888876443
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.67 E-value=1.7e-15 Score=166.78 Aligned_cols=211 Identities=12% Similarity=0.101 Sum_probs=150.6
Q ss_pred ccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEccc
Q 009614 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~ 315 (531)
..+.+++|+|| ..++.+ .++.|++||+..+.. ..+..|...+.+++|+|||++||++ .|+.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~--------~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKV--------TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEE--------EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCce--------EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence 34667899999 666555 459999999975432 1344567789999999999999985 679999999987
Q ss_pred -----CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 316 -----HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 316 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
++........... +.+.. + ....+...
T Consensus 151 ~~~~~g~~~~~~~~~~~~--------------------------------------~~~g~--------~--~~~ee~~~ 182 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTET--------------------------------------LVYGQ--------A--VHQREFGI 182 (706)
T ss_dssp TTSCCCCCEESCSCCBTT--------------------------------------EEESS--------C--CGGGCTTC
T ss_pred ccccCCCcEEeccCCCCC--------------------------------------eEccc--------c--hhhhhcCC
Confidence 5432211100000 00000 0 11223456
Q ss_pred eeEEEEcCCC-eEEEEe---------------------------------CCCcEEEEECCCCeEEEEe---ecCCceEE
Q 009614 391 VLDLSWSKNG-FLLSSS---------------------------------ADKTVRLWQVGIDRCLRVF---SHNNYVTS 433 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s---------------------------------~Dg~V~lwdl~~~~~l~~~---~h~~~V~s 433 (531)
+.++.|+|+| +|++++ .+..|++||+.+++..... .|...+.+
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 7899999999 888877 4577999999998876655 36678999
Q ss_pred EEEeeCCCCEEEEEeCCC-----eEEEEeCCCC-eEEEec--CCC---CceEEEEEcc--CCCEEEEEeCCCcEEEEeCC
Q 009614 434 VAFNPVDDNYFISGSIDG-----KVRIWEVRRC-QVVDYT--DIR---EIVSAVCYCP--DGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 434 v~fsp~d~~~l~sgs~Dg-----~I~Iwd~~~~-~~~~~~--~~~---~~v~~v~~sp--dg~~l~sgs~dg~I~iwd~~ 500 (531)
++|+| ++++|++++.++ .|++||+.++ ....+. .+. ..+..++|+| ||++|+++..+|.++||.+.
T Consensus 263 ~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 263 LSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred EEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 99999 999999988776 9999999998 443322 222 1346789999 99999999999999999876
Q ss_pred -CCeEEE
Q 009614 501 -DNQLYQ 506 (531)
Q Consensus 501 -~~~l~~ 506 (531)
+++.+.
T Consensus 342 ~~~~~~~ 348 (706)
T 2z3z_A 342 TTGRLIR 348 (706)
T ss_dssp TTSCEEE
T ss_pred CCCCEEE
Confidence 454443
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.66 E-value=4.2e-14 Score=142.44 Aligned_cols=256 Identities=13% Similarity=0.142 Sum_probs=153.2
Q ss_pred CCCCeEEeee----cCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC----CcEEEEEccc-
Q 009614 245 PGDHELTLGQ----RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED----GTVRVWKVIE- 315 (531)
Q Consensus 245 pdg~~lasgs----~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D----g~I~iWd~~~- 315 (531)
+...++++|+ .++.|.+|.+......+. ....+ |...+..++|+|+|++|++++.+ +.|.+|++..
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~---~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESL---PLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEE---EEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEE---Eeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC
Confidence 3344555553 457899998764322221 11222 66778889999999999999886 8999999876
Q ss_pred -Ccc--ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE--e------
Q 009614 316 -HER--LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE--F------ 384 (531)
Q Consensus 316 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------ 384 (531)
++. +.........+..+.+ ....++.. ...++.+.+|+............. .
T Consensus 86 ~g~~~~~~~~~~~~~~p~~~~~---dg~~l~~~--------------~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~ 148 (361)
T 3scy_A 86 KGTLHLLNTQKTMGADPCYLTT---NGKNIVTA--------------NYSGGSITVFPIGQDGALLPASDVIEFKGSGPD 148 (361)
T ss_dssp TTEEEEEEEEECSSSCEEEEEE---CSSEEEEE--------------ETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSC
T ss_pred CCcEEEeeEeccCCCCcEEEEE---CCCEEEEE--------------ECCCCEEEEEEeCCCCcCcccceeEEccCCCCC
Confidence 332 1122212222222222 21222221 223445555554321111111111 1
Q ss_pred --ecCCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECCCCe-------E-------EEEeecCCceEEEEEeeCCCCEEEE
Q 009614 385 --QGHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVGIDR-------C-------LRVFSHNNYVTSVAFNPVDDNYFIS 446 (531)
Q Consensus 385 --~~h~~~I~~l~~sp~~-~l~s~s-~Dg~V~lwdl~~~~-------~-------l~~~~h~~~V~sv~fsp~d~~~l~s 446 (531)
..+...+.+++|+|+| +|++++ .++.|.+|++.... . .....+...+..++|+| +++++++
T Consensus 149 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v 227 (361)
T 3scy_A 149 KERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYL 227 (361)
T ss_dssp TTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEE
T ss_pred ccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEE
Confidence 1123346889999999 555544 58999999987543 1 12223556788999999 9988877
Q ss_pred Ee-CCCeEEEEeCCCCeEEE---e---cCCCCceEEEEEccCCCEEEEEeCC--CcEEEEeCC--CCeEEEEeeeeeccc
Q 009614 447 GS-IDGKVRIWEVRRCQVVD---Y---TDIREIVSAVCYCPDGKGGIVGTMT--GNCRFYDIK--DNQLYQQNQICLQGK 515 (531)
Q Consensus 447 gs-~Dg~I~Iwd~~~~~~~~---~---~~~~~~v~~v~~spdg~~l~sgs~d--g~I~iwd~~--~~~l~~~~~~~~~~~ 515 (531)
++ .++.|.+|++.++++.. . ..+...+..++|+|||++|+++..+ +.|.+|++. ++++.....+..
T Consensus 228 ~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--- 304 (361)
T 3scy_A 228 INEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--- 304 (361)
T ss_dssp EETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC---
T ss_pred EcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC---
Confidence 76 68999999999876532 1 2233557899999999998776654 889999995 555433222221
Q ss_pred ccCCCceeeeEEEee
Q 009614 516 KKLPGKRITGFQVVK 530 (531)
Q Consensus 516 kk~~~~~It~l~f~p 530 (531)
+..+.+++|+|
T Consensus 305 ----g~~~~~~~~sp 315 (361)
T 3scy_A 305 ----GIHPRNFIITP 315 (361)
T ss_dssp ----SSCCCEEEECT
T ss_pred ----CCCCceEEECC
Confidence 23455666665
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.65 E-value=8.3e-15 Score=148.77 Aligned_cols=252 Identities=10% Similarity=-0.004 Sum_probs=157.9
Q ss_pred eeeeCCCCeEEeeec-CC--eEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc
Q 009614 241 ATLKPGDHELTLGQR-MR--RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (531)
Q Consensus 241 ~~fspdg~~lasgs~-dg--~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~ 317 (531)
.+|+|||++|+.++. ++ .|.+|+....... +...+|...+..+.|+|||+.|+.++.++.|++||+.+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~-------~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT-------QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE-------ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE-------EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 689999999998876 67 4777887654322 2234555556677899999999999999999999999887
Q ss_pred cccceecCCCCCeeEEEeecCCcceee-eecccccc-------ccccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 318 RLDGFDVQDTDPSCLYFTINHLSQLIP-IDVDKEKI-------DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
.......+........+..+.....+. ........ .............+++++.... ....+..+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-----~~~~l~~~~~ 188 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG-----ESTVILQENQ 188 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC-----CEEEEEEESS
T ss_pred ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC-----ceEEeecCCc
Confidence 654444333322222232222222222 11110000 0000122344566777776542 2344555677
Q ss_pred CeeEEEEcC-CC-eEEEEeCC------CcEEEEECCCCeEEEEeecC--CceEEEEEeeCCCCEEEEEeC-CC----eEE
Q 009614 390 EVLDLSWSK-NG-FLLSSSAD------KTVRLWQVGIDRCLRVFSHN--NYVTSVAFNPVDDNYFISGSI-DG----KVR 454 (531)
Q Consensus 390 ~I~~l~~sp-~~-~l~s~s~D------g~V~lwdl~~~~~l~~~~h~--~~V~sv~fsp~d~~~l~sgs~-Dg----~I~ 454 (531)
.+..++|+| +| .|+.+..+ ..|.++|+.++.......+. ..+..++|+| +++.|+..+. ++ .|+
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVP-DGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECT-TSSCEEEEEEETTCCCEEEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECC-CCCEEEEEecCCCCCcceEE
Confidence 899999999 88 77666653 37888888776554444444 3588899999 8887655443 22 399
Q ss_pred EEeCCCCeEEEecCCCCc------eEEEEEccCCCEEEEE---------eCCCcEEEEeCCCCeEE
Q 009614 455 IWEVRRCQVVDYTDIREI------VSAVCYCPDGKGGIVG---------TMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 455 Iwd~~~~~~~~~~~~~~~------v~~v~~spdg~~l~sg---------s~dg~I~iwd~~~~~l~ 505 (531)
+||+.+++...+...... ...++|+|||+.|+.. ..+..|++||+.++++.
T Consensus 268 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (388)
T 3pe7_A 268 SADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH 333 (388)
T ss_dssp EECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE
T ss_pred EEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE
Confidence 999999875433222110 1123799999988764 44668999999988764
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.62 E-value=2.1e-14 Score=145.25 Aligned_cols=243 Identities=11% Similarity=0.049 Sum_probs=153.4
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCC-CCcccccccccceEEcccCCCEEEEEEccCCCE--EEEEe----------
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVK-KQSRELSSLYTGQEFLAHEGSILTMKFSLDGQY--LASGG---------- 303 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~-~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~--Lasgs---------- 303 (531)
.+..++|+|+|++|++++.+ .|.+|++. .+... . ......+ +.+.+++|+|+|++ ++++.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~--~---~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIV--H---EASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEE--E---EEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEE--E---eeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 34568999999999988887 99999986 33211 0 0011111 23556899999994 55553
Q ss_pred ---CCCcEEEEEccc-Cccccceec----CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCc-cc
Q 009614 304 ---EDGTVRVWKVIE-HERLDGFDV----QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPK-VF 374 (531)
Q Consensus 304 ---~Dg~I~iWd~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 374 (531)
.+|.+.+|++.. ++....+.. ....+..+.+.++... ++.. ...+..+.+|+.. ..
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~~~--------------~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY-LYSA--------------DLTANKLWTHRKLASG 178 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-EEEE--------------ETTTTEEEEEEECTTS
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-EEEE--------------cCCCCEEEEEEECCCC
Confidence 689999999973 544333321 1223444444444321 1111 1123455566543 21
Q ss_pred cccCcceeEee--cCCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECC--CCeEE---EEee--------cCC------ce
Q 009614 375 RLLEKPLHEFQ--GHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVG--IDRCL---RVFS--------HNN------YV 431 (531)
Q Consensus 375 ~~~~~~~~~~~--~h~~~I~~l~~sp~~-~l~s~s-~Dg~V~lwdl~--~~~~l---~~~~--------h~~------~V 431 (531)
.+ ..+..+. .|...+..++|+|+| +|++++ .++.|.+|++. +++.. ..+. |.. .+
T Consensus 179 ~~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 256 (365)
T 1jof_A 179 EV--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYR 256 (365)
T ss_dssp CE--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEE
T ss_pred CE--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccccc
Confidence 11 1122233 245678999999999 777666 47899999875 45542 1221 121 58
Q ss_pred EEEE-EeeCCCCEEEEEeCC-C-----eEEEEeCC-CCeEEE----ecCCCCceEEEEEcc---CCCEEEEEeCC-CcEE
Q 009614 432 TSVA-FNPVDDNYFISGSID-G-----KVRIWEVR-RCQVVD----YTDIREIVSAVCYCP---DGKGGIVGTMT-GNCR 495 (531)
Q Consensus 432 ~sv~-fsp~d~~~l~sgs~D-g-----~I~Iwd~~-~~~~~~----~~~~~~~v~~v~~sp---dg~~l~sgs~d-g~I~ 495 (531)
..++ |+| ++++|+++..+ . .|.+|++. ++++.. ...+...+..++|+| ||++|++++.+ +.|+
T Consensus 257 ~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 257 ADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp EEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred ccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 8999 999 99988776543 2 89999996 566543 222445567899999 89999999875 8999
Q ss_pred EEeCCCCeE
Q 009614 496 FYDIKDNQL 504 (531)
Q Consensus 496 iwd~~~~~l 504 (531)
+|++....+
T Consensus 336 v~~~~~~~l 344 (365)
T 1jof_A 336 IYRWKDEFL 344 (365)
T ss_dssp EEEEETTEE
T ss_pred EEEEchhhC
Confidence 999987644
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.61 E-value=2e-14 Score=154.81 Aligned_cols=202 Identities=10% Similarity=0.037 Sum_probs=135.6
Q ss_pred cCCCEEEEEEccCCCEEEEEeC-CCcEEEEEcccCccccceecCC-CCCeeEEEeecCCcceeeeecccccccccccccc
Q 009614 283 HEGSILTMKFSLDGQYLASGGE-DGTVRVWKVIEHERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRK 360 (531)
Q Consensus 283 H~~~I~~l~fspdg~~Lasgs~-Dg~I~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (531)
+..+|++++|+|||++||+++. ||+++||++.+++.. .+..+. ..+....|+++ ..++...... +
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd--~~l~~~~~~~----------g 86 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG--RVILVRDVSK----------G 86 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS--EEEEEEECST----------T
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC--eEEEEeccCC----------C
Confidence 3568999999999999999887 999999998665533 222222 22233333322 1111111100 0
Q ss_pred CCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEee
Q 009614 361 SSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNP 438 (531)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp 438 (531)
.....++.++. +.. .... .+.. ...+...+|+|++ .+++++.++.+.+||+.+++......+.. .+++|+|
T Consensus 87 ~~~~~l~~~~~--~~~-g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~sp 159 (582)
T 3o4h_A 87 AEQHALFKVNT--SRP-GEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDI 159 (582)
T ss_dssp SCCEEEEEEET--TST-TCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEE
T ss_pred CcceEEEEEec--cCC-Cccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECC
Confidence 01112222222 000 0111 1221 2234466788877 44444555556699999998777766555 8899999
Q ss_pred CCCCEEEEEeCC----CeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCC--cEEEEeCCCCeEE
Q 009614 439 VDDNYFISGSID----GKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTG--NCRFYDIKDNQLY 505 (531)
Q Consensus 439 ~d~~~l~sgs~D----g~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg--~I~iwd~~~~~l~ 505 (531)
|+++|++++.+ +.|++||+.+++...+..+...+..++|+|||++|+++..+| .|++||+.++++.
T Consensus 160 -DG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 160 -RGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp -ETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred -CCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 99999988877 789999999998888888889999999999999999888888 8999999988876
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=8.7e-14 Score=139.22 Aligned_cols=210 Identities=11% Similarity=0.160 Sum_probs=137.1
Q ss_pred cCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC---CCcEEEEEcccCccccceecCCCCCee
Q 009614 255 RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE---DGTVRVWKVIEHERLDGFDVQDTDPSC 331 (531)
Q Consensus 255 ~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~---Dg~I~iWd~~~~~~~~~~~~~~~~~~~ 331 (531)
.++.|.+|.+......+... ....+...+..++|+|+|+ |++++. ++.|.+|++.++...
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~----~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~------------ 76 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTND----GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH------------ 76 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEE----EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE------------
T ss_pred CCCCEEEEEEcCCCCeEEEe----eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE------------
Confidence 35678888876432222111 2234556788899999999 555544 689999998655420
Q ss_pred EEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEe-CCC
Q 009614 332 LYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSS-ADK 409 (531)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s-~Dg 409 (531)
.+..+..+...+..++|+|++ +|++++ .++
T Consensus 77 ------------------------------------------------~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~ 108 (347)
T 3hfq_A 77 ------------------------------------------------KLNTVVAPGTPPAYVAVDEARQLVYSANYHKG 108 (347)
T ss_dssp ------------------------------------------------EEEEEEEESCCCSEEEEETTTTEEEEEETTTT
T ss_pred ------------------------------------------------EeeeeecCCCCCEEEEECCCCCEEEEEeCCCC
Confidence 122233456678899999999 777777 789
Q ss_pred cEEEEECCC-C--eEEEEeecC----------CceEEEEEeeCCCCEEEEEeCCCeEEEEeCC-CCeEEE----ecCCCC
Q 009614 410 TVRLWQVGI-D--RCLRVFSHN----------NYVTSVAFNPVDDNYFISGSIDGKVRIWEVR-RCQVVD----YTDIRE 471 (531)
Q Consensus 410 ~V~lwdl~~-~--~~l~~~~h~----------~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~-~~~~~~----~~~~~~ 471 (531)
.|.+|++.. + ..+..+.+. ..+.+++|+| +++++++...++.|++|++. ++++.. ......
T Consensus 109 ~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 109 TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 999999963 2 333333322 2488999999 88877777778999999998 554432 122334
Q ss_pred ceEEEEEccCCCEEEE-EeCCCcEEEEeCCC--CeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 472 IVSAVCYCPDGKGGIV-GTMTGNCRFYDIKD--NQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 472 ~v~~v~~spdg~~l~s-gs~dg~I~iwd~~~--~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.+..++|+|||++|++ +..++.|++|++.. +++.....+............+.+++|+|
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 6788999999997666 45688999999874 65533222221111111124567777765
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.60 E-value=3.7e-15 Score=164.55 Aligned_cols=193 Identities=12% Similarity=0.115 Sum_probs=142.0
Q ss_pred ceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCC---CEEEEEEccCCCEEEEEeC---------CCc
Q 009614 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG---SILTMKFSLDGQYLASGGE---------DGT 307 (531)
Q Consensus 240 s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~---~I~~l~fspdg~~Lasgs~---------Dg~ 307 (531)
.++|+|+|.+++++ .++.|++|+...+... +.+.+|.. .|.+++|||||++||+++. ++.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~-------~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSY-------TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEE-------EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEE-------EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 57999999666555 6999999999865432 22334433 4899999999999999876 789
Q ss_pred EEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecC
Q 009614 308 VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH 387 (531)
Q Consensus 308 I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 387 (531)
|++||+.+++.+... .+
T Consensus 92 i~~~d~~~g~~~~~~------------------------------------------------------------~l--- 108 (719)
T 1z68_A 92 YYIYDLSNGEFVRGN------------------------------------------------------------EL--- 108 (719)
T ss_dssp EEEEETTTTEECCSS------------------------------------------------------------CC---
T ss_pred EEEEECCCCccccce------------------------------------------------------------ec---
Confidence 999999877631100 00
Q ss_pred CCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCce-----------------EEEEEeeCCCCEEEEE
Q 009614 388 SSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYV-----------------TSVAFNPVDDNYFISG 447 (531)
Q Consensus 388 ~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V-----------------~sv~fsp~d~~~l~sg 447 (531)
...+..++|+|+| .|+.+. ++.|++||+.+++...... +...| .+++|+| |+++|+++
T Consensus 109 ~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~ 186 (719)
T 1z68_A 109 PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYA 186 (719)
T ss_dssp CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEE
T ss_pred CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEE
Confidence 1347789999999 777775 7899999999887765432 22222 4899999 99999998
Q ss_pred eCCC----------------------------------eEEEEeCCCCeEE---E------ecCCCCceEEEEEccCCCE
Q 009614 448 SIDG----------------------------------KVRIWEVRRCQVV---D------YTDIREIVSAVCYCPDGKG 484 (531)
Q Consensus 448 s~Dg----------------------------------~I~Iwd~~~~~~~---~------~~~~~~~v~~v~~spdg~~ 484 (531)
+.|. .|++||+.+++.. . +..+...+..++|+||+++
T Consensus 187 ~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~ 266 (719)
T 1z68_A 187 EFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERV 266 (719)
T ss_dssp EEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEE
T ss_pred EECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeE
Confidence 8653 7899999987642 2 2357778999999999887
Q ss_pred EEEEeCC----CcEEEEe----CCCCeEE
Q 009614 485 GIVGTMT----GNCRFYD----IKDNQLY 505 (531)
Q Consensus 485 l~sgs~d----g~I~iwd----~~~~~l~ 505 (531)
+++.... ..|++|| +.+++..
T Consensus 267 ~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 267 CLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp EEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred EEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 7775433 2488899 7777654
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=1.4e-14 Score=160.77 Aligned_cols=192 Identities=10% Similarity=0.073 Sum_probs=141.7
Q ss_pred ccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCC-----CEEEEEEccCCCEEEEEeCC-------
Q 009614 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG-----SILTMKFSLDGQYLASGGED------- 305 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~-----~I~~l~fspdg~~Lasgs~D------- 305 (531)
..++.|+|||.+++++ ++.|++|++.++... +.+.+|.. ....+.|||||++|+.++.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS-------VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEE-------EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceE-------EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEc
Confidence 3468999999999887 899999999866532 23445543 33458899999999999876
Q ss_pred --CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE
Q 009614 306 --GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (531)
Q Consensus 306 --g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
+.+.+||+.+++.. .
T Consensus 90 ~~~~~~~~d~~~~~~~---------------------------------------------------------------~ 106 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLI---------------------------------------------------------------T 106 (740)
T ss_dssp EEEEEEEEETTTTEEC---------------------------------------------------------------C
T ss_pred cceEEEEEECCCCcEE---------------------------------------------------------------E
Confidence 45568888776521 1
Q ss_pred eecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCce-----------------EEEEEeeCCCCE
Q 009614 384 FQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYV-----------------TSVAFNPVDDNY 443 (531)
Q Consensus 384 ~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V-----------------~sv~fsp~d~~~ 443 (531)
+..|.+.+...+|+|+| .|+.+ .++.|++|++.++...+... +...+ ..+.|+| |+++
T Consensus 107 l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~ 184 (740)
T 4a5s_A 107 EERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTF 184 (740)
T ss_dssp SSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSE
T ss_pred cccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCE
Confidence 23456678999999999 77776 46899999999887655332 22222 3589999 9999
Q ss_pred EEEEeCCC------------------------------------eEEEEeCCC---C---eEEEecC------CCCceEE
Q 009614 444 FISGSIDG------------------------------------KVRIWEVRR---C---QVVDYTD------IREIVSA 475 (531)
Q Consensus 444 l~sgs~Dg------------------------------------~I~Iwd~~~---~---~~~~~~~------~~~~v~~ 475 (531)
||.++.|. +|+|||+.+ + +...+.. +...+..
T Consensus 185 la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (740)
T 4a5s_A 185 LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCD 264 (740)
T ss_dssp EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEE
T ss_pred EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEE
Confidence 99875332 588899998 7 5555443 6778999
Q ss_pred EEEccCCCEEEEEeC----CCcEEEEeCCCCe
Q 009614 476 VCYCPDGKGGIVGTM----TGNCRFYDIKDNQ 503 (531)
Q Consensus 476 v~~spdg~~l~sgs~----dg~I~iwd~~~~~ 503 (531)
++|+|||+.++.... +..|++||+.+++
T Consensus 265 ~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 265 VTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 999999997766543 3369999999887
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.59 E-value=6.1e-13 Score=129.24 Aligned_cols=242 Identities=10% Similarity=0.125 Sum_probs=158.2
Q ss_pred eeccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEE-ccCCCEEEEEeC-CCcEEEE
Q 009614 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKF-SLDGQYLASGGE-DGTVRVW 311 (531)
Q Consensus 234 ~~~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~f-spdg~~Lasgs~-Dg~I~iW 311 (531)
+.....++++++++.++++...++.|.+|+...... ..+.....-.+|...+.++++ .++++++++... ++.|.+|
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~--~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFK--FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEE--EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEE--EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 334556789999999888888899999999763221 111000001235567899999 467776666643 8899999
Q ss_pred EcccCccccceecCC-CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee--cCC
Q 009614 312 KVIEHERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ--GHS 388 (531)
Q Consensus 312 d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~ 388 (531)
+ .+++.+..+.... ..+..+.+.++ ..++. ....+..+.+|+... +.+..+. .+.
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~--g~l~v--------------~~~~~~~i~~~~~~g-----~~~~~~~~~~~~ 163 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNK--GRIIV--------------VECKVMRVIIFDQNG-----NVLHKFGCSKHL 163 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTT--SCEEE--------------EETTTTEEEEECTTS-----CEEEEEECTTTC
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCC--CCEEE--------------EECCCCEEEEEcCCC-----CEEEEeCCCCcc
Confidence 9 5565554443221 12233333222 22222 222344566666432 2233332 345
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeec---CCceEEEEEeeCCCCEEEEEeCCC-eEEEEeCCCCeE
Q 009614 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH---NNYVTSVAFNPVDDNYFISGSIDG-KVRIWEVRRCQV 463 (531)
Q Consensus 389 ~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h---~~~V~sv~fsp~d~~~l~sgs~Dg-~I~Iwd~~~~~~ 463 (531)
..+..|++++++ ++++...++.|++||. .++.+..+.. ...+..|+++| +++++++...++ .|.+||.....+
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~ 241 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLI 241 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEE
T ss_pred CCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEE
Confidence 678999999999 6666677899999997 4556666643 36789999999 889888888886 999999764443
Q ss_pred EEecCC--CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q 009614 464 VDYTDI--REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 464 ~~~~~~--~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~ 502 (531)
..+..+ ...+.+++++|+|+++++ +.++.|++|++...
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 333332 234789999999987666 67999999998653
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.57 E-value=1e-13 Score=137.96 Aligned_cols=196 Identities=10% Similarity=0.083 Sum_probs=136.9
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCC-CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEE
Q 009614 289 TMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCV 367 (531)
Q Consensus 289 ~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (531)
++++++++.++++++.++.|.+||+.+++....+.... ..+..+.+.++... ++ +....++.+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-~~--------------v~~~~~~~i~ 68 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRT-AY--------------VLNNHYGDIY 68 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSE-EE--------------EEETTTTEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCE-EE--------------EEeCCCCcEE
Confidence 45688889999999999999999999988777766543 13444444443321 11 1223455677
Q ss_pred EeCCccccccCcceeEeecC------CCCeeEEEEcCCC-eEEEEeCC------------CcEEEEECCCC---eEEEEe
Q 009614 368 VLPPKVFRLLEKPLHEFQGH------SSEVLDLSWSKNG-FLLSSSAD------------KTVRLWQVGID---RCLRVF 425 (531)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h------~~~I~~l~~sp~~-~l~s~s~D------------g~V~lwdl~~~---~~l~~~ 425 (531)
+|+..... .+..+..+ ...+..++|+|+| +|++++.+ +.|.+||+.++ +.+..+
T Consensus 69 ~~d~~t~~----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 69 GIDLDTCK----NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp EEETTTTE----EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred EEeCCCCc----EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 77765432 23333322 2347899999999 78877755 89999999884 344556
Q ss_pred ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCC-----------------------------------
Q 009614 426 SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIR----------------------------------- 470 (531)
Q Consensus 426 ~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~----------------------------------- 470 (531)
.+...+.+++|+| +++ +++++. .|.+||+.+++.+......
T Consensus 145 ~~~~~~~~~~~s~-dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T 1jmx_B 145 PMPRQVYLMRAAD-DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 220 (349)
T ss_dssp ECCSSCCCEEECT-TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred cCCCcccceeECC-CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence 6667799999999 888 555543 4999999988766422111
Q ss_pred ----------------------------------CceEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 471 ----------------------------------EIVSAVCYCP-DGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 471 ----------------------------------~~v~~v~~sp-dg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
..+..++|+| ||++++++ ++.|++||+.+++++..+.
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 292 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN 292 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc
Confidence 1345677889 99999888 8899999999998877654
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.53 E-value=3.7e-13 Score=136.59 Aligned_cols=253 Identities=8% Similarity=-0.037 Sum_probs=152.6
Q ss_pred cccceeeeCCCCeEEeeecC---CeEEEEeCCCCcccccccccceEEcccCCC-EEEEEEccCCCEEEEEeCCCcEEEEE
Q 009614 237 RHGSATLKPGDHELTLGQRM---RRVRVHPVKKQSRELSSLYTGQEFLAHEGS-ILTMKFSLDGQYLASGGEDGTVRVWK 312 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~d---g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~-I~~l~fspdg~~Lasgs~Dg~I~iWd 312 (531)
.+..++|+|||++|+..... ..|.+|+....... .+..+... ...+.|+|||++|+.++.++.|.+|+
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~--------~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d 108 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV--------QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVD 108 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE--------ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE--------EeecCCCCccccceECCCCCEEEEEEcCCcEEEEE
Confidence 35668999999998876443 47888887754321 12222223 33478999999999999999999999
Q ss_pred cccCccccceecCCCCCee-EEEeecCCccee-------eeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 313 VIEHERLDGFDVQDTDPSC-LYFTINHLSQLI-------PIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
+.+++.......+...... ..+......... .+..+...+.............+++|+..... ...+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~-----~~~~ 183 (396)
T 3c5m_A 109 LETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE-----LEVI 183 (396)
T ss_dssp TTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC-----EEEE
T ss_pred CCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc-----EEee
Confidence 9887654333322210000 000000000000 00000000000000011345567777654422 2333
Q ss_pred ecCCCCeeEEEEcC-CC-eEEEEeCC------CcEEEEECCCCeEEEEeec--CCceEEEEEeeCCCCEEEEEeCC----
Q 009614 385 QGHSSEVLDLSWSK-NG-FLLSSSAD------KTVRLWQVGIDRCLRVFSH--NNYVTSVAFNPVDDNYFISGSID---- 450 (531)
Q Consensus 385 ~~h~~~I~~l~~sp-~~-~l~s~s~D------g~V~lwdl~~~~~l~~~~h--~~~V~sv~fsp~d~~~l~sgs~D---- 450 (531)
..+...+..+.|+| ++ .|+..+.+ ..|.+||+.+++......+ ...+..++|+| ++++|+.++.+
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~ 262 (396)
T 3c5m_A 184 HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQT 262 (396)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT-TSSCEEEEEEETTTC
T ss_pred ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC-CCCEEEEEecCCCCc
Confidence 35677899999999 67 56665543 4688999877654444443 23588899999 88877776544
Q ss_pred -CeEEEEeCCCCeEEEecCCCCceEEEEEcc-CCCEEEEEe----------------CCCcEEEEeCCCCeEE
Q 009614 451 -GKVRIWEVRRCQVVDYTDIREIVSAVCYCP-DGKGGIVGT----------------MTGNCRFYDIKDNQLY 505 (531)
Q Consensus 451 -g~I~Iwd~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~sgs----------------~dg~I~iwd~~~~~l~ 505 (531)
+.|++||+.+++...+..... .. +.|+| ||++|++++ .++.|++||+.++++.
T Consensus 263 ~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 263 DRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp CEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC
T ss_pred cceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE
Confidence 459999999887654433222 33 89999 999888765 2468999999888753
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.53 E-value=6.6e-12 Score=124.98 Aligned_cols=238 Identities=11% Similarity=0.081 Sum_probs=161.6
Q ss_pred ccccceeeeCCCCeEEeeecC------------------------CeEEEEeCCCCcccccccccceEE-cccCCCEEEE
Q 009614 236 DRHGSATLKPGDHELTLGQRM------------------------RRVRVHPVKKQSRELSSLYTGQEF-LAHEGSILTM 290 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~d------------------------g~I~vwd~~~~~~~~~~~~~~~~l-~~H~~~I~~l 290 (531)
..+.+++++|+|+++++...+ +.|.+||..++... ..+ .++-.....|
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~-------~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL-------QSSGKNLFYLPHGL 96 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE-------EEECTTTCSSEEEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE-------eccCCCccCCceEE
Confidence 456678999999999888777 47999988654421 112 2445678999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcccCc-cccceec---------CCCCCeeEEEeecCCcceeeeecccccccccccccc
Q 009614 291 KFSLDGQYLASGGEDGTVRVWKVIEHE-RLDGFDV---------QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRK 360 (531)
Q Consensus 291 ~fspdg~~Lasgs~Dg~I~iWd~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (531)
+++++|+++++...++.|++|+..... .+..+.. ....+..+.+.+. ...++..+.
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~------------- 162 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDG------------- 162 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEEC-------------
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeC-------------
Confidence 999999988888889999999975442 3333311 1112223333221 122222211
Q ss_pred CCCceEEEeCCccccccCcceeEee----------cCCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEee--
Q 009614 361 SSDLTCVVLPPKVFRLLEKPLHEFQ----------GHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-- 426 (531)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~I~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-- 426 (531)
..+..+.+|+.. ...+..+. ++......|+++|+ + ++++...++.|++||..+++.+..+.
T Consensus 163 ~~~~~I~~~~~~-----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 163 YCNSRIVQFSPS-----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp SSCCEEEEECTT-----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred CCCCeEEEEcCC-----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 134455555532 12222222 12334889999998 6 67777788999999999899988884
Q ss_pred -cCCceEEEEEeeCCCCEEEEEe-------CCCeEEEEeCCCCeEEEec----CCCCceEEEEEccCCCEEEEEeCCCcE
Q 009614 427 -HNNYVTSVAFNPVDDNYFISGS-------IDGKVRIWEVRRCQVVDYT----DIREIVSAVCYCPDGKGGIVGTMTGNC 494 (531)
Q Consensus 427 -h~~~V~sv~fsp~d~~~l~sgs-------~Dg~I~Iwd~~~~~~~~~~----~~~~~v~~v~~spdg~~l~sgs~dg~I 494 (531)
+...+..++|+| +..+++.+ .+..|++|++.+++++... .+...+..|+++|+|.++++...++.|
T Consensus 238 ~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 238 SFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp TTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred ccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 556788999998 33333332 3458999999999988653 566679999999999888888889999
Q ss_pred EEEeCCC
Q 009614 495 RFYDIKD 501 (531)
Q Consensus 495 ~iwd~~~ 501 (531)
++|++..
T Consensus 316 ~~~~~~~ 322 (329)
T 3fvz_A 316 WKFTLTE 322 (329)
T ss_dssp EEEEEEE
T ss_pred EEEeCCc
Confidence 9999764
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.52 E-value=2.2e-13 Score=150.35 Aligned_cols=253 Identities=10% Similarity=0.022 Sum_probs=160.6
Q ss_pred ccceeeeCCCCeEEeeec---------CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcE
Q 009614 238 HGSATLKPGDHELTLGQR---------MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~---------dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I 308 (531)
+.+++|+|||++|+.++. ++.|++||+.++..... . .+ ...+..++|||||++||.+. |+.|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~--~---~l---~~~~~~~~~SPDG~~la~~~-~~~i 132 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG--N---EL---PRPIQYLCWSPVGSKLAYVY-QNNI 132 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS--S---CC---CSSBCCEEECSSTTCEEEEE-TTEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc--e---ec---CcccccceECCCCCEEEEEE-CCeE
Confidence 557899999999998876 78999999986543100 0 11 24688999999999999986 7899
Q ss_pred EEEEcccCccccceecCCC------------------CCeeEEEeecCCcceeeeecccc-ccc---------------c
Q 009614 309 RVWKVIEHERLDGFDVQDT------------------DPSCLYFTINHLSQLIPIDVDKE-KID---------------K 354 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------~ 354 (531)
++|++.+++.......... ....+.|+++....++....... ... .
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI 212 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceee
Confidence 9999988765432211111 11356666665443332221110 000 0
Q ss_pred ccccc--cCCCceEEEeCCcccccc----CcceeEeecCCCCeeEEEEcCCC-eEEEEeCC----CcEEEEE----CCCC
Q 009614 355 TKSLR--KSSDLTCVVLPPKVFRLL----EKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD----KTVRLWQ----VGID 419 (531)
Q Consensus 355 ~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~D----g~V~lwd----l~~~ 419 (531)
.+... ......+.+|+....... -.....+.+|...+..++|+|++ ++++.... ..|.+|| +.++
T Consensus 213 ~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp ECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred cCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 00000 112335667776543321 00002244688889999999999 55554332 2488999 8887
Q ss_pred eEEEEe-----ecCCceE-----EEEEeeCCCCEEEE--EeCCC--eEEEEeCCCCeEEEecCCCCceEEEEEccCCCEE
Q 009614 420 RCLRVF-----SHNNYVT-----SVAFNPVDDNYFIS--GSIDG--KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGG 485 (531)
Q Consensus 420 ~~l~~~-----~h~~~V~-----sv~fsp~d~~~l~s--gs~Dg--~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l 485 (531)
++...+ .|...+. .+.|+| +++.|+. +..+| .|.+||+.+++...+..+...+..+.+. +++.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i 370 (719)
T 1z68_A 293 DCPKTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSL 370 (719)
T ss_dssp ECCGGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEE
T ss_pred ceEEEEecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEE
Confidence 766555 3566666 889999 8875443 44555 6788888887766666666678887777 88888
Q ss_pred EEEeCC-----CcEEEEeCCC
Q 009614 486 IVGTMT-----GNCRFYDIKD 501 (531)
Q Consensus 486 ~sgs~d-----g~I~iwd~~~ 501 (531)
+..+.+ +.+++|.+..
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEecCCCCCceEEEEEEeC
Confidence 777665 7888998753
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.52 E-value=2.1e-12 Score=130.47 Aligned_cols=255 Identities=11% Similarity=0.019 Sum_probs=153.0
Q ss_pred ceeeeCCCCeEEeee----------cCCeEEEEeCCCCcccccccccceEEcc------cCCCEEEEEEccCCCEEEEEe
Q 009614 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTGQEFLA------HEGSILTMKFSLDGQYLASGG 303 (531)
Q Consensus 240 s~~fspdg~~lasgs----------~dg~I~vwd~~~~~~~~~~~~~~~~l~~------H~~~I~~l~fspdg~~Lasgs 303 (531)
.++|+|||++++++. .++.|.+||..+... .+++.. +......++|+|||++|+++.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-------~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-------EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-------EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-------EEEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence 589999999998875 367899999874332 222221 234567899999999999886
Q ss_pred C--CCcEEEEEcccCccccc-eecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcc-cccc--
Q 009614 304 E--DGTVRVWKVIEHERLDG-FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV-FRLL-- 377 (531)
Q Consensus 304 ~--Dg~I~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 377 (531)
. +++|.+||+.+++.+.. +..... ..+.+.+.....++.. +.++.+..+.... ....
T Consensus 127 ~~~~~~v~v~d~~~~~~~~~~i~~~~~--~~v~~~p~~~~~~~~~---------------~~dg~~~~v~~~~~g~~~~~ 189 (361)
T 2oiz_A 127 ASPATSIGIVDVAKGDYVEDVTAAAGC--WSVIPQPNRPRSFMTI---------------CGDGGLLTINLGEDGKVASQ 189 (361)
T ss_dssp ESSSEEEEEEETTTTEEEEEEGGGTTE--EEEEECTTSSSEEEEE---------------ETTSSEEEEEECTTSSEEEE
T ss_pred CCCCCeEEEEECCCCcEEEEEecCCCc--ceeEEcCCCCeeEEEE---------------CCCCcEEEEEECCCCcEeee
Confidence 4 68999999999887665 443211 0011222111111111 1122222211100 0000
Q ss_pred CcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCe--EEEEeec-----------CCceEEEEEeeCCCCE
Q 009614 378 EKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDR--CLRVFSH-----------NNYVTSVAFNPVDDNY 443 (531)
Q Consensus 378 ~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~--~l~~~~h-----------~~~V~sv~fsp~d~~~ 443 (531)
......+..+..++ .+..++++ .++..+.++.|.++|+.... .+..+.. .....-++|+| +++.
T Consensus 190 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~ 267 (361)
T 2oiz_A 190 SRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGR 267 (361)
T ss_dssp EECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTE
T ss_pred ccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCe
Confidence 00001111222222 23335666 66667788999999997553 2222210 11112378999 7776
Q ss_pred EEEEeC-----------CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCC--eEEEEeee
Q 009614 444 FISGSI-----------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDN--QLYQQNQI 510 (531)
Q Consensus 444 l~sgs~-----------Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~--~l~~~~~~ 510 (531)
++++.. .+.|.+||+.+++++....... +..++|+|||++|++++. +.|.+||+.++ +++..+.
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~- 344 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE- 344 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET-
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec-
Confidence 666543 3489999999999886443334 999999999999999887 99999999999 7765431
Q ss_pred eecccccCCCceeeeEEEee
Q 009614 511 CLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 511 ~~~~~kk~~~~~It~l~f~p 530 (531)
..++.-.+|.|.|
T Consensus 345 -------~~G~~P~~~~~~p 357 (361)
T 2oiz_A 345 -------GAAEASLQVQFHP 357 (361)
T ss_dssp -------TSCSSEEEEEECC
T ss_pred -------cCCCCcEEEEecC
Confidence 1234456677766
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.50 E-value=1.6e-13 Score=152.21 Aligned_cols=203 Identities=12% Similarity=0.123 Sum_probs=131.9
Q ss_pred ceeeeCCCCeEEeeecC---------CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 240 SATLKPGDHELTLGQRM---------RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 240 s~~fspdg~~lasgs~d---------g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
..+|||||++|+.++.+ +.+.+||+.++... .+..|.+.+..++|||||+.||.+. |+.|.+
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~ 136 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYV 136 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--------CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEE
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--------EcccCCCcceeeEECCCCCEEEEEE-CCeEEE
Confidence 36899999999998876 56679999865432 2456778899999999999999884 689999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC--
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS-- 388 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-- 388 (531)
|++.++...+ +....... ..+.++.
T Consensus 137 ~~~~~~~~~~-lt~~g~~~----------------------------------------------------~~~~g~~~~ 163 (740)
T 4a5s_A 137 KIEPNLPSYR-ITWTGKED----------------------------------------------------IIYNGITDW 163 (740)
T ss_dssp ESSTTSCCEE-CCSCCBTT----------------------------------------------------TEEESBCCH
T ss_pred EECCCCceEE-EcCCCCcc----------------------------------------------------ceecCcccc
Confidence 9998776322 11000000 0001111
Q ss_pred -------CCeeEEEEcCCC-eEEEEeC------------------------------------CCcEEEEECCC---C--
Q 009614 389 -------SEVLDLSWSKNG-FLLSSSA------------------------------------DKTVRLWQVGI---D-- 419 (531)
Q Consensus 389 -------~~I~~l~~sp~~-~l~s~s~------------------------------------Dg~V~lwdl~~---~-- 419 (531)
+....+.|+|+| .|+.++. ..+|++||+.+ +
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 111234444444 3433321 12588999998 7
Q ss_pred -eEEEEee------cCCceEEEEEeeCCCCEEEEEeC----CCeEEEEeCCCCe----EE---Ee--cCCCCceE-----
Q 009614 420 -RCLRVFS------HNNYVTSVAFNPVDDNYFISGSI----DGKVRIWEVRRCQ----VV---DY--TDIREIVS----- 474 (531)
Q Consensus 420 -~~l~~~~------h~~~V~sv~fsp~d~~~l~sgs~----Dg~I~Iwd~~~~~----~~---~~--~~~~~~v~----- 474 (531)
+...... |...+..++|+| |+++++.... +..|++||+.+++ +. .+ ..+...|.
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~ 322 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPS 322 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCC
T ss_pred ceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCC
Confidence 4444332 777899999999 8886665432 3479999998876 22 11 33444443
Q ss_pred EEEEccCCCEEE-EEeC-CC--cEEEEeCCCCeEE
Q 009614 475 AVCYCPDGKGGI-VGTM-TG--NCRFYDIKDNQLY 505 (531)
Q Consensus 475 ~v~~spdg~~l~-sgs~-dg--~I~iwd~~~~~l~ 505 (531)
.+.|+|||+.|+ ..+. +| .|++||+.+++..
T Consensus 323 ~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 323 EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp CCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE
T ss_pred CceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE
Confidence 688999999887 6654 44 5888888776543
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.48 E-value=1.7e-11 Score=119.72 Aligned_cols=246 Identities=11% Similarity=0.029 Sum_probs=158.7
Q ss_pred ccceeeeCCCC-eEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 238 HGSATLKPGDH-ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 238 ~~s~~fspdg~-~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
..+++|+|+|+ +++++..++.|..|+.... . +.+..+...+.+++++++|+++++...++.|.+||..++
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~--------~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L--------SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E--------EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e--------EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 34689999998 7788888999999998754 1 234557778999999999998887777889999999777
Q ss_pred ccccceecC----CCCCeeEEEeecCCcceeeeecccccccc---ccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 317 ERLDGFDVQ----DTDPSCLYFTINHLSQLIPIDVDKEKIDK---TKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 317 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
+........ ...+..+.+.+ .+.++..+........ .........+.++.++.. . .+..+..+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~--~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-----~~~~~~~~~~ 172 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAP--DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-----TLSAPIRDRV 172 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECT--TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-----CEEEEECCCS
T ss_pred cEEEEeeccCCCCCCCCCCEEECC--CCCEEEECCccccccccccccccccCCCcEEEEECCC-C-----CEEEeecCCC
Confidence 643221111 11122233332 2223322110000000 000001112345555543 1 1333455667
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECC-CCeE---EEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeE
Q 009614 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVG-IDRC---LRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV 463 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~-~~~~---l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~ 463 (531)
....++|+|++ .|++.+.++.|.+|++. ++.. ...+. +...+.+|++++ +++++++. ++.|.+||......
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPDGDEL 249 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTTSCEE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCCCCEE
Confidence 78899999999 66777788999999997 4544 23332 445677899999 88877666 88999999974433
Q ss_pred EEecCCCCceEEEEE-ccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 464 VDYTDIREIVSAVCY-CPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 464 ~~~~~~~~~v~~v~~-spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
..+..+.. +++++| .|+++.|++++.++ +.-+++.+.++.
T Consensus 250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~~ 290 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGLE 290 (296)
T ss_dssp EEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBCC
T ss_pred EEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccccc
Confidence 34555555 899999 68999999988764 556677666553
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.46 E-value=1e-12 Score=143.42 Aligned_cols=210 Identities=11% Similarity=0.014 Sum_probs=143.1
Q ss_pred ceeeeccccceeeeCCCCeEEee--ecCCeEEEEeCCCCcccccccccceEEcccCCCEE---------EEEEc--cCCC
Q 009614 231 MARIIDRHGSATLKPGDHELTLG--QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSIL---------TMKFS--LDGQ 297 (531)
Q Consensus 231 ~~~~~~~~~s~~fspdg~~lasg--s~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~---------~l~fs--pdg~ 297 (531)
+..+...+..+++++++-+++.+ ..++...||....... .+.+..|...+. ...|+ |||+
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA-------EESALPAPWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC-------EEESSCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC-------cceeCCCCccccccccccCCccceeeeecCCC
Confidence 33445566678899887666666 5688999998632211 123445555555 55665 9999
Q ss_pred E-EEEEeC-CCcEEEEEcc--c-CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCc
Q 009614 298 Y-LASGGE-DGTVRVWKVI--E-HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPK 372 (531)
Q Consensus 298 ~-Lasgs~-Dg~I~iWd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (531)
+ |+.++. +..|.+|++. . +. ...+..
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~------------------------------------------------ 122 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTP------------------------------------------------ 122 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCC-CEECSC------------------------------------------------
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCC-CEeccC------------------------------------------------
Confidence 8 776654 4555555543 1 21 110000
Q ss_pred cccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCC----------CcEEEEECCC------CeEEEEe-ecCCceEEE
Q 009614 373 VFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD----------KTVRLWQVGI------DRCLRVF-SHNNYVTSV 434 (531)
Q Consensus 373 ~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~D----------g~V~lwdl~~------~~~l~~~-~h~~~V~sv 434 (531)
.....|...+..++|+|+| .|++++.+ ..|++||+.+ +...... .+...+..+
T Consensus 123 ---------~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 193 (662)
T 3azo_A 123 ---------VSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGP 193 (662)
T ss_dssp ---------CCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCC
T ss_pred ---------CccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCc
Confidence 0000145567899999999 88888776 5899999988 6666555 566788899
Q ss_pred EEeeCCCCEEEEEeCC--------CeEEEEeCC-CC---eEEEecC-CCCceEEEEEccCCCEEEEEeCCC--cEEEEeC
Q 009614 435 AFNPVDDNYFISGSID--------GKVRIWEVR-RC---QVVDYTD-IREIVSAVCYCPDGKGGIVGTMTG--NCRFYDI 499 (531)
Q Consensus 435 ~fsp~d~~~l~sgs~D--------g~I~Iwd~~-~~---~~~~~~~-~~~~v~~v~~spdg~~l~sgs~dg--~I~iwd~ 499 (531)
+|+| |+++|+.++.+ ..|++||+. ++ +...+.. +...+..++|+|||++++++..+| .|++||+
T Consensus 194 ~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 194 RLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp EECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECT
T ss_pred eECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEEC
Confidence 9999 99999887755 379999999 56 5544443 467899999999999888888888 6777777
Q ss_pred CCCeEEE
Q 009614 500 KDNQLYQ 506 (531)
Q Consensus 500 ~~~~l~~ 506 (531)
.++++..
T Consensus 273 ~~~~~~~ 279 (662)
T 3azo_A 273 ATGAATQ 279 (662)
T ss_dssp TTCCEEE
T ss_pred CCCceee
Confidence 6776543
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.46 E-value=2.2e-12 Score=140.74 Aligned_cols=188 Identities=10% Similarity=0.050 Sum_probs=135.0
Q ss_pred eCCCCe-EEeeec-CCeEEEEeCC--C-CcccccccccceEEcc-----cCCCEEEEEEccCCCEEEEEeCC--------
Q 009614 244 KPGDHE-LTLGQR-MRRVRVHPVK--K-QSRELSSLYTGQEFLA-----HEGSILTMKFSLDGQYLASGGED-------- 305 (531)
Q Consensus 244 spdg~~-lasgs~-dg~I~vwd~~--~-~~~~~~~~~~~~~l~~-----H~~~I~~l~fspdg~~Lasgs~D-------- 305 (531)
+|||+. |+.+.. +..|.+++.. . ... +.+.. |...+..++|+|||+.|++++.|
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~--------~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP--------RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCC--------EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCC--------EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 399998 766543 5667777765 1 211 12333 66788999999999999998876
Q ss_pred --CcEEEEEccc------CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccccc
Q 009614 306 --GTVRVWKVIE------HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL 377 (531)
Q Consensus 306 --g~I~iWd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (531)
..|.+|++.+ +..
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~----------------------------------------------------------- 179 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAV----------------------------------------------------------- 179 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGS-----------------------------------------------------------
T ss_pred ceeEEEEEECCCCccccCCce-----------------------------------------------------------
Confidence 5788888765 221
Q ss_pred CcceeEee-cCCCCeeEEEEcCCC-eEEEEeCC--------CcEEEEECC-CC---eEEEEee-cCCceEEEEEeeCCCC
Q 009614 378 EKPLHEFQ-GHSSEVLDLSWSKNG-FLLSSSAD--------KTVRLWQVG-ID---RCLRVFS-HNNYVTSVAFNPVDDN 442 (531)
Q Consensus 378 ~~~~~~~~-~h~~~I~~l~~sp~~-~l~s~s~D--------g~V~lwdl~-~~---~~l~~~~-h~~~V~sv~fsp~d~~ 442 (531)
..+. .+...+..++|+|+| +|+.++.+ ..|++||+. ++ +...... +...+..+.|+| |++
T Consensus 180 ----~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~ 254 (662)
T 3azo_A 180 ----RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGS 254 (662)
T ss_dssp ----EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSC
T ss_pred ----eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCe
Confidence 1122 334567788999999 78777654 379999998 56 4444444 578899999999 888
Q ss_pred EEEEEeCCC--eEEEEeCCCCeEEEecCCCCc---------eEEEEEccCCCEEEEEeCCCcEEEE--eCCCCeE
Q 009614 443 YFISGSIDG--KVRIWEVRRCQVVDYTDIREI---------VSAVCYCPDGKGGIVGTMTGNCRFY--DIKDNQL 504 (531)
Q Consensus 443 ~l~sgs~Dg--~I~Iwd~~~~~~~~~~~~~~~---------v~~v~~spdg~~l~sgs~dg~I~iw--d~~~~~l 504 (531)
+++++..++ .|.+||+.+++...+..+... +..++|+|++++++++.. +.++|| |+.++++
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGEL 328 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEE
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcE
Confidence 888888888 777778777777655443322 467899999999999998 999999 6666653
No 172
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.46 E-value=9.5e-12 Score=125.67 Aligned_cols=190 Identities=12% Similarity=0.074 Sum_probs=126.2
Q ss_pred EEeeecC--CeEEEEeCCCCcccccccccceEE-cccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc-cCccccceecC
Q 009614 250 LTLGQRM--RRVRVHPVKKQSRELSSLYTGQEF-LAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI-EHERLDGFDVQ 325 (531)
Q Consensus 250 lasgs~d--g~I~vwd~~~~~~~~~~~~~~~~l-~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~-~~~~~~~~~~~ 325 (531)
+++|+.. +.|.+|++......+.. .... .++...+..++|+|+|++|++++.+ .|.+|++. +++.....
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~---~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~--- 77 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKL---IKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA--- 77 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEE---EEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE---
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEE---eeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee---
Confidence 4455442 56888776432211111 1111 1234468899999999999999888 99999986 54321100
Q ss_pred CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-e-E-
Q 009614 326 DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-F-L- 402 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~-l- 402 (531)
....+ +.+..++|+|+| + +
T Consensus 78 ---------------------------------------------------------~~~~~-g~~~~~~~spdg~~l~~ 99 (365)
T 1jof_A 78 ---------------------------------------------------------SHPIG-GHPRANDADTNTRAIFL 99 (365)
T ss_dssp ---------------------------------------------------------EEECC-SSGGGGCTTSCCEEEEE
T ss_pred ---------------------------------------------------------EeecC-CCCccEEECCCCCEEEE
Confidence 00001 124457888988 3 3
Q ss_pred EEEe-------------CCCcEEEEECC-CCeEEEEee-----cCCceEEEEEeeCCCCEEEEEeC-CCeEEEEeCC-CC
Q 009614 403 LSSS-------------ADKTVRLWQVG-IDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGSI-DGKVRIWEVR-RC 461 (531)
Q Consensus 403 ~s~s-------------~Dg~V~lwdl~-~~~~l~~~~-----h~~~V~sv~fsp~d~~~l~sgs~-Dg~I~Iwd~~-~~ 461 (531)
+++. .++++.+|++. .++....+. +...+.+++|+| ++++++++.. ++.|++|++. ++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 100 LAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp EECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTS
T ss_pred EEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCC
Confidence 3442 68999999997 465544332 456899999999 8998877654 6899999998 67
Q ss_pred eEEE---ec--CCCCceEEEEEccCCCEEEEEeC-CCcEEEEeCC--CCeEE
Q 009614 462 QVVD---YT--DIREIVSAVCYCPDGKGGIVGTM-TGNCRFYDIK--DNQLY 505 (531)
Q Consensus 462 ~~~~---~~--~~~~~v~~v~~spdg~~l~sgs~-dg~I~iwd~~--~~~l~ 505 (531)
+... .. .+...+..++|+|||++|++++. ++.|.+|++. ++++.
T Consensus 179 ~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 179 EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence 6532 22 23567899999999999988775 6889999765 56654
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=4.7e-11 Score=115.81 Aligned_cols=232 Identities=11% Similarity=0.048 Sum_probs=156.9
Q ss_pred CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccC-CCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceec
Q 009614 246 GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHE-GSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDV 324 (531)
Q Consensus 246 dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~-~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~ 324 (531)
.+++|++++.++.|++||..+++... .+..|. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w-------~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVW-------EYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEE-------EEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEE-------EeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC
Confidence 46789999999999999987665432 244444 4688999999999888 35778999998 8888777765
Q ss_pred CCC-CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee------cCCCCeeEEEEc
Q 009614 325 QDT-DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ------GHSSEVLDLSWS 397 (531)
Q Consensus 325 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~I~~l~~s 397 (531)
... .+...... ....++..... ....++.++.. ++.+..+. .+......+++.
T Consensus 74 ~~~~~~~~~~~~--~dG~~lv~~~~-------------~~~~v~~vd~~-----Gk~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 74 PAGCEMQTARIL--PDGNALVAWCG-------------HPSTILEVNMK-----GEVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp CTTCEEEEEEEC--TTSCEEEEEES-------------TTEEEEEECTT-----SCEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred CCCccccccEEC--CCCCEEEEecC-------------CCCEEEEEeCC-----CCEEEEEeccCCCCcccccccCceEC
Confidence 321 12222222 22222221111 02233333321 11122111 222345566788
Q ss_pred CCC-eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-ecCC------
Q 009614 398 KNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDI------ 469 (531)
Q Consensus 398 p~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~~~------ 469 (531)
++| ++++...++.|.+||.. ++.+..+.....+.++.+.+ +++++++++.++.|..+|..+++++- +...
T Consensus 134 ~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 134 KKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred CCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 888 88899999999999998 99999998666677888888 89999999888899999999888873 3221
Q ss_pred CCceEEEEEccCCCEEEEEeCC--------CcEEEEeC-CCCeEEEEee
Q 009614 470 REIVSAVCYCPDGKGGIVGTMT--------GNCRFYDI-KDNQLYQQNQ 509 (531)
Q Consensus 470 ~~~v~~v~~spdg~~l~sgs~d--------g~I~iwd~-~~~~l~~~~~ 509 (531)
-..+..++..++|.++++.... +..+++.+ .+++++.++.
T Consensus 212 l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp CSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred ccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 1237889999999988887421 24467777 5788877654
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.41 E-value=3.3e-10 Score=112.29 Aligned_cols=233 Identities=11% Similarity=0.061 Sum_probs=145.5
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC----CcEEEEE
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED----GTVRVWK 312 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D----g~I~iWd 312 (531)
...+++|+|+|.+++++..++.|.+|+....... .....+...+.+++|+++|+++++...+ +.|.+||
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-------~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-------RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-------EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE-------EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 3456899999998888888999999998754321 1122456789999999999988877766 6899999
Q ss_pred cccCccccceec--CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 313 VIEHERLDGFDV--QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 313 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
..++.....+.. ....+..+.+.+ ...++....... .......++.++..... +..+..+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~--~g~l~v~~~~~~--------~~~~~~~l~~~~~~~~~-----~~~~~~~~~~ 183 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDS--KGGFYFTDFRGY--------STNPLGGVYYVSPDFRT-----VTPIIQNISV 183 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECT--TSCEEEEECCCB--------TTBCCEEEEEECTTSCC-----EEEEEEEESS
T ss_pred CCCCEEEEEEccCccCCcccceEECC--CCCEEEEecccc--------ccCCCceEEEEeCCCCE-----EEEeecCCCc
Confidence 877654322211 111222233322 222222211100 01123445555543211 2222223345
Q ss_pred eeEEEEcCCC-eEE-EEeCCCcEEEEECCC-CeEEEEe------ec--CCceEEEEEeeCCCCEEEEEeCCCeEEEEeCC
Q 009614 391 VLDLSWSKNG-FLL-SSSADKTVRLWQVGI-DRCLRVF------SH--NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (531)
Q Consensus 391 I~~l~~sp~~-~l~-s~s~Dg~V~lwdl~~-~~~l~~~------~h--~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~ 459 (531)
+..++|+|++ .|+ +.+.++.|.+||+.+ +..+..+ .. ...+..+++++ +++++++...++.|.+||..
T Consensus 184 ~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEETTTEEEEECTT
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECC-CCCEEEEEcCCCEEEEECCC
Confidence 7899999998 454 455678999999964 3322211 11 24678899999 89988888888999999995
Q ss_pred CCeEEEecCCCC------ceEEEEEccCCCEEEEEeCCC
Q 009614 460 RCQVVDYTDIRE------IVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 460 ~~~~~~~~~~~~------~v~~v~~spdg~~l~sgs~dg 492 (531)
......+..... .+.+++|+||++.|++++.++
T Consensus 263 g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 263 GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 433333333222 688999999988887776664
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.41 E-value=2.7e-11 Score=133.56 Aligned_cols=204 Identities=8% Similarity=0.008 Sum_probs=136.1
Q ss_pred ccceeeeCCCCeEEeeecCC-----eEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCc-----
Q 009614 238 HGSATLKPGDHELTLGQRMR-----RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT----- 307 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg-----~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~----- 307 (531)
+..++|+|||++||.+..++ .|++||+.++..... .+. + ..+..++|+|||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~------~~~-~-~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD------VLE-R-VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE------EEE-E-ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc------ccc-C-cccceEEEEeCCCEEEEEEECCcccccc
Confidence 44679999999998765543 899999986553211 121 1 23678999999999999988765
Q ss_pred -----------EEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccc
Q 009614 308 -----------VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL 376 (531)
Q Consensus 308 -----------I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (531)
|++|++.++....
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~-------------------------------------------------------- 222 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSED-------------------------------------------------------- 222 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGC--------------------------------------------------------
T ss_pred ccccccCCCCEEEEEECCCCcccc--------------------------------------------------------
Confidence 6666665443110
Q ss_pred cCcceeEeecCCCCeeEEEEcCCC-eEEEEeC-----CCcEEEEECCC------C--eEEEEeecCCceEEEEEeeCCCC
Q 009614 377 LEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSA-----DKTVRLWQVGI------D--RCLRVFSHNNYVTSVAFNPVDDN 442 (531)
Q Consensus 377 ~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~-----Dg~V~lwdl~~------~--~~l~~~~h~~~V~sv~fsp~d~~ 442 (531)
..+.....|...+..+.|+|+| +|+.++. +..|.+||+.+ + .......+...+.. .|+| ++.
T Consensus 223 --~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~-dg~ 298 (710)
T 2xdw_A 223 --ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTN-EGT 298 (710)
T ss_dssp --EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEE-ETT
T ss_pred --eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEec-cCC
Confidence 0011122345567889999999 6666553 56899999976 4 23333345555554 4888 777
Q ss_pred EEEEEeCC----CeEEEEeCCCCe---EEEecCCCC--ceEEEEEccCCCEEEEEeCCCc--EEEEeCCCCeEEEEee
Q 009614 443 YFISGSID----GKVRIWEVRRCQ---VVDYTDIRE--IVSAVCYCPDGKGGIVGTMTGN--CRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 443 ~l~sgs~D----g~I~Iwd~~~~~---~~~~~~~~~--~v~~v~~spdg~~l~sgs~dg~--I~iwd~~~~~l~~~~~ 509 (531)
.|+..+.. +.|.+||+.++. ...+..+.. .+..++|++++.++++...++. |++|++.+++.+..+.
T Consensus 299 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 299 VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence 76665543 369999998764 233444443 6888999988888888888885 6667876777655543
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=3.1e-11 Score=115.78 Aligned_cols=238 Identities=6% Similarity=-0.064 Sum_probs=153.0
Q ss_pred cccceeeeCCCCeEE-eeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEccc
Q 009614 237 RHGSATLKPGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (531)
Q Consensus 237 ~~~s~~fspdg~~la-sgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~ 315 (531)
...+++++++|.+++ +...++.|.+|+......... ...+...+.+|+++++|+++++.. ++.|.+|+...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-------~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-------PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-------CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-------eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCC
Confidence 444689999999777 557789999998764332111 112335678999999999666655 88999999865
Q ss_pred CccccceecCC-CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEE
Q 009614 316 HERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (531)
Q Consensus 316 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l 394 (531)
.... .+.... ..+..+.+.+ .+.++.. ...++.+.+++...... ......+...+.+|
T Consensus 97 ~~~~-~~~~~~~~~p~~i~~~~--~g~l~v~--------------~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i 155 (270)
T 1rwi_B 97 NNQT-VLPFDGLNYPEGLAVDT--QGAVYVA--------------DRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGV 155 (270)
T ss_dssp SCCE-ECCCCSCSSEEEEEECT--TCCEEEE--------------EGGGTEEEEECTTCCSC----EECCCCSCCSCCCE
T ss_pred ceEe-eeecCCcCCCcceEECC--CCCEEEE--------------ECCCCEEEEEECCCcee----EeeccccCCCceeE
Confidence 5422 121111 1222333322 1222222 12234455554332111 11112233467889
Q ss_pred EEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec-CCCC
Q 009614 395 SWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT-DIRE 471 (531)
Q Consensus 395 ~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~-~~~~ 471 (531)
++++++ ++++...++.|.+||........... +...+.+|+++| ++.++++...++.|.+|+.......... .+..
T Consensus 156 ~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~ 234 (270)
T 1rwi_B 156 AVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN 234 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCS
T ss_pred EEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCC
Confidence 999988 66666667899999998776544322 336789999999 8888888778899999999876544332 2335
Q ss_pred ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q 009614 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l 504 (531)
.+.+++++|+|+++++...++.|++|++...+.
T Consensus 235 ~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 235 TPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 789999999999888888899999999876543
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.40 E-value=6.3e-11 Score=118.05 Aligned_cols=228 Identities=8% Similarity=0.098 Sum_probs=144.8
Q ss_pred cccceeeeCCCCeEEeeecC---C--eEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC------
Q 009614 237 RHGSATLKPGDHELTLGQRM---R--RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED------ 305 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~d---g--~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D------ 305 (531)
.+...+|+|||++||..+.+ + .|.+|++..+... .+..+.. +..++|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~--------~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~ 130 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK--------KILEAKN-IRSLEWNEDSRKLLIVGFKRREDED 130 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE--------EEEEESE-EEEEEECTTSSEEEEEEECCCC---
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE--------EEEcCCC-ccceeECCCCCEEEEEEccCCCcCC
Confidence 44568999999999887654 3 4777777643321 1222334 9999999999999888642
Q ss_pred ---------------------CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCC-C
Q 009614 306 ---------------------GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSS-D 363 (531)
Q Consensus 306 ---------------------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 363 (531)
..|.+|++.+++....+.. . .+..+.+.++. .++......... ... .
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~-------~~~~~ 199 (347)
T 2gop_A 131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIP-------QYFKF 199 (347)
T ss_dssp ------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSC-------CSSCC
T ss_pred cEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccc-------ccccc
Confidence 5789999988775344433 2 45555666544 222221111000 000 2
Q ss_pred ceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCC--------CcEEEEECCCCeEEEEee-cCCceEE
Q 009614 364 LTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD--------KTVRLWQVGIDRCLRVFS-HNNYVTS 433 (531)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~D--------g~V~lwdl~~~~~l~~~~-h~~~V~s 433 (531)
..++.++ . . ....+..+ ..+..+ +|+| .|+.++.+ ..|.+|| +++...... +...+..
T Consensus 200 ~~l~~~d--~----~-~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~ 267 (347)
T 2gop_A 200 WDIYIWE--D----G-KEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQ 267 (347)
T ss_dssp EEEEEEE--T----T-EEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEE
T ss_pred ccEEEeC--C----C-ceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCC
Confidence 2344443 1 1 12223333 445444 8999 77766644 3688888 555544443 5677886
Q ss_pred -EEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcE-EEEeCCCCe
Q 009614 434 -VAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNC-RFYDIKDNQ 503 (531)
Q Consensus 434 -v~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I-~iwd~~~~~ 503 (531)
+.|+ ++ ++++++.++.++|| +.+++...+..+...|.+++|+| .++++++.++.. .||.+. ++
T Consensus 268 ~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 268 AKIKD--GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp EEEET--TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS
T ss_pred ccEEc--Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc
Confidence 8897 56 88899999999999 87777666666677899999999 677777777765 777776 54
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=4.4e-11 Score=118.68 Aligned_cols=193 Identities=11% Similarity=0.068 Sum_probs=140.5
Q ss_pred ccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEccc
Q 009614 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~ 315 (531)
..+.+++|++++..++....++.++.|.-. ....+..+...+.+++|+++|++++++..++.|.+||..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE----------PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE----------EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred cccceeeecCCccceeEEeecccCcccccc----------eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 446678899998888877788888888321 1123556777789999999999888888899999999866
Q ss_pred CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEE
Q 009614 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (531)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~ 395 (531)
++... ....+...+.+++
T Consensus 76 ~~~~~--------------------------------------------------------------~~~~~~~~~~~i~ 93 (333)
T 2dg1_A 76 KEIKR--------------------------------------------------------------PFVSHKANPAAIK 93 (333)
T ss_dssp CCEEE--------------------------------------------------------------EEECSSSSEEEEE
T ss_pred CcEEE--------------------------------------------------------------EeeCCCCCcceEE
Confidence 54210 0112345789999
Q ss_pred EcCCC-eEEEEeCC----CcEEEEECCCCeEEEEee---cCCceEEEEEeeCCCCEEEEEeC------CCeEEEEeCCCC
Q 009614 396 WSKNG-FLLSSSAD----KTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSI------DGKVRIWEVRRC 461 (531)
Q Consensus 396 ~sp~~-~l~s~s~D----g~V~lwdl~~~~~l~~~~---h~~~V~sv~fsp~d~~~l~sgs~------Dg~I~Iwd~~~~ 461 (531)
++|++ ++++...+ +.|.+||..++.....+. +...+..++++| +++++++... .+.|..||..++
T Consensus 94 ~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 94 IHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFR 172 (333)
T ss_dssp ECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSC
T ss_pred ECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCC
Confidence 99999 55555555 689999998877654432 446789999999 8888777654 356777777766
Q ss_pred eEEEecCCCCceEEEEEccCCCEEEE-EeCCCcEEEEeCCC
Q 009614 462 QVVDYTDIREIVSAVCYCPDGKGGIV-GTMTGNCRFYDIKD 501 (531)
Q Consensus 462 ~~~~~~~~~~~v~~v~~spdg~~l~s-gs~dg~I~iwd~~~ 501 (531)
+...+......+..++|+|+|+.|++ .+.++.|++|++.+
T Consensus 173 ~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 173 TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 65544444446789999999986654 45678999999964
No 179
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=2.2e-11 Score=123.04 Aligned_cols=178 Identities=9% Similarity=0.017 Sum_probs=131.3
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCccccc----ccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS----SLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~----~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd 312 (531)
.++.+++++...++++|+.++ ++||++........ .... .....+.+ |+.|+| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~-~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTF-KWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCC-SEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccc-eEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 466799999999999998875 66698764431100 0111 12334667 999999 99999999 889999999
Q ss_pred cccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCee
Q 009614 313 VIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (531)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~ 392 (531)
+.+..... ....|...+.
T Consensus 113 v~sl~~~~--------------------------------------------------------------~~~~~~~~v~ 130 (388)
T 1xip_A 113 LEELSEFR--------------------------------------------------------------TVTSFEKPVF 130 (388)
T ss_dssp SSSTTCEE--------------------------------------------------------------EEEECSSCEE
T ss_pred chhhhccC--------------------------------------------------------------ccceeeccee
Confidence 87654211 1122334456
Q ss_pred EEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeE--E-Ee---
Q 009614 393 DLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV--V-DY--- 466 (531)
Q Consensus 393 ~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~--~-~~--- 466 (531)
++.+.+. .+++++.||.|.+||+..+.... +...|+|++|+| ++ ++.|..||++++|+...+++ . .+
T Consensus 131 ~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~P 203 (388)
T 1xip_A 131 QLKNVNN-TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLP 203 (388)
T ss_dssp EEEECSS-EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred eEEecCC-CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCC
Confidence 6666554 48888999999999999887654 456899999999 77 78899999999999988774 2 23
Q ss_pred ---c---CCCCceEEEEEccCCCEEEEEe
Q 009614 467 ---T---DIREIVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 467 ---~---~~~~~v~~v~~spdg~~l~sgs 489 (531)
. +|...|.+|+|.+++.++++-.
T Consensus 204 p~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 204 SELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp HHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 2 3678899999999999988743
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.37 E-value=5.8e-11 Score=120.21 Aligned_cols=237 Identities=9% Similarity=-0.000 Sum_probs=145.1
Q ss_pred ceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEE--EccCCCEEEEE---------------
Q 009614 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMK--FSLDGQYLASG--------------- 302 (531)
Q Consensus 240 s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~--fspdg~~Lasg--------------- 302 (531)
...|+|||+.|+.+..++.|++|++...... ..+..+...+.... ++|++++|+..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~-------~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEEN-------VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEE-------EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcce-------eeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 4689999999999999999999999865432 12334555454444 48999988743
Q ss_pred -------eCCCcEEEEEcccCccccceecCCCCCeeEEEee-cCCcceeeeeccccccccccccccCCCceEEEeCCccc
Q 009614 303 -------GEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTI-NHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (531)
Q Consensus 303 -------s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (531)
..+..|.+||+.+++... +...........+++ +....++... ... ......+++++...
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~-~~~---------~~~~~~l~~~d~~~- 225 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHE-GPH---------DLVDARMWLINEDG- 225 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEEC-SCT---------TTSSCSEEEEETTS-
T ss_pred hhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEe-cCC---------CCCcceEEEEeCCC-
Confidence 244679999998876432 322233344445555 3322211111 100 01122444444322
Q ss_pred cccCcceeEeecCC--CCeeEEEEcCCC-eEEEEeC--CC---cEEEEECCCCeEEEEeecCCc------eEEEEEeeCC
Q 009614 375 RLLEKPLHEFQGHS--SEVLDLSWSKNG-FLLSSSA--DK---TVRLWQVGIDRCLRVFSHNNY------VTSVAFNPVD 440 (531)
Q Consensus 375 ~~~~~~~~~~~~h~--~~I~~l~~sp~~-~l~s~s~--Dg---~V~lwdl~~~~~l~~~~h~~~------V~sv~fsp~d 440 (531)
.....+..+. ..+..+.|+|+| .|+..+. .+ .|.+||+.+++.......... ...++|+| +
T Consensus 226 ----~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-d 300 (388)
T 3pe7_A 226 ----TNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVG-D 300 (388)
T ss_dssp ----CCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEE-E
T ss_pred ----CceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEcc-C
Confidence 1223333343 257788999999 5654332 22 399999999875443332220 11237999 8
Q ss_pred CCEEEEE---------eCCCeEEEEeCCCCeEEEecCCCC-----------ceEEEEEccCCCEEEEEe-CCCcEEEEeC
Q 009614 441 DNYFISG---------SIDGKVRIWEVRRCQVVDYTDIRE-----------IVSAVCYCPDGKGGIVGT-MTGNCRFYDI 499 (531)
Q Consensus 441 ~~~l~sg---------s~Dg~I~Iwd~~~~~~~~~~~~~~-----------~v~~v~~spdg~~l~sgs-~dg~I~iwd~ 499 (531)
++.|+.. ..+..|++||+.+++...+..+.. .+..++|+|||+.|+.++ .+|...||.+
T Consensus 301 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 301 GSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp ECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 8877753 456789999999998876666655 578899999999888766 4676666654
Q ss_pred C
Q 009614 500 K 500 (531)
Q Consensus 500 ~ 500 (531)
.
T Consensus 381 ~ 381 (388)
T 3pe7_A 381 T 381 (388)
T ss_dssp E
T ss_pred E
Confidence 3
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.37 E-value=3.2e-11 Score=132.59 Aligned_cols=204 Identities=11% Similarity=0.024 Sum_probs=136.9
Q ss_pred cccceeeeCCCCeEE-----eeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCc----
Q 009614 237 RHGSATLKPGDHELT-----LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT---- 307 (531)
Q Consensus 237 ~~~s~~fspdg~~la-----sgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~---- 307 (531)
.+.+++|+|||++|| .|+.+..|++||+.++...... .+... ....++|+|||+.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-----~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-----VIEGG--KYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-----CBSCC--TTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-----ccCcc--cccceEEecCCCEEEEEEecCCCCCc
Confidence 355689999999998 5556679999999876532010 11111 1267899999999999988776
Q ss_pred ---------EEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 308 ---------VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 308 ---------I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
|++|++.++....
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~---------------------------------------------------------- 216 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKD---------------------------------------------------------- 216 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGC----------------------------------------------------------
T ss_pred cccCCCCCEEEEEECCCCchhc----------------------------------------------------------
Confidence 8888876654210
Q ss_pred cceeEeecCCCCeeEEEEcCCC-eEEEEeCCC----cEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEe---CC
Q 009614 379 KPLHEFQGHSSEVLDLSWSKNG-FLLSSSADK----TVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS---ID 450 (531)
Q Consensus 379 ~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg----~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs---~D 450 (531)
..+.....|...+..+.|+|+| +|+.++.++ .|.+|+..++.......+...+....+ | ++.+++... .+
T Consensus 217 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~-~g~l~~~s~~~~~~ 294 (695)
T 2bkl_A 217 TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-W-KDRFYVLTDEGAPR 294 (695)
T ss_dssp EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-E-TTEEEEEECTTCTT
T ss_pred eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-c-CCcEEEEECCCCCC
Confidence 0112223455678899999999 777666555 677777766665555556666677767 5 555544444 25
Q ss_pred CeEEEEeCCCCeE---EEecCC--CCceEEEEEccCCCEEEEEeCCCcEEEEeCC-CCeEEEEe
Q 009614 451 GKVRIWEVRRCQV---VDYTDI--REIVSAVCYCPDGKGGIVGTMTGNCRFYDIK-DNQLYQQN 508 (531)
Q Consensus 451 g~I~Iwd~~~~~~---~~~~~~--~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~-~~~l~~~~ 508 (531)
+.|.+||+.++.. ..+..+ ...+..++|+ ++.++++...|+..+||.+. +++....+
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 8999999987652 333333 4567888888 77788888999988887654 35444433
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.36 E-value=1.6e-10 Score=114.94 Aligned_cols=221 Identities=13% Similarity=0.129 Sum_probs=146.3
Q ss_pred CCCEEEEEEccCCCEEEEEeCC------------------------CcEEEEEcccCccccceecC-CCCCeeEEEeecC
Q 009614 284 EGSILTMKFSLDGQYLASGGED------------------------GTVRVWKVIEHERLDGFDVQ-DTDPSCLYFTINH 338 (531)
Q Consensus 284 ~~~I~~l~fspdg~~Lasgs~D------------------------g~I~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~ 338 (531)
-+.+.+|+++|+|+++++...+ +.|.+||..+++....+... ...+..+.+.+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-- 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-- 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT--
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC--
Confidence 4679999999999999888877 47999998887765443211 11233333332
Q ss_pred CcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe---------ecCCCCeeEEEEcC-CC-eEEEEe-
Q 009614 339 LSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF---------QGHSSEVLDLSWSK-NG-FLLSSS- 406 (531)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~I~~l~~sp-~~-~l~s~s- 406 (531)
...++. ....+..+..|+..... ..+..+ .++......|+++| ++ ++++.+
T Consensus 101 ~g~l~v--------------~d~~~~~v~~~~~~g~~---~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 101 DGNYWV--------------TDVALHQVFKLDPHSKE---GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp TSCEEE--------------EETTTTEEEEECTTCSS---CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred CCCEEE--------------EECCCCEEEEEeCCCCe---EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 222222 22334456666553210 022222 24555789999999 67 666665
Q ss_pred CCCcEEEEECCCCeEEEEeec-----------CCceEEEEEeeCC-CCEEEEEeCCCeEEEEeCCCCeEEEe---cCCCC
Q 009614 407 ADKTVRLWQVGIDRCLRVFSH-----------NNYVTSVAFNPVD-DNYFISGSIDGKVRIWEVRRCQVVDY---TDIRE 471 (531)
Q Consensus 407 ~Dg~V~lwdl~~~~~l~~~~h-----------~~~V~sv~fsp~d-~~~l~sgs~Dg~I~Iwd~~~~~~~~~---~~~~~ 471 (531)
.++.|++|+ ..+..+..+.. -.....|+++| + +.++++...++.|++|+..+++.+.. ..+..
T Consensus 164 ~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 164 CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR 241 (329)
T ss_dssp SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT
T ss_pred CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC
Confidence 689999999 56777777742 13489999999 6 78888888899999999998877753 34556
Q ss_pred ceEEEEEcc------CCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 472 IVSAVCYCP------DGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 472 ~v~~v~~sp------dg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
.+.+++|+| +|+.+++...+..|++|++.+++++..+.. ...+.....+|+|.|
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~-----~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP-----VRKHFDMPHDIVASE 301 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC-----SSSCCSSEEEEEECT
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC-----CCCccCCeeEEEECC
Confidence 789999999 333333334456899999999998876531 122335567777765
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.36 E-value=4.6e-10 Score=108.71 Aligned_cols=220 Identities=10% Similarity=0.098 Sum_probs=143.8
Q ss_pred ccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCC------CCCeeEEEeecCCcceeeeeccccccccc
Q 009614 282 AHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQD------TDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (531)
Q Consensus 282 ~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (531)
+|-..+.+|+++++|+++++...++.|.+||.. ++....+.... ..+..+.+. .....++....
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~-~~~g~l~v~~~-------- 96 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVV-RNSGDIIVTER-------- 96 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEE-TTTTEEEEEEC--------
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEE-cCCCeEEEEcC--------
Confidence 455679999999999988888889999999976 44444332211 112222221 11112221111
Q ss_pred cccccCCCceEEEeCCccccccCcceeEee-cCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee---cCCc
Q 009614 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ-GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS---HNNY 430 (531)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~---h~~~ 430 (531)
..+..+.+|+... +.+..+. .+...+..+++.|++ ++++...++.|.+||.. ++.+..+. +...
T Consensus 97 -----~~~~~i~~~d~~g-----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 97 -----SPTHQIQIYNQYG-----QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEF 165 (286)
T ss_dssp -----GGGCEEEEECTTS-----CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSS
T ss_pred -----CCCCEEEEECCCC-----cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCC
Confidence 1134566665321 2233332 244578999999999 66666778999999964 55666664 4456
Q ss_pred eEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCC--CCceEEEEEccCCCEEEEEeCCC-cEEEEeCCCCeEEEE
Q 009614 431 VTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI--REIVSAVCYCPDGKGGIVGTMTG-NCRFYDIKDNQLYQQ 507 (531)
Q Consensus 431 V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~--~~~v~~v~~spdg~~l~sgs~dg-~I~iwd~~~~~l~~~ 507 (531)
+..|+++| +++++++...++.|++||.....+..+... ...+..++++|+|+++++...++ .|++||.. ++.+..
T Consensus 166 p~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~ 243 (286)
T 1q7f_A 166 PNGVVVND-KQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISA 243 (286)
T ss_dssp EEEEEECS-SSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEE
T ss_pred cEEEEECC-CCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEE
Confidence 89999999 888888888899999999865544444332 35789999999999888888776 99999964 555555
Q ss_pred eeeeecccccCCCceeeeEEEee
Q 009614 508 NQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 508 ~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+.... ....+.+++|.|
T Consensus 244 ~~~~~------~~~~~~~i~~~~ 260 (286)
T 1q7f_A 244 LESKV------KHAQCFDVALMD 260 (286)
T ss_dssp EEESS------CCSCEEEEEEET
T ss_pred EcccC------CCCcceeEEECC
Confidence 44321 123456666654
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.35 E-value=4.1e-10 Score=112.00 Aligned_cols=236 Identities=8% Similarity=-0.002 Sum_probs=157.7
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcccc
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLD 320 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~ 320 (531)
+++. ++.+.++...++.|.+||..+.+.. ..+. .......|+++++++.+++...++.|.+||..+++...
T Consensus 49 i~~~-~~~lyv~~~~~~~v~viD~~t~~~~-------~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 49 MVIR-DGIGWIVVNNSHVIFAIDINTFKEV-------GRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp EEEE-TTEEEEEEGGGTEEEEEETTTCCEE-------EEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred EEEE-CCEEEEEEcCCCEEEEEECcccEEE-------EEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 4553 4555566667899999999854432 2232 34678899999998544544489999999999988766
Q ss_pred ceecCCC-----CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEE
Q 009614 321 GFDVQDT-----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (531)
Q Consensus 321 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~ 395 (531)
.+..... .+..+.+ . ...++... .+.+..+.+++...... +..+.. ......+.
T Consensus 120 ~i~~g~~~~~~~~p~~i~~--~-~~~lyv~~-------------~~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~ 178 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ--Y-GKYVYVNC-------------WSYQNRILKIDTETDKV----VDELTI-GIQPTSLV 178 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE--E-TTEEEEEE-------------CTTCCEEEEEETTTTEE----EEEEEC-SSCBCCCE
T ss_pred EEEcCCccccCCCcceEEE--E-CCEEEEEc-------------CCCCCEEEEEECCCCeE----EEEEEc-CCCccceE
Confidence 6654331 2223333 1 11222111 11245677776655332 223332 23457889
Q ss_pred EcCCC-eEEEEeCC----------CcEEEEECCCCeEEEEeec--CCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 396 WSKNG-FLLSSSAD----------KTVRLWQVGIDRCLRVFSH--NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 396 ~sp~~-~l~s~s~D----------g~V~lwdl~~~~~l~~~~h--~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
++|+| +++++..+ +.|.+||..+++....+.. ......++|+| ++++|+++.. .|.+||+.+++
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSS
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCc
Confidence 99999 44444443 7899999999998877763 34789999999 8888887654 89999999887
Q ss_pred EEE--ecCC-CCceEEEEEcc-CCCEEEEE----eCCCcEEEEeCCCCeEEEEeee
Q 009614 463 VVD--YTDI-REIVSAVCYCP-DGKGGIVG----TMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 463 ~~~--~~~~-~~~v~~v~~sp-dg~~l~sg----s~dg~I~iwd~~~~~l~~~~~~ 510 (531)
+.. +... ......++++| ++.++++. ..++.|.+||.. ++++.++.+
T Consensus 256 ~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 256 VPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp CCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred eeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe
Confidence 642 1221 45789999999 55555555 568899999998 998888765
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.33 E-value=2.4e-10 Score=113.86 Aligned_cols=234 Identities=11% Similarity=0.094 Sum_probs=139.0
Q ss_pred ceeeeCCCCeEEee---------ecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC---C-
Q 009614 240 SATLKPGDHELTLG---------QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED---G- 306 (531)
Q Consensus 240 s~~fspdg~~lasg---------s~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D---g- 306 (531)
...+ ||++++.. ..++.|.+|+...+... .+ ..+..++|+|||++||.++.+ +
T Consensus 19 ~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--------~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 19 DPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR--------FI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp EEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE--------EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred cceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE--------Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 3455 77777653 23678999998754321 22 468889999999999988754 3
Q ss_pred -cEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccc--cc--ccccc-------ccCCCceEEEeCCccc
Q 009614 307 -TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEK--ID--KTKSL-------RKSSDLTCVVLPPKVF 374 (531)
Q Consensus 307 -~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~-------~~~~~~~~~~~~~~~~ 374 (531)
.|.+|++.+++......... +..+.|.++....++........ .. ..... .......+++|+....
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred ceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 37778887776543333222 45555655543333322110000 00 00000 0011345666665432
Q ss_pred cccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCC-------cEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEE
Q 009614 375 RLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADK-------TVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISG 447 (531)
Q Consensus 375 ~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg-------~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sg 447 (531)
. .+..+.. . .+..+.|+|+|+++++..+. ...||.+.+++......+ ..+..+ +| ++++|+.+
T Consensus 163 ~----~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--sp-dg~~l~~~ 232 (347)
T 2gop_A 163 E----VIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DS-DGERILLY 232 (347)
T ss_dssp E----EEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EE-CSSCEEEE
T ss_pred e----EEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CC-CCCEEEEE
Confidence 2 1133333 3 78899999999444554432 344554446655444445 555554 99 89888877
Q ss_pred eCC--------CeEEEEeCCCCeEEEe-cCCCCceEE-EEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q 009614 448 SID--------GKVRIWEVRRCQVVDY-TDIREIVSA-VCYCPDGKGGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 448 s~D--------g~I~Iwd~~~~~~~~~-~~~~~~v~~-v~~spdg~~l~sgs~dg~I~iwd~~~~~l 504 (531)
+.+ ..|.+|| +++...+ ..+...+.. +.|+ || ++++++.++.++|| +.++++
T Consensus 233 ~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred EccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 654 4788888 6665554 344667876 9999 98 88999999999999 876654
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.31 E-value=3e-11 Score=122.37 Aligned_cols=240 Identities=7% Similarity=-0.018 Sum_probs=141.6
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEE-------------------EEEccCCCEEEE
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILT-------------------MKFSLDGQYLAS 301 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~-------------------l~fspdg~~Las 301 (531)
..|+|||++|+.++.++.|++|+....... .....+...... +.|+|+++.++.
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~-------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQ-------VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEE-------EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcE-------EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceee
Confidence 689999999999999999999998765422 112222222222 356777777665
Q ss_pred E-----eCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccc
Q 009614 302 G-----GEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL 376 (531)
Q Consensus 302 g-----s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (531)
+ ..+..|.+||+.+++..... ........+.+.+.....++....... ......+++++...
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~---------~~~~~~l~~~d~~~--- 225 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPH---------DLVDARMWLVNEDG--- 225 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCS---------SSCSCCCEEEETTS---
T ss_pred eeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCC---------CCCCceEEEEECCC---
Confidence 4 35678999999877643332 222233344444411111221111000 00012344444322
Q ss_pred cCcceeEeecC--CCCeeEEEEcCCC-eEEEEeCC-----CcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEe
Q 009614 377 LEKPLHEFQGH--SSEVLDLSWSKNG-FLLSSSAD-----KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS 448 (531)
Q Consensus 377 ~~~~~~~~~~h--~~~I~~l~~sp~~-~l~s~s~D-----g~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs 448 (531)
.....+..+ ...+..++|+|+| .|+.++.+ +.|.+||+.+++......... .. +.|+|.+++++++++
T Consensus 226 --~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 226 --SNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp --CCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEE
T ss_pred --CceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEec
Confidence 112222222 2357889999999 66666543 449999999887655443333 33 889884667777654
Q ss_pred ----------------CCCeEEEEeCCCCeEEEecCCCC-----------ceEEEEEccCCCEEEEEeC-CCcEEEE--e
Q 009614 449 ----------------IDGKVRIWEVRRCQVVDYTDIRE-----------IVSAVCYCPDGKGGIVGTM-TGNCRFY--D 498 (531)
Q Consensus 449 ----------------~Dg~I~Iwd~~~~~~~~~~~~~~-----------~v~~v~~spdg~~l~sgs~-dg~I~iw--d 498 (531)
.+..|++||+.+++...+..+.. .+..++|+|||+.|+.++. ++...|| +
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 302 CDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 34789999999887655554443 2567899999998887765 4554444 5
Q ss_pred CCCCeE
Q 009614 499 IKDNQL 504 (531)
Q Consensus 499 ~~~~~l 504 (531)
+.+++.
T Consensus 382 ~~~~~~ 387 (396)
T 3c5m_A 382 VPESYK 387 (396)
T ss_dssp CCTTCC
T ss_pred Eccccc
Confidence 555443
No 187
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.26 E-value=4.8e-09 Score=106.19 Aligned_cols=243 Identities=10% Similarity=-0.066 Sum_probs=147.7
Q ss_pred ceeeeCCCCeEEeee----------cCCeEEEEeCCCCcccccccccc--eEEcccCCCEEEEEEccCCCEEEEEeC--C
Q 009614 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTG--QEFLAHEGSILTMKFSLDGQYLASGGE--D 305 (531)
Q Consensus 240 s~~fspdg~~lasgs----------~dg~I~vwd~~~~~~~~~~~~~~--~~l~~H~~~I~~l~fspdg~~Lasgs~--D 305 (531)
.++++|||++++++. .++.|.++|..+..... ..... .... +...-..+.|+|||++|+.+.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~-~i~~~~~~~~~-~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA-DIELPDAPRFD-VGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEE-EEECCCccccc-cCCCccceEECCCCCEEEEEecCCC
Confidence 589999999998875 36789999987433211 00000 0000 1123458899999999998874 5
Q ss_pred CcEEEEEcccCccccc-eecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcce--e
Q 009614 306 GTVRVWKVIEHERLDG-FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL--H 382 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 382 (531)
+.|.++| .+++.... +.... +..+.+......+ ....++.+..++. ......... .
T Consensus 148 ~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~---------------~~~~dg~~~~vd~-~g~~~~~~~~~~ 206 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFY---------------LLCAQGGLAKTDH-AGGAAGAGLVGA 206 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEE---------------EEcCCCCEEEEEC-CCcEEEEEeccc
Confidence 7899999 98887666 54321 2222222222111 1122333444433 211110000 0
Q ss_pred EeecCCCC-eeEEEEcCCC-eEEEEeCCCcEEEEECCCCe--EEEEee-----------cCCceEEEEEeeCCCCEEEEE
Q 009614 383 EFQGHSSE-VLDLSWSKNG-FLLSSSADKTVRLWQVGIDR--CLRVFS-----------HNNYVTSVAFNPVDDNYFISG 447 (531)
Q Consensus 383 ~~~~h~~~-I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~--~l~~~~-----------h~~~V~sv~fsp~d~~~l~sg 447 (531)
.+ ....+ .....+.+++ .++..+..+.|.+.|+.+.. .+..+. .......+.++| +++.++++
T Consensus 207 ~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~ 284 (373)
T 2mad_H 207 ML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLL 284 (373)
T ss_pred cc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC-CCCEEEEE
Confidence 00 11111 1223455555 44434467899999987552 233332 123344578999 77776665
Q ss_pred eC----------CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCC-EEEEEe-CCCcEEEEeCCCCeEEEE
Q 009614 448 SI----------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK-GGIVGT-MTGNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 448 s~----------Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~-~l~sgs-~dg~I~iwd~~~~~l~~~ 507 (531)
.. .+.|.++|+.+++++...........++|+|||+ +++++. .++.|.+||+.+++.+..
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 43 3589999999999987556666789999999999 777777 489999999999999876
No 188
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=1.3e-10 Score=117.45 Aligned_cols=180 Identities=8% Similarity=0.004 Sum_probs=127.2
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCce
Q 009614 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLT 365 (531)
Q Consensus 286 ~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (531)
.++.+++++...+|++|+.++ +++|++........- ....
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~--~~~~------------------------------------- 78 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITS--DSTP------------------------------------- 78 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHS--SSCC-------------------------------------
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcc--cccc-------------------------------------
Confidence 689999999999999999985 556998654421110 0000
Q ss_pred EEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCE
Q 009614 366 CVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNY 443 (531)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~ 443 (531)
..+... ..+.+ |+.|+| ++ .|+++ .++.|++||+.+....... .|...+.++.+.+ . .
T Consensus 79 ------------~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~-p--~ 138 (388)
T 1xip_A 79 ------------LTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN-N--T 138 (388)
T ss_dssp ------------CCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS-S--E
T ss_pred ------------ccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecC-C--C
Confidence 001111 12556 999999 66 77777 8899999999876544444 4777888887765 2 3
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE--EEEeeeeecccc-cCCC
Q 009614 444 FISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQL--YQQNQICLQGKK-KLPG 520 (531)
Q Consensus 444 l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l--~~~~~~~~~~~k-k~~~ 520 (531)
++++..||.|.+||+.++.... +...|+++||+|+| ++.|..||++++|+...+++ ...+..+..-.. ..+.
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~ 213 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEE 213 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTT
T ss_pred EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCC
Confidence 8889999999999999887764 34689999999999 78899999999999988776 444322211110 1245
Q ss_pred ceeeeEEEee
Q 009614 521 KRITGFQVVK 530 (531)
Q Consensus 521 ~~It~l~f~p 530 (531)
.+|++|+|.+
T Consensus 214 ~~V~sI~wl~ 223 (388)
T 1xip_A 214 YSPLSVTILS 223 (388)
T ss_dssp SEEEEEEESS
T ss_pred eeEEEEEEec
Confidence 8899998864
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.23 E-value=3.3e-09 Score=103.78 Aligned_cols=221 Identities=7% Similarity=0.055 Sum_probs=142.4
Q ss_pred cccceeeeCCCCeEEe-------eecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC-CCEEEEEeCCCcE
Q 009614 237 RHGSATLKPGDHELTL-------GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTV 308 (531)
Q Consensus 237 ~~~s~~fspdg~~las-------gs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~Lasgs~Dg~I 308 (531)
...+++|+++|.++++ +..++.|.+|+..+..... ... ....++...+.+++++++ |+++++. ..+.|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l 94 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV--ICK-PEVNGYGGIPAGCQCDRDANQLFVAD-MRLGL 94 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE--EEC-CEETTEECCEEEEEECSSSSEEEEEE-TTTEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE--EEe-cccCCCCCCCceEEEecCCCcEEEEE-CCCCE
Confidence 3456889999988888 6788999999976544221 100 011235577999999999 7655544 44468
Q ss_pred EEEEcccCccccc-eecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecC
Q 009614 309 RVWKVIEHERLDG-FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH 387 (531)
Q Consensus 309 ~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 387 (531)
.+||.. ++.... .... ...+
T Consensus 95 ~~~d~~-g~~~~~~~~~~----------------------------------------------------------~~~~ 115 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDS----------------------------------------------------------EGRR 115 (314)
T ss_dssp EEEETT-SCEEECCSBCT----------------------------------------------------------TSCB
T ss_pred EEEeCC-CCEEEEEeccC----------------------------------------------------------CCcc
Confidence 888876 432110 0000 0011
Q ss_pred CCCeeEEEEcCCC-eEEEEeCC---------------CcEEEEECCCCeEEEEeecCCceEEEEEe----eCCCCEE-EE
Q 009614 388 SSEVLDLSWSKNG-FLLSSSAD---------------KTVRLWQVGIDRCLRVFSHNNYVTSVAFN----PVDDNYF-IS 446 (531)
Q Consensus 388 ~~~I~~l~~sp~~-~l~s~s~D---------------g~V~lwdl~~~~~l~~~~h~~~V~sv~fs----p~d~~~l-~s 446 (531)
...+.++++.++| ++++...+ +.|..||.. ++......+......++|+ | +++.+ ++
T Consensus 116 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~-dg~~l~v~ 193 (314)
T 1pjx_A 116 MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDG-RPYQLIVA 193 (314)
T ss_dssp CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTS-CEEEEEEE
T ss_pred ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCC-CCCEEEEE
Confidence 2357789999998 44444433 467777765 5555444455567899999 9 77655 44
Q ss_pred EeCCCeEEEEeCC-CCeE-----E-EecCCC-CceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccC
Q 009614 447 GSIDGKVRIWEVR-RCQV-----V-DYTDIR-EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKL 518 (531)
Q Consensus 447 gs~Dg~I~Iwd~~-~~~~-----~-~~~~~~-~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~ 518 (531)
...++.|.+||+. +++. . .+..+. ..+..+++.++|+++++...++.|.+||..+++.+..+..
T Consensus 194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~-------- 265 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-------- 265 (314)
T ss_dssp ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC--------
T ss_pred ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC--------
Confidence 4568899999986 4542 1 222333 5688999999999888887889999999987776554432
Q ss_pred CCceeeeEEEee
Q 009614 519 PGKRITGFQVVK 530 (531)
Q Consensus 519 ~~~~It~l~f~p 530 (531)
+...+++++|.|
T Consensus 266 ~~~~~~~i~~~~ 277 (314)
T 1pjx_A 266 PFEKPSNLHFKP 277 (314)
T ss_dssp SSSCEEEEEECT
T ss_pred CCCCceeEEECC
Confidence 124566776654
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=2.4e-08 Score=96.59 Aligned_cols=236 Identities=6% Similarity=0.009 Sum_probs=152.3
Q ss_pred ccccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEccc
Q 009614 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~ 315 (531)
..+.+++++++|.+.++...++.|.+|+.. .... .. .+..+...+.+|++.++|.++++...++.|..|+..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~--~~----~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKIT--EY----PLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE--EE----ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE--Ee----cCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 345578999999988877668999999877 3211 10 112345679999999999988887778899999975
Q ss_pred CccccceecC--CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeE
Q 009614 316 HERLDGFDVQ--DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (531)
Q Consensus 316 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~ 393 (531)
++ ...+... ...+..+.+. ....+.. .......+..++.. .... ......+...+..
T Consensus 87 g~-~~~~~~~~~~~~~~~i~~~--~~g~l~v--------------~~~~~~~i~~~d~~-g~~~---~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 87 GI-IKEYTLPNPDSAPYGITEG--PNGDIWF--------------TEMNGNRIGRITDD-GKIR---EYELPNKGSYPSF 145 (299)
T ss_dssp SC-EEEEECSSTTCCEEEEEEC--TTSCEEE--------------EETTTTEEEEECTT-CCEE---EEECSSTTCCEEE
T ss_pred Cc-EEEEeCCCcCCCceeeEEC--CCCCEEE--------------EecCCceEEEECCC-CCEE---EecCCCCCCCCce
Confidence 32 2222221 1112222222 1122221 11223445555541 1110 1111224457899
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCCeEEEE-ee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe--cC
Q 009614 394 LSWSKNG-FLLSSSADKTVRLWQVGIDRCLRV-FS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TD 468 (531)
Q Consensus 394 l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~-~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~--~~ 468 (531)
+++.+++ ++++...++.|..||. +++.... .. ....+.+++++| +++++++...++.|.+||. +++...+ ..
T Consensus 146 i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~ 222 (299)
T 2z2n_A 146 ITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPT 222 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred EEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCC
Confidence 9999998 5555556789999999 6665443 22 445688999999 8888777777889999999 6665443 33
Q ss_pred CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q 009614 469 IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 469 ~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l 504 (531)
....+.++++.++|+++++...++.|..||. ++++
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 257 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII 257 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECC-CCce
Confidence 4567899999999997666667889999998 4543
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.22 E-value=1.6e-09 Score=105.62 Aligned_cols=208 Identities=10% Similarity=-0.019 Sum_probs=132.0
Q ss_pred eEEcccCCCEEEEEEccCCC-EEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeecccccccccc
Q 009614 278 QEFLAHEGSILTMKFSLDGQ-YLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (531)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~-~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (531)
..+..+.....+++|+|+|+ +++++..++.|..|+..++ ...+......+..+.+.++. .++..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg--~l~v~----------- 85 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG--HLIAC----------- 85 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC--CEEEE-----------
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC--cEEEE-----------
Confidence 34555667788999999998 7888888999999999876 44444433333444433322 22221
Q ss_pred ccccCCCceEEEeCCccccccCcceeEeec-CCCCeeEEEEcCCC-eEEE----Ee-------------CCCcEEEEECC
Q 009614 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-HSSEVLDLSWSKNG-FLLS----SS-------------ADKTVRLWQVG 417 (531)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~I~~l~~sp~~-~l~s----~s-------------~Dg~V~lwdl~ 417 (531)
...+..+.+|+........ ......+ ....+.+++++|+| ++++ ++ ..+.|..++..
T Consensus 86 ---~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 86 ---SHGLRRLERQREPGGEWES-IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp ---ETTTTEEEEECSTTCCEEE-EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred ---ecCCCeEEEEcCCCCcEEE-EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 2223456666653322110 0001111 12356789999999 5555 22 12455556555
Q ss_pred CCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCC-CCeE---EE-ecCCCCceEEEEEccCCCEEEEEeCCC
Q 009614 418 IDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR-RCQV---VD-YTDIREIVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 418 ~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~-~~~~---~~-~~~~~~~v~~v~~spdg~~l~sgs~dg 492 (531)
++......+......++|+| +++++++.+.++.|++|++. ++++ .. +..+...+..+++.++|+++++. ++
T Consensus 162 -g~~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~ 237 (296)
T 3e5z_A 162 -GTLSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GD 237 (296)
T ss_dssp -SCEEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TT
T ss_pred -CCEEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CC
Confidence 55544445667789999999 88888888888999999997 4554 11 22344556789999999866665 78
Q ss_pred cEEEEeCCCCeEEEEee
Q 009614 493 NCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 493 ~I~iwd~~~~~l~~~~~ 509 (531)
.|.+||.. ++++..+.
T Consensus 238 ~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 238 GVHVLTPD-GDELGRVL 253 (296)
T ss_dssp EEEEECTT-SCEEEEEE
T ss_pred eEEEECCC-CCEEEEEE
Confidence 89999987 66665443
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.21 E-value=8.7e-10 Score=110.98 Aligned_cols=244 Identities=10% Similarity=-0.010 Sum_probs=152.2
Q ss_pred eeeeCCCCeEEeee----------cCCeEEEEeCCCCcccccccccceEEccc-------CCCEEEEEEccCCCEEEEEe
Q 009614 241 ATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTGQEFLAH-------EGSILTMKFSLDGQYLASGG 303 (531)
Q Consensus 241 ~~fspdg~~lasgs----------~dg~I~vwd~~~~~~~~~~~~~~~~l~~H-------~~~I~~l~fspdg~~Lasgs 303 (531)
++++|||+++.++. .++.|.+||..+.... .++.-. ...-..+.|+|||++|+.+.
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~-------~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan 155 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT-------ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 155 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE-------EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE-------EEEECCCccccccCCCCceEEEcCCCCEEEEEE
Confidence 89999999887765 4678999999864422 222111 12355789999999998886
Q ss_pred C--CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcc-ccccCcc
Q 009614 304 E--DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV-FRLLEKP 380 (531)
Q Consensus 304 ~--Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 380 (531)
. ++.|.++|+.+++.+..+.... |....+.....++.. +.++.+.+.+... .......
T Consensus 156 ~~~~~~VsVID~~t~~vv~tI~v~g----~~~~~P~g~~~~~~~---------------~~DG~~~~v~~~~~g~v~~~~ 216 (386)
T 3sjl_D 156 FSPAPAVGVVDLEGKAFKRMLDVPD----CYHIFPTAPDTFFMH---------------CRDGSLAKVAFGTEGTPEITH 216 (386)
T ss_dssp CSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEE---------------ETTSCEEEEECCSSSCCEEEE
T ss_pred cCCCCeEEEEECCCCcEEEEEECCC----cceeecCCCceeEEE---------------CCCCCEEEEECCCCCeEEEee
Confidence 4 6899999999999888876432 222222222112211 2222232222221 1110000
Q ss_pred eeEeecCCCCee-EEEEc-CCCeEEEEeCCCcEEEEECCCCe--EEEEee-----------cCCceEEEEEeeCCCCEEE
Q 009614 381 LHEFQGHSSEVL-DLSWS-KNGFLLSSSADKTVRLWQVGIDR--CLRVFS-----------HNNYVTSVAFNPVDDNYFI 445 (531)
Q Consensus 381 ~~~~~~h~~~I~-~l~~s-p~~~l~s~s~Dg~V~lwdl~~~~--~l~~~~-----------h~~~V~sv~fsp~d~~~l~ 445 (531)
...+......+. ...|. ++|.++..+.+|.|.+.|+.+.. .+..+. .......++++| +++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~-~~~~ly 295 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR-ALDRIY 295 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET-TTTEEE
T ss_pred cceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECC-CCCeEE
Confidence 000111112221 23554 56755557778999999997654 332221 122334577798 777666
Q ss_pred EEeC----------CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCC-EEEEEe-CCCcEEEEeCCCCeEEEEeeee
Q 009614 446 SGSI----------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK-GGIVGT-MTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 446 sgs~----------Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~-~l~sgs-~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
.... ...|.+.|+.+++++........+..|+++||++ +|++.. .++.|.++|+.+++++.+++..
T Consensus 296 V~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 296 LLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred EEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 6542 2579999999999997666666888999999997 666654 5899999999999999877643
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.21 E-value=5e-09 Score=111.77 Aligned_cols=197 Identities=10% Similarity=0.047 Sum_probs=143.0
Q ss_pred eeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc--cCcccc
Q 009614 243 LKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI--EHERLD 320 (531)
Q Consensus 243 fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~--~~~~~~ 320 (531)
.+|.+.++++...++.|.++|..+.... ..+.. ...+..+.|+|||++|++++.|+.|.+||+. +++.+.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~-------~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIK-------TVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEE-------EEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEE-------EEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE
Confidence 4455567778888999999998854422 22322 2356799999999999999999999999985 443221
Q ss_pred ceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEc---
Q 009614 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS--- 397 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~s--- 397 (531)
. +.. ......++++
T Consensus 235 ~--------------------------------------------------------------i~~-G~~P~~ia~s~~~ 251 (567)
T 1qks_A 235 E--------------------------------------------------------------IKI-GSEARSIETSKME 251 (567)
T ss_dssp E--------------------------------------------------------------EEC-CSEEEEEEECCST
T ss_pred E--------------------------------------------------------------Eec-CCCCceeEEcccc
Confidence 1 111 1234688999
Q ss_pred -CCC-eEEE-EeCCCcEEEEECCCCeEEEEeec------------CCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 398 -KNG-FLLS-SSADKTVRLWQVGIDRCLRVFSH------------NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 398 -p~~-~l~s-~s~Dg~V~lwdl~~~~~l~~~~h------------~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
|+| ++++ ...+++|.++|..+.+.++.+.- ...+..+.+++....+++....+|+|.++|....+
T Consensus 252 ~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~ 331 (567)
T 1qks_A 252 GWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN 331 (567)
T ss_dssp TCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS
T ss_pred CCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc
Confidence 688 5554 45669999999999999887641 12678899998444556666677999999998764
Q ss_pred EE--EecCCCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCCCeEEEEeee
Q 009614 463 VV--DYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 463 ~~--~~~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~~~l~~~~~~ 510 (531)
.+ ...........+.|+|+|++++++. .++.|.++|+.+++++..+.+
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 33 2333445677899999999987766 578899999999998877654
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.19 E-value=3.6e-10 Score=124.21 Aligned_cols=195 Identities=12% Similarity=0.018 Sum_probs=128.6
Q ss_pred eeeCCCCeEEeeecCC---eEEEE--eCCCCcccccccccc-eEEcccCCCEEEEEEccCCCEEE-----EEeCCCcEEE
Q 009614 242 TLKPGDHELTLGQRMR---RVRVH--PVKKQSRELSSLYTG-QEFLAHEGSILTMKFSLDGQYLA-----SGGEDGTVRV 310 (531)
Q Consensus 242 ~fspdg~~lasgs~dg---~I~vw--d~~~~~~~~~~~~~~-~~l~~H~~~I~~l~fspdg~~La-----sgs~Dg~I~i 310 (531)
..+|+|.+++....++ .-.+| +....... .+... ..-.+|...+..++|||||++|| .|+.+.+|++
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v 151 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEK--VLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHV 151 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCE--EEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcE--EEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEE
Confidence 3458888887665543 33444 43322211 11000 00124666799999999999998 4445678999
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
||+.+++..... .+.. ..
T Consensus 152 ~dl~tg~~~~~~------------------------------------------------------------~~~~--~~ 169 (695)
T 2bkl_A 152 IDVDSGEWSKVD------------------------------------------------------------VIEG--GK 169 (695)
T ss_dssp EETTTCCBCSSC------------------------------------------------------------CBSC--CT
T ss_pred EECCCCCCcCCc------------------------------------------------------------ccCc--cc
Confidence 999887632000 0000 01
Q ss_pred eeEEEEcCCC-eEEEEeCCCc-------------EEEEECCCCeE--EEEee---cCCceEEEEEeeCCCCEEEEEeCCC
Q 009614 391 VLDLSWSKNG-FLLSSSADKT-------------VRLWQVGIDRC--LRVFS---HNNYVTSVAFNPVDDNYFISGSIDG 451 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s~Dg~-------------V~lwdl~~~~~--l~~~~---h~~~V~sv~fsp~d~~~l~sgs~Dg 451 (531)
...++|+|+| .|+.++.|.. |++|++.+++. ...+. +...+..+.|+| ++++|+.++.++
T Consensus 170 ~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~ 248 (695)
T 2bkl_A 170 YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRG 248 (695)
T ss_dssp TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEET
T ss_pred ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCC
Confidence 2578999999 8888888776 99999998762 23332 456789999999 899888877666
Q ss_pred ----eEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeC----CCcEEEEeCCCCe
Q 009614 452 ----KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTM----TGNCRFYDIKDNQ 503 (531)
Q Consensus 452 ----~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~----dg~I~iwd~~~~~ 503 (531)
.|++|+..+++...+..+...+....+ ++|. |+..+. ++.|.+||+.+++
T Consensus 249 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 249 WSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 788888777666666666666666667 6777 555443 5789999998764
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.18 E-value=3.5e-09 Score=116.60 Aligned_cols=200 Identities=9% Similarity=-0.011 Sum_probs=136.0
Q ss_pred ccceeeeCCCCeEEeeecCCe----------------EEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEE
Q 009614 238 HGSATLKPGDHELTLGQRMRR----------------VRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLAS 301 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg~----------------I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Las 301 (531)
+..++|+|||+.|+.++.++. |++|++.+...... .......|...+..+.|+|||++|+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~---~v~~~~~~~~~~~~~~~SpDg~~l~~ 249 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI---LCAEFPDEPKWMGGAELSDDGRYVLL 249 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE---EEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce---EEeccCCCCeEEEEEEEcCCCCEEEE
Confidence 556899999999998887765 99999976543211 00011235666889999999999988
Q ss_pred EeC-----CCcEEEEEccc------CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeC
Q 009614 302 GGE-----DGTVRVWKVIE------HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLP 370 (531)
Q Consensus 302 gs~-----Dg~I~iWd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (531)
++. +..|.+||+.+ +..
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~---------------------------------------------------- 277 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGIL---------------------------------------------------- 277 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSC----------------------------------------------------
T ss_pred EEEccCCCccEEEEEECcccccccCCcc----------------------------------------------------
Confidence 765 56788888865 210
Q ss_pred CccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCC----CcEEEEECCCCe---EEEEeecCC--ceEEEEEeeCC
Q 009614 371 PKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD----KTVRLWQVGIDR---CLRVFSHNN--YVTSVAFNPVD 440 (531)
Q Consensus 371 ~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~D----g~V~lwdl~~~~---~l~~~~h~~--~V~sv~fsp~d 440 (531)
....+..+...+.. .|+|+| .|+..+.. ..|.+||+.++. ....+.|.. .+..++|++ +
T Consensus 278 ---------~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ 346 (710)
T 2xdw_A 278 ---------KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-S 346 (710)
T ss_dssp ---------CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-T
T ss_pred ---------ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-C
Confidence 01122233334433 477777 55554443 369999998764 233444443 688899987 7
Q ss_pred CCEEEEEeCCCe--EEEEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEEeC----CCcEEEEeCCCCe
Q 009614 441 DNYFISGSIDGK--VRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTM----TGNCRFYDIKDNQ 503 (531)
Q Consensus 441 ~~~l~sgs~Dg~--I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sgs~----dg~I~iwd~~~~~ 503 (531)
+.++++...|+. |.+|++.+++.+ .+..+...+..++++|++..|+.... .+.|++||+.+++
T Consensus 347 ~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 347 NFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 788888888884 666787666644 45556677889999999987664432 4689999998876
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.18 E-value=1.6e-08 Score=98.78 Aligned_cols=212 Identities=12% Similarity=0.102 Sum_probs=139.4
Q ss_pred ceeeeCC-CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcc
Q 009614 240 SATLKPG-DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (531)
Q Consensus 240 s~~fspd-g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~ 318 (531)
...|+|+ +.++++....+.|..|+....... ...+...+.+++++++|+++++ . ++.|.+||..+++.
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~---------~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ---------RVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSA 85 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTCCEE---------EEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCcEE---------EEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcE
Confidence 4688985 456667777899999998754321 1123567999999999995554 3 56788999876542
Q ss_pred ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcC
Q 009614 319 LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK 398 (531)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp 398 (531)
....... .......+++++++|
T Consensus 86 ~~~~~~~----------------------------------------------------------~~~~~~~~~di~~d~ 107 (297)
T 3g4e_A 86 VVLATVD----------------------------------------------------------NDKKNNRFNDGKVDP 107 (297)
T ss_dssp EEEEECC----------------------------------------------------------TTCSSEEEEEEEECT
T ss_pred EEEEecC----------------------------------------------------------CCCCCCCCCCEEECC
Confidence 1100000 000123467899999
Q ss_pred CCeEEEEe-C---------CCcEEEEECCC-CeEEEEeecCCceEEEEEeeCCCCEE-EEEeCCCeEEEEeC--CCCeEE
Q 009614 399 NGFLLSSS-A---------DKTVRLWQVGI-DRCLRVFSHNNYVTSVAFNPVDDNYF-ISGSIDGKVRIWEV--RRCQVV 464 (531)
Q Consensus 399 ~~~l~s~s-~---------Dg~V~lwdl~~-~~~l~~~~h~~~V~sv~fsp~d~~~l-~sgs~Dg~I~Iwd~--~~~~~~ 464 (531)
+|.|+.++ . .....||.+.. ++......+....+.++|+| +++.| ++.+.++.|.+|++ .++.+.
T Consensus 108 dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~ 186 (297)
T 3g4e_A 108 AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQIS 186 (297)
T ss_dssp TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEE
T ss_pred CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCccc
Confidence 99333333 1 13345555543 34444444555678999999 88755 55566889999987 455432
Q ss_pred ------EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEe
Q 009614 465 ------DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVV 529 (531)
Q Consensus 465 ------~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~ 529 (531)
.+......+..+++.++|++.++....+.|..||..+++++..+... ...+++++|.
T Consensus 187 ~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p--------~~~~t~~~f~ 249 (297)
T 3g4e_A 187 NRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP--------VDKTTSCCFG 249 (297)
T ss_dssp EEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS--------SSBEEEEEEE
T ss_pred CcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC--------CCCceEEEEe
Confidence 12233456889999999988877777888999999999988766532 3467888886
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=8.3e-09 Score=110.03 Aligned_cols=260 Identities=12% Similarity=0.075 Sum_probs=161.6
Q ss_pred ceeeeCCCCeEEeeecCCeEEEEeCC--CCcccccccccceEEcccCCCEEEEEEc----cCCCEEEEEeC-CCcEEEEE
Q 009614 240 SATLKPGDHELTLGQRMRRVRVHPVK--KQSRELSSLYTGQEFLAHEGSILTMKFS----LDGQYLASGGE-DGTVRVWK 312 (531)
Q Consensus 240 s~~fspdg~~lasgs~dg~I~vwd~~--~~~~~~~~~~~~~~l~~H~~~I~~l~fs----pdg~~Lasgs~-Dg~I~iWd 312 (531)
.+.|+|||+++++++.++.|.+||+. +... ...+.... ....++|+ |||++++++.. +++|.|+|
T Consensus 201 ~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~-------v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 201 ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT-------VAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCCE-------EEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred ceEECCCCCEEEEEcCCCeEEEEECCCCCCcE-------eEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 58999999999999999999999985 2221 12343322 35789999 69999888765 59999999
Q ss_pred cccCccccceecCCC-----------CCeeEEEeec---------CCcceeeeeccccc-----------c---------
Q 009614 313 VIEHERLDGFDVQDT-----------DPSCLYFTIN---------HLSQLIPIDVDKEK-----------I--------- 352 (531)
Q Consensus 313 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~---------~~~~~~~~~~~~~~-----------~--------- 352 (531)
..+.+.+..+..... .+..+..+.. ..+.+..++..... .
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd 352 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 352 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCC
Confidence 998887776654211 1112222211 11222222221110 0
Q ss_pred ccccccccCCCceEEEeCCccccccCccee-EeecCCCCeeEEEEcCCC--eEEEEe-CCCcEEEEECCC-------CeE
Q 009614 353 DKTKSLRKSSDLTCVVLPPKVFRLLEKPLH-EFQGHSSEVLDLSWSKNG--FLLSSS-ADKTVRLWQVGI-------DRC 421 (531)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~I~~l~~sp~~--~l~s~s-~Dg~V~lwdl~~-------~~~ 421 (531)
.....+....+..+.+++.....+....-. ....|.+.-..+ ++|++ .++++. .+++|.++|..+ .+.
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 011112233445566666665433211100 011244322222 57875 444554 568999999987 567
Q ss_pred EEEeecC-CceEEEEEeeCCCCEEEEEeC-------CCeEEEEeCCCC---------eEEEe---c---CCCCceEEEEE
Q 009614 422 LRVFSHN-NYVTSVAFNPVDDNYFISGSI-------DGKVRIWEVRRC---------QVVDY---T---DIREIVSAVCY 478 (531)
Q Consensus 422 l~~~~h~-~~V~sv~fsp~d~~~l~sgs~-------Dg~I~Iwd~~~~---------~~~~~---~---~~~~~v~~v~~ 478 (531)
++.+... ..-..|..+| +++++.+... .+.|.|+|+.+. +++.. . .....+..+.|
T Consensus 432 v~~i~~~g~g~~~i~~~p-~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHP-NSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEF 510 (567)
T ss_dssp EEEEECSCSCCCCEECCT-TCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEE
T ss_pred EEEEecCCCCCEEEEeCC-CCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeE
Confidence 7777633 3334577899 8888888663 359999999876 33321 1 12457899999
Q ss_pred ccCCCEEEEEeC-----CCcEEEEeCCCCeEEEEee
Q 009614 479 CPDGKGGIVGTM-----TGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 479 spdg~~l~sgs~-----dg~I~iwd~~~~~l~~~~~ 509 (531)
+|+|+++.++.. ++.|.|+|..+++++..++
T Consensus 511 ~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 511 NKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp CTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 999998887643 7899999999999987765
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.15 E-value=3e-09 Score=117.72 Aligned_cols=200 Identities=10% Similarity=-0.013 Sum_probs=126.7
Q ss_pred cccceeeeCCCCeEEeeecC-----CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCc----
Q 009614 237 RHGSATLKPGDHELTLGQRM-----RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT---- 307 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~d-----g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~---- 307 (531)
.+...+|+|||++||.+..+ ..|++||+.++.... ...+...+..++|+|| +.|+.++.|+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~--------~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA--------DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE--------EEEEEEESCCCEESTT-SEEEEEECCCC----
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC--------ccCCCceeccEEEECC-CEEEEEEecCccccc
Confidence 34467999999999876554 469999998665321 1111112357899999 99988887664
Q ss_pred ----------EEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccccc
Q 009614 308 ----------VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL 377 (531)
Q Consensus 308 ----------I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (531)
|++|++.++....
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~--------------------------------------------------------- 257 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSAD--------------------------------------------------------- 257 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGC---------------------------------------------------------
T ss_pred ccccCCCCCEEEEEECCCCchhC---------------------------------------------------------
Confidence 4455543332100
Q ss_pred CcceeEeecCCCCeeEEEEcCCC-eEEEEeCC-----CcEEEEECCCC--e-EEEEeecCCceEEEEEeeCCCCEEEEEe
Q 009614 378 EKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD-----KTVRLWQVGID--R-CLRVFSHNNYVTSVAFNPVDDNYFISGS 448 (531)
Q Consensus 378 ~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~D-----g~V~lwdl~~~--~-~l~~~~h~~~V~sv~fsp~d~~~l~sgs 448 (531)
..+.....+...+..+.|+|+| +|+..+.+ ..|.+||+.++ + ......+...+.... .| +++.|+..+
T Consensus 258 -~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~-dg~~l~~~s 334 (741)
T 1yr2_A 258 -QPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DG-VGDQLWFVS 334 (741)
T ss_dssp -EEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EE-ETTEEEEEE
T ss_pred -EEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-ec-cCCEEEEEE
Confidence 0011112234457899999999 66666644 37999999877 4 333334555555553 47 788777776
Q ss_pred C----CCeEEEEeCCCC--eEEEe-cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCC-CCeEEE
Q 009614 449 I----DGKVRIWEVRRC--QVVDY-TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK-DNQLYQ 506 (531)
Q Consensus 449 ~----Dg~I~Iwd~~~~--~~~~~-~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~-~~~l~~ 506 (531)
. ++.|.+||+.++ ....+ ..+...+..++|. ++.++++...+|..+||.+. +++...
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 5 356999999874 44443 3344456677887 66778888889987777554 344443
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.14 E-value=5.8e-09 Score=100.96 Aligned_cols=189 Identities=10% Similarity=0.081 Sum_probs=136.8
Q ss_pred CCCEEEEEeCCCcEEEEEcccCccccceecCC-CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcc
Q 009614 295 DGQYLASGGEDGTVRVWKVIEHERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV 373 (531)
Q Consensus 295 dg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (531)
.+++|++++.|+.|.+||..+++.+..+.... ..+..+.+.++. .++. +.+..+..+++ .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG--~ilv----------------s~~~~V~~~d~-~ 64 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG--EILF----------------SYSKGAKMITR-D 64 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS--CEEE----------------ECBSEEEEECT-T
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC--CEEE----------------eCCCCEEEECC-C
Confidence 46789999999999999999999988887654 244445544433 1221 11233555554 2
Q ss_pred ccccCcceeEeecC-CCCeeEEEEcCCC-eEEEEeC-CCcEEEEECCCCeEEEEeec-------CCceEEEEEeeCCCCE
Q 009614 374 FRLLEKPLHEFQGH-SSEVLDLSWSKNG-FLLSSSA-DKTVRLWQVGIDRCLRVFSH-------NNYVTSVAFNPVDDNY 443 (531)
Q Consensus 374 ~~~~~~~~~~~~~h-~~~I~~l~~sp~~-~l~s~s~-Dg~V~lwdl~~~~~l~~~~h-------~~~V~sv~fsp~d~~~ 443 (531)
.+.+..+..+ ...+.++.+.++| ++++.+. ++.|..+|. +++.+..+.. ......+++.+ ++++
T Consensus 65 ----G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~ 138 (276)
T 3no2_A 65 ----GRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNY 138 (276)
T ss_dssp ----SCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCE
T ss_pred ----CCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCE
Confidence 2334555544 3468889999999 7777776 777888875 6777766641 12345567888 9999
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 444 FISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 444 l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
+++...++.|..||.. ++.+-.......+.++...++|++++++..++.|..+|..+|+++.++.
T Consensus 139 lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 139 LVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 9999999999999998 7776433334556778889999999999988899999999999988775
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.14 E-value=9.9e-09 Score=103.41 Aligned_cols=216 Identities=9% Similarity=0.043 Sum_probs=132.3
Q ss_pred ccceeeeCCCCeEEeeec--CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCC-CEEEEEeCCCcEEEEEcc
Q 009614 238 HGSATLKPGDHELTLGQR--MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDG-QYLASGGEDGTVRVWKVI 314 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~--dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg-~~Lasgs~Dg~I~iWd~~ 314 (531)
...++|+|+|++|+++.. ++.|.+||....... ..+..+ .....+.+.|++ ..+++.+.||.+.+|++.
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~-------~~~i~~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV-------EDVTAA-AGCWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE-------EEEGGG-TTEEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE-------EEEecC-CCcceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 445899999999988764 589999999865321 120112 223345677865 678888899999999986
Q ss_pred c-Cccccce------ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee--
Q 009614 315 E-HERLDGF------DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ-- 385 (531)
Q Consensus 315 ~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 385 (531)
. ++..... ..... +..+...+... . .+..+.++.+.+++...-... .+..+.
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~-~---------------~~~~~~~~~v~v~d~~~~~~~--~~~~~~~~ 242 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDD-PIFIAPALDKD-K---------------AHFVSYYGNVYSADFSGDEVK--VDGPWSLL 242 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTS-CBCSCCEECSS-E---------------EEEEBTTSEEEEEECSSSSCE--EEEEEESC
T ss_pred CCCcEeeeccccceEcCCCC-ceEEEecccCC-E---------------EEEEeCCCeEEEEEecCCCce--eccccccc
Confidence 5 3322111 10000 00000000000 0 000111233444433211000 000000
Q ss_pred ----cC----CCCeeEEEEcCCC-eEEEEeC-----------CCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEE
Q 009614 386 ----GH----SSEVLDLSWSKNG-FLLSSSA-----------DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFI 445 (531)
Q Consensus 386 ----~h----~~~I~~l~~sp~~-~l~s~s~-----------Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~ 445 (531)
.+ ......++++|++ .++.+.. ...|.+||+.+++.+..+.-.. +.+|+|+| ++++|+
T Consensus 243 ~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~sp-dg~~l~ 320 (361)
T 2oiz_A 243 NDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQ-QRNLML 320 (361)
T ss_dssp CHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEET-TTTEEE
T ss_pred CccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECC-CCCEEE
Confidence 00 1122237889987 5554432 3589999999999999987445 99999999 999999
Q ss_pred EEeCCCeEEEEeCCCC--eEEEe-cCCCCceEEEEEccCCC
Q 009614 446 SGSIDGKVRIWEVRRC--QVVDY-TDIREIVSAVCYCPDGK 483 (531)
Q Consensus 446 sgs~Dg~I~Iwd~~~~--~~~~~-~~~~~~v~~v~~spdg~ 483 (531)
+++. +.|.|||+.++ +++.. ..+......++++|+|.
T Consensus 321 v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 321 TLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 8887 99999999999 88875 57788889999999986
No 201
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=1.6e-08 Score=103.66 Aligned_cols=234 Identities=14% Similarity=0.057 Sum_probs=147.7
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCC--cEEEEEcc
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG--TVRVWKVI 314 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg--~I~iWd~~ 314 (531)
....++|++++.++++...++.|++|+........ .... ..... ++|+++++.|+++..++ .|.+|+..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-------~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-------VHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE-------EEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE-------eecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 34468999999988888888999999987543221 1112 22233 89999999999988866 78888876
Q ss_pred cCccccce----ecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE--eecCC
Q 009614 315 EHERLDGF----DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE--FQGHS 388 (531)
Q Consensus 315 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~ 388 (531)
++.....+ ......+..+.+.+... .++. ...++.++.|+...... ..+.. ..++.
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g-~lyv---------------~d~~~~I~~~d~~~~~~--~~~~~~~~~g~~ 264 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEE-WLYF---------------VDSNKNFGRFNVKTQEV--TLIKQLELSGSL 264 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSS-EEEE---------------ECTTCEEEEEETTTCCE--EEEEECCCCSCC
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCC-eEEE---------------EECCCcEEEEECCCCCE--EEEecccccCCC
Confidence 65432222 10222333333333211 1111 11233455554432110 00000 11222
Q ss_pred CCe--eEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEeecC---------------CceEEEEEeeCCCCEEEEEe-
Q 009614 389 SEV--LDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFSHN---------------NYVTSVAFNPVDDNYFISGS- 448 (531)
Q Consensus 389 ~~I--~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~---------------~~V~sv~fsp~d~~~l~sgs- 448 (531)
..- ..++|+|+ + ++++....+.|+.|+.... ......+. .....|+++| +++++++-.
T Consensus 265 ~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~ 342 (409)
T 3hrp_A 265 GTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGF 342 (409)
T ss_dssp CCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETT
T ss_pred CCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCC
Confidence 222 39999995 5 5666667889999997654 22222222 3578999999 888888888
Q ss_pred CCCeEEEEeCCCCeEEEecCC---------------CCceEEEEEccCCCEEEEEeCCCcEEEEeC
Q 009614 449 IDGKVRIWEVRRCQVVDYTDI---------------REIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 449 ~Dg~I~Iwd~~~~~~~~~~~~---------------~~~v~~v~~spdg~~l~sgs~dg~I~iwd~ 499 (531)
.++.|+.|++.++.+..+.++ -.....|++.|+|.++++-..+++|+.+++
T Consensus 343 ~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 343 KGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 889999999888887765544 245889999999888888888888888775
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.13 E-value=8.6e-08 Score=92.59 Aligned_cols=232 Identities=5% Similarity=0.003 Sum_probs=144.6
Q ss_pred ccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc
Q 009614 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~ 317 (531)
+..++++++|.+.++...++.|..|+....... . .+..+...+.+|++.++|+++++...++.|.+||. +++
T Consensus 59 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~---~----~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 59 VMCLTISSDGEVWFTENAANKIGRITKKGIIKE---Y----TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTSCEEE---E----ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred eeeEEECCCCCEEEeCCCCCeEEEECCCCcEEE---E----eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 445789999998888777889999987521111 0 11224557899999999988888777889999998 443
Q ss_pred cccceecC--CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEE
Q 009614 318 RLDGFDVQ--DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (531)
Q Consensus 318 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~ 395 (531)
.. .+... ...+..+.+. ....+.. .......+..++. ...+. ......+...+..++
T Consensus 131 ~~-~~~~~~~~~~~~~i~~~--~~g~l~v--------------~~~~~~~i~~~~~-~g~~~---~~~~~~~~~~~~~i~ 189 (299)
T 2z2n_A 131 IR-EYELPNKGSYPSFITLG--SDNALWF--------------TENQNNAIGRITE-SGDIT---EFKIPTPASGPVGIT 189 (299)
T ss_dssp EE-EEECSSTTCCEEEEEEC--TTSCEEE--------------EETTTTEEEEECT-TCCEE---EEECSSTTCCEEEEE
T ss_pred EE-EecCCCCCCCCceEEEc--CCCCEEE--------------EeCCCCEEEEEcC-CCcEE---EeeCCCCCCcceeEE
Confidence 22 22111 1112222221 1122221 1122344555554 21110 011223445688999
Q ss_pred EcCCC-eEEEEeCCCcEEEEECCCCeEEEE-ee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe--cCCC
Q 009614 396 WSKNG-FLLSSSADKTVRLWQVGIDRCLRV-FS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDIR 470 (531)
Q Consensus 396 ~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~-~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~--~~~~ 470 (531)
+.+++ ++++...++.|.+||. +++.... .. +...+.+|+++| +++++++...++.|.+||. +++...+ ..+.
T Consensus 190 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~ 266 (299)
T 2z2n_A 190 KGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKS 266 (299)
T ss_dssp ECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET-TTEEEEEECSSSS
T ss_pred ECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC-CCceEEEeCCCCC
Confidence 99998 5555556789999999 6654332 11 446789999999 8887777667899999999 4555443 3445
Q ss_pred CceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 471 ~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
..+.++++ ++|.++++.. .+.+..++..+++
T Consensus 267 ~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 267 AEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp CCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 67899999 8888666655 5677788876654
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.12 E-value=4.6e-09 Score=104.33 Aligned_cols=203 Identities=7% Similarity=-0.049 Sum_probs=137.6
Q ss_pred ecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEE
Q 009614 254 QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLY 333 (531)
Q Consensus 254 s~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~ 333 (531)
+.++.|.++|..+...... .+....-.........+.+. +++++++...++.|.+||..+++.+..+.
T Consensus 14 ~~~~~l~~~d~~t~~~~~~-i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~---------- 81 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENE-VFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT---------- 81 (328)
T ss_dssp SCCBEEEEEETTTTEEECS-HHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE----------
T ss_pred CCCceEEEEECCCCEEhhh-hHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC----------
Confidence 3489999999986553221 11100000112346778874 45555666668999999998876533321
Q ss_pred EeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEe-CCCcEE
Q 009614 334 FTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSS-ADKTVR 412 (531)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s-~Dg~V~ 412 (531)
.......+++++++.++.+. .++.|.
T Consensus 82 -----------------------------------------------------~~~~p~~i~~~~~g~lyv~~~~~~~v~ 108 (328)
T 3dsm_A 82 -----------------------------------------------------GFTSPRYIHFLSDEKAYVTQIWDYRIF 108 (328)
T ss_dssp -----------------------------------------------------CCSSEEEEEEEETTEEEEEEBSCSEEE
T ss_pred -----------------------------------------------------CCCCCcEEEEeCCCeEEEEECCCCeEE
Confidence 12456788888888555554 889999
Q ss_pred EEECCCCeEEEEeecCC------ceEEEEEeeCCCCEEEEEe-CCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEE
Q 009614 413 LWQVGIDRCLRVFSHNN------YVTSVAFNPVDDNYFISGS-IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGG 485 (531)
Q Consensus 413 lwdl~~~~~l~~~~h~~------~V~sv~fsp~d~~~l~sgs-~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l 485 (531)
+||..+++....+.... ....|++ . ++.++++.. .++.|.+||+.+++++...........++++|+|+++
T Consensus 109 ~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 109 IINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMW 186 (328)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEE
T ss_pred EEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEE
Confidence 99999999888776443 5667787 4 555555554 4899999999999887654445566789999999977
Q ss_pred EEEeCC----------CcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEee
Q 009614 486 IVGTMT----------GNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVVK 530 (531)
Q Consensus 486 ~sgs~d----------g~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~p 530 (531)
+++..+ +.|.+||..++++...+.+.. +....+++|+|
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-------g~~p~~la~~~ 234 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-------GDWPSEVQLNG 234 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-------TCCCEEEEECT
T ss_pred EEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-------CCCceeEEEec
Confidence 776554 789999999998876654321 12446666654
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.10 E-value=1.8e-07 Score=90.40 Aligned_cols=236 Identities=6% Similarity=-0.007 Sum_probs=151.3
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
...++++.++|.+.++...++.|.+|+.. .... .. .+..+...+.+|++.++|+++++...++.|..||.. +
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~--~~----~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK--EF----EVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EE----ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-CceE--EE----ECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34468899999988887778999999876 2221 10 122344679999999999988877778889999987 4
Q ss_pred ccccceecC--CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEE
Q 009614 317 ERLDGFDVQ--DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (531)
Q Consensus 317 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l 394 (531)
+. ..+... ...+..+.+. ....+... ......+..++.. .... ...+......+..+
T Consensus 93 ~~-~~~~~~~~~~~~~~i~~~--~~g~l~v~--------------~~~~~~i~~~~~~-g~~~---~~~~~~~~~~~~~i 151 (300)
T 2qc5_A 93 GF-TEYPLPQPDSGPYGITEG--LNGDIWFT--------------QLNGDRIGKLTAD-GTIY---EYDLPNKGSYPAFI 151 (300)
T ss_dssp CE-EEEECSSTTCCEEEEEEC--STTCEEEE--------------ETTTTEEEEECTT-SCEE---EEECSSTTCCEEEE
T ss_pred Ce-EEecCCCCCCCCccceEC--CCCCEEEE--------------ccCCCeEEEECCC-CCEE---EccCCCCCCCceeE
Confidence 43 222221 1112222222 22222221 1223345555443 1111 11122234578899
Q ss_pred EEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--ecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe--cCC
Q 009614 395 SWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDI 469 (531)
Q Consensus 395 ~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~--~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~--~~~ 469 (531)
++.+++ ++++...++.|..||. +++..... .+...+.++++++ +++++++....+.|.+|+. +++.... ...
T Consensus 152 ~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~ 228 (300)
T 2qc5_A 152 TLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTP 228 (300)
T ss_dssp EECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred EECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCC
Confidence 999998 5555555788999998 55544322 1345689999999 8888877777789999999 5554433 334
Q ss_pred CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 470 REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 470 ~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
...+.++++.++|++.++...++.|..|+. +++..
T Consensus 229 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 263 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ 263 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE
T ss_pred CCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE
Confidence 567899999999997776666789999998 45443
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.09 E-value=5.9e-08 Score=96.15 Aligned_cols=209 Identities=14% Similarity=0.087 Sum_probs=134.2
Q ss_pred ceeeeCCC-CeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcc
Q 009614 240 SATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (531)
Q Consensus 240 s~~fspdg-~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~ 318 (531)
...|+|++ .+++++..++.|.+|+....... .+ .+...|.++.|+++|+++++. .++ |.+||..+++.
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~--------~~-~~~~~v~~i~~~~dg~l~v~~-~~g-l~~~d~~~g~~ 121 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILERELHELHLASGRKT--------VH-ALPFMGSALAKISDSKQLIAS-DDG-LFLRDTATGVL 121 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE--------EE-ECSSCEEEEEEEETTEEEEEE-TTE-EEEEETTTCCE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEECCCCcEE--------EE-ECCCcceEEEEeCCCeEEEEE-CCC-EEEEECCCCcE
Confidence 46899974 45667777899999998754321 11 134579999999999877754 444 88888766542
Q ss_pred ccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcC
Q 009614 319 LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK 398 (531)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp 398 (531)
.. +.... .......+.+++++|
T Consensus 122 ~~-~~~~~---------------------------------------------------------~~~~~~~~~~i~~d~ 143 (326)
T 2ghs_A 122 TL-HAELE---------------------------------------------------------SDLPGNRSNDGRMHP 143 (326)
T ss_dssp EE-EECSS---------------------------------------------------------TTCTTEEEEEEEECT
T ss_pred EE-EeeCC---------------------------------------------------------CCCCCCCCCCEEECC
Confidence 10 00000 000123477899999
Q ss_pred CCeEEEEeC-------CCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEE-EeCCCeEEEEeCC--CC-e-----
Q 009614 399 NGFLLSSSA-------DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFIS-GSIDGKVRIWEVR--RC-Q----- 462 (531)
Q Consensus 399 ~~~l~s~s~-------Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~s-gs~Dg~I~Iwd~~--~~-~----- 462 (531)
+|.++.++. .+.|..++ +++......+......++|+| +++.++. .+.++.|.+|++. ++ .
T Consensus 144 ~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~ 220 (326)
T 2ghs_A 144 SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE 220 (326)
T ss_dssp TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE
T ss_pred CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCce
Confidence 993333332 24455555 555444334445678999999 8876644 4567899999986 55 2
Q ss_pred EE-EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccccCCCceeeeEEEe
Q 009614 463 VV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKKKLPGKRITGFQVV 529 (531)
Q Consensus 463 ~~-~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~kk~~~~~It~l~f~ 529 (531)
.+ .+......+..+++.++|.+.++...++.|.+||. +++++..+.. +...+++++|.
T Consensus 221 ~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~--------~~~~~~~~af~ 279 (326)
T 2ghs_A 221 VFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV--------PGKQTTCPAFI 279 (326)
T ss_dssp EEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC--------SCSBEEEEEEE
T ss_pred EEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC--------CCCCcEEEEEe
Confidence 22 22233456788999999987777766788999998 5666654432 23467888876
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.05 E-value=1.1e-08 Score=104.64 Aligned_cols=242 Identities=9% Similarity=-0.048 Sum_probs=149.8
Q ss_pred ceeeeCCCCeEEeee----------cCCeEEEEeCCCCcccccccccceEEc-c------cCCCEEEEEEccCCCEEEEE
Q 009614 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTGQEFL-A------HEGSILTMKFSLDGQYLASG 302 (531)
Q Consensus 240 s~~fspdg~~lasgs----------~dg~I~vwd~~~~~~~~~~~~~~~~l~-~------H~~~I~~l~fspdg~~Lasg 302 (531)
.++++|||+++.++. .++.|.++|..+.... ..+. + .......+.|+|||++|+.+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv-------~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~ 194 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPI-------ADIELPDAPRFLVGTYQWMNALTPDNKNLLFY 194 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE-------EEEEETTCCCCCBSCCGGGSEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEE-------EEEECCCccccccCCCcceEEEcCCCCEEEEE
Confidence 589999999988775 4678999998865432 1221 1 01234578999999999988
Q ss_pred eC--CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcc
Q 009614 303 GE--DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (531)
Q Consensus 303 s~--Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (531)
.. ++.|.+.|+.+++.+..+.... +....+.....++... .++.+.+.+..........
T Consensus 195 n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~~---------------~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 195 QFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMNC---------------RDGSLARVDFADGETKVTN 255 (426)
T ss_dssp ECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEE---------------TTSSEEEEECCTTCCEEEE
T ss_pred ecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEEc---------------CCCCEEEEECCCCcEEEEe
Confidence 74 5789999999999887776532 1112221111111111 1222222211110000000
Q ss_pred eeEeecCCCCe-eEEEEcCCC-eEEEEeCCCcEEEEECCCCeEE--EEee-----------cCCceEEEEEeeCCCCEEE
Q 009614 381 LHEFQGHSSEV-LDLSWSKNG-FLLSSSADKTVRLWQVGIDRCL--RVFS-----------HNNYVTSVAFNPVDDNYFI 445 (531)
Q Consensus 381 ~~~~~~h~~~I-~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l--~~~~-----------h~~~V~sv~fsp~d~~~l~ 445 (531)
...+.....++ ..+.+.+++ .++..+..+.|.+.|+...... ..+. .......++++| +++.++
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~-dg~rly 334 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR-QSDRIY 334 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG-GGTEEE
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC-CCCEEE
Confidence 00011111111 235677877 6666677889999998765422 1111 111222378999 777665
Q ss_pred EEeC----------CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCC-EEEEEe-CCCcEEEEeCCCCeEEEEe
Q 009614 446 SGSI----------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK-GGIVGT-MTGNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 446 sgs~----------Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~-~l~sgs-~dg~I~iwd~~~~~l~~~~ 508 (531)
+... ++.|.++|+.+.+++...........++|+|||+ +++++. .++.|.++|+.+++.+.++
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 5432 3579999999999987555555789999999999 888888 4899999999999998775
No 207
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.02 E-value=5.7e-08 Score=92.70 Aligned_cols=196 Identities=12% Similarity=-0.038 Sum_probs=125.6
Q ss_pred CEEEEEEccCCCEEE-EEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCc
Q 009614 286 SILTMKFSLDGQYLA-SGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (531)
Q Consensus 286 ~I~~l~fspdg~~La-sgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (531)
...+|+++++|++++ +...++.|.+|+..+.............+..+.+.++. .++.. .. ++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g--~l~v~--------------~~-~~ 87 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG--TVYVT--------------DF-NN 87 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTC--CEEEE--------------ET-TT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCC--CEEEE--------------cC-CC
Confidence 678999999999777 44678999999976544221111111223333333221 12211 11 34
Q ss_pred eEEEeCCccccccCcceeEee-cCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCC
Q 009614 365 TCVVLPPKVFRLLEKPLHEFQ-GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDD 441 (531)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~-~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~ 441 (531)
.+..|+..... ...+. .....+..+++.++| ++++...++.|.+|+..+....... .....+.+|+++| ++
T Consensus 88 ~i~~~d~~~~~-----~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g 161 (270)
T 1rwi_B 88 RVVTLAAGSNN-----QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SG 161 (270)
T ss_dssp EEEEECTTCSC-----CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TC
T ss_pred EEEEEeCCCce-----EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CC
Confidence 55666544321 11122 233568899999998 6666667889999987655443222 2334678999999 88
Q ss_pred CEEEEEeCCCeEEEEeCCCCeEEEe-cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q 009614 442 NYFISGSIDGKVRIWEVRRCQVVDY-TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 442 ~~l~sgs~Dg~I~Iwd~~~~~~~~~-~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l 504 (531)
+++++...++.|.+||......... ......+..+++.++|.++++...++.|.+|+..+...
T Consensus 162 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 162 NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 8888877789999999988776543 23336789999999998777777788999999876543
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.96 E-value=1.4e-07 Score=91.96 Aligned_cols=112 Identities=10% Similarity=0.081 Sum_probs=82.1
Q ss_pred CCeeEEEEc----CCC-eEEEE-eCCCcEEEEECC-CCeE-----EEEee-cC-CceEEEEEeeCCCCEEEEEeCCCeEE
Q 009614 389 SEVLDLSWS----KNG-FLLSS-SADKTVRLWQVG-IDRC-----LRVFS-HN-NYVTSVAFNPVDDNYFISGSIDGKVR 454 (531)
Q Consensus 389 ~~I~~l~~s----p~~-~l~s~-s~Dg~V~lwdl~-~~~~-----l~~~~-h~-~~V~sv~fsp~d~~~l~sgs~Dg~I~ 454 (531)
.....++|+ |++ .|+.+ ..++.|.+||+. .++. ...+. +. ..+..+++++ +++++++...++.|.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIE 250 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCCEEE
Confidence 345788899 988 55444 567899999986 4442 12222 22 5688999999 899888888889999
Q ss_pred EEeCCCCeEE-EecCCCCceEEEEEccCCCEEEEE-eCCCcEEEEeCCC
Q 009614 455 IWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIKD 501 (531)
Q Consensus 455 Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~sg-s~dg~I~iwd~~~ 501 (531)
+||..+++.+ .+..+...+.+++|+|+|+.|+++ ..++.|..|++..
T Consensus 251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999866543 344445789999999999955554 4567899999875
No 209
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=2.6e-08 Score=99.45 Aligned_cols=209 Identities=11% Similarity=0.092 Sum_probs=130.0
Q ss_pred cccceeeeCCCCeEEeee--cCCeEEEEeCCCCcccccccccc-eEEcccCCCEEEEEEccCCCEEEEEeC-----CCcE
Q 009614 237 RHGSATLKPGDHELTLGQ--RMRRVRVHPVKKQSRELSSLYTG-QEFLAHEGSILTMKFSLDGQYLASGGE-----DGTV 308 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs--~dg~I~vwd~~~~~~~~~~~~~~-~~l~~H~~~I~~l~fspdg~~Lasgs~-----Dg~I 308 (531)
....++++|+|+++++.. .++.++||.+..+. +..+... ....+|-..+.+|+++++|+++++-.. ++.|
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~--~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG--LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE--EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCC--eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 455689999999988854 23435555554221 1111000 112346678999999999876665433 5789
Q ss_pred EEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC
Q 009614 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (531)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (531)
.+||+.+++.+..+..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~--------------------------------------------------------~~~~~ 119 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPP--------------------------------------------------------ITLSN 119 (343)
T ss_dssp EEEETTTTEEEEEEECCTT--------------------------------------------------------TSCTT
T ss_pred EEEECCCCeEEEEEECChh--------------------------------------------------------hcccc
Confidence 9999988765443322110 00123
Q ss_pred CCeeEEEEcCC-C-eEEEEe---CCCcEEEEECCCCeEEEEeec------------------------------CCceEE
Q 009614 389 SEVLDLSWSKN-G-FLLSSS---ADKTVRLWQVGIDRCLRVFSH------------------------------NNYVTS 433 (531)
Q Consensus 389 ~~I~~l~~sp~-~-~l~s~s---~Dg~V~lwdl~~~~~l~~~~h------------------------------~~~V~s 433 (531)
..+..++++++ + .+++.. .++.|.+||+.+++..+.+.. ...+..
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 34577888865 4 344444 577888888887766554421 023688
Q ss_pred EEEeeCCCCEEEEEeCCC-eEEEEeCC---CCe-----E---EEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 434 VAFNPVDDNYFISGSIDG-KVRIWEVR---RCQ-----V---VDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 434 v~fsp~d~~~l~sgs~Dg-~I~Iwd~~---~~~-----~---~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
|+|+| +++.|+.+..++ .|..++.. .+. + +...++......+++.++|.++++...++.|.+||..+
T Consensus 200 ia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~ 278 (343)
T 2qe8_A 200 IVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD 278 (343)
T ss_dssp EEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT
T ss_pred eEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC
Confidence 99999 888888877665 45544431 111 0 11112333556799999999999988899999999966
Q ss_pred CeE
Q 009614 502 NQL 504 (531)
Q Consensus 502 ~~l 504 (531)
+++
T Consensus 279 G~~ 281 (343)
T 2qe8_A 279 RAY 281 (343)
T ss_dssp TEE
T ss_pred CCE
Confidence 764
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.93 E-value=1.2e-07 Score=92.93 Aligned_cols=234 Identities=9% Similarity=-0.042 Sum_probs=136.1
Q ss_pred cceeeeCCCC-eEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc
Q 009614 239 GSATLKPGDH-ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (531)
Q Consensus 239 ~s~~fspdg~-~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~ 317 (531)
....|+|+|+ +++++..++.|..|+... .. ..+..+...+..++++++|+++++...++.|.+|+.. ++
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~~--------~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWREDG-TV--------DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETTS-CE--------EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeCCC-CE--------EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 3478999998 667777889999998742 21 1344466779999999999977666566889999875 43
Q ss_pred cccceecC-C----CCCeeEEEeecCCcceeeeeccccccc---cccccccCCCceEEEeCCccccccCcceeEeecCCC
Q 009614 318 RLDGFDVQ-D----TDPSCLYFTINHLSQLIPIDVDKEKID---KTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (531)
Q Consensus 318 ~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (531)
. ..+... . ..+..+.+.+ .+.+...+....... ............++.++.....+ ..+. +..
T Consensus 118 ~-~~~~~~~~~~~~~~~~~i~~d~--dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-----~~~~-~~~ 188 (305)
T 3dr2_A 118 A-HLLVGRYAGKRLNSPNDLIVAR--DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-----QRMA-DLD 188 (305)
T ss_dssp E-EEEECEETTEECSCCCCEEECT--TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-----EEEE-EES
T ss_pred E-EEEEeccCCCccCCCCCEEECC--CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-----EEEe-cCC
Confidence 2 111110 0 1122233222 222222111000000 00000011224566666533221 1122 334
Q ss_pred CeeEEEEcCCC-eEEEEeCC------CcEEEEECCCCeEE--EEee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeC
Q 009614 390 EVLDLSWSKNG-FLLSSSAD------KTVRLWQVGIDRCL--RVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEV 458 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~D------g~V~lwdl~~~~~l--~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~ 458 (531)
....++|+|++ .|+.+... +.|.+|++..+... ..+. .......+++++ ++++.++. .+ .|.+|+.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~~-~~-gv~~~~~ 265 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSSS-GT-GVCVFDS 265 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEECC-SS-EEEEECT
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEec-CC-cEEEECC
Confidence 56789999999 67666554 78999998765411 1221 234456789998 88855544 44 5999999
Q ss_pred CCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEE
Q 009614 459 RRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCR 495 (531)
Q Consensus 459 ~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~ 495 (531)
.......+... ..+..++|.|+++.|++++.++..+
T Consensus 266 ~g~~~~~~~~~-~~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 266 DGQLLGHIPTP-GTASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp TSCEEEEEECS-SCCCEEEECTTSCEEEEEETTEEEE
T ss_pred CCCEEEEEECC-CceeEEEEeCCCCEEEEEcCCeEEE
Confidence 54433334333 3688999999999898888765333
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.93 E-value=5.9e-08 Score=106.52 Aligned_cols=197 Identities=10% Similarity=0.090 Sum_probs=124.7
Q ss_pred ccceeeeCCCCeEEe-----eecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCc-----
Q 009614 238 HGSATLKPGDHELTL-----GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT----- 307 (531)
Q Consensus 238 ~~s~~fspdg~~las-----gs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~----- 307 (531)
+..++|+|||++||- |+....|++||+.++..... .+.+. ....++|+ ||+.|+.+..+..
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~------~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET------PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE------EEEEE--ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc------ccCCc--eeccEEEe-CCCEEEEEEecCcccccc
Confidence 445689999999984 44456899999987653110 11111 12567899 9999999887743
Q ss_pred --------EEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 308 --------VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 308 --------I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
|++|++.+..... .
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~----------------------------------------------------------~ 223 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDD----------------------------------------------------------R 223 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGC----------------------------------------------------------E
T ss_pred cccCCCcEEEEEECCCCcccc----------------------------------------------------------e
Confidence 6666655433110 0
Q ss_pred ceeEeec-CCCCeeEEEEcCCC-eE-EEEeC---CCcEEEEECCCC--eEEEEeecCCceEEEEEeeCCCCEEEEEeCC-
Q 009614 380 PLHEFQG-HSSEVLDLSWSKNG-FL-LSSSA---DKTVRLWQVGID--RCLRVFSHNNYVTSVAFNPVDDNYFISGSID- 450 (531)
Q Consensus 380 ~~~~~~~-h~~~I~~l~~sp~~-~l-~s~s~---Dg~V~lwdl~~~--~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~D- 450 (531)
.+..... |...+..+.|+|+| +| ++.+. ...|.++|+.++ .......+....... |++.++.+++....+
T Consensus 224 ~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~ 302 (693)
T 3iuj_A 224 LVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDA 302 (693)
T ss_dssp EEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTC
T ss_pred EEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCC
Confidence 1122223 44557789999999 44 44432 358999999876 334444455555555 566244444454443
Q ss_pred --CeEEEEeCCCCeE---EEecCCCCceEEEEEccCCCEEEEEeCCC---cEEEEeCCCCeE
Q 009614 451 --GKVRIWEVRRCQV---VDYTDIREIVSAVCYCPDGKGGIVGTMTG---NCRFYDIKDNQL 504 (531)
Q Consensus 451 --g~I~Iwd~~~~~~---~~~~~~~~~v~~v~~spdg~~l~sgs~dg---~I~iwd~~~~~l 504 (531)
+.|.++|+.++.. ..+..+...+. .|+++++.|+....++ .|++|++.++..
T Consensus 303 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~ 362 (693)
T 3iuj_A 303 PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV 362 (693)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE
T ss_pred CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee
Confidence 6899999988654 34555655555 8999999888776544 689999986543
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.92 E-value=9.7e-07 Score=85.12 Aligned_cols=229 Identities=5% Similarity=0.005 Sum_probs=141.1
Q ss_pred ccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc
Q 009614 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~ 317 (531)
+..+++.++|.+.++...++.|..++.. .... . ..+......+.++++.++|+++++...++.|..|+.. ++
T Consensus 64 ~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~--~----~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 64 VMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT--E----YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--E----EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred ceeEEECCCCCEEEEecCCCeEEEECCC-CCeE--E----ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC
Confidence 3457888999888877778899999876 2221 0 0122234678999999999988877778899999986 44
Q ss_pred cccceecC--CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEE
Q 009614 318 RLDGFDVQ--DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (531)
Q Consensus 318 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~ 395 (531)
.. .+... ...+..+.+. ....+... ......+..++.. .... ......+...+..++
T Consensus 136 ~~-~~~~~~~~~~~~~i~~d--~~g~l~v~--------------~~~~~~i~~~~~~-g~~~---~~~~~~~~~~~~~i~ 194 (300)
T 2qc5_A 136 IY-EYDLPNKGSYPAFITLG--SDNALWFT--------------ENQNNSIGRITNT-GKLE---EYPLPTNAAAPVGIT 194 (300)
T ss_dssp EE-EEECSSTTCCEEEEEEC--TTSSEEEE--------------ETTTTEEEEECTT-CCEE---EEECSSTTCCEEEEE
T ss_pred EE-EccCCCCCCCceeEEEC--CCCCEEEE--------------ecCCCeEEEECCC-CcEE---EeeCCCCCCCcceEE
Confidence 32 22211 1122222222 21222221 1223344455441 1110 011223445788999
Q ss_pred EcCCC-eEEEEeCCCcEEEEECCCCeEEEE-ee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe--cCCC
Q 009614 396 WSKNG-FLLSSSADKTVRLWQVGIDRCLRV-FS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDIR 470 (531)
Q Consensus 396 ~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~-~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~--~~~~ 470 (531)
+.+++ ++++....+.|.+||. +++.... .. +...+.+|++++ +++++++...++.|..||. +++...+ ....
T Consensus 195 ~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 271 (300)
T 2qc5_A 195 SGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRITN-DNTIQEYQLQTEN 271 (300)
T ss_dssp ECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT-TSCEEEEECCSTT
T ss_pred ECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECC-CCCEEEeccCCCeEEEECC-CCcEEEEECCccC
Confidence 99988 4445455678999998 5544433 22 456789999999 8887777767799999998 4554433 3334
Q ss_pred CceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 471 ~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
..+.++++.++|+++++.. . .|..+|.+
T Consensus 272 ~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 272 AEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred CccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 5688999999998655544 4 67777653
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.88 E-value=2.8e-10 Score=115.18 Aligned_cols=189 Identities=11% Similarity=0.095 Sum_probs=102.9
Q ss_pred CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecC
Q 009614 246 GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQ 325 (531)
Q Consensus 246 dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~ 325 (531)
++..+++++.||.|+.||..+++.... +.. +.+.+..+..++..+++++.||.|+.||..+++.+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~-------~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWT-------LKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEE-------EEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEE-------ecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 577889999999999999887665432 222 34545555667878888889999999999887653322110
Q ss_pred CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEE
Q 009614 326 DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSS 405 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~ 405 (531)
.. ... ...++ +..++.++++
T Consensus 79 ~~---------------------------------------------------~~~-----~~sp~----~~~~~~v~~g 98 (369)
T 2hz6_A 79 IP---------------------------------------------------ELV-----QASPC----RSSDGILYMG 98 (369)
T ss_dssp HH---------------------------------------------------HHH-----TTCSC----C-----CCCC
T ss_pred Cc---------------------------------------------------ccc-----ccCce----EecCCEEEEE
Confidence 00 000 00111 1123467778
Q ss_pred eCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCC--
Q 009614 406 SADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDG-- 482 (531)
Q Consensus 406 s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg-- 482 (531)
+.|+.|+.||..+++.+..+.... .+.++| ++..+++++.|+.|+.||..+++.+ ..... .....++.++.
T Consensus 99 ~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~~~~~~~~~~~~~ 172 (369)
T 2hz6_A 99 KKQDIWYVIDLLTGEKQQTLSSAF---ADSLSP-STSLLYLGRTEYTITMYDTKTRELRWNATYF--DYAASLPEDDVDY 172 (369)
T ss_dssp EEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE--EECCBCCCCCTTC
T ss_pred eCCCEEEEEECCCCcEEEEecCCC---cccccc-cCCEEEEEecCCEEEEEECCCCCEEEeEecc--cccCccccCCccc
Confidence 889999999999999988776433 245677 7888999999999999999998764 21111 11222333332
Q ss_pred -CEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 483 -KGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 483 -~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
..+++++.+|.|+.||..+|+++.+.+
T Consensus 173 ~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 173 KMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred cceEEEECCCCEEEEEECCCCcEEEEec
Confidence 567788899999999999999887665
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.87 E-value=1.9e-07 Score=103.29 Aligned_cols=199 Identities=14% Similarity=0.062 Sum_probs=126.0
Q ss_pred cceeeeCCCCeEEeeecCCe--------------EEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeC
Q 009614 239 GSATLKPGDHELTLGQRMRR--------------VRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (531)
Q Consensus 239 ~s~~fspdg~~lasgs~dg~--------------I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~ 304 (531)
..++|+|| +.|+.+..++. |++|++.+...... .......|...+..+.|+|||++|+..+.
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~---lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQ---PVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCE---EEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCE---EEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 56899999 98888776543 88999875442211 01011233446899999999999988775
Q ss_pred CC-----cEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 305 DG-----TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 305 Dg-----~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
++ .|.+||+.++...
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~------------------------------------------------------------ 307 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIG------------------------------------------------------------ 307 (741)
T ss_dssp CTTCSCCEEEEEEEETTEEC------------------------------------------------------------
T ss_pred ccCCCcceEEEEECCCCCCc------------------------------------------------------------
Confidence 54 7888887654210
Q ss_pred ceeEeecCCCCeeEEEEcCCC-eEEEEeC----CCcEEEEECCCC--eEEEEee-cCCceEEEEEeeCCCCEEEEEeCCC
Q 009614 380 PLHEFQGHSSEVLDLSWSKNG-FLLSSSA----DKTVRLWQVGID--RCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDG 451 (531)
Q Consensus 380 ~~~~~~~h~~~I~~l~~sp~~-~l~s~s~----Dg~V~lwdl~~~--~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg 451 (531)
....+..+...+.... .|+| .|+..+. .+.|.+||+.++ .....+. +...+..+.+. ++.++++...|+
T Consensus 308 ~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg 384 (741)
T 1yr2_A 308 PVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDA 384 (741)
T ss_dssp CCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETT
T ss_pred ccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECC
Confidence 0011112222333332 3666 6666655 345999999874 4444444 44456677776 467888888899
Q ss_pred eEEEEeCC-CCeEE-EecC-CCCceEEEEEccCCCEEEEEe----CCCcEEEEeCCCCeE
Q 009614 452 KVRIWEVR-RCQVV-DYTD-IREIVSAVCYCPDGKGGIVGT----MTGNCRFYDIKDNQL 504 (531)
Q Consensus 452 ~I~Iwd~~-~~~~~-~~~~-~~~~v~~v~~spdg~~l~sgs----~dg~I~iwd~~~~~l 504 (531)
..+||.+. +++.. .+.. ....+..+.++|+++.|+... ..++|++||+.+++.
T Consensus 385 ~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 385 KSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 87777554 34333 3332 356788999999998666432 247899999998874
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.86 E-value=5.8e-07 Score=91.98 Aligned_cols=203 Identities=14% Similarity=0.044 Sum_probs=125.7
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCc
Q 009614 285 GSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (531)
Q Consensus 285 ~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (531)
.....|+|+++|+++++...++.|++||..++........ ..... +.+.+... .++..... ...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~-~l~~~d~~-------------~~~ 194 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQ-RVYSIGWE-------------GTH 194 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSS-EEEEEBSS-------------TTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCC-cEEEEecC-------------CCc
Confidence 4678999999999878777789999999987765433322 11122 33332221 11111111 111
Q ss_pred eEEEeCCccccccCcceeEeec-CCCCeeEEEEcC-CCeEEEEeCCCcEEEEECCCCeEEEE----ee-cCCce--EEEE
Q 009614 365 TCVVLPPKVFRLLEKPLHEFQG-HSSEVLDLSWSK-NGFLLSSSADKTVRLWQVGIDRCLRV----FS-HNNYV--TSVA 435 (531)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~-h~~~I~~l~~sp-~~~l~s~s~Dg~V~lwdl~~~~~l~~----~~-h~~~V--~sv~ 435 (531)
.++.++....... ..+..+.. +...+.+++++| ++.|+.+..++.|+.||..++..... .. +...- ..++
T Consensus 195 ~I~~~d~~~~~~~-~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia 273 (409)
T 3hrp_A 195 TVYVYMKASGWAP-TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLI 273 (409)
T ss_dssp EEEEEEGGGTTCE-EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEE
T ss_pred eEEEEEcCCCcee-EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEE
Confidence 3444433211100 00111112 445678999999 56666677788999999987764332 11 11111 3899
Q ss_pred EeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCC---------------CceEEEEEccCCCEEEEEe-CCCcEEEEeC
Q 009614 436 FNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIR---------------EIVSAVCYCPDGKGGIVGT-MTGNCRFYDI 499 (531)
Q Consensus 436 fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~---------------~~v~~v~~spdg~~l~sgs-~dg~I~iwd~ 499 (531)
|+|.++.++++...++.|+.|+.... ...+.++. .....++++|+|+++++-. .++.|+.|++
T Consensus 274 ~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 274 YYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred EeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 99944666777777899999998754 33333221 3578999999999777777 7899999998
Q ss_pred CCCeEE
Q 009614 500 KDNQLY 505 (531)
Q Consensus 500 ~~~~l~ 505 (531)
.++++.
T Consensus 353 ~~G~v~ 358 (409)
T 3hrp_A 353 LDGYVS 358 (409)
T ss_dssp TTTEEE
T ss_pred CCCEEE
Confidence 888754
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.85 E-value=3.2e-06 Score=85.31 Aligned_cols=234 Identities=9% Similarity=-0.084 Sum_probs=139.8
Q ss_pred eeCCCCeEEeeec--CC---eEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEe----------CCCc
Q 009614 243 LKPGDHELTLGQR--MR---RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------EDGT 307 (531)
Q Consensus 243 fspdg~~lasgs~--dg---~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs----------~Dg~ 307 (531)
..|+++++.+... .. .|.++|..+... ...+.....+ .++++|||++|+.+. .++.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~-------~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSI-------LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeE-------EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCe
Confidence 3467766655442 22 889999875442 1234433344 899999999998886 3678
Q ss_pred EEEEEcccCccccceecC-------CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcc
Q 009614 308 VRVWKVIEHERLDGFDVQ-------DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (531)
Q Consensus 308 I~iWd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (531)
|.+||..+.+.+..+... ...+..+.+.++....++. .. .....+.+++ ....+
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~-n~-------------~~~~~v~viD-~t~~~---- 159 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFF-QF-------------AAGPAVGLVV-QGGSS---- 159 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEE-ec-------------CCCCeEEEEE-CCCCE----
Confidence 999999988877766543 1223344444443322221 10 1123455555 44322
Q ss_pred eeE-eecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEee------cCCc-eEEEEEeeCCCCEEEEEeCC
Q 009614 381 LHE-FQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS------HNNY-VTSVAFNPVDDNYFISGSID 450 (531)
Q Consensus 381 ~~~-~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~------h~~~-V~sv~fsp~d~~~l~sgs~D 450 (531)
+.. +.. .+ ++.+.|.+ .+++.+.||.+.++|. +++.+.... ...+ .....+.+ ++..++..+..
T Consensus 160 ~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~ 233 (373)
T 2mad_H 160 DDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN-KSGRIVWPVYS 233 (373)
T ss_pred EeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe-cCCEEEEEcCC
Confidence 222 221 11 24445555 6677888999999999 877663321 1122 13356677 44444444478
Q ss_pred CeEEEEeCCCCe--EEE-ecC----------CCCceEEEEEccCCCEEEEEeC----------CCcEEEEeCCCCeEEEE
Q 009614 451 GKVRIWEVRRCQ--VVD-YTD----------IREIVSAVCYCPDGKGGIVGTM----------TGNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 451 g~I~Iwd~~~~~--~~~-~~~----------~~~~v~~v~~spdg~~l~sgs~----------dg~I~iwd~~~~~l~~~ 507 (531)
+.|.+.|+.+.. ++. +.- .......++++||++.++++.. .+.|.++|+.+++.+.+
T Consensus 234 ~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~ 313 (373)
T 2mad_H 234 GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQ 313 (373)
T ss_pred ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEE
Confidence 899999997653 222 110 1122445789999998887653 35799999999999887
Q ss_pred eee
Q 009614 508 NQI 510 (531)
Q Consensus 508 ~~~ 510 (531)
+.+
T Consensus 314 i~~ 316 (373)
T 2mad_H 314 ISL 316 (373)
T ss_pred EEC
Confidence 754
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.83 E-value=2.5e-07 Score=92.97 Aligned_cols=238 Identities=9% Similarity=-0.060 Sum_probs=137.9
Q ss_pred eEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEe----------CCCcEEEEEcccCccccceecC--
Q 009614 258 RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------EDGTVRVWKVIEHERLDGFDVQ-- 325 (531)
Q Consensus 258 ~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs----------~Dg~I~iWd~~~~~~~~~~~~~-- 325 (531)
+|.+.|..+.+. ...+.....+ .+.++|||++|+++. .++.|.+||+.+++.+..+...
T Consensus 47 ~vsvID~~t~~v-------~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVT-------LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEE-------EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECCCCeE-------EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence 888999875443 2234333345 799999999998886 3789999999999998888754
Q ss_pred -----CCCCeeEEEeecCCcceeeeecccccccc---------c---------------cccccCCCceEEEeCCcc---
Q 009614 326 -----DTDPSCLYFTINHLSQLIPIDVDKEKIDK---------T---------------KSLRKSSDLTCVVLPPKV--- 373 (531)
Q Consensus 326 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---------------~~~~~~~~~~~~~~~~~~--- 373 (531)
...+..+.++++....+++.......... . ..+..+.++.+...+...
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 13455666665554333221110000000 0 001112222222222221
Q ss_pred --ccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCe--EEEEeec-----------CCceEEEEEe
Q 009614 374 --FRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDR--CLRVFSH-----------NNYVTSVAFN 437 (531)
Q Consensus 374 --~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~--~l~~~~h-----------~~~V~sv~fs 437 (531)
..........+.-...+. . .+++ .++..+. +.|.+.|+.+.. .+..+.. ......++++
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred cCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc
Confidence 000000000000111222 2 4444 5555555 899999986532 3332211 1112227899
Q ss_pred eCCCCEEEEEeC---------CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCE-EEEEe-CCCcEEEEeCCCCeEEE
Q 009614 438 PVDDNYFISGSI---------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKG-GIVGT-MTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 438 p~d~~~l~sgs~---------Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~-l~sgs-~dg~I~iwd~~~~~l~~ 506 (531)
| +++.++.+.. ++.+.++|+.+.+++...........++|+|||++ +++.. .++.|.++|+.+++.+.
T Consensus 273 ~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 273 K-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp T-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred C-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 9 7777765432 23567999999998865545557899999999985 55555 48999999999999998
Q ss_pred Eeee
Q 009614 507 QNQI 510 (531)
Q Consensus 507 ~~~~ 510 (531)
+++.
T Consensus 352 ~I~v 355 (368)
T 1mda_H 352 SVEL 355 (368)
T ss_dssp ECCC
T ss_pred EEEC
Confidence 7764
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.80 E-value=5.8e-07 Score=87.57 Aligned_cols=100 Identities=10% Similarity=0.136 Sum_probs=75.7
Q ss_pred CeeEEEEcCCC-eE-EEEeCCCcEEEEEC--CCCeEE--EEe---e-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCC
Q 009614 390 EVLDLSWSKNG-FL-LSSSADKTVRLWQV--GIDRCL--RVF---S-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (531)
Q Consensus 390 ~I~~l~~sp~~-~l-~s~s~Dg~V~lwdl--~~~~~l--~~~---~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~ 459 (531)
..+.++|+|++ .| ++.+.++.|.+|++ .++... +.+ . +...+..+++++ ++++.++....+.|.+||..
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTT
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCC
Confidence 45789999998 44 56667889999997 455432 222 1 346788999999 88888888888899999999
Q ss_pred CCeEEE-ecCCCCceEEEEEc-cCCCEEEEEeC
Q 009614 460 RCQVVD-YTDIREIVSAVCYC-PDGKGGIVGTM 490 (531)
Q Consensus 460 ~~~~~~-~~~~~~~v~~v~~s-pdg~~l~sgs~ 490 (531)
+++++. +..+...+++++|. ||++.|++++.
T Consensus 229 tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 229 TGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 888775 44445689999998 89887766654
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.75 E-value=1.3e-06 Score=87.88 Aligned_cols=239 Identities=10% Similarity=0.002 Sum_probs=147.7
Q ss_pred eeeeCCCCeEEeeec-----CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEe----------CC
Q 009614 241 ATLKPGDHELTLGQR-----MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------ED 305 (531)
Q Consensus 241 ~~fspdg~~lasgs~-----dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs----------~D 305 (531)
....|+++.+.+... ++.|.+.|..+... ...+.....+ . ++++|||++|+.+. .+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v-------~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV-------IGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE-------EEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE-------EEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 466799998877654 68999999875442 2334433444 3 99999999887775 36
Q ss_pred CcEEEEEcccCccccceecCC-------CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 306 GTVRVWKVIEHERLDGFDVQD-------TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
+.|.+||..+++.+..+.... ..+..+.+.++.....+. . ...+..+.+++......
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVa-n-------------~~~~~~VsVID~~t~~v-- 172 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFY-Q-------------FSPAPAVGVVDLEGKAF-- 172 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEE-E-------------CSSSCEEEEEETTTTEE--
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEE-E-------------cCCCCeEEEEECCCCcE--
Confidence 789999999999888776543 134445555544322211 1 11234566666655433
Q ss_pred cceeEeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCC-CeEEEEee-c----CCceE-EEEEeeCCCCEEEEEeC
Q 009614 379 KPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGI-DRCLRVFS-H----NNYVT-SVAFNPVDDNYFISGSI 449 (531)
Q Consensus 379 ~~~~~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~-~~~l~~~~-h----~~~V~-sv~fsp~d~~~l~sgs~ 449 (531)
+.++.... +..+.|.+ .+++.+.||.+.+.++.+ ++...... + ..++. ...|.+.++++++ .+.
T Consensus 173 --v~tI~v~g----~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~ 245 (386)
T 3sjl_D 173 --KRMLDVPD----CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTY 245 (386)
T ss_dssp --EEEEECCS----EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBT
T ss_pred --EEEEECCC----cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeC
Confidence 23332111 11223544 677888899999999976 55432211 1 12221 2466532665544 566
Q ss_pred CCeEEEEeCCCCeE--EE-ec--C--------CCCceEEEEEccCCCEEEEEeC----------CCcEEEEeCCCCeEEE
Q 009614 450 DGKVRIWEVRRCQV--VD-YT--D--------IREIVSAVCYCPDGKGGIVGTM----------TGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 450 Dg~I~Iwd~~~~~~--~~-~~--~--------~~~~v~~v~~spdg~~l~sgs~----------dg~I~iwd~~~~~l~~ 506 (531)
+|.|++.|+.+... +. +. . .......++++|+++.+++... .+.|.++|+.+++.+.
T Consensus 246 ~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~ 325 (386)
T 3sjl_D 246 TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA 325 (386)
T ss_dssp TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEE
Confidence 89999999987642 21 21 0 1123345778999998888653 2469999999999998
Q ss_pred Eeeee
Q 009614 507 QNQIC 511 (531)
Q Consensus 507 ~~~~~ 511 (531)
++.+.
T Consensus 326 ~i~vg 330 (386)
T 3sjl_D 326 KFEMG 330 (386)
T ss_dssp EEEEE
T ss_pred EEECC
Confidence 87754
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.74 E-value=2.4e-06 Score=84.38 Aligned_cols=184 Identities=8% Similarity=0.047 Sum_probs=115.3
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEc-c-cCCCEEEEEEccCCCEEEEEeCC----CcEEE
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL-A-HEGSILTMKFSLDGQYLASGGED----GTVRV 310 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~-~-H~~~I~~l~fspdg~~Lasgs~D----g~I~i 310 (531)
.+.+++++|+|.++++. . ..|.+|+..++.... +. ... + ....+++++++|+|+++++...+ +...|
T Consensus 91 ~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~--~~---~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTL--HA---ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSI 163 (326)
T ss_dssp CEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEE--EE---CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEE
T ss_pred cceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEE--Ee---eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEE
Confidence 45567899999877764 3 448999976544211 00 000 1 12358899999999976654322 22344
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
|.+.+++. ..+..+...
T Consensus 164 ~~~~~g~~---------------------------------------------------------------~~~~~~~~~ 180 (326)
T 2ghs_A 164 YHVAKGKV---------------------------------------------------------------TKLFADISI 180 (326)
T ss_dssp EEEETTEE---------------------------------------------------------------EEEEEEESS
T ss_pred EEEeCCcE---------------------------------------------------------------EEeeCCCcc
Confidence 43322110 000011223
Q ss_pred eeEEEEcCCC-eE-EEEeCCCcEEEEECC--CC-e-----EEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCC
Q 009614 391 VLDLSWSKNG-FL-LSSSADKTVRLWQVG--ID-R-----CLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (531)
Q Consensus 391 I~~l~~sp~~-~l-~s~s~Dg~V~lwdl~--~~-~-----~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~ 459 (531)
...++|+|++ .| ++.+.++.|.+||+. ++ . .+..+. ....+..+++++ +++++++...++.|.+||..
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECTT
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECCC
Confidence 5689999998 55 444567899999986 55 3 122222 345678899998 88888877777899999994
Q ss_pred CCeEE-EecCCCCceEEEEEc-cCCCEEEEEeCCC
Q 009614 460 RCQVV-DYTDIREIVSAVCYC-PDGKGGIVGTMTG 492 (531)
Q Consensus 460 ~~~~~-~~~~~~~~v~~v~~s-pdg~~l~sgs~dg 492 (531)
++.+ .+..+...+++++|. |++..|++++..+
T Consensus 260 -g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 -GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 5544 444455679999998 8988776665443
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.72 E-value=1.1e-06 Score=85.90 Aligned_cols=157 Identities=8% Similarity=0.020 Sum_probs=109.4
Q ss_pred EcccCCCEEEEEEccCCC-EEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeecccccccccccc
Q 009614 280 FLAHEGSILTMKFSLDGQ-YLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSL 358 (531)
Q Consensus 280 l~~H~~~I~~l~fspdg~-~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (531)
+..+........|+|+|+ ++++...++.|..|+. +++.
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---------------------------------------- 78 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---------------------------------------- 78 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE----------------------------------------
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE----------------------------------------
Confidence 444455678899999998 5677777889999986 3321
Q ss_pred ccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEe-CCCcEEEEECCCCeEEEEee-----cCCceE
Q 009614 359 RKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSS-ADKTVRLWQVGIDRCLRVFS-----HNNYVT 432 (531)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s-~Dg~V~lwdl~~~~~l~~~~-----h~~~V~ 432 (531)
..+..+...+..++++++|.|+.+. .++.|.+|+.. ++...... ....+.
T Consensus 79 -----------------------~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~ 134 (305)
T 3dr2_A 79 -----------------------DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPN 134 (305)
T ss_dssp -----------------------EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCC
T ss_pred -----------------------EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCC
Confidence 1112234567889999999544444 55789999986 55433222 123467
Q ss_pred EEEEeeCCCCEEEE----EeC-------------CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCC----
Q 009614 433 SVAFNPVDDNYFIS----GSI-------------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMT---- 491 (531)
Q Consensus 433 sv~fsp~d~~~l~s----gs~-------------Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~d---- 491 (531)
.++++| +++++++ |.. .+.|..||..++++..+. .......++|+||++.|+++...
T Consensus 135 ~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 135 DLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp CEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---
T ss_pred CEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCC
Confidence 899999 8998886 332 256888888777655444 44567889999999988877665
Q ss_pred --CcEEEEeCCCCe
Q 009614 492 --GNCRFYDIKDNQ 503 (531)
Q Consensus 492 --g~I~iwd~~~~~ 503 (531)
+.|++|++..+.
T Consensus 213 ~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 213 GSVEITAFAWRDGA 226 (305)
T ss_dssp CCCEEEEEEEETTE
T ss_pred CCCEEEEEEecCCC
Confidence 689999998665
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.70 E-value=1.5e-06 Score=95.18 Aligned_cols=199 Identities=12% Similarity=0.139 Sum_probs=126.9
Q ss_pred ccceeeeCCCCeEEeeecCC-------------eEEEEeCCCCcccccccccceEEcc-cCCCEEEEEEccCCCEEEEEe
Q 009614 238 HGSATLKPGDHELTLGQRMR-------------RVRVHPVKKQSRELSSLYTGQEFLA-HEGSILTMKFSLDGQYLASGG 303 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg-------------~I~vwd~~~~~~~~~~~~~~~~l~~-H~~~I~~l~fspdg~~Lasgs 303 (531)
...++|+ ||+.|+.++.+. .|++|++.+...+...+ ..... |...+..+.|+|||++|+...
T Consensus 177 ~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v---~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 177 FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLV---FGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEE---ESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEE---EecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 3568999 999998887764 49999987654321111 11123 455678999999999885543
Q ss_pred C----CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCc
Q 009614 304 E----DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (531)
Q Consensus 304 ~----Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (531)
. +..|.+||+.++..
T Consensus 253 ~~~~~~~~i~~~d~~~~~~------------------------------------------------------------- 271 (693)
T 3iuj_A 253 ANSTSGNRLYVKDLSQENA------------------------------------------------------------- 271 (693)
T ss_dssp ESSSSCCEEEEEETTSTTC-------------------------------------------------------------
T ss_pred ccCCCCcEEEEEECCCCCC-------------------------------------------------------------
Confidence 2 24788888765421
Q ss_pred ceeEeecCCCCeeEEEEcCCC--eEEEEeCC---CcEEEEECCCCeE---EEEeecCCceEEEEEeeCCCCEEEEEeC-C
Q 009614 380 PLHEFQGHSSEVLDLSWSKNG--FLLSSSAD---KTVRLWQVGIDRC---LRVFSHNNYVTSVAFNPVDDNYFISGSI-D 450 (531)
Q Consensus 380 ~~~~~~~h~~~I~~l~~sp~~--~l~s~s~D---g~V~lwdl~~~~~---l~~~~h~~~V~sv~fsp~d~~~l~sgs~-D 450 (531)
....+..+....... |++++ +++.+..+ +.|..+|+.++.. .....|...+. .|+| ++++|+.... +
T Consensus 272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~-~g~~lv~~~~~~ 347 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS-GSGYLFAEYMVD 347 (693)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE-ETTEEEEEEEET
T ss_pred ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE-ECCEEEEEEEEC
Confidence 011122233333333 44554 34444333 6799999987654 33344655555 8899 7777766654 4
Q ss_pred C--eEEEEeCCCCeEEEec-CCCCceEEEEEccCCCEEEEEeCC----CcEEEEeCCCCeEE
Q 009614 451 G--KVRIWEVRRCQVVDYT-DIREIVSAVCYCPDGKGGIVGTMT----GNCRFYDIKDNQLY 505 (531)
Q Consensus 451 g--~I~Iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~sgs~d----g~I~iwd~~~~~l~ 505 (531)
+ .|++|++..+....+. .....+..+.++|++..|+....+ +.++.||+.+++..
T Consensus 348 g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 348 ATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp TEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred CeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 4 6899999876554433 334567788888998877766555 78999999887643
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.67 E-value=5e-06 Score=84.42 Aligned_cols=201 Identities=15% Similarity=0.206 Sum_probs=128.4
Q ss_pred CCCCeEE-eeecCCeEEEEeCCCCcccccccccceEEc------c-cCCCEEEEEEccCCCEEEEEeCC------CcEEE
Q 009614 245 PGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFL------A-HEGSILTMKFSLDGQYLASGGED------GTVRV 310 (531)
Q Consensus 245 pdg~~la-sgs~dg~I~vwd~~~~~~~~~~~~~~~~l~------~-H~~~I~~l~fspdg~~Lasgs~D------g~I~i 310 (531)
+++++|+ .|-.+++|.|.|+....... ...+++. . ....-..+...|+| +++++..+ |.|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p---~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREP---KIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSC---EEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCc---eeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 6777765 47788999999997443221 1222231 1 11234567888999 77776555 67888
Q ss_pred EEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC
Q 009614 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (531)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (531)
.|..+.+.+..+..... ...-
T Consensus 169 lD~~T~~v~~~~~~~~~-----------------------------------------------------------~~~~ 189 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRG-----------------------------------------------------------DQYL 189 (462)
T ss_dssp ECTTTCCEEEECCSBCT-----------------------------------------------------------TCCC
T ss_pred EECCCCeEEEEEccCCC-----------------------------------------------------------Cccc
Confidence 88877765544321110 0111
Q ss_pred eeEEEEcCCC-eEEEEe-------------------CCCcEEEEECCCCeEEEEeecC---CceEEEEE--eeCCCCEEE
Q 009614 391 VLDLSWSKNG-FLLSSS-------------------ADKTVRLWQVGIDRCLRVFSHN---NYVTSVAF--NPVDDNYFI 445 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s-------------------~Dg~V~lwdl~~~~~l~~~~h~---~~V~sv~f--sp~d~~~l~ 445 (531)
-.++-|+|++ .++++. ...+|.+||+.+++.+.++.-. .....|.| +| ++++++
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aY 268 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP-TKLMGF 268 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST-TCCEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC-CCCEEE
Confidence 2356677877 666653 3789999999999888888643 23455656 99 888777
Q ss_pred EEe------CCCeEEEEeCCCCe-----EEEecCC----------------CCceEEEEEccCCCEEEEEeC-CCcEEEE
Q 009614 446 SGS------IDGKVRIWEVRRCQ-----VVDYTDI----------------REIVSAVCYCPDGKGGIVGTM-TGNCRFY 497 (531)
Q Consensus 446 sgs------~Dg~I~Iwd~~~~~-----~~~~~~~----------------~~~v~~v~~spdg~~l~sgs~-dg~I~iw 497 (531)
+++ .+++|.+|....++ ++.+... ...+..|.++|||++|.++.. .+.|.+|
T Consensus 269 V~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavf 348 (462)
T 2ece_A 269 INMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQY 348 (462)
T ss_dssp EEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEE
T ss_pred EEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEE
Confidence 766 56788887665543 2211110 245788999999999988776 6789999
Q ss_pred eCCC---CeEEEEee
Q 009614 498 DIKD---NQLYQQNQ 509 (531)
Q Consensus 498 d~~~---~~l~~~~~ 509 (531)
|+.. .+++.++.
T Consensus 349 dV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 349 DISNPFKPVLTGKVK 363 (462)
T ss_dssp ECSSTTSCEEEEEEE
T ss_pred EecCCCCcEEEEEEE
Confidence 9863 34444443
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.66 E-value=4e-07 Score=91.48 Aligned_cols=228 Identities=7% Similarity=-0.065 Sum_probs=131.4
Q ss_pred ceeeeCCCCeEEeee----------cCCeEEEEeCCCCcccccccccceEEccc-------CCCEEEEEEccCCCEEEEE
Q 009614 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTGQEFLAH-------EGSILTMKFSLDGQYLASG 302 (531)
Q Consensus 240 s~~fspdg~~lasgs----------~dg~I~vwd~~~~~~~~~~~~~~~~l~~H-------~~~I~~l~fspdg~~Lasg 302 (531)
.+.++||++++.++. .++.|.+||..+.... .++..+ ......+.|+|||++|+++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv-------~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVa 141 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI-------ADIELPDAPRFSVGPRVHIIGNCASSACLLFF 141 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE-------EEEEETTSCSCCBSCCTTSEEECTTSSCEEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE-------EEEECCCccccccCCCcceEEEcCCCCEEEEE
Confidence 479999999998875 4789999999865432 233221 1235578999999999988
Q ss_pred eC--CCcEEE--EEcccCccccceecCCCC-C----eeEEEeecCCcceeeeeccc-----cccccc--ccc-------c
Q 009614 303 GE--DGTVRV--WKVIEHERLDGFDVQDTD-P----SCLYFTINHLSQLIPIDVDK-----EKIDKT--KSL-------R 359 (531)
Q Consensus 303 s~--Dg~I~i--Wd~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~-------~ 359 (531)
.. +..|.+ +|+.+ +..+...... . ...++.....+.+..+.... .+.... ..+ .
T Consensus 142 n~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~ 218 (368)
T 1mda_H 142 LFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ 218 (368)
T ss_dssp ECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEE
T ss_pred ccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccc
Confidence 74 467888 99877 3334322110 0 00111111222223333322 111000 000 0
Q ss_pred cCCC--------ceEEEeCCccccccCcceeEeec----------CCCCeeEEEEcCCC-eEEEEeC---------CCcE
Q 009614 360 KSSD--------LTCVVLPPKVFRLLEKPLHEFQG----------HSSEVLDLSWSKNG-FLLSSSA---------DKTV 411 (531)
Q Consensus 360 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~----------h~~~I~~l~~sp~~-~l~s~s~---------Dg~V 411 (531)
...+ +.+.+.+..... .+.+..+.- +......++++|++ +++.+.. +..+
T Consensus 219 ~~~~~~~~~vs~~~V~viD~~~~~--~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 219 ANYPGMLVWAVASSILQGDIPAAG--ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp ETTTTEEEECBSSCCEEEECCSSC--CEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred cccCCEEEEEcCCEEEEEECCCCc--ceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 0001 222222221100 000010100 01112236899998 5554432 2356
Q ss_pred EEEECCCCeEEEEeecCCceEEEEEeeCCCC-EEEEEe-CCCeEEEEeCCCCeEEEecCCCCceEEEEEcc
Q 009614 412 RLWQVGIDRCLRVFSHNNYVTSVAFNPVDDN-YFISGS-IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCP 480 (531)
Q Consensus 412 ~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~-~l~sgs-~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~sp 480 (531)
.++|+.+.+.+..+.-......|+|+| +++ ++++.. .++.|.++|+.+++++...........+++.+
T Consensus 297 ~ViD~~t~~vv~~i~vg~~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 297 SSVTASVGQTSGPISNGHDSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEEESSSCCEEECCEEEEEECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred EEEECCCCeEEEEEECCCCcceEEECC-CCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence 699999999999887556789999999 776 667777 59999999999999998776666667777664
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.61 E-value=2.6e-06 Score=87.03 Aligned_cols=235 Identities=8% Similarity=-0.026 Sum_probs=141.3
Q ss_pred CCCCeEEeeec-C----CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEe----------CCCcEE
Q 009614 245 PGDHELTLGQR-M----RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------EDGTVR 309 (531)
Q Consensus 245 pdg~~lasgs~-d----g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs----------~Dg~I~ 309 (531)
|++..+.+... + +.|.+.|..+.+.. ..+..-..+ .+.++|||++|+.+. .++.|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv-------~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs 152 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRIL-------GMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVE 152 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEE-------EEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEE-------EEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEE
Confidence 45555544433 2 79999998854432 234333345 899999999888876 467899
Q ss_pred EEEcccCccccceecC-------CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCccee
Q 009614 310 VWKVIEHERLDGFDVQ-------DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (531)
++|..+++.+..+... ...+..+.+.++.....+. . ......+.+++....++ +.
T Consensus 153 viD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~-n-------------~~~~~~VsVID~~t~kv----v~ 214 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFY-Q-------------FSPAPAVGVVDLEGKTF----DR 214 (426)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEE-E-------------CSSSCEEEEEETTTTEE----EE
T ss_pred EEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEE-e-------------cCCCCeEEEEECCCCeE----EE
Confidence 9999999888777653 1223344444443222211 0 01234455666555433 22
Q ss_pred EeecCCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEE----ee-cCCce-EEEEEeeCCCCEEEEEeCCCeEE
Q 009614 383 EFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRV----FS-HNNYV-TSVAFNPVDDNYFISGSIDGKVR 454 (531)
Q Consensus 383 ~~~~h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~----~~-h~~~V-~sv~fsp~d~~~l~sgs~Dg~I~ 454 (531)
.+.-. . +....|.+ .+++.+.||.+.+.++.+++.... +. ...++ ..+.|.| ++..++..+..+.|.
T Consensus 215 ~I~v~--g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~-dg~~~~~~s~~g~V~ 289 (426)
T 3c75_H 215 MLDVP--D--CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSL-RSGRLVWPTYTGKIF 289 (426)
T ss_dssp EEECC--S--EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECT-TTCEEEEEBTTSEEE
T ss_pred EEEcC--C--ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecC-CCCEEEEEeCCCcEE
Confidence 22211 1 12334443 666777888888888866655432 21 11111 2356788 777766667889999
Q ss_pred EEeCCCCeEEE---ecC----------CCCceEEEEEccCCCEEEEEeC----------CCcEEEEeCCCCeEEEEeeee
Q 009614 455 IWEVRRCQVVD---YTD----------IREIVSAVCYCPDGKGGIVGTM----------TGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 455 Iwd~~~~~~~~---~~~----------~~~~v~~v~~spdg~~l~sgs~----------dg~I~iwd~~~~~l~~~~~~~ 511 (531)
+.|+....... +.- .......++++|+++.+++... .+.|.++|+.+++.+.++.+.
T Consensus 290 ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg 369 (426)
T 3c75_H 290 QADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG 369 (426)
T ss_dssp EEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC
Confidence 99997665331 110 0111223789999988777643 357999999999999888754
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.53 E-value=0.00014 Score=69.27 Aligned_cols=235 Identities=8% Similarity=-0.037 Sum_probs=128.5
Q ss_pred CeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEE-eCCCcEEEEEcccCccccceecCC
Q 009614 248 HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASG-GEDGTVRVWKVIEHERLDGFDVQD 326 (531)
Q Consensus 248 ~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasg-s~Dg~I~iWd~~~~~~~~~~~~~~ 326 (531)
++|+.+.. +.|+.+++....... ......+......+.+++|++++..|+.+ ..++.|..+++........+....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~--~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKK--TEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCG--GGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCccccc--ccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 44555543 578888877543211 00001122223457899999976655544 457899999986554322221111
Q ss_pred CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEEEEcCC-CeEEE
Q 009614 327 TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSKN-GFLLS 404 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l~~sp~-~~l~s 404 (531)
..+..+.+.+.. ..++..+. ....+.+++... .....+ .........++++|+ +.|+.
T Consensus 79 ~~p~~ia~d~~~-~~lyv~d~--------------~~~~I~~~~~~g-----~~~~~~~~~~~~~P~~i~vd~~~g~lyv 138 (267)
T 1npe_A 79 GSPEGIALDHLG-RTIFWTDS--------------QLDRIEVAKMDG-----TQRRVLFDTGLVNPRGIVTDPVRGNLYW 138 (267)
T ss_dssp CCEEEEEEETTT-TEEEEEET--------------TTTEEEEEETTS-----CSCEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred CCccEEEEEecC-CeEEEEEC--------------CCCEEEEEEcCC-----CCEEEEEECCCCCccEEEEeeCCCEEEE
Confidence 233333333221 12222221 122333332221 111111 112245689999995 55554
Q ss_pred EeC---CCcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCC-EEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEE
Q 009614 405 SSA---DKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCY 478 (531)
Q Consensus 405 ~s~---Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~-~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~ 478 (531)
+.. .+.|..+++.... ...+. .-.....++++| ++. ++++....+.|.++|+.......+.........++.
T Consensus 139 ~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~ 216 (267)
T 1npe_A 139 TDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS 216 (267)
T ss_dssp EECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEE
T ss_pred EECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEE
Confidence 443 3688888886433 23332 234678999999 655 445555678999999987554433333334566665
Q ss_pred ccCCCEEEEEe-CCCcEEEEeCCCCeEEEEee
Q 009614 479 CPDGKGGIVGT-MTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 479 spdg~~l~sgs-~dg~I~iwd~~~~~l~~~~~ 509 (531)
++..|+++. ..+.|..+|..+++.+..+.
T Consensus 217 --d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 217 --YGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp --ETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred --eCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 345555554 56889999999999887665
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.53 E-value=1.5e-06 Score=86.50 Aligned_cols=226 Identities=8% Similarity=0.025 Sum_probs=131.6
Q ss_pred ccccceeeeCCCCeEEeeec-----CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCE-EEEEe---CCC
Q 009614 236 DRHGSATLKPGDHELTLGQR-----MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQY-LASGG---EDG 306 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~-----dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~-Lasgs---~Dg 306 (531)
..+..++++++|++.++-.. .+.|.+||..+..... .+........+...+..|++++++.. +++.. .++
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~-~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSR-VIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEE-EEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEE-EEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 45567899999987776544 5789999987554211 00000001123345789999986544 45554 678
Q ss_pred cEEEEEcccCccccceecCCCC-CeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee
Q 009614 307 TVRVWKVIEHERLDGFDVQDTD-PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (531)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
.|.+||+.+++....+..+... .....+... .. .......++.+..
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~-----------g~-----~~~~~~~~g~~~~----------------- 192 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVID-----------GV-----PVQIGQPDGTVIR----------------- 192 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEET-----------TE-----ECBEECTTSCEEC-----------------
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeEC-----------CE-----EEEeccCCCceec-----------------
Confidence 9999999877654333211000 000000000 00 0000011111100
Q ss_pred cCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCC-----Ce--------EEEEeecCCceEEEEEeeCCCCEEEEEeCCC
Q 009614 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGI-----DR--------CLRVFSHNNYVTSVAFNPVDDNYFISGSIDG 451 (531)
Q Consensus 386 ~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~-----~~--------~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg 451 (531)
-...+..|+|+|++ .|+.+..++. ++|.+.. +. .+..+.+......+++++ +++++++...++
T Consensus 193 -~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~ 269 (343)
T 2qe8_A 193 -PHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHS 269 (343)
T ss_dssp -CCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGT
T ss_pred -eecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCC
Confidence 11246789999999 7777776663 4444321 10 012223444567799999 899999999999
Q ss_pred eEEEEeCCCCeEEEecC--CCCceEEEEEccCCCEEEEEeCCCcEEEEe
Q 009614 452 KVRIWEVRRCQVVDYTD--IREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (531)
Q Consensus 452 ~I~Iwd~~~~~~~~~~~--~~~~v~~v~~spdg~~l~sgs~dg~I~iwd 498 (531)
.|.+||..+++...... .-..++.++|.++|.++++.+..+.+.+|.
T Consensus 270 ~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 270 AIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred eEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 99999996666543322 245689999999999888887666554443
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.52 E-value=8.3e-06 Score=77.66 Aligned_cols=180 Identities=9% Similarity=0.010 Sum_probs=120.6
Q ss_pred CEEEEEEccCCCEEEEEeC--CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCC
Q 009614 286 SILTMKFSLDGQYLASGGE--DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSD 363 (531)
Q Consensus 286 ~I~~l~fspdg~~Lasgs~--Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (531)
....|.|++++.++++.+. ++.|++.|+.+++.+..+....
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~------------------------------------- 64 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD------------------------------------- 64 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-------------------------------------
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-------------------------------------
Confidence 3689999998765555553 6799999999988655443211
Q ss_pred ceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecC-CceEEEEEeeCCCC
Q 009614 364 LTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHN-NYVTSVAFNPVDDN 442 (531)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~-~~V~sv~fsp~d~~ 442 (531)
+ .....+++..+...++.-.++.+.++|..+.+.+..+... .. ...+++ ++.
T Consensus 65 -----------------------~-~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~-Dg~ 117 (266)
T 2iwa_A 65 -----------------------S-YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLAT-DGK 117 (266)
T ss_dssp -----------------------T-CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEE-CSS
T ss_pred -----------------------C-cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEE-CCC
Confidence 0 0112344443224445557899999999999999998754 32 234566 666
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEecCC------CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee-ecc-
Q 009614 443 YFISGSIDGKVRIWEVRRCQVVDYTDI------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC-LQG- 514 (531)
Q Consensus 443 ~l~sgs~Dg~I~Iwd~~~~~~~~~~~~------~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~-~~~- 514 (531)
.++++..++.|.++|..+.+++..... -..++.+.|. +|...+....++.|.+.|+.+++.+..+.+. +..
T Consensus 118 ~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~ 196 (266)
T 2iwa_A 118 ILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKK 196 (266)
T ss_dssp SEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHH
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence 666666789999999999887743221 1236788888 7755555556889999999999999888764 111
Q ss_pred ---cccCCCceeeeEEEee
Q 009614 515 ---KKKLPGKRITGFQVVK 530 (531)
Q Consensus 515 ---~kk~~~~~It~l~f~p 530 (531)
..........||+|.|
T Consensus 197 ~~~~~~~~~~v~nGIa~~~ 215 (266)
T 2iwa_A 197 LIDEGFRDIDVLNGIAWDQ 215 (266)
T ss_dssp HHHTTCTTCCCEEEEEEET
T ss_pred cccccccccCceEEEEEcC
Confidence 1123335668888875
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.47 E-value=1.4e-05 Score=87.22 Aligned_cols=110 Identities=11% Similarity=0.100 Sum_probs=85.0
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEeecC--C----------ce------------------------EEEEEeeCCCCEE
Q 009614 401 FLLSSSADKTVRLWQVGIDRCLRVFSHN--N----------YV------------------------TSVAFNPVDDNYF 444 (531)
Q Consensus 401 ~l~s~s~Dg~V~lwdl~~~~~l~~~~h~--~----------~V------------------------~sv~fsp~d~~~l 444 (531)
.++.++.+|.|.++|..+++.+..+... . ++ ..++|+| +..++
T Consensus 329 ~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~ 407 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLV 407 (677)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEE
Confidence 6888999999999999999998766411 0 01 1568899 77777
Q ss_pred EEEeC-------------------------------------------CCeEEEEeCCCCeEEEecCCCCceEEEEEccC
Q 009614 445 ISGSI-------------------------------------------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPD 481 (531)
Q Consensus 445 ~sgs~-------------------------------------------Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spd 481 (531)
++... .|.|..||+.+++++-...+...+....+..+
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA 487 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEET
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeC
Confidence 76543 27899999999998754444444555567778
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 482 GKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 482 g~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
+.++++++.||.+++||+.+++++.++.+.
T Consensus 488 g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 488 GNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 889999999999999999999999888754
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.45 E-value=1.7e-05 Score=74.79 Aligned_cols=178 Identities=13% Similarity=0.108 Sum_probs=120.2
Q ss_pred EEEEEEccCCCEEEEEeCCC--cEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCc
Q 009614 287 ILTMKFSLDGQYLASGGEDG--TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (531)
Q Consensus 287 I~~l~fspdg~~Lasgs~Dg--~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (531)
...|.|+ ++.++.+.+.+| .|+++|+.+++.+..+.....
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~------------------------------------- 86 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR------------------------------------- 86 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-------------------------------------
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-------------------------------------
Confidence 5789998 677777778776 899999999986655432110
Q ss_pred eEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEE
Q 009614 365 TCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYF 444 (531)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l 444 (531)
..-..++...+...+..-.++.+.+||..+.+.+.++.....-..++ + ++..|
T Consensus 87 ------------------------~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~-dg~~L 139 (262)
T 3nol_A 87 ------------------------YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--H-NDQYL 139 (262)
T ss_dssp ------------------------CCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEE--E-CSSCE
T ss_pred ------------------------cceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEe--c-CCCEE
Confidence 00112233222233444568899999999999999998654334444 4 56666
Q ss_pred EEEeCCCeEEEEeCCCCeEEEecCC---C---CceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee-eccc--
Q 009614 445 ISGSIDGKVRIWEVRRCQVVDYTDI---R---EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC-LQGK-- 515 (531)
Q Consensus 445 ~sgs~Dg~I~Iwd~~~~~~~~~~~~---~---~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~-~~~~-- 515 (531)
+.+..+++|.++|..+.+++..... . ..++.+.|. +|+..+..-.++.|.+.|..+++.+..+... +...
T Consensus 140 ~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~ 218 (262)
T 3nol_A 140 IMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAG 218 (262)
T ss_dssp EECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSC
T ss_pred EEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccc
Confidence 6655678999999999887743221 1 334567776 7765555556889999999999999988764 2211
Q ss_pred -ccCCCceeeeEEEee
Q 009614 516 -KKLPGKRITGFQVVK 530 (531)
Q Consensus 516 -kk~~~~~It~l~f~p 530 (531)
.........||+|.|
T Consensus 219 ~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 219 PLPSPIDVLNGIAWDK 234 (262)
T ss_dssp SCCSSCCCEEEEEEET
T ss_pred cccCcCCceEEEEEcC
Confidence 123456789999986
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.41 E-value=1.8e-05 Score=86.46 Aligned_cols=110 Identities=13% Similarity=0.154 Sum_probs=81.0
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEeecCC--c--------------------------------------eEEEEEeeCC
Q 009614 401 FLLSSSADKTVRLWQVGIDRCLRVFSHNN--Y--------------------------------------VTSVAFNPVD 440 (531)
Q Consensus 401 ~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~--~--------------------------------------V~sv~fsp~d 440 (531)
.++.++.+|.++++|..+++.+....... . -..++|+| +
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~ 399 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-D 399 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-T
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-C
Confidence 67888899999999999999875432110 0 11278888 6
Q ss_pred CCEEEEEeC---------------------------------------------CCeEEEEeCCCCeEEEecCCCCceEE
Q 009614 441 DNYFISGSI---------------------------------------------DGKVRIWEVRRCQVVDYTDIREIVSA 475 (531)
Q Consensus 441 ~~~l~sgs~---------------------------------------------Dg~I~Iwd~~~~~~~~~~~~~~~v~~ 475 (531)
..++++... +|.|+.||+.+++++-...+...+..
T Consensus 400 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~ 479 (689)
T 1yiq_A 400 TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNG 479 (689)
T ss_dssp TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCC
T ss_pred CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccC
Confidence 667666532 37899999999998743333333444
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 476 VCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 476 v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
..+...+.++++|+.||.++.||.++|+++.+++..
T Consensus 480 g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 480 GTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 456667889999999999999999999999887753
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.40 E-value=2.8e-05 Score=73.38 Aligned_cols=178 Identities=11% Similarity=0.014 Sum_probs=122.4
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCce
Q 009614 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLT 365 (531)
Q Consensus 286 ~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (531)
-...|.|+ ++.++.+.+.+|.|+++|+.+++.+..+ ....
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-------------------------------------- 95 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-------------------------------------- 95 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT--------------------------------------
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC--------------------------------------
Confidence 35788887 4667788888999999999998865443 1110
Q ss_pred EEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEE
Q 009614 366 CVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFI 445 (531)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~ 445 (531)
..-..++...+.+.+..-.++.+.+||..+.+.+.++.....-+.++ + ++..|+
T Consensus 96 -----------------------~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~-Dg~~L~ 149 (268)
T 3nok_A 96 -----------------------IFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--Y-WNGKLV 149 (268)
T ss_dssp -----------------------CCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--E-ETTEEE
T ss_pred -----------------------cceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--c-CCCEEE
Confidence 00112333333344445578999999999999999998655445555 4 567777
Q ss_pred EEeCCCeEEEEeCCCCeEEEecC---CC---CceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee-eccc---
Q 009614 446 SGSIDGKVRIWEVRRCQVVDYTD---IR---EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC-LQGK--- 515 (531)
Q Consensus 446 sgs~Dg~I~Iwd~~~~~~~~~~~---~~---~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~-~~~~--- 515 (531)
.+..+++|.++|..+.+++.... .. ..++.+.|. +|+..+..-.++.|.+.|..+++.+..+... +...
T Consensus 150 vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~ 228 (268)
T 3nok_A 150 RSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAG 228 (268)
T ss_dssp EECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTT
T ss_pred EECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccc
Confidence 77778999999999988774222 11 245667777 7765555546889999999999999988865 2111
Q ss_pred -ccCCCceeeeEEEee
Q 009614 516 -KKLPGKRITGFQVVK 530 (531)
Q Consensus 516 -kk~~~~~It~l~f~p 530 (531)
.........||+|.|
T Consensus 229 ~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 229 QVTNPEAVLNGIAVEP 244 (268)
T ss_dssp TCCCTTCCEEEEEECT
T ss_pred cccCcCCceEEEEEcC
Confidence 123446789999876
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.37 E-value=0.0001 Score=68.74 Aligned_cols=180 Identities=11% Similarity=0.040 Sum_probs=120.8
Q ss_pred CCEEEEEEccCCCEEEEEeCCC--cEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCC
Q 009614 285 GSILTMKFSLDGQYLASGGEDG--TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSS 362 (531)
Q Consensus 285 ~~I~~l~fspdg~~Lasgs~Dg--~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (531)
.-...+.|++ +.++.+.+.+| .|+.+|+.+++.+..+......
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~---------------------------------- 65 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY---------------------------------- 65 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC----------------------------------
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc----------------------------------
Confidence 3477999986 66667777754 8999999999866554322110
Q ss_pred CceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCC
Q 009614 363 DLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDN 442 (531)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~ 442 (531)
.-..++...+......-.++.+.+||..+.+.+.++.....-..++ + ++.
T Consensus 66 ---------------------------fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~-dg~ 115 (243)
T 3mbr_X 66 ---------------------------FGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--S-DDS 115 (243)
T ss_dssp ---------------------------CEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--E-CSS
T ss_pred ---------------------------ceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--e-CCC
Confidence 0012233222244445578999999999999999998655445555 4 556
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEecCC---C---CceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee-eccc
Q 009614 443 YFISGSIDGKVRIWEVRRCQVVDYTDI---R---EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC-LQGK 515 (531)
Q Consensus 443 ~l~sgs~Dg~I~Iwd~~~~~~~~~~~~---~---~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~-~~~~ 515 (531)
.|+.+..+++|.++|..+.+++..... . ..++.+.|. +|+..+..-.+..|.+.|..+++.+..+.+. +...
T Consensus 116 ~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~ 194 (243)
T 3mbr_X 116 HLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPD 194 (243)
T ss_dssp CEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTT
T ss_pred EEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccc
Confidence 565556688999999999887742221 1 345666765 6765555546889999999999999988765 2211
Q ss_pred c----cCCCceeeeEEEee
Q 009614 516 K----KLPGKRITGFQVVK 530 (531)
Q Consensus 516 k----k~~~~~It~l~f~p 530 (531)
. ........||++.|
T Consensus 195 ~~~~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 195 ADALTDSTNDVLNGIAFDA 213 (243)
T ss_dssp TTSCCCTTSSCEEEEEEET
T ss_pred cccccCCcCCceEEEEEcC
Confidence 1 23446789999986
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.36 E-value=5.5e-08 Score=98.22 Aligned_cols=147 Identities=13% Similarity=0.052 Sum_probs=81.2
Q ss_pred CCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccc
Q 009614 295 DGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (531)
Q Consensus 295 dg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (531)
++..+++++.||.|+.||..+|+.+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------------------------------------------------- 37 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------------------------------------------------- 37 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--------------------------------------------------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--------------------------------------------------
Confidence 577899999999999999998876543321
Q ss_pred cccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEeecC--CceE-EEEEeeCCCCEEEEEeCC
Q 009614 375 RLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHN--NYVT-SVAFNPVDDNYFISGSID 450 (531)
Q Consensus 375 ~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~--~~V~-sv~fsp~d~~~l~sgs~D 450 (531)
+.+.+..+..++ .+++++.|+.|+.||..+++.+..+... ..+. +..+. .+..+++++.|
T Consensus 38 --------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~--~~~~v~~g~~d 101 (369)
T 2hz6_A 38 --------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS--SDGILYMGKKQ 101 (369)
T ss_dssp --------------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEE
T ss_pred --------------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe--cCCEEEEEeCC
Confidence 111111222445 6777789999999999998887666422 1111 00111 34577888889
Q ss_pred CeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeee
Q 009614 451 GKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 451 g~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~ 510 (531)
+.|+.||..+++.+....... .+.++|++..|++++.++.|+.||..+|+++.+++.
T Consensus 102 g~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp EEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 999999999998773222222 245677888999999999999999999998766553
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.36 E-value=6.9e-05 Score=76.11 Aligned_cols=116 Identities=8% Similarity=0.171 Sum_probs=84.1
Q ss_pred eEEEEcCCCeEEEEeCC------CcEEEEECCCCeEEEEeecC----CceEEEEEeeCCCCEEEEEe-------------
Q 009614 392 LDLSWSKNGFLLSSSAD------KTVRLWQVGIDRCLRVFSHN----NYVTSVAFNPVDDNYFISGS------------- 448 (531)
Q Consensus 392 ~~l~~sp~~~l~s~s~D------g~V~lwdl~~~~~l~~~~h~----~~V~sv~fsp~d~~~l~sgs------------- 448 (531)
..+...|+|.++++..+ +.|.++|..+.+.+..+... ..-..+.|+| +++.+++..
T Consensus 141 h~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 141 HTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCT
T ss_pred cceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccch
Confidence 45566788855555444 78999999999999998622 2234688899 899888874
Q ss_pred ------CCCeEEEEeCCCCeEEEecCCC---CceEEEEE--ccCCCEEEEEe------CCCcEEEEeCCCCeEEEEe
Q 009614 449 ------IDGKVRIWEVRRCQVVDYTDIR---EIVSAVCY--CPDGKGGIVGT------MTGNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 449 ------~Dg~I~Iwd~~~~~~~~~~~~~---~~v~~v~~--spdg~~l~sgs------~dg~I~iwd~~~~~l~~~~ 508 (531)
.+.+|.+||+.+++++...... .....+.| +|+|+++.+++ .+++|.+|....++.....
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 3689999999998877544332 34555656 99999988877 4668888877766654433
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.36 E-value=0.00014 Score=71.38 Aligned_cols=209 Identities=8% Similarity=-0.009 Sum_probs=123.0
Q ss_pred ccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccc------------eEEcccCCCEEEEEEcc-CCCEEEEEeC
Q 009614 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTG------------QEFLAHEGSILTMKFSL-DGQYLASGGE 304 (531)
Q Consensus 238 ~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~------------~~l~~H~~~I~~l~fsp-dg~~Lasgs~ 304 (531)
...++++++|.++.++..++.|..|+.............. .........+.+|++.+ +|+ |+.+..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEEC
Confidence 4468899999988888889999999876432210000000 00001123578999998 665 555544
Q ss_pred CCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe
Q 009614 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (531)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (531)
.+.|..+|..++.. ..+.. ..
T Consensus 100 ~~~i~~~d~~~g~~-~~~~~----------------------------------------------------------~~ 120 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-TQLAT----------------------------------------------------------SV 120 (322)
T ss_dssp TTEEEEECTTCEEC-EEEES----------------------------------------------------------EE
T ss_pred CCCEEEEeCCCCEE-EEecc----------------------------------------------------------cC
Confidence 44577777644321 11100 00
Q ss_pred e-cCCCCeeEEEEcC-CCeEEEEeC------------------CCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEE
Q 009614 385 Q-GHSSEVLDLSWSK-NGFLLSSSA------------------DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYF 444 (531)
Q Consensus 385 ~-~h~~~I~~l~~sp-~~~l~s~s~------------------Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l 444 (531)
. ........+++.+ +|.|+.+.. ++.|..||..+++.............|+|+| ++++|
T Consensus 121 ~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~-dg~~l 199 (322)
T 2fp8_A 121 DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSA-DSSFV 199 (322)
T ss_dssp TTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECT-TSSEE
T ss_pred CCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECC-CCCEE
Confidence 0 0012356677888 773333321 3678888887776543333234456799999 88755
Q ss_pred EEE-eCCCeEEEEeCCCC---eEEEecCCCCceEEEEEccCCCEEEEEeC----------CCcEEEEeCCCCeEEEEee
Q 009614 445 ISG-SIDGKVRIWEVRRC---QVVDYTDIREIVSAVCYCPDGKGGIVGTM----------TGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 445 ~sg-s~Dg~I~Iwd~~~~---~~~~~~~~~~~v~~v~~spdg~~l~sgs~----------dg~I~iwd~~~~~l~~~~~ 509 (531)
+.+ ...+.|.+|++... ....+..... ...+++.++|++.++... .+.|..+|.. ++++..+.
T Consensus 200 yv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~ 276 (322)
T 2fp8_A 200 LVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIP 276 (322)
T ss_dssp EEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEE
T ss_pred EEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEE
Confidence 544 56789999998752 2221112223 788999999987666544 4678888875 66666554
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.34 E-value=0.0002 Score=71.67 Aligned_cols=237 Identities=11% Similarity=0.002 Sum_probs=134.2
Q ss_pred CCCeEEeeecCCeEEEEeCCCCcccccccccceEEccc--CCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCcccccee
Q 009614 246 GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAH--EGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFD 323 (531)
Q Consensus 246 dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H--~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~ 323 (531)
.+..+.+++.++.|..+|..+++..............+ ...+.+. ...++..++.++.++.|..+|..+++......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 45677777788999999987665432211000000000 1223222 22245678888899999999999998766554
Q ss_pred cCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCC-----eeEEEEcC
Q 009614 324 VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE-----VLDLSWSK 398 (531)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----I~~l~~sp 398 (531)
............ ....+.++.++.++.++..... .+..+...... .......
T Consensus 131 ~~~~~~~~p~~~------------------~~~v~v~~~~g~l~~~d~~tG~----~~W~~~~~~~~~~~~~~~~~~~~- 187 (376)
T 3q7m_A 131 VAGEALSRPVVS------------------DGLVLIHTSNGQLQALNEADGA----VKWTVNLDMPSLSLRGESAPTTA- 187 (376)
T ss_dssp CSSCCCSCCEEE------------------TTEEEEECTTSEEEEEETTTCC----EEEEEECCC-----CCCCCCEEE-
T ss_pred CCCceEcCCEEE------------------CCEEEEEcCCCeEEEEECCCCc----EEEEEeCCCCceeecCCCCcEEE-
Confidence 432211110000 0011222334455555543321 11111111110 0112222
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEEeecCCce-----EE---EEEee-CCCCEEEEEeCCCeEEEEeCCCCeEEEecCC
Q 009614 399 NGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYV-----TS---VAFNP-VDDNYFISGSIDGKVRIWEVRRCQVVDYTDI 469 (531)
Q Consensus 399 ~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V-----~s---v~fsp-~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~ 469 (531)
++.++.++.++.|..+|..+++.+..+....+. .. +...| ..+..++.++.++.|..+|..+++.+-....
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 457888888999999999999988777532210 00 11111 0346778888899999999999987743322
Q ss_pred CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 470 REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 470 ~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
.....+.. ++..|++++.+|.|..+|..+++.+.+.+
T Consensus 268 -~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 268 -GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp -CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred -CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 23344433 46678888899999999999999876554
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.31 E-value=9.1e-05 Score=74.21 Aligned_cols=233 Identities=7% Similarity=0.042 Sum_probs=134.0
Q ss_pred CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecC
Q 009614 246 GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQ 325 (531)
Q Consensus 246 dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~ 325 (531)
++..+.+++.++.|..+|..+++.... ............. .+..++.++.++.|..+|..+++........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~-------~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQ-------TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEE-------EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEE-------EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCC
Confidence 456777888899999999886654322 1111111111112 2447888889999999999999876665443
Q ss_pred CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC--C-----C---eeEEE
Q 009614 326 DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS--S-----E---VLDLS 395 (531)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~-----~---I~~l~ 395 (531)
..... .. ...... .. ....+.+..++.++.++...... +....... + . +...-
T Consensus 173 ~~~~~---~~--~~~~~~-~~-------~~~v~~g~~~g~l~~~d~~tG~~----~w~~~~~~~~~~~~~~~~~~~~~~p 235 (376)
T 3q7m_A 173 MPSLS---LR--GESAPT-TA-------FGAAVVGGDNGRVSAVLMEQGQM----IWQQRISQATGSTEIDRLSDVDTTP 235 (376)
T ss_dssp C--------C--CCCCCE-EE-------TTEEEECCTTTEEEEEETTTCCE----EEEEECCC-----------CCCCCC
T ss_pred CCcee---ec--CCCCcE-EE-------CCEEEEEcCCCEEEEEECCCCcE----EEEEecccCCCCcccccccccCCCc
Confidence 21100 00 000000 00 01112233344555555432211 11111100 0 0 10100
Q ss_pred EcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecC-C-CCce
Q 009614 396 WSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD-I-REIV 473 (531)
Q Consensus 396 ~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~-~-~~~v 473 (531)
...++.++.++.++.|..+|..+++.+....... ...+.. ++..++.++.++.|..+|..+++.+-... . ...+
T Consensus 236 ~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~---~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 311 (376)
T 3q7m_A 236 VVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV---DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLL 311 (376)
T ss_dssp EEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE---ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCC
T ss_pred EEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE---ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcc
Confidence 1124578888889999999999999887765333 344443 45678888889999999999998763222 1 1222
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeee
Q 009614 474 SAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 474 ~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~ 510 (531)
..... .+..|++++.+|.++++|..+++++.+.+.
T Consensus 312 ~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 312 TSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp CCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 22222 356788999999999999999999877664
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.30 E-value=3.8e-05 Score=83.75 Aligned_cols=78 Identities=13% Similarity=0.194 Sum_probs=60.9
Q ss_pred CcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe--cCCCCceEEEEEccCCCEEE
Q 009614 409 KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDIREIVSAVCYCPDGKGGI 486 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~--~~~~~~v~~v~~spdg~~l~ 486 (531)
+.|..||+.+++.+..+.+..++....+.+ .+.+++.++.||.+++||+.+++++.. .++.....-+.|.++|+.++
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 789999999999998888776666667777 778888899999999999999998842 23333334567778887554
Q ss_pred E
Q 009614 487 V 487 (531)
Q Consensus 487 s 487 (531)
+
T Consensus 536 ~ 536 (677)
T 1kb0_A 536 S 536 (677)
T ss_dssp E
T ss_pred E
Confidence 4
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.29 E-value=0.00014 Score=69.26 Aligned_cols=189 Identities=6% Similarity=0.008 Sum_probs=123.0
Q ss_pred ceeeeCCCCeEEeeec--CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEE-eCCCcEEEEEcccC
Q 009614 240 SATLKPGDHELTLGQR--MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASG-GEDGTVRVWKVIEH 316 (531)
Q Consensus 240 s~~fspdg~~lasgs~--dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasg-s~Dg~I~iWd~~~~ 316 (531)
.+.|++++.+.++.+. ++.|.+.|..+++.... . .+..+. ....+++. +..|+.+ -.++.|.++|..+.
T Consensus 25 Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~-i----~l~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENI-H----KMDDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEE-E----ECCTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTTT
T ss_pred cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEE-E----ecCCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCCC
Confidence 4789998765555433 68999999986654321 0 111221 22245554 4455444 45789999999887
Q ss_pred ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEE
Q 009614 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (531)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~ 396 (531)
+.+..+... ... ...+
T Consensus 97 ~v~~~i~~g--------------------------------------------------------------~~~--g~gl 112 (266)
T 2iwa_A 97 SNIKNFTHQ--------------------------------------------------------------MKD--GWGL 112 (266)
T ss_dssp EEEEEEECC--------------------------------------------------------------SSS--CCEE
T ss_pred cEEEEEECC--------------------------------------------------------------CCC--eEEE
Confidence 755444211 000 1123
Q ss_pred cCCC-eEEEEeCCCcEEEEECCCCeEEEEeec---C---CceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCC
Q 009614 397 SKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH---N---NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI 469 (531)
Q Consensus 397 sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h---~---~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~ 469 (531)
++++ .|+.+..++.|.++|..+.+.+..+.- . ..++.+.|. ++.+++....++.|.+.|..+++++.....
T Consensus 113 t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 113 ATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp EECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred EECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 3455 565666788999999999988887752 1 236778887 566666665688999999999998854332
Q ss_pred C--------------CceEEEEEccCCCEE-EEEeCCCcEEEEeCCCC
Q 009614 470 R--------------EIVSAVCYCPDGKGG-IVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 470 ~--------------~~v~~v~~spdg~~l-~sgs~dg~I~iwd~~~~ 502 (531)
. ...+.|+|+|+++.| +++...+++...++...
T Consensus 191 ~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 191 PNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 1 356899999998755 55556788888887654
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=3.5e-05 Score=80.96 Aligned_cols=236 Identities=11% Similarity=0.028 Sum_probs=141.4
Q ss_pred CCCCeEEeeec-CCeEEEEeCCCCcccccccccceEEc-ccCCCEEEEEE-c-cCCCEEEEEe-----------------
Q 009614 245 PGDHELTLGQR-MRRVRVHPVKKQSRELSSLYTGQEFL-AHEGSILTMKF-S-LDGQYLASGG----------------- 303 (531)
Q Consensus 245 pdg~~lasgs~-dg~I~vwd~~~~~~~~~~~~~~~~l~-~H~~~I~~l~f-s-pdg~~Lasgs----------------- 303 (531)
+||+++..... +++|.+.|+...+. .+.+. .....+..+++ + |++.+++.++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~-------~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKC-------DAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEE-------EEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceE-------eeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccc
Confidence 38888766554 66799999985432 22121 12245788888 5 9999998885
Q ss_pred -CCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCccee
Q 009614 304 -EDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (531)
Q Consensus 304 -~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (531)
.++.+.+.|..+.+....+.... .+..+.+.++.. .++................. ... ..+.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk-~~~vt~~~se~~~~i~~~~~--~~~-------------d~v~ 234 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGK-WAFSTSYNSEKGMTLPEMTA--AEM-------------DHIV 234 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSS-EEEEEESCTTCCSSHHHHTC--CSE-------------EEEE
T ss_pred ccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCC-EEEEEecCcccCcchhhccc--ccc-------------ceEE
Confidence 24578888888887777666543 334444443321 11111111111000000000 000 0000
Q ss_pred EeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCC--CeE-EEEeecCCceEEEEEeeCCCCEEEEEe-CCCeEEEEe
Q 009614 383 EFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGI--DRC-LRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWE 457 (531)
Q Consensus 383 ~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~--~~~-l~~~~h~~~V~sv~fsp~d~~~l~sgs-~Dg~I~Iwd 457 (531)
.+.... ...+.++| .+.. +.|.+.|..+ ++. +..+.-.....++.++| |++++++++ .+.+|.++|
T Consensus 235 V~~~~~----~~~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sP-DGk~v~V~~~~s~~VsVid 305 (595)
T 1fwx_A 235 VFNIAE----IEKAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAP-DKKHLCVAGKLSPTVTVLD 305 (595)
T ss_dssp EEEHHH----HHHHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECT-TSSEEEEECTTSSBEEEEE
T ss_pred Eeeccc----eeEeccCCCeeEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcC-CCCEEEEeCCCCCeEEEEE
Confidence 010000 00123445 2222 5699999998 555 56666556678899999 888776655 678999999
Q ss_pred CCCCe------------EEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC----------CeEEEEeeeeec
Q 009614 458 VRRCQ------------VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD----------NQLYQQNQICLQ 513 (531)
Q Consensus 458 ~~~~~------------~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~----------~~l~~~~~~~~~ 513 (531)
+.+.+ ++...........++|+|+|...++...|+.|..||+.. .+.+++..+..+
T Consensus 306 ~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 306 VTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp GGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred CcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence 99753 444455566789999999995555677799999999987 667777776544
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.24 E-value=9e-05 Score=72.38 Aligned_cols=217 Identities=14% Similarity=0.062 Sum_probs=130.7
Q ss_pred CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCC
Q 009614 247 DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQD 326 (531)
Q Consensus 247 g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~ 326 (531)
+..+..++.++.|..++.. +.... .+..+...+.++...+++. |+.++.++.|..+|.. ++....+....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~-------~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKW-------RFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEE-------EEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEE-------EEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 5567778788999999876 33211 1222344566667777776 5667788999999987 66554444332
Q ss_pred CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCeEEEEe
Q 009614 327 TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSS 406 (531)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s 406 (531)
.....+.. .....+.. ++ +.+..++.. .+.+..+......+.++...+++.|..++
T Consensus 177 ~~~~~~~~--d~~g~l~v---------------~t--~~l~~~d~~-----g~~~~~~~~~~~~~~~~~~~~~g~l~v~t 232 (330)
T 3hxj_A 177 AITSAASI--GKDGTIYF---------------GS--DKVYAINPD-----GTEKWNFYAGYWTVTRPAISEDGTIYVTS 232 (330)
T ss_dssp CCCSCCEE--CTTCCEEE---------------ES--SSEEEECTT-----SCEEEEECCSSCCCSCCEECTTSCEEEEE
T ss_pred CceeeeEE--cCCCEEEE---------------Ee--CEEEEECCC-----CcEEEEEccCCcceeceEECCCCeEEEEc
Confidence 22222111 11111111 11 334444421 12233333344668888888888888888
Q ss_pred CCCcEEEEECCCCeEEEEeec-CCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE-EecCCCCceEEEEEccCCCE
Q 009614 407 ADKTVRLWQVGIDRCLRVFSH-NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKG 484 (531)
Q Consensus 407 ~Dg~V~lwdl~~~~~l~~~~h-~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~ 484 (531)
.++.|..+|. ++..+..+.. ...+.++.+.+ +..|..++.+|.|..+|. +++.+ ........+.++...++|.
T Consensus 233 ~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~--~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~- 307 (330)
T 3hxj_A 233 LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGN--TDTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT- 307 (330)
T ss_dssp TTTEEEEECT-TSCEEEEEECSSCCCSCCEECT--TSCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-
T ss_pred CCCeEEEECC-CCCEeEEeeCCCCccccceEcC--CCeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-
Confidence 8888888874 5555555553 23334455554 445777788889999996 55544 3433445567777777876
Q ss_pred EEEEeCCCcEEEEeCCCC
Q 009614 485 GIVGTMTGNCRFYDIKDN 502 (531)
Q Consensus 485 l~sgs~dg~I~iwd~~~~ 502 (531)
|.+++.+|.+++......
T Consensus 308 l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 308 IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp EEEECTTSCEEEEEC---
T ss_pred EEEEcCCCeEEEEecccc
Confidence 667889999999876543
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.13 E-value=0.00018 Score=70.11 Aligned_cols=184 Identities=14% Similarity=0.026 Sum_probs=111.3
Q ss_pred CCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccc
Q 009614 296 GQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFR 375 (531)
Q Consensus 296 g~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (531)
+..|..++.++.|..+|.. ++..............+.. ..... ...++.++.+..++.. .
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~--~~~g~---------------l~vgt~~~~l~~~d~~-g- 166 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIV--SEDGT---------------IYVGSNDNYLYAINPD-G- 166 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE--CTTSC---------------EEEECTTSEEEEECTT-S-
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEE--cCCCE---------------EEEEcCCCEEEEECCC-C-
Confidence 4567788889999999987 6554444332221111111 10111 1122334556666554 1
Q ss_pred ccCcceeEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEE
Q 009614 376 LLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVR 454 (531)
Q Consensus 376 ~~~~~~~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~ 454 (531)
+.+..+......+.++...+++.|+.++ +.|..|| .+++.+..+. ....+.++...+ ++. |..++.++.|.
T Consensus 167 ---~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-~g~-l~v~t~~~gl~ 238 (330)
T 3hxj_A 167 ---TEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE-DGT-IYVTSLDGHLY 238 (330)
T ss_dssp ---CEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT-TSC-EEEEETTTEEE
T ss_pred ---CEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECC-CCe-EEEEcCCCeEE
Confidence 1233333445567778887788666666 8899999 6777666654 445678888877 554 55567788899
Q ss_pred EEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 455 IWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 455 Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
.+|...............+..+.+.+++ .|.+++.+|.|..+|. +++.+..+.
T Consensus 239 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~ 291 (330)
T 3hxj_A 239 AINPDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE 291 (330)
T ss_dssp EECTTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE
T ss_pred EECCCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE
Confidence 9986444444444333444455666566 4777888889999996 677666554
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.13 E-value=8.7e-05 Score=81.05 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=59.9
Q ss_pred CCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-ec-CCCCceEEEEEccCCCEE
Q 009614 408 DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YT-DIREIVSAVCYCPDGKGG 485 (531)
Q Consensus 408 Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~-~~~~~v~~v~~spdg~~l 485 (531)
++.|..||+.+++.+..+.+..++..-.+.. .+.+++.|+.||.|+.||.++++++- +. .......-+.|..+|+..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 4789999999999998887666555556666 78899999999999999999999883 32 222223457788898754
Q ss_pred EE
Q 009614 486 IV 487 (531)
Q Consensus 486 ~s 487 (531)
++
T Consensus 533 v~ 534 (689)
T 1yiq_A 533 VT 534 (689)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.03 E-value=0.0026 Score=60.23 Aligned_cols=219 Identities=9% Similarity=-0.035 Sum_probs=120.6
Q ss_pred ccceeeeCCCCeE-EeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEE-eCCCcEEEEEccc
Q 009614 238 HGSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASG-GEDGTVRVWKVIE 315 (531)
Q Consensus 238 ~~s~~fspdg~~l-asgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasg-s~Dg~I~iWd~~~ 315 (531)
...+++++++..| ++-...+.|.+++....... ..+.........|++++++..|+.+ ...+.|.++++..
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-------~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-------TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-------EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-------EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 4468999976555 45556789999998743221 1122222467899999976555544 5577899998854
Q ss_pred CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEE
Q 009614 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDL 394 (531)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l 394 (531)
.............+..+.+.+.. ..++..... .....+..+.... .....+ .........|
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~-g~lyv~~~~------------~~~~~I~~~~~dg-----~~~~~~~~~~~~~P~gi 172 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVR-GNLYWTDWN------------RDNPKIETSHMDG-----TNRRILAQDNLGLPNGL 172 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTT-TEEEEEECC------------SSSCEEEEEETTS-----CCCEEEECTTCSCEEEE
T ss_pred CCEEEEEECCCCCccEEEEeeCC-CEEEEEECC------------CCCcEEEEEecCC-----CCcEEEEECCCCCCcEE
Confidence 32211111111222333333221 122221111 0012222222211 111111 1223457899
Q ss_pred EEcCCC-e-EEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCC--
Q 009614 395 SWSKNG-F-LLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIR-- 470 (531)
Q Consensus 395 ~~sp~~-~-l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~-- 470 (531)
++++++ . +++....+.|.++|+........+........|+.. .+.++++....+.|.++|..+++.+......
T Consensus 173 a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~ 250 (267)
T 1npe_A 173 TFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQ 250 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSC
T ss_pred EEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccc
Confidence 999975 4 455556789999999765544444333344666653 3445555556789999999999887543322
Q ss_pred CceEEEEEccCCC
Q 009614 471 EIVSAVCYCPDGK 483 (531)
Q Consensus 471 ~~v~~v~~spdg~ 483 (531)
.....|++.|++.
T Consensus 251 ~~p~gi~~~~~~~ 263 (267)
T 1npe_A 251 TRLYGITIALSQC 263 (267)
T ss_dssp CCCCCEEEECSCC
T ss_pred cccceeeecCccC
Confidence 2467788888764
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.00 E-value=0.00045 Score=72.59 Aligned_cols=115 Identities=11% Similarity=0.048 Sum_probs=80.8
Q ss_pred CeeEEEEcCCC--eEEEEeCCCcEEEEECCCCe------------EEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 390 EVLDLSWSKNG--FLLSSSADKTVRLWQVGIDR------------CLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 390 ~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~------------~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
...++.++|+| .++++-.+.+|.++|+.+.+ ......-......++|+| ++...++.-.|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~-dG~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDG-RGNAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECT-TSEEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECC-CCeEEEEEecCCcEEE
Confidence 56789999999 45555578999999998653 344444556788999999 8865667778999999
Q ss_pred EeCCC----------CeEEE-ecCCCCce-----EEEEEccCCCEEEEEeCC--CcE-----------EEEeCCCCeEE
Q 009614 456 WEVRR----------CQVVD-YTDIREIV-----SAVCYCPDGKGGIVGTMT--GNC-----------RFYDIKDNQLY 505 (531)
Q Consensus 456 wd~~~----------~~~~~-~~~~~~~v-----~~v~~spdg~~l~sgs~d--g~I-----------~iwd~~~~~l~ 505 (531)
||+.+ .+++. +..|-.+- ..+.++|||++|+++..- ..+ .++|+.++++.
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCE
T ss_pred EEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEE
Confidence 99977 45554 33332221 122457999999997652 233 89999876643
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.98 E-value=0.00065 Score=72.34 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=77.6
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEeecCC--------------ce--------------------------EEEEEeeCC
Q 009614 401 FLLSSSADKTVRLWQVGIDRCLRVFSHNN--------------YV--------------------------TSVAFNPVD 440 (531)
Q Consensus 401 ~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~--------------~V--------------------------~sv~fsp~d 440 (531)
.++.++.+|.+.++|..+++.+..+.... ++ ..++++| +
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~ 396 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-E 396 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-T
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-C
Confidence 36678889999999999999887764221 11 2357888 5
Q ss_pred CCEEEEEe-------------------------------------CCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCC
Q 009614 441 DNYFISGS-------------------------------------IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (531)
Q Consensus 441 ~~~l~sgs-------------------------------------~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~ 483 (531)
..+|++.+ .+|.|..||+.+++++-...+...+....+...+.
T Consensus 397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg 476 (571)
T 2ad6_A 397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGG 476 (571)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTT
T ss_pred CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCC
Confidence 56665543 35789999999998773322222333333334566
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 484 GGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 484 ~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
.+++++.||.|+.||..+++++.+++..
T Consensus 477 ~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 477 LVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred EEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 7888999999999999999999887753
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.95 E-value=0.0026 Score=61.65 Aligned_cols=224 Identities=13% Similarity=0.060 Sum_probs=122.5
Q ss_pred ceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCC--cEEEEEcccCc
Q 009614 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG--TVRVWKVIEHE 317 (531)
Q Consensus 240 s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg--~I~iWd~~~~~ 317 (531)
.++++++|.++++-...++|..++....... +..-...+..|++.++|+++++..... .|..++..+++
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~---------~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGNQQI---------HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCCEEE---------EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCceEE---------EEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 5799999997777778899999987642211 111234688999999999666554332 36666666665
Q ss_pred cccceecCCCC-CeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccc--ccc--Cccee--EeecCCCC
Q 009614 318 RLDGFDVQDTD-PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF--RLL--EKPLH--EFQGHSSE 390 (531)
Q Consensus 318 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~--~~~~h~~~ 390 (531)
........... ...+.. .....++. .....+.++.++.... .+. ...+. ........
T Consensus 107 ~~~~~~~~~~~~~~g~~~--~~~~~~~v--------------~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITP--LSDTQYLT--------------ADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EEEEEECTTCSCEEEEEE--SSSSEEEE--------------EETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred EEEEEeCCCccccCcccc--cCCCcEEE--------------EECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 32211111100 001110 01111111 1112334444443210 000 00000 00011123
Q ss_pred eeEEEEcCCC--eEEEEeCCCcEEEEECCC-CeE--EEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE
Q 009614 391 VLDLSWSKNG--FLLSSSADKTVRLWQVGI-DRC--LRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (531)
Q Consensus 391 I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~-~~~--l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~ 465 (531)
.+.| ++++ ++++-...+.|..|++.. +.. ...+........|++++ +++++++....+.|.+++.. ++...
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTI 246 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEE
Confidence 4455 6776 445556678999999874 321 22222223456789999 88888887778899999986 55432
Q ss_pred ---ecCCCCceEEEEEc---cCCCEEEEEeCCC
Q 009614 466 ---YTDIREIVSAVCYC---PDGKGGIVGTMTG 492 (531)
Q Consensus 466 ---~~~~~~~v~~v~~s---pdg~~l~sgs~dg 492 (531)
....-..+++++|. |+++.|++++..+
T Consensus 247 ~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 247 IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 22223568999999 8988887776544
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.92 E-value=0.019 Score=63.57 Aligned_cols=246 Identities=11% Similarity=0.045 Sum_probs=138.8
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
.+.++...++|.+.+ |+.++-+.+|+..................-....|.++...++|.+.+ |+.+| |.+|+..++
T Consensus 216 ~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~ 292 (795)
T 4a2l_A 216 QIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFND-LNIYHEGTD 292 (795)
T ss_dssp CEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESSC-EEEEETTTT
T ss_pred eeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCCh-hheEcCCCC
Confidence 344566666666544 444444888887643321100000000001235699999998887544 55554 888987765
Q ss_pred ccccceecCC------CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcccccc---CcceeEeecC
Q 009614 317 ERLDGFDVQD------TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL---EKPLHEFQGH 387 (531)
Q Consensus 317 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~h 387 (531)
.... +.... .......+..+..+.+.. ++..+-+..++....... ..+. .-.-.
T Consensus 293 ~~~~-~~~~~~~~~~l~~~~i~~i~~D~~g~lWi---------------gt~~~Gl~~~~~~~~~~~~~~~~~~-~~~l~ 355 (795)
T 4a2l_A 293 SFAS-YSSNPVENGSLSQRSVRSIFMDSQGGMWL---------------GTYFGGLNYYHPIRNRFKNIRNIPY-KNSLS 355 (795)
T ss_dssp EEEE-ECCCTTSTTSCSSSCEEEEEECTTSCEEE---------------EESSSCEEEECGGGGSSEEECCCTT-SSSCS
T ss_pred eEEE-EecCCCCCCCCCCCcEEEEEEeCCcCEEE---------------EECCCCeEEeCCCcccceEEcCCCC-CCCCC
Confidence 4321 11110 001111222222222221 111222333332211100 0000 00012
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee---------cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeC
Q 009614 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS---------HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEV 458 (531)
Q Consensus 388 ~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~---------h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~ 458 (531)
...|.++...++|.|..|+.++-|..|+..+++...... ....|.++...+ ++++|..|+.++-|.+||.
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeC
Confidence 456899999888888889988889999988776544321 135789999887 7775667778788999999
Q ss_pred CCCeEEEecC-----CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 459 RRCQVVDYTD-----IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 459 ~~~~~~~~~~-----~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
.+++...+.. ....|.++...++|.+.+ |+.+ -+.+||..+++..
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~-Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTLS-ALVRFNPEQRSFT 484 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EESS-CEEEEETTTTEEE
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-EecC-ceeEEeCCCCeEE
Confidence 9887765542 345789999988887544 4444 4889998887654
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.91 E-value=0.0036 Score=58.97 Aligned_cols=202 Identities=12% Similarity=0.118 Sum_probs=124.4
Q ss_pred ccccceeeeCCCCeE-EeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 009614 236 DRHGSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (531)
Q Consensus 236 ~~~~s~~fspdg~~l-asgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~ 314 (531)
+....++++|++..| ++...++.|...|.. +. ..... .+.+ ....-.|++.+++.++++.-.++.+.++++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~-v~~~i----~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD-LIRTI----PLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC-EEEEE----ECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC-EEEEE----ecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 445568999976655 557778888888876 22 11111 1222 2467788999888776765567788888875
Q ss_pred cCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEE
Q 009614 315 EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (531)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l 394 (531)
....+...... ..++. ...++.....|
T Consensus 100 ~~~~i~~~~~~----------------------------------------------------~~~~~-~~~~N~g~EGL 126 (255)
T 3qqz_A 100 PNSEVKILKKI----------------------------------------------------KIPLQ-ESPTNCGFEGL 126 (255)
T ss_dssp TTCCEEEEEEE----------------------------------------------------ECCCS-SCCCSSCCEEE
T ss_pred CCCeeeeeeee----------------------------------------------------ccccc-cccccCCcceE
Confidence 43321100000 00000 01235568899
Q ss_pred EEcCCC-eEEEEeCCCcEEEEECC---CCeEEEEee--------cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 395 SWSKNG-FLLSSSADKTVRLWQVG---IDRCLRVFS--------HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 395 ~~sp~~-~l~s~s~Dg~V~lwdl~---~~~~l~~~~--------h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
+|.|.+ .|+++.......||.+. ....+..+. +...+.+++++|..+.+++.......|.++|....
T Consensus 127 A~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~- 205 (255)
T 3qqz_A 127 AYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE- 205 (255)
T ss_dssp EEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-
T ss_pred EEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-
Confidence 999988 66666665555555553 112222221 23457899999987888888888899999997755
Q ss_pred EEE---ecC-C------CCceEEEEEccCCCEEEEEeCCCcEEEEeC
Q 009614 463 VVD---YTD-I------REIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 463 ~~~---~~~-~------~~~v~~v~~spdg~~l~sgs~dg~I~iwd~ 499 (531)
++. +.. . ....-.|+|.++|++.++ +.-+.++.|.-
T Consensus 206 ~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 206 VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 443 221 1 135688999999985444 66666666643
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.82 E-value=0.00045 Score=65.07 Aligned_cols=121 Identities=13% Similarity=0.064 Sum_probs=90.5
Q ss_pred CeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCceEE--EEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec
Q 009614 390 EVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTS--VAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT 467 (531)
Q Consensus 390 ~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~s--v~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~ 467 (531)
....|.|+.+.++.+.+.+|.|+++|+.+++.+..+ -...... +++. .+.++++.-.++.+.+||..+.+++...
T Consensus 56 ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 457888875337778888899999999999988877 4444433 5543 3556666667899999999999988644
Q ss_pred CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeeccc
Q 009614 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGK 515 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~ 515 (531)
.....-..++ +|++.|+.+..++.|+++|..+.+.+..+++...++
T Consensus 133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~ 178 (268)
T 3nok_A 133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ 178 (268)
T ss_dssp ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc
Confidence 4333334444 678888888889999999999999999888765443
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.79 E-value=0.00049 Score=64.83 Aligned_cols=122 Identities=14% Similarity=0.113 Sum_probs=87.7
Q ss_pred CeeEEEEcCCC-eEEEEeCCC--cEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe
Q 009614 390 EVLDLSWSKNG-FLLSSSADK--TVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY 466 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg--~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~ 466 (531)
....|.|+ ++ ++.+.+.+| .|+.+|+.+++.+..+.-..........+..+.++++.-.++.+.+||..+.+++..
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 34788898 56 666666665 899999999999998875555444333332344555555689999999999998864
Q ss_pred cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecc
Q 009614 467 TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQG 514 (531)
Q Consensus 467 ~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~ 514 (531)
......-..+ ++|++.|+.+..++.|+++|..+.+.+..+++...+
T Consensus 123 i~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 123 FNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp EECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT
T ss_pred EECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC
Confidence 4433322334 467887877777888999999999999988876444
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.78 E-value=0.0033 Score=61.32 Aligned_cols=108 Identities=15% Similarity=0.076 Sum_probs=68.8
Q ss_pred CeeEEEEcCCC-eEEEE-eCCCcEEEEECCCCe--EEEEe-ecCCceEEEEEeeCCCCEEEEEeC----------CCeEE
Q 009614 390 EVLDLSWSKNG-FLLSS-SADKTVRLWQVGIDR--CLRVF-SHNNYVTSVAFNPVDDNYFISGSI----------DGKVR 454 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~-s~Dg~V~lwdl~~~~--~l~~~-~h~~~V~sv~fsp~d~~~l~sgs~----------Dg~I~ 454 (531)
....|+++|++ .|+.+ ...+.|.+|++.... ....+ .... ...|++.+ +++++++... .+.|.
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~ 263 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGI 263 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC-CCCEEEEecCcccccccCCCccEEE
Confidence 34678999998 45544 566889999987521 11222 2233 78899999 8887777654 46788
Q ss_pred EEeCCCCeEE-EecCC----CCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 455 IWEVRRCQVV-DYTDI----REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 455 Iwd~~~~~~~-~~~~~----~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
.+|.. ++.+ .+... ...++.+++ .+++++++....+.|..+++..
T Consensus 264 ~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 264 KFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred EECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 88875 5544 33322 234666666 4666555555677888888753
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.78 E-value=0.029 Score=56.34 Aligned_cols=231 Identities=6% Similarity=-0.090 Sum_probs=126.7
Q ss_pred eEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEE-EEEeCCCcEEEEEcccCccccceecCCC
Q 009614 249 ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHERLDGFDVQDT 327 (531)
Q Consensus 249 ~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-asgs~Dg~I~iWd~~~~~~~~~~~~~~~ 327 (531)
+|+.+. ...|+..++...... .+......+..|+|.+.+..| ++-...+.|..+++........+.....
T Consensus 89 ~l~~~~-~~~I~~i~~~~~~~~--------~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~ 159 (386)
T 3v65_B 89 VLLFAN-RIDIRQVLPHRSEYT--------LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE 159 (386)
T ss_dssp EEEEEC-BSCEEEECTTSCCCE--------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS
T ss_pred eeEeec-CccceeeccCCCcEE--------EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC
Confidence 444333 356777777643221 122233468899999755555 4545678899998876542222222222
Q ss_pred CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCccee-EeecCCCCeeEEEEcCCC-eE-EE
Q 009614 328 DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH-EFQGHSSEVLDLSWSKNG-FL-LS 404 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~I~~l~~sp~~-~l-~s 404 (531)
.+..+.+.+... .++..+. ....+.+.+... .... .+.........|++.|.+ .| ++
T Consensus 160 ~p~glavd~~~g-~lY~~d~--------------~~~~I~~~~~dg-----~~~~~l~~~~l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 160 SPGGLAVDWVHD-KLYWTDS--------------GTSRIEVANLDG-----AHRKVLLWQSLEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp CCCCEEEETTTT-EEEEEET--------------TTTEEEECBTTS-----CSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CccEEEEEeCCC-eEEEEcC--------------CCCeEEEEeCCC-----CceEEeecCCCCCCcEEEEEcCCCeEEEe
Confidence 233333322211 1111111 112233322211 1111 122233567899999865 44 44
Q ss_pred EeCC-CcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-ecCCCCceEEEEEccC
Q 009614 405 SSAD-KTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDIREIVSAVCYCPD 481 (531)
Q Consensus 405 ~s~D-g~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~~~~~~v~~v~~spd 481 (531)
-... +.|..+++.......... .-...+.|+|+|..+.++++-+..+.|..+|+....... ..........|++ ..
T Consensus 220 d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~ 298 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FE 298 (386)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ET
T ss_pred ccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-EC
Confidence 4444 778888887544333332 334578999998455555666667889999987643332 2223445677888 45
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 482 GKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 482 g~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
+.++++-...+.|..++..+++.+..+.
T Consensus 299 ~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 299 DSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 5566666677889999977777665544
No 255
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.78 E-value=0.013 Score=57.59 Aligned_cols=121 Identities=16% Similarity=0.278 Sum_probs=87.9
Q ss_pred CeeEEEE--cCC-C--eEEEEeCCCcEEEEECC-------CCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEe
Q 009614 390 EVLDLSW--SKN-G--FLLSSSADKTVRLWQVG-------IDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (531)
Q Consensus 390 ~I~~l~~--sp~-~--~l~s~s~Dg~V~lwdl~-------~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd 457 (531)
.+..+++ +|. + +++....+|.+..|++. +.+.++.|.....+-.+...+ ....|+.+-.+.-|..++
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd-~~g~Lyv~eEd~GIw~~d 207 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADD-EYGRLYIAEEDEAIWKFS 207 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEET-TTTEEEEEETTTEEEEEE
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcC-CCCeEEEecccceEEEEe
Confidence 3445555 553 3 67888888999999882 446778888888899999998 778888888887777777
Q ss_pred CC-----CCeEEEecC---CCCceEEEEE--ccCCC-EEEEEe-CCCcEEEEeCC-CCeEEEEeeee
Q 009614 458 VR-----RCQVVDYTD---IREIVSAVCY--CPDGK-GGIVGT-MTGNCRFYDIK-DNQLYQQNQIC 511 (531)
Q Consensus 458 ~~-----~~~~~~~~~---~~~~v~~v~~--spdg~-~l~sgs-~dg~I~iwd~~-~~~l~~~~~~~ 511 (531)
.. +.+++...+ ....+..|++ .++++ +|++++ .+++..+||.. +.+.+..+.+.
T Consensus 208 a~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig 274 (355)
T 3amr_A 208 AEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRIT 274 (355)
T ss_dssp CSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEEC
T ss_pred CCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEec
Confidence 55 355665432 2246777777 66776 666666 56789999997 77888877654
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.77 E-value=0.0024 Score=68.17 Aligned_cols=63 Identities=16% Similarity=0.039 Sum_probs=44.0
Q ss_pred CCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 449 IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 449 ~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
.+|.|..||+.+++++-...+..+...-.....+.++++++.||.++.||.++|+++.++++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 347899999999987732222222211112235677888999999999999999999888643
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.76 E-value=0.00098 Score=62.14 Aligned_cols=124 Identities=11% Similarity=-0.030 Sum_probs=90.0
Q ss_pred CCeeEEEEcCCCeEEEEeCC--CcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe
Q 009614 389 SEVLDLSWSKNGFLLSSSAD--KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY 466 (531)
Q Consensus 389 ~~I~~l~~sp~~~l~s~s~D--g~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~ 466 (531)
.....|.|+++.++.+.+.+ ..|+.+|+.+++.+....-..........+..+.+++..-.++.+.+||..+.+++..
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 45678999873255566654 4899999999999998875544443333332455556666789999999999998864
Q ss_pred cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecc
Q 009614 467 TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQG 514 (531)
Q Consensus 467 ~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~ 514 (531)
......-..++ +|+..|+++..++.|.++|..+.+.+..+++...+
T Consensus 101 i~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 101 FRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp EECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred EeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC
Confidence 44444334454 57777777777899999999999999988876544
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.73 E-value=0.0013 Score=71.39 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=47.4
Q ss_pred CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 450 DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 450 Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
+|.|..||+.+++.+-............+...+.++++++.||.++.||..+++++.+++..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 48899999999998733333333333445557888999999999999999999999887653
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.70 E-value=0.0023 Score=68.27 Aligned_cols=61 Identities=20% Similarity=0.095 Sum_probs=43.5
Q ss_pred CCeEEEEeCCCCeEEEecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeee
Q 009614 450 DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 450 Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~ 510 (531)
+|.|..||+.+++.+-.......+..-.....+.++++|+.||.++.||.++|+++.+++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 6889999999998773222222222111222466788899999999999999999988875
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.69 E-value=0.0062 Score=65.94 Aligned_cols=246 Identities=12% Similarity=0.098 Sum_probs=130.5
Q ss_pred ceeeeC-CCCeEEeeecCC-----------eEEEEeCCCCcccccccccceEE-cccCCCEEEEEEccCCCEEEEEeC-C
Q 009614 240 SATLKP-GDHELTLGQRMR-----------RVRVHPVKKQSRELSSLYTGQEF-LAHEGSILTMKFSLDGQYLASGGE-D 305 (531)
Q Consensus 240 s~~fsp-dg~~lasgs~dg-----------~I~vwd~~~~~~~~~~~~~~~~l-~~H~~~I~~l~fspdg~~Lasgs~-D 305 (531)
+.++.| ++++++.|+.+. .+.+||....... .+ ..+ ..+.....++++..+|++++.|+. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~--~~---~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS--DR---TVTVTKHDMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC--CC---EEEECSCCCSSCEEEECTTSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEE--eC---cccCCCCCCccccccCCCCCCEEEeCCCCC
Confidence 457777 888888876542 5788888765432 11 112 223333445778889999999984 5
Q ss_pred CcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCcc--ccccC----c
Q 009614 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV--FRLLE----K 379 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~ 379 (531)
..+.+||..+.+-...-..+.......... ...+.++.+..... .......+.+|++.. |.... .
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~-~~dg~iyv~GG~~~--------~~~~~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSAT-MSDGRVFTIGGSWS--------GGVFEKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEE-CTTSCEEEECCCCC--------SSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred CceEEecCcCCceeECCCCCccccccceEE-ecCCeEEEEeCccc--------CCcccccceEeCCCCCcceeCCCcccc
Confidence 689999998765332211111111111111 11122222221000 000112345555433 22110 1
Q ss_pred ceeEeecCCCCeeEEEEcCCC-eEEEEeC---------CCcEEEEECCCCeEEEEee-cC---------CceEEEEEeeC
Q 009614 380 PLHEFQGHSSEVLDLSWSKNG-FLLSSSA---------DKTVRLWQVGIDRCLRVFS-HN---------NYVTSVAFNPV 439 (531)
Q Consensus 380 ~~~~~~~h~~~I~~l~~sp~~-~l~s~s~---------Dg~V~lwdl~~~~~l~~~~-h~---------~~V~sv~fsp~ 439 (531)
++... .+. ..+..++ .++.++. ...+..||..+........ +. ..-.++.|...
T Consensus 336 p~~~~-~~~-----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~ 409 (656)
T 1k3i_A 336 PMLTA-DKQ-----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV 409 (656)
T ss_dssp GGCCC-CTT-----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETT
T ss_pred ccccc-ccc-----ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCC
Confidence 11111 010 1112233 3334433 3457889988876554332 11 12355666554
Q ss_pred CCCEEEEEeCCC-----------eEEEEeCCCCeEEEec----CCCCceEEEEEccCCCEEEEEeCC-----------Cc
Q 009614 440 DDNYFISGSIDG-----------KVRIWEVRRCQVVDYT----DIREIVSAVCYCPDGKGGIVGTMT-----------GN 493 (531)
Q Consensus 440 d~~~l~sgs~Dg-----------~I~Iwd~~~~~~~~~~----~~~~~v~~v~~spdg~~l~sgs~d-----------g~ 493 (531)
++++++.|+.++ .|.+||..+.+..... .....-.+++..|+|+++++|+.+ ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 778888887543 6889998887655443 112223455677899999999865 46
Q ss_pred EEEEeCCCCeEE
Q 009614 494 CRFYDIKDNQLY 505 (531)
Q Consensus 494 I~iwd~~~~~l~ 505 (531)
+.+||..+++..
T Consensus 490 v~~ydp~t~~W~ 501 (656)
T 1k3i_A 490 PEIYVPEQDTFY 501 (656)
T ss_dssp CEEEEGGGTEEE
T ss_pred eEEEcCCCCcee
Confidence 899999887654
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.65 E-value=0.029 Score=62.06 Aligned_cols=239 Identities=8% Similarity=0.023 Sum_probs=137.4
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
.+.++...++|.+.+ |+..| |.+|+..................-....|.+|...++|. |..|+.++-|.+|+..+.
T Consensus 264 ~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 264 YIRSLAMDSQNRLWI-GTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRN 340 (795)
T ss_dssp BEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGG
T ss_pred eEEEEEEcCCCCEEE-EeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcc
Confidence 355566777776544 44454 778886643321100000000011235799999999887 556777777888987654
Q ss_pred ccccceecCC-----CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEee------
Q 009614 317 ERLDGFDVQD-----TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ------ 385 (531)
Q Consensus 317 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 385 (531)
... .+.... .......+..+..+.+.. ++.++-+..++..... ...+.
T Consensus 341 ~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWi---------------Gt~~~Gl~~~~~~~~~-----~~~~~~~~~~~ 399 (795)
T 4a2l_A 341 RFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWI---------------GTNDGGLNLYNPITQR-----FTSYTLQEDES 399 (795)
T ss_dssp SSE-EECCCTTSSSCSCSSEEEEEECTTSCEEE---------------EESSSCEEEECTTTCC-----EEEECCC----
T ss_pred cce-EEcCCCCCCCCCCCeeEEEEECCCCCEEE---------------EECCCCeEEEcCCCCc-----EEEEecCCCCc
Confidence 321 111100 001111222222222211 2222234444433211 11111
Q ss_pred ---cCCCCeeEEEEcCCCe-EEEEeCCCcEEEEECCCCeEEEEee-----cCCceEEEEEeeCCCCEEEEEeCCCeEEEE
Q 009614 386 ---GHSSEVLDLSWSKNGF-LLSSSADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (531)
Q Consensus 386 ---~h~~~I~~l~~sp~~~-l~s~s~Dg~V~lwdl~~~~~l~~~~-----h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iw 456 (531)
-....|.++...+++. |..|+.++-|.+||..+++...... ....|.++...+ ++.+.+.. . +-|.+|
T Consensus 400 ~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt-~-~Gl~~~ 476 (795)
T 4a2l_A 400 ARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGT-L-SALVRF 476 (795)
T ss_dssp --CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEE-S-SCEEEE
T ss_pred ccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEe-c-CceeEE
Confidence 1235789999888886 9999988889999998876544321 246799999887 67655544 4 458999
Q ss_pred eCCCCeEEEecC-------CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q 009614 457 EVRRCQVVDYTD-------IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 457 d~~~~~~~~~~~-------~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l 504 (531)
|..+++...+.. ....|.++...++|.+.+. +. +-+..||..+++.
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 477 NPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG-GE-EGLSVFKQEGLDI 529 (795)
T ss_dssp ETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEE-ES-SCEEEEEEETTEE
T ss_pred eCCCCeEEEccccccccccCCceEEEEEECCCCCEEEE-eC-CceEEEeCCCCeE
Confidence 998887665432 2357899999999985554 44 4588899887765
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.61 E-value=0.065 Score=52.92 Aligned_cols=240 Identities=7% Similarity=-0.070 Sum_probs=128.0
Q ss_pred cceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEE-EEeCCCcEEEEEcccCc
Q 009614 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGEDGTVRVWKVIEHE 317 (531)
Q Consensus 239 ~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-sgs~Dg~I~iWd~~~~~ 317 (531)
.|.+..++ .+|+.+. ...|+..+....... .+......+..|+|++.+..|+ +-...+.|..+++....
T Consensus 37 ~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~--------~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 37 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYT--------LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp CEEESSSC-CEEEEEC-BSCEEEECTTSCCEE--------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cccccccC-ceeEeec-ccceEEEeCCCCeeE--------EeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 34444443 3344333 345766666533211 1222334578999997655554 44567889989887654
Q ss_pred cccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE-eecCCCCeeEEEE
Q 009614 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLSW 396 (531)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~I~~l~~ 396 (531)
....+......+..+.+.+... .++..+. ....+.+.+... ..... +.........|++
T Consensus 107 ~~~~~~~~~~~p~glavd~~~g-~ly~~d~--------------~~~~I~~~~~dG-----~~~~~l~~~~l~~P~~iav 166 (349)
T 3v64_C 107 VEEVVSTGLESPGGLAVDWVHD-KLYWTDS--------------GTSRIEVANLDG-----AHRKVLLWQSLEKPRAIAL 166 (349)
T ss_dssp CEEEECSSCSCCCEEEEETTTT-EEEEEET--------------TTTEEEEEETTS-----CSCEEEECTTCSCEEEEEE
T ss_pred ceEEEeCCCCCccEEEEecCCC-eEEEEcC--------------CCCeEEEEcCCC-----CceEEEEeCCCCCcceEEE
Confidence 3222222222233333322211 1111111 112232222211 11111 2223345789999
Q ss_pred cCCC--eEEEEeCC-CcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE-ecCCCC
Q 009614 397 SKNG--FLLSSSAD-KTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDIRE 471 (531)
Q Consensus 397 sp~~--~l~s~s~D-g~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~-~~~~~~ 471 (531)
.|.+ ++++-... +.|..+++.......... .-...+.|+++|..+.++++-...+.|..+|+....... ......
T Consensus 167 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~ 246 (349)
T 3v64_C 167 HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP 246 (349)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred ecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCC
Confidence 9854 44454445 788888886543333222 334578999998445555555667889999987643322 222344
Q ss_pred ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
....+++ ..+.++++-...+.|..++..+|+....+.
T Consensus 247 ~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 247 HPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp SEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 5677888 455555666667889999876776655443
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.61 E-value=0.0092 Score=65.70 Aligned_cols=243 Identities=7% Similarity=0.008 Sum_probs=116.8
Q ss_pred ccceeee-CCCCeEEeeec-----CCeEEEEeCCCC-cccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC-----
Q 009614 238 HGSATLK-PGDHELTLGQR-----MRRVRVHPVKKQ-SRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED----- 305 (531)
Q Consensus 238 ~~s~~fs-pdg~~lasgs~-----dg~I~vwd~~~~-~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D----- 305 (531)
+...+|+ |||++||-+.. ..+|+++++.++ .. +.. .+.. ....+.|+|||+.|+....|
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~-----~~~~---~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IAD-----KVSG---TNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CCC-----CEEE---ECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CCc-----cccC---ceeeEEEecCCCEEEEEEECCCCCC
Confidence 3457899 99999885433 235999999876 42 110 1111 13467899999988777665
Q ss_pred CcEEEEEcccCccccc--eecCCCC-CeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcc-e
Q 009614 306 GTVRVWKVIEHERLDG--FDVQDTD-PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP-L 381 (531)
Q Consensus 306 g~I~iWd~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 381 (531)
..|.++++.++..... +...... .....++++....++... ......+++++..... ..+ +
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~-------------~~~~~~l~~~d~~~~~--~~~~~ 311 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ-------------SPETAEVHLLDLRKGN--AHNTL 311 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE-------------CSSCEEEEEEESSSCT--TCCCE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec-------------CCCCceEEEEECCCCC--CCcee
Confidence 2577788876643211 1111111 112223333222111111 1123344444443210 011 0
Q ss_pred eEe-ecCCCCeeEEEEcCCCe-EEEEeCC----CcEEEEECCC-CeEEE-EeecCCceEEEEEeeCCCCEEEEEeCCCe-
Q 009614 382 HEF-QGHSSEVLDLSWSKNGF-LLSSSAD----KTVRLWQVGI-DRCLR-VFSHNNYVTSVAFNPVDDNYFISGSIDGK- 452 (531)
Q Consensus 382 ~~~-~~h~~~I~~l~~sp~~~-l~s~s~D----g~V~lwdl~~-~~~l~-~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~- 452 (531)
..+ .........+.|+..+. ++.+..+ ..|..+++.+ +.... .+.+...+.--.+.+..+.++++...++.
T Consensus 312 ~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~ 391 (751)
T 2xe4_A 312 EIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLT 391 (751)
T ss_dssp EESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEE
T ss_pred EEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEE
Confidence 222 22344555666655554 4444433 3567777765 33333 44444433222344423455666677775
Q ss_pred -EEEEeC-------CCCe-EEEecC-CCCceEEEEE----ccCCCEE-EEEeCC---CcEEEEeCCCCeE
Q 009614 453 -VRIWEV-------RRCQ-VVDYTD-IREIVSAVCY----CPDGKGG-IVGTMT---GNCRFYDIKDNQL 504 (531)
Q Consensus 453 -I~Iwd~-------~~~~-~~~~~~-~~~~v~~v~~----spdg~~l-~sgs~d---g~I~iwd~~~~~l 504 (531)
|.++++ .+++ ...+.- ....+..+.+ ++++..+ ++.+.. +.+..+|+.+++.
T Consensus 392 ~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 392 RIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp EEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred EEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 555565 3444 333211 1122333333 3466544 444332 3578888877654
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.51 E-value=0.07 Score=58.80 Aligned_cols=246 Identities=10% Similarity=0.011 Sum_probs=131.9
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCccccccc-------ccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEE
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSL-------YTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~-------~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~ 309 (531)
.+.++...++|. +..|+..+-|.+++........... .......-....|.+|...++|. |..|+.++-|.
T Consensus 259 ~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~ 336 (781)
T 3v9f_A 259 YIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGIN 336 (781)
T ss_dssp CEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEE
T ss_pred eEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEE
Confidence 344556666665 4455554557778776443211100 00000011345799999998886 56677667788
Q ss_pred EEEcccCccccceecC------C--CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcce
Q 009614 310 VWKVIEHERLDGFDVQ------D--TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL 381 (531)
Q Consensus 310 iWd~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (531)
.++..+.... .+... . .......+..+..+.+.. ++..+-+..++........- .
T Consensus 337 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi---------------gt~~~Gl~~~~~~~~~~~~~-~ 399 (781)
T 3v9f_A 337 FISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCDDGQGKLWI---------------GTDGGGINVFENGKRVAIYN-K 399 (781)
T ss_dssp EECSSCCSCE-EEC----CCCSSCCSSSCEEEEEECTTSCEEE---------------EEBSSCEEEEETTEEEEECC--
T ss_pred EeCCCCCcce-eeccCccccccCCCCCcceEEEEEcCCCCEEE---------------EeCCCcEEEEECCCCeEEEc-c
Confidence 8887654321 11100 0 001111111122122211 11112233333322111000 0
Q ss_pred eEeecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee---cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeC
Q 009614 382 HEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEV 458 (531)
Q Consensus 382 ~~~~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~---h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~ 458 (531)
.........|.++...+++.|..|+.++-|..+|..+++...... ....|.++...+ ++.+ ..|+. +-|..||.
T Consensus 400 ~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~l-wigt~-~Gl~~~~~ 476 (781)
T 3v9f_A 400 ENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKI-WIGTH-AGVFVIDL 476 (781)
T ss_dssp ----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEE-EEEET-TEEEEEES
T ss_pred CCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCE-EEEEC-CceEEEeC
Confidence 000123467899988888877778887779999988776543321 346789998877 5654 44555 56999998
Q ss_pred CCCeEEEecCC------CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 459 RRCQVVDYTDI------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 459 ~~~~~~~~~~~------~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
.+++...+... ...|.+++..++|.+ .+|+..+-+..||..+++..
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~ 528 (781)
T 3v9f_A 477 ASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-WIGTFGGGVGIYTPDMQLVR 528 (781)
T ss_dssp SSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-EEEESSSCEEEECTTCCEEE
T ss_pred CCCeEEecccCcccccccceeEEEEEcCCCCE-EEEEcCCCEEEEeCCCCeEE
Confidence 87665433221 357899999998875 44555344778998776543
No 265
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.49 E-value=0.0054 Score=66.53 Aligned_cols=201 Identities=11% Similarity=0.074 Sum_probs=121.0
Q ss_pred CCeEEeeecCCeEEEEeCCCCcccccccccceEEc---ccC-CCE-EEEEEccCCCEEEEEeCCCcEEEEEcccCccccc
Q 009614 247 DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL---AHE-GSI-LTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDG 321 (531)
Q Consensus 247 g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~---~H~-~~I-~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~ 321 (531)
+..+.+++.++.|..+|..+++.....-... ... .+. ..+ ..+.+ .+..++.++.|+.|..+|..+|+.+..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEV-AKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCC-CGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCC-CccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 4566667778889888887766543211000 000 000 001 11222 355788888999999999999986554
Q ss_pred eecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCCe
Q 009614 322 FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGF 401 (531)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~~ 401 (531)
+....... . ......++ + .++.
T Consensus 143 ~~~~~~~~-------------------------------------------~----------~~~~~~P~----v-~~~~ 164 (668)
T 1kv9_A 143 QQTTDPAK-------------------------------------------P----------YSITGAPR----V-VKGK 164 (668)
T ss_dssp EECSCTTS-------------------------------------------S----------CBCCSCCE----E-ETTE
T ss_pred eccCCCCC-------------------------------------------c----------ceecCCCE----E-ECCE
Confidence 43211000 0 00000111 0 1344
Q ss_pred EEEEe------CCCcEEEEECCCCeEEEEeecC--C------------------------------ceEEEEEeeCCCCE
Q 009614 402 LLSSS------ADKTVRLWQVGIDRCLRVFSHN--N------------------------------YVTSVAFNPVDDNY 443 (531)
Q Consensus 402 l~s~s------~Dg~V~lwdl~~~~~l~~~~h~--~------------------------------~V~sv~fsp~d~~~ 443 (531)
++.+. .++.|..+|..+++.+..+... . ....++++| ...+
T Consensus 165 v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~ 243 (668)
T 1kv9_A 165 VIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDL 243 (668)
T ss_dssp EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTE
T ss_pred EEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCE
Confidence 44443 2588999999999998877421 0 012468888 7778
Q ss_pred EEEEeCCCe-------------------EEEEeCCCCeEEE-ec--CCC-------CceEEEEEccCCC---EEEEEeCC
Q 009614 444 FISGSIDGK-------------------VRIWEVRRCQVVD-YT--DIR-------EIVSAVCYCPDGK---GGIVGTMT 491 (531)
Q Consensus 444 l~sgs~Dg~-------------------I~Iwd~~~~~~~~-~~--~~~-------~~v~~v~~spdg~---~l~sgs~d 491 (531)
++.++.++. |..+|..+++.+- +. .|. .++....+..+|+ .|++++.+
T Consensus 244 vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~ 323 (668)
T 1kv9_A 244 LYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKN 323 (668)
T ss_dssp EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTT
T ss_pred EEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCC
Confidence 888877763 9999999998872 22 122 2333333445775 68899999
Q ss_pred CcEEEEeCCCCeEEEEee
Q 009614 492 GNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 492 g~I~iwd~~~~~l~~~~~ 509 (531)
|.++++|..+|+++...+
T Consensus 324 G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 324 GFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp SEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEecccc
Confidence 999999999999986544
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.44 E-value=0.0037 Score=66.65 Aligned_cols=80 Identities=9% Similarity=0.080 Sum_probs=55.0
Q ss_pred CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCce--EEEEEccCCCE
Q 009614 407 ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIV--SAVCYCPDGKG 484 (531)
Q Consensus 407 ~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v--~~v~~spdg~~ 484 (531)
.++.|..||+.+++.+..+.+..++..-.... .+.+++.|+.||.++.||.++++++-.......+ .-+.|..+|+.
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 36889999999999987776444443322333 5677888999999999999999988432222222 23667778864
Q ss_pred EEE
Q 009614 485 GIV 487 (531)
Q Consensus 485 l~s 487 (531)
.++
T Consensus 543 Yv~ 545 (582)
T 1flg_A 543 YLG 545 (582)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.38 E-value=0.13 Score=56.65 Aligned_cols=240 Identities=11% Similarity=0.051 Sum_probs=131.7
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceE--EcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQE--FLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~--l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~ 314 (531)
.+.++...++|.+.+ |+.. -+.+|+..+.... ....... ..-....|.+|...++|. |..|+..+-|.+++..
T Consensus 212 ~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 212 DVRCIYKDTNGNIWI-GTSK-GLALFNANTETFT--NFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp SEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE--C-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred ceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEE--EEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 345566677776554 4444 5888887643321 1110000 011245799999988886 5556664558888887
Q ss_pred cCcccccee-------cCC-----CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCccee
Q 009614 315 EHERLDGFD-------VQD-----TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (531)
Q Consensus 315 ~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (531)
++....... ... .......+..+..+.+.. ++..+-+..++..... ..
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi---------------gt~~~Gl~~~~~~~~~-----~~ 346 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI---------------GTWGGGINFISNAPPT-----FH 346 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE---------------EEBSSCEEEECSSCCS-----CE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE---------------EecCCeEEEeCCCCCc-----ce
Confidence 654321110 000 000111111222222111 1112223333332111 11
Q ss_pred Ee----------ecCCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEe----ecCCceEEEEEeeCCCCEEEEEe
Q 009614 383 EF----------QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVF----SHNNYVTSVAFNPVDDNYFISGS 448 (531)
Q Consensus 383 ~~----------~~h~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~----~h~~~V~sv~fsp~d~~~l~sgs 448 (531)
.+ ......|.++...++|.|..|+.++-|..||..++...... .....|.++...+ ++.+. .|+
T Consensus 347 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lW-igt 424 (781)
T 3v9f_A 347 TWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLW-FGT 424 (781)
T ss_dssp EEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSCEE-EEE
T ss_pred eeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCCEE-EEe
Confidence 11 11235689999888888888887777899998765432211 1346789998876 66554 467
Q ss_pred CCCeEEEEeCCCCeEEEecC---CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 449 IDGKVRIWEVRRCQVVDYTD---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 449 ~Dg~I~Iwd~~~~~~~~~~~---~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
.++-|..+|..+++...+.. ....|.++...++|. |.+|+. +-|..||..+++..
T Consensus 425 ~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 425 YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVI 482 (781)
T ss_dssp TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCC
T ss_pred ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEE
Confidence 77789999998887765432 346789999888886 455555 55889998876653
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.38 E-value=0.059 Score=50.59 Aligned_cols=187 Identities=10% Similarity=0.111 Sum_probs=109.7
Q ss_pred EEcccCCCEEEEEEccCCCEEEE-EeCCCcEEEEEcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccc
Q 009614 279 EFLAHEGSILTMKFSLDGQYLAS-GGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKS 357 (531)
Q Consensus 279 ~l~~H~~~I~~l~fspdg~~Las-gs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (531)
.+.+-.+.+..|+|+|++..|++ ...++.|...|.. ++....+..
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l--------------------------------- 66 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL--------------------------------- 66 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC---------------------------------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec---------------------------------
Confidence 34555678999999998765554 6667788877775 443332211
Q ss_pred cccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeE---EEEee-------
Q 009614 358 LRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRC---LRVFS------- 426 (531)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~---l~~~~------- 426 (531)
. -....-.|++.+++ ++++.-.++.+.++++..... +....
T Consensus 67 ---------------------------~-g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~ 118 (255)
T 3qqz_A 67 ---------------------------D-FVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESP 118 (255)
T ss_dssp ---------------------------S-SCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCC
T ss_pred ---------------------------C-CCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeecccccccc
Confidence 1 11346677787777 545555667888888765432 22221
Q ss_pred cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC------CeEEEe-----cCCCCceEEEEEccCC-CEEEEEeCCCcE
Q 009614 427 HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR------CQVVDY-----TDIREIVSAVCYCPDG-KGGIVGTMTGNC 494 (531)
Q Consensus 427 h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~------~~~~~~-----~~~~~~v~~v~~spdg-~~l~sgs~dg~I 494 (531)
.+.....|+|+| .++.|+++.......||.+.. -++... ......+.+++++|.. .+++.......+
T Consensus 119 ~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L 197 (255)
T 3qqz_A 119 TNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRAL 197 (255)
T ss_dssp CSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeE
Confidence 344568999999 665555555544444444431 122211 1123357899999954 555666667789
Q ss_pred EEEeCCCCeEEEEeeeeeccc--ccCCCceeeeEEEee
Q 009614 495 RFYDIKDNQLYQQNQICLQGK--KKLPGKRITGFQVVK 530 (531)
Q Consensus 495 ~iwd~~~~~l~~~~~~~~~~~--kk~~~~~It~l~f~p 530 (531)
.++|.. ++++....+.. +. .......-.||+|.|
T Consensus 198 ~~~d~~-g~~~~~~~L~~-g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 198 QEVTLV-GEVIGEMSLTK-GSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp EEECTT-CCEEEEEECST-TGGGCSSCCCSEEEEEECT
T ss_pred EEEcCC-CCEEEEEEcCC-ccCCcccccCCCCeeEECC
Confidence 999977 55666555431 11 011234557777754
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.36 E-value=0.005 Score=62.99 Aligned_cols=112 Identities=8% Similarity=0.124 Sum_probs=71.0
Q ss_pred CCeeEEEEcCCC-eEEEEeC-CC----cEEEEECCCCeEE--EEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC
Q 009614 389 SEVLDLSWSKNG-FLLSSSA-DK----TVRLWQVGIDRCL--RVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (531)
Q Consensus 389 ~~I~~l~~sp~~-~l~s~s~-Dg----~V~lwdl~~~~~l--~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~ 460 (531)
.....|++++++ +|+.+.. .+ .+.+++.. +... ..+........++++|.++.++++-..++.|..++..+
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~ 257 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTT 257 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence 456788898888 4555553 11 23334432 2111 22222334567889995666677766788999999988
Q ss_pred CeEEEe--cCCCCceEEEEEccCCCEEEE-EeCCCcEEEEeCCC
Q 009614 461 CQVVDY--TDIREIVSAVCYCPDGKGGIV-GTMTGNCRFYDIKD 501 (531)
Q Consensus 461 ~~~~~~--~~~~~~v~~v~~spdg~~l~s-gs~dg~I~iwd~~~ 501 (531)
+....+ .........++|+|+|++|++ -...+.|..++...
T Consensus 258 ~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 258 QETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 765322 222345789999999995554 45577899987653
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.29 E-value=0.0026 Score=70.10 Aligned_cols=108 Identities=12% Similarity=0.084 Sum_probs=66.3
Q ss_pred eEEEEcCCC-eEEEEeCC-----CcEEEEECCCCeE--EEEee--cCCceEEEEEeeCCCCEEEEEeC---CCeEEEEeC
Q 009614 392 LDLSWSKNG-FLLSSSAD-----KTVRLWQVGIDRC--LRVFS--HNNYVTSVAFNPVDDNYFISGSI---DGKVRIWEV 458 (531)
Q Consensus 392 ~~l~~sp~~-~l~s~s~D-----g~V~lwdl~~~~~--l~~~~--h~~~V~sv~fsp~d~~~l~sgs~---Dg~I~Iwd~ 458 (531)
..++|+|++ .|+....| ..|.++++.+++. ...+. .......+.|+| |+++|+..+. ...|+++|+
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEES
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEEC
Confidence 467899998 55555544 3588889887642 23332 344567899999 8998876653 346888999
Q ss_pred CCC--eE--EEec-CCCCceEEEEEccCCCEEEEEe-CC--C--cEEEEeCCC
Q 009614 459 RRC--QV--VDYT-DIREIVSAVCYCPDGKGGIVGT-MT--G--NCRFYDIKD 501 (531)
Q Consensus 459 ~~~--~~--~~~~-~~~~~v~~v~~spdg~~l~sgs-~d--g--~I~iwd~~~ 501 (531)
.++ +. ..+. ........+.|+. |..|+..+ .+ + .|..+++.+
T Consensus 303 ~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 303 RKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp SSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 875 33 3332 2334455555544 55554443 33 2 566677764
No 271
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.29 E-value=0.019 Score=55.79 Aligned_cols=110 Identities=11% Similarity=0.096 Sum_probs=81.0
Q ss_pred eeEEEE---cCCC-eEEEEe-------------CCCcEEEEECC---CCeEEEEeec-------------C-CceEEEEE
Q 009614 391 VLDLSW---SKNG-FLLSSS-------------ADKTVRLWQVG---IDRCLRVFSH-------------N-NYVTSVAF 436 (531)
Q Consensus 391 I~~l~~---sp~~-~l~s~s-------------~Dg~V~lwdl~---~~~~l~~~~h-------------~-~~V~sv~f 436 (531)
+..|.| .|++ ++++.. .+..|..||+. +++.+....- . .....|+.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 367888 5777 444332 26779999999 7877665541 1 24789999
Q ss_pred eeCCCCEEEEEeCC-CeEEEEeCCCCeEEEec------CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 437 NPVDDNYFISGSID-GKVRIWEVRRCQVVDYT------DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 437 sp~d~~~l~sgs~D-g~I~Iwd~~~~~~~~~~------~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
.+ +++..++++.- +.|...+........+. ......+.|+++|+|+.|++....|.+..+|+..
T Consensus 145 D~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 145 DR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 99 99999999988 88888888765444321 1122467999999999999987799999999874
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.28 E-value=0.083 Score=53.81 Aligned_cols=199 Identities=9% Similarity=0.041 Sum_probs=113.3
Q ss_pred cccceeeeC-CCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCC-Cc---EEEE
Q 009614 237 RHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED-GT---VRVW 311 (531)
Q Consensus 237 ~~~s~~fsp-dg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~D-g~---I~iW 311 (531)
....++++| ++..|.+....+.|+.++....... .+.........|+|+++|++|+.+... +. ..+|
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~--------~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS--------TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE--------EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE--------EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 445689998 4555655554488888888753321 122234568899999999966665542 21 1122
Q ss_pred EcccCccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCe
Q 009614 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (531)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I 391 (531)
-...+.... ...+. .....
T Consensus 210 ~~~~g~~~~------------------------------------------------------------~~~l~-~~~~p 228 (430)
T 3tc9_A 210 LTRESGFKV------------------------------------------------------------ITELT-KGQNC 228 (430)
T ss_dssp EEGGGTSCS------------------------------------------------------------EEEEE-ECSSC
T ss_pred EeCCCceee------------------------------------------------------------eeeec-cCCCc
Confidence 111111000 00000 11235
Q ss_pred eEEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCC-EEEEEeCCCeEEEEeCCC--CeE-
Q 009614 392 LDLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRR--CQV- 463 (531)
Q Consensus 392 ~~l~~sp-~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~-~l~sgs~Dg~I~Iwd~~~--~~~- 463 (531)
..++++| ++ ++++-...+.|..++..++.....+. .......|+|+| +++ ++++-...+.|..++... ++.
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p-dG~~lyv~d~~~~~I~~~~~d~~~~~~~ 307 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP-SGNYAYIVVVNQHYILRSDYDWKTKRLT 307 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEC
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC-CCCEEEEEECCCCEEEEEeCCccccccc
Confidence 6788999 66 45555567889999998776533333 224578899999 888 455556678999987653 222
Q ss_pred --EEecCC---------------CCceE-EEEEc--------cCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 464 --VDYTDI---------------REIVS-AVCYC--------PDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 464 --~~~~~~---------------~~~v~-~v~~s--------pdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
..+.+. -.... .++.. ++|.++++=...+.|+.++ .++++..
T Consensus 308 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~ 375 (430)
T 3tc9_A 308 TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTT 375 (430)
T ss_dssp CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEE
T ss_pred ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEE
Confidence 111111 01123 45553 3466666656677899888 4565443
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.25 E-value=0.12 Score=50.35 Aligned_cols=202 Identities=5% Similarity=-0.053 Sum_probs=117.2
Q ss_pred cceeeeCCCC-eEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCC-CEEEEEeCCCcEEEEEcccC
Q 009614 239 GSATLKPGDH-ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDG-QYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 239 ~s~~fspdg~-~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg-~~Lasgs~Dg~I~iWd~~~~ 316 (531)
..+.|++.+. +..+-...+.|..++........ ..+...-.....+++.+.+ +++++-...+.|.++++...
T Consensus 38 ~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~------~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 38 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ------NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC------EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE------EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 3578888544 44555567889888877542110 0122222356678888744 44455455677877776432
Q ss_pred ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEE
Q 009614 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (531)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~ 396 (531)
.. ..+ +.........|++
T Consensus 112 ~~-~~l-------------------------------------------------------------~~~~~~~P~giav 129 (318)
T 3sov_A 112 LR-KVL-------------------------------------------------------------FWQELDQPRAIAL 129 (318)
T ss_dssp SC-EEE-------------------------------------------------------------ECSSCSSEEEEEE
T ss_pred cE-EEE-------------------------------------------------------------EeCCCCCccEEEE
Confidence 11 000 0111234567888
Q ss_pred cCC-CeEEEEe--CCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe-cCCCC
Q 009614 397 SKN-GFLLSSS--ADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY-TDIRE 471 (531)
Q Consensus 397 sp~-~~l~s~s--~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~-~~~~~ 471 (531)
.|. +.|+.+. ..+.|...++.......... .-...+.|+++|..+.++++-+..+.|..+|+.......+ .....
T Consensus 130 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~ 209 (318)
T 3sov_A 130 DPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP 209 (318)
T ss_dssp EGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCS
T ss_pred eCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCC
Confidence 875 4444444 35778888876443322222 2345689999994444555556678999999875433222 22344
Q ss_pred ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
....+++. .+.++++-...+.|..++..+++....+.
T Consensus 210 ~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 210 HPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 56777775 33455555567889999998887655443
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.22 E-value=0.15 Score=52.02 Aligned_cols=108 Identities=9% Similarity=0.087 Sum_probs=68.6
Q ss_pred eeEEEEcCCC-eEE-EEeCCCcEEEEECC--CCeE--EEEee-c---------------CCceEEEEE---------eeC
Q 009614 391 VLDLSWSKNG-FLL-SSSADKTVRLWQVG--IDRC--LRVFS-H---------------NNYVTSVAF---------NPV 439 (531)
Q Consensus 391 I~~l~~sp~~-~l~-s~s~Dg~V~lwdl~--~~~~--l~~~~-h---------------~~~V~sv~f---------sp~ 439 (531)
-..|+++|++ .|+ +-...+.|+.++.. ++.. ...+. . -.....|++ .+
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~- 353 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED- 353 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC-
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC-
Confidence 3469999998 454 44567889998865 2321 11111 1 123577899 55
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEecCCC------------------CceEEEEEc-cCCCEEEEEeCCCcEEEEeCC
Q 009614 440 DDNYFISGSIDGKVRIWEVRRCQVVDYTDIR------------------EIVSAVCYC-PDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 440 d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~------------------~~v~~v~~s-pdg~~l~sgs~dg~I~iwd~~ 500 (531)
+++++++-...+.|+.++. ++.+..+.+.. .....|++. ++|.++++=...+.|+.++++
T Consensus 354 ~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 354 EYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7777777777889999985 56655443221 236788888 566655555556777777654
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.20 E-value=0.23 Score=49.98 Aligned_cols=226 Identities=8% Similarity=-0.030 Sum_probs=121.3
Q ss_pred cCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEE-eCCCcEEEEEcccCc----cccceecCCCCC
Q 009614 255 RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASG-GEDGTVRVWKVIEHE----RLDGFDVQDTDP 329 (531)
Q Consensus 255 ~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasg-s~Dg~I~iWd~~~~~----~~~~~~~~~~~~ 329 (531)
....|+..++...... .+......+..|+|++.+..|+-+ ...+.|+.+++.... ....+......+
T Consensus 90 ~~~~I~~i~l~~~~~~--------~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYT--------SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp ETTEEEEECTTSCSCE--------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ccceeEEEccCCccee--------EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 3467888887643321 122345678899999865555444 457888888876522 111111111122
Q ss_pred eeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE-eecCCCCeeEEEEcCCC-eEEEEe-
Q 009614 330 SCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLSWSKNG-FLLSSS- 406 (531)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~I~~l~~sp~~-~l~s~s- 406 (531)
..+.+.+.. ..++..+ .....+.+.+... ..... +.........|++.|.+ .|+.+.
T Consensus 162 ~glavD~~~-~~lY~~d--------------~~~~~I~~~~~~g-----~~~~~l~~~~~~~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 162 DGLAVDWIH-SNIYWTD--------------SVLGTVSVADTKG-----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp EEEEEETTT-TEEEEEE--------------TTTTEEEEECTTT-----CSEEEEEECSSCCEEEEEEETTTTEEEEEEC
T ss_pred ccEEEEecC-CceEEEE--------------CCCCeEEEEeCCC-----CceEEEEeCCCCCcceEEEecccCeEEEEeC
Confidence 222222111 1111111 1222333333321 11111 22234457899999855 444443
Q ss_pred C-CCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec---CCCCceEEEEEccC
Q 009614 407 A-DKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT---DIREIVSAVCYCPD 481 (531)
Q Consensus 407 ~-Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~---~~~~~v~~v~~spd 481 (531)
. .+.|...++.......... .-...+.|+++|..+.++++-...+.|..+|+.......+. ..-.....|++ ..
T Consensus 222 ~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~ 300 (400)
T 3p5b_L 222 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FE 300 (400)
T ss_dssp SSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ET
T ss_pred CCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eC
Confidence 2 4788888887554433333 23567899999844444555556789999998765433221 12334567777 34
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 482 GKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 482 g~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
+.++++-...+.|..+|..+|+.+..+.
T Consensus 301 ~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 301 DKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 4555666667889999977776655543
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.14 E-value=0.21 Score=48.34 Aligned_cols=223 Identities=9% Similarity=-0.005 Sum_probs=118.7
Q ss_pred CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEE-EEEeCCCcEEEEEcccC---ccccc-eecCCCCCee
Q 009614 257 RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEH---ERLDG-FDVQDTDPSC 331 (531)
Q Consensus 257 g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-asgs~Dg~I~iWd~~~~---~~~~~-~~~~~~~~~~ 331 (531)
..|+..++...... .+...-..+.+++|++.+..| ++-..++.|..+++... ..... +......+..
T Consensus 10 ~~I~~i~~~~~~~~--------~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT--------SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEEETTSCCCE--------EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCcceE--------ehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 45788887753321 122234567899999866555 44455788999988651 11111 1111122333
Q ss_pred EEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeE-eecCCCCeeEEEEcCCC-eEEEEeC-C
Q 009614 332 LYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLSWSKNG-FLLSSSA-D 408 (531)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~I~~l~~sp~~-~l~s~s~-D 408 (531)
+.+.+.. ..++..+ .....+.+++... ..... +.........+++.|.+ .|+.+.. .
T Consensus 82 lavd~~~-~~ly~~d--------------~~~~~I~~~~~~g-----~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~ 141 (316)
T 1ijq_A 82 LAVDWIH-SNIYWTD--------------SVLGTVSVADTKG-----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 141 (316)
T ss_dssp EEEETTT-TEEEEEE--------------TTTTEEEEEETTS-----SSEEEEEECTTCCEEEEEEETTTTEEEEEECSS
T ss_pred EEEeecC-CeEEEEE--------------CCCCEEEEEeCCC-----CceEEEEECCCCCcceEEeCCCCCEEEEEccCC
Confidence 3332211 1122111 1122333332221 11111 12233467899999855 4444443 3
Q ss_pred -CcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEec---CCCCceEEEEEccCCC
Q 009614 409 -KTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT---DIREIVSAVCYCPDGK 483 (531)
Q Consensus 409 -g~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~---~~~~~v~~v~~spdg~ 483 (531)
+.|...++.......... .-.....|+++|..+.++++-+..+.|..+|+.......+. ..-.....+++. .+.
T Consensus 142 ~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ 220 (316)
T 1ijq_A 142 PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDK 220 (316)
T ss_dssp SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTE
T ss_pred CCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCE
Confidence 678888886443322222 33567899999834445555556789999999754332221 223446778874 455
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEEe
Q 009614 484 GGIVGTMTGNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 484 ~l~sgs~dg~I~iwd~~~~~l~~~~ 508 (531)
++++-...+.|..++..+++.+..+
T Consensus 221 ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 221 VFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEECCCCeEEEEeCCCCcceEEE
Confidence 5666666788999998777765544
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.12 E-value=0.022 Score=60.70 Aligned_cols=102 Identities=14% Similarity=0.009 Sum_probs=71.8
Q ss_pred CCCcEEEEECCCCeEEEEeecCCce---------------------------------------EEEEEeeCCCCEEEEE
Q 009614 407 ADKTVRLWQVGIDRCLRVFSHNNYV---------------------------------------TSVAFNPVDDNYFISG 447 (531)
Q Consensus 407 ~Dg~V~lwdl~~~~~l~~~~h~~~V---------------------------------------~sv~fsp~d~~~l~sg 447 (531)
.++.|+.+|..+++.+..+...... ..+++.+ ...+++.+
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g 258 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFG 258 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEe
Confidence 3789999999999998877532211 1356777 66777777
Q ss_pred eCC----------------CeEEEEeCCCCeEEE---ecCCC--------CceEEEEEc-cCC---CEEEEEeCCCcEEE
Q 009614 448 SID----------------GKVRIWEVRRCQVVD---YTDIR--------EIVSAVCYC-PDG---KGGIVGTMTGNCRF 496 (531)
Q Consensus 448 s~D----------------g~I~Iwd~~~~~~~~---~~~~~--------~~v~~v~~s-pdg---~~l~sgs~dg~I~i 496 (531)
..+ +.|..+|..+++++- ...|. .++. +... .+| ..++.++.+|.+++
T Consensus 259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~ 337 (599)
T 1w6s_A 259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYT 337 (599)
T ss_dssp CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEE
T ss_pred CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEE
Confidence 665 389999999998872 22221 1222 2232 567 56778999999999
Q ss_pred EeCCCCeEEEEeee
Q 009614 497 YDIKDNQLYQQNQI 510 (531)
Q Consensus 497 wd~~~~~l~~~~~~ 510 (531)
+|..+|+++...+.
T Consensus 338 lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 338 LDRTDGALVSANKL 351 (599)
T ss_dssp EETTTCCEEEEEES
T ss_pred EECCCCCEeecccc
Confidence 99999999987653
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.09 E-value=0.017 Score=61.42 Aligned_cols=80 Identities=10% Similarity=0.032 Sum_probs=55.4
Q ss_pred CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCc--eEEEEEccCCCE
Q 009614 407 ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREI--VSAVCYCPDGKG 484 (531)
Q Consensus 407 ~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~--v~~v~~spdg~~ 484 (531)
.++.|..||+.+++.+..+.+...+.+..+.. .+.+++.++.||.|+.||..+++++-....... ...+.|..+|+.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 45889999999999988887555554444444 567778899999999999999998842222221 223446678865
Q ss_pred EEE
Q 009614 485 GIV 487 (531)
Q Consensus 485 l~s 487 (531)
++.
T Consensus 521 yv~ 523 (571)
T 2ad6_A 521 YIG 523 (571)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.02 E-value=0.097 Score=50.34 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=65.8
Q ss_pred CeeEEEEcCCC-eEEEEeC-CC-cEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe--
Q 009614 390 EVLDLSWSKNG-FLLSSSA-DK-TVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ-- 462 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~-Dg-~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~-- 462 (531)
.+..|++.+++ ++++... ++ .|..+|..+++...... .......++..+ ++..+++...++.|.++|..+++
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEe
Confidence 46788899988 4444333 22 46677777777544333 223345555555 55555555568899999987653
Q ss_pred EEEec---------CCCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCC
Q 009614 463 VVDYT---------DIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKD 501 (531)
Q Consensus 463 ~~~~~---------~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~ 501 (531)
+.... ..-.....| +|+++.|+++. ..+.|..|++..
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 32111 111234555 88887665554 567899999874
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.96 E-value=0.091 Score=51.04 Aligned_cols=110 Identities=8% Similarity=0.061 Sum_probs=69.4
Q ss_pred CeeEEEEcCCC-eEEEEeCC-CcEEEEECCCCeEEEEee-------cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC
Q 009614 390 EVLDLSWSKNG-FLLSSSAD-KTVRLWQVGIDRCLRVFS-------HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~D-g~V~lwdl~~~~~l~~~~-------h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~ 460 (531)
...+|+..++| ..++++.- +.|...+.... .+..+. .....+.|+++| +++.|++....|.+..+|+.+
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCC
Confidence 47788999988 66667766 77666666544 233221 112367999999 898888887799999999885
Q ss_pred CeE--EEec--CC---CCceEEE-EEccCCCE-EEEEeCCCcEEEEeCCC
Q 009614 461 CQV--VDYT--DI---REIVSAV-CYCPDGKG-GIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 461 ~~~--~~~~--~~---~~~v~~v-~~spdg~~-l~sgs~dg~I~iwd~~~ 501 (531)
... +... +. -.....| .--.+|+. |++....+.+.+.+...
T Consensus 216 pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 216 PYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp SSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred CcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 433 3322 21 1233443 33457877 45555566666666544
No 281
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.93 E-value=0.34 Score=47.75 Aligned_cols=243 Identities=15% Similarity=0.096 Sum_probs=116.5
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC---CCEEEEEeC-C-----Cc
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD---GQYLASGGE-D-----GT 307 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd---g~~Lasgs~-D-----g~ 307 (531)
....++|.|+|.++++ ...|.|++++ ......+.... .+.........|+|+|+ +..|+.+.. . +.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~---v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELS---VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecce---EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3446899999986555 5669999998 32111111000 11122457899999998 555554433 2 56
Q ss_pred EEEEEcccCcc------ccceec---CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccC
Q 009614 308 VRVWKVIEHER------LDGFDV---QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (531)
Q Consensus 308 I~iWd~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (531)
|..|+...+.. +..+.. .......+.+.++. .++....+...... ..-.....+.++.+++...-...
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG--~Lyv~~G~~~~~~~-~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG--MLYVTTGEVYEREL-AQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS--CEEEECCCTTCGGG-GGCTTCSSSEEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC--CEEEEECCCCCCcc-ccCCCCCceEEEEEcCCCCCCCC
Confidence 77777654311 111210 01122334443332 23222211111000 00011223455555543210000
Q ss_pred ---------cceeEeecCCCCeeEEEEcC-CCeEEEEe-CCCcE------EEEECCCCe------------------EEE
Q 009614 379 ---------KPLHEFQGHSSEVLDLSWSK-NGFLLSSS-ADKTV------RLWQVGIDR------------------CLR 423 (531)
Q Consensus 379 ---------~~~~~~~~h~~~I~~l~~sp-~~~l~s~s-~Dg~V------~lwdl~~~~------------------~l~ 423 (531)
.......+| .....++|+| ++.|+++. ....+ .|.-+..+. ++.
T Consensus 184 npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp CTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred CcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeE
Confidence 001111222 3367889999 56444332 22221 222222221 223
Q ss_pred EeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe-------EEEecCCCCceEEEEEccCCCEEEEEeC
Q 009614 424 VFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ-------VVDYTDIREIVSAVCYCPDGKGGIVGTM 490 (531)
Q Consensus 424 ~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~-------~~~~~~~~~~v~~v~~spdg~~l~sgs~ 490 (531)
.+.+......++| . ++.++++.-..+.|...++.... ...+......+..+++.|||.++++...
T Consensus 263 ~~~~~~ap~G~~~-~-~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 263 FWPQGFPPGNLAF-F-RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp ECTTCCCEEEEEE-E-TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred ecCCCCCCcceEE-E-CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 3333345677888 3 67777776677788888776432 1223233457899999999987766543
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.88 E-value=0.049 Score=58.81 Aligned_cols=234 Identities=12% Similarity=0.046 Sum_probs=119.1
Q ss_pred eeeeCCCCeEEeee-cCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEe-CC-----CcEEEEEc
Q 009614 241 ATLKPGDHELTLGQ-RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG-ED-----GTVRVWKV 313 (531)
Q Consensus 241 ~~fspdg~~lasgs-~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs-~D-----g~I~iWd~ 313 (531)
+++.+++.+++.|+ .+..+.+||..+....... .+.... .-.++...++|++++.|+ .+ ..+.+||.
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~-----~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP-----DMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC-----CCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECC-----CCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 56778999999987 4568999998754332111 111111 113455667999999998 44 56899998
Q ss_pred ccCccccc-----eecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeec--
Q 009614 314 IEHERLDG-----FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-- 386 (531)
Q Consensus 314 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 386 (531)
.++.-... .......... .......++.+....+. .+.......+..|++...... .+......
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~---~~~~~~~iyv~Gg~~g~-----~~~~~~~~~v~~yd~~~~~w~-~~~~~~~~~~ 392 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQG---LYRSDNHAWLFGWKKGS-----VFQAGPSTAMNWYYTSGSGDV-KSAGKRQSNR 392 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTG---GGTTTCSCCEEECGGGC-----EEECCSSSEEEEEECSTTCEE-EEEEECEETT
T ss_pred CCCcceeCCCccccccccccccc---eeecCCceEEEECCCCc-----EEEecCccceeeeecCCccee-ecCCcccccc
Confidence 77653211 0000000000 00001111111111000 001111223444444321110 01111100
Q ss_pred ----CCCCeeEEEEcC-CC-eEEEEeCCC-----------cEEEEECCCCeEEEEe--e--cCCceEEEEEeeCCCCEEE
Q 009614 387 ----HSSEVLDLSWSK-NG-FLLSSSADK-----------TVRLWQVGIDRCLRVF--S--HNNYVTSVAFNPVDDNYFI 445 (531)
Q Consensus 387 ----h~~~I~~l~~sp-~~-~l~s~s~Dg-----------~V~lwdl~~~~~l~~~--~--h~~~V~sv~fsp~d~~~l~ 445 (531)
....-.++.+.. ++ +++.|+.++ .|.+||..+....... . ....-.+++..| ++++++
T Consensus 393 ~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~-~g~i~v 471 (656)
T 1k3i_A 393 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLP-DGSTFI 471 (656)
T ss_dssp EECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECT-TSCEEE
T ss_pred ccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECC-CCCEEE
Confidence 011123333333 45 666666432 6888898887766543 2 222224456667 889999
Q ss_pred EEeCC-----------CeEEEEeCCCCeEEEecC---CCCceEEEEEccCCCEEEEEeC
Q 009614 446 SGSID-----------GKVRIWEVRRCQVVDYTD---IREIVSAVCYCPDGKGGIVGTM 490 (531)
Q Consensus 446 sgs~D-----------g~I~Iwd~~~~~~~~~~~---~~~~v~~v~~spdg~~l~sgs~ 490 (531)
.|+.+ ..+.+||..+.+...... .........+.|||+.++.|+.
T Consensus 472 ~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 472 TGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 98864 468999998876554221 2223345667799999999985
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.87 E-value=0.76 Score=50.49 Aligned_cols=224 Identities=7% Similarity=-0.038 Sum_probs=117.3
Q ss_pred CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCC-EEEEEeCCCcEEEEEcccCc----cccceecCCCCCe
Q 009614 256 MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQ-YLASGGEDGTVRVWKVIEHE----RLDGFDVQDTDPS 330 (531)
Q Consensus 256 dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~-~Lasgs~Dg~I~iWd~~~~~----~~~~~~~~~~~~~ 330 (531)
...|+..++..... ..+......+.+|+|.+... ++++-...+.|+.+++.... ....+......+.
T Consensus 403 ~~~Ir~i~l~~~~~--------~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 403 RHEVRKMTLDRSEY--------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp BSSEEEECTTSCCC--------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccceeEeeccCCcc--------eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 34566666653221 12233456688999998554 44555566788888886431 1111111222233
Q ss_pred eEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEEEEcCCC-eEEEEe-C
Q 009614 331 CLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSKNG-FLLSSS-A 407 (531)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l~~sp~~-~l~s~s-~ 407 (531)
.+++.+... .++..+ .....+.+.+... .....+ .........|++.|.+ +|+.+. .
T Consensus 475 GLAvD~~~~-~LY~tD--------------~~~~~I~v~~ldG-----~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 475 GLAVDWIHS-NIYWTD--------------SVLGTVSVADTKG-----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp EEEEETTTT-EEEEEE--------------TTTTEEEEEETTS-----SSEEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred eeeeeecCC-cEEEEe--------------cCCCeEEEEeCCC-----CeEEEEEeCCCCCcceEEEecCCCCEEEecCC
Confidence 333322221 111111 2222333333221 112222 2234457899999974 554443 3
Q ss_pred -CCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecC---CCCceEEEEEccCC
Q 009614 408 -DKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD---IREIVSAVCYCPDG 482 (531)
Q Consensus 408 -Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~---~~~~v~~v~~spdg 482 (531)
.+.|...++........+. .-...+.|+++|..+.++++-.....|...++.......+.. .-....+|++.. +
T Consensus 535 ~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~ 613 (791)
T 3m0c_C 535 TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D 613 (791)
T ss_dssp SSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T
T ss_pred CCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-C
Confidence 3678888987655544443 335789999998455555555566789999997654433221 223445666632 3
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEe
Q 009614 483 KGGIVGTMTGNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 483 ~~l~sgs~dg~I~iwd~~~~~l~~~~ 508 (531)
.++++-...+.|...|..+|+.+..+
T Consensus 614 ~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 614 KVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEEECCCCEEEEEeCCCCcceEEe
Confidence 34444455677888887777655444
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.81 E-value=0.12 Score=50.49 Aligned_cols=108 Identities=9% Similarity=0.135 Sum_probs=65.7
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEee-----cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 388 ~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~-----h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
...+..+.+.+++.++..+.+|.+++.+...++.-..+. +...+.+|.+.| ++.+++++. +|.| .+....++
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL-LCSQDGGQ 280 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE-EEESSTTS
T ss_pred CCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeE-EEeCCCCc
Confidence 345677888888866666778887776533233222222 223588999988 677666654 6766 34444443
Q ss_pred EEE-ec---CCCCceEEEEEccCCCEEEEEeCCCcEEEEeC
Q 009614 463 VVD-YT---DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 463 ~~~-~~---~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~ 499 (531)
.-. .. .....++.+.|.+++. +++++.+|.|.-++-
T Consensus 281 tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 281 TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 222 11 2345678898876554 666677897776653
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.70 E-value=0.0087 Score=65.24 Aligned_cols=118 Identities=4% Similarity=-0.079 Sum_probs=69.7
Q ss_pred eeEEEEcCCC-eEEEEe-C-CCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEe
Q 009614 391 VLDLSWSKNG-FLLSSS-A-DKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY 466 (531)
Q Consensus 391 I~~l~~sp~~-~l~s~s-~-Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~ 466 (531)
...|++.|.+ +|+.+. . .+.|..+++.......... .-...+.|+|+|..+.++++-+..+.|.++++.......+
T Consensus 498 P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 498 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 577 (699)
T ss_dssp CCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE
T ss_pred cceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE
Confidence 3566777754 333332 2 2667777765433222222 2234678999994566666667778999999976433322
Q ss_pred cC---CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 009614 467 TD---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQ 509 (531)
Q Consensus 467 ~~---~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~ 509 (531)
.. .......|++..+ .++++....+.|..++..+++.+..+.
T Consensus 578 ~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 578 LEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 21 1223345555443 444555567889999998888776654
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.66 E-value=0.047 Score=55.70 Aligned_cols=112 Identities=10% Similarity=0.132 Sum_probs=65.9
Q ss_pred CCeeEEEEcCCCeEEEEeCC----Cc-EEEEECCCCeE-EEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 389 SEVLDLSWSKNGFLLSSSAD----KT-VRLWQVGIDRC-LRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 389 ~~I~~l~~sp~~~l~s~s~D----g~-V~lwdl~~~~~-l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
.....|++++++.|+.+... .. +...+...+.. ...+..-.....++++|.++.++++-..++.|+.+|..++.
T Consensus 182 ~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~ 261 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT 261 (433)
T ss_dssp SCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC
T ss_pred CCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe
Confidence 34678888888833333321 11 22233221110 01222233456788998556666666677899999998776
Q ss_pred EE-Ee--cCCCCceEEEEEccCCCEEEEE-eCCCcEEEEeCC
Q 009614 463 VV-DY--TDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIK 500 (531)
Q Consensus 463 ~~-~~--~~~~~~v~~v~~spdg~~l~sg-s~dg~I~iwd~~ 500 (531)
.. .+ .........++|+|+|++|+++ ...+.|+.++..
T Consensus 262 ~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 262 LTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 62 22 2222334579999999955554 456789998765
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.60 E-value=0.41 Score=47.17 Aligned_cols=108 Identities=14% Similarity=0.198 Sum_probs=66.5
Q ss_pred CeeEEEEcCCCeEEEEeC------------------CCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEE-eCC
Q 009614 390 EVLDLSWSKNGFLLSSSA------------------DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISG-SID 450 (531)
Q Consensus 390 ~I~~l~~sp~~~l~s~s~------------------Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sg-s~D 450 (531)
..+++.+.++|.++.+.. .+.|..+|. ++.......-...+.|+|+| |+++|+.+ +..
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~sp-Dg~~lYvadt~~ 242 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISP-DGKYVYIAELLA 242 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECT-TSSEEEEEEGGG
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECC-CCCEEEEEeCCC
Confidence 567888888884433332 133444443 43333333445678999999 88766555 467
Q ss_pred CeEEEEeCCC-CeEE--EecCCCCceEEEEEcc-CCCEEEEEeCC-CcEEEEeCC
Q 009614 451 GKVRIWEVRR-CQVV--DYTDIREIVSAVCYCP-DGKGGIVGTMT-GNCRFYDIK 500 (531)
Q Consensus 451 g~I~Iwd~~~-~~~~--~~~~~~~~v~~v~~sp-dg~~l~sgs~d-g~I~iwd~~ 500 (531)
+.|..|++.. +++. .........-.+++.+ +|++.+++..+ +.|..|+..
T Consensus 243 ~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 243 HKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 8999999863 3332 1223356678899999 59987766644 345445544
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.52 E-value=0.44 Score=46.18 Aligned_cols=112 Identities=5% Similarity=-0.057 Sum_probs=72.7
Q ss_pred CeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEe--CCCeEEEEeCCCCeEE
Q 009614 390 EVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGS--IDGKVRIWEVRRCQVV 464 (531)
Q Consensus 390 ~I~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs--~Dg~I~Iwd~~~~~~~ 464 (531)
....+++.+. + ++++-...+.|.++++........+ ........|+++| .+.+|+... ..+.|...++......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDGSSRF 158 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEG-GGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence 3456777764 4 5555566788999998765433333 2445678999999 444444443 3578998888754332
Q ss_pred Ee-cCCCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCCC
Q 009614 465 DY-TDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKDN 502 (531)
Q Consensus 465 ~~-~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~~ 502 (531)
.+ ...-.....|+++|++..|+.+. ..+.|..+|+...
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 22 22334678999999776666554 4677999998743
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.44 E-value=0.08 Score=54.68 Aligned_cols=111 Identities=8% Similarity=0.121 Sum_probs=69.0
Q ss_pred CeeEEEE-------cCCC-eEEEEeCCC-------cEEEEECCC-CeEE-----EEeecCCceEEEEEeeCCCCEEEEEe
Q 009614 390 EVLDLSW-------SKNG-FLLSSSADK-------TVRLWQVGI-DRCL-----RVFSHNNYVTSVAFNPVDDNYFISGS 448 (531)
Q Consensus 390 ~I~~l~~-------sp~~-~l~s~s~Dg-------~V~lwdl~~-~~~l-----~~~~h~~~V~sv~fsp~d~~~l~sgs 448 (531)
....|+| ++++ +|+.+...+ .|.+++... +... ..+..-.....++++|.++.++++-.
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~ 266 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY 266 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC
Confidence 4677888 8888 566665443 256665333 1221 12221123457788996666777777
Q ss_pred CCCeEEEEeCC-------CCeE--------------EEecCCCCceEEEEEccCCCEEEEE-eCCCcEEEEeCC
Q 009614 449 IDGKVRIWEVR-------RCQV--------------VDYTDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIK 500 (531)
Q Consensus 449 ~Dg~I~Iwd~~-------~~~~--------------~~~~~~~~~v~~v~~spdg~~l~sg-s~dg~I~iwd~~ 500 (531)
.++.|..+|+. ++.. +.........+.|+|+|+|++|+++ +....|+.++..
T Consensus 267 ~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 267 EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 88899999987 4443 1122334456899999999965555 456778886543
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.44 E-value=1 Score=46.38 Aligned_cols=116 Identities=11% Similarity=0.063 Sum_probs=72.0
Q ss_pred CCeeEEEEcCCC-e-EEEEeCCCcEEEEECC--CCeEE--EEee-c---C------------CceE-EEEEe-------e
Q 009614 389 SEVLDLSWSKNG-F-LLSSSADKTVRLWQVG--IDRCL--RVFS-H---N------------NYVT-SVAFN-------P 438 (531)
Q Consensus 389 ~~I~~l~~sp~~-~-l~s~s~Dg~V~lwdl~--~~~~l--~~~~-h---~------------~~V~-sv~fs-------p 438 (531)
.....|+|+|++ . +++-+....|+.++.. ++... .++. . . .... .++.. +
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~ 389 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEE 389 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSC
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccC
Confidence 456799999999 4 4454567788886553 33221 2221 1 0 1234 45554 3
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCeEEEecCC--------------C----------CceEEEEEccC-CCEEEEEeCCCc
Q 009614 439 VDDNYFISGSIDGKVRIWEVRRCQVVDYTDI--------------R----------EIVSAVCYCPD-GKGGIVGTMTGN 493 (531)
Q Consensus 439 ~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~--------------~----------~~v~~v~~spd-g~~l~sgs~dg~ 493 (531)
++.++++-.....|+.++ .++.+..+.+. . .....|++.++ |.++++=.....
T Consensus 390 -~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~r 467 (496)
T 3kya_A 390 -EYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHT 467 (496)
T ss_dssp -CEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred -CCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCE
Confidence 677788877889999999 45665544322 1 23678999997 666666666778
Q ss_pred EEEEeCCCCeEEE
Q 009614 494 CRFYDIKDNQLYQ 506 (531)
Q Consensus 494 I~iwd~~~~~l~~ 506 (531)
|+.+++.......
T Consensus 468 Irki~~~~~~~~~ 480 (496)
T 3kya_A 468 IRTISMEQEENVA 480 (496)
T ss_dssp EEEEEECCCC---
T ss_pred EEEEECCCCcccc
Confidence 9999887665543
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.14 E-value=1.8 Score=46.17 Aligned_cols=231 Identities=6% Similarity=-0.079 Sum_probs=124.9
Q ss_pred eEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEE-EEEeCCCcEEEEEcccCccccceecCCC
Q 009614 249 ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHERLDGFDVQDT 327 (531)
Q Consensus 249 ~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-asgs~Dg~I~iWd~~~~~~~~~~~~~~~ 327 (531)
+|+.+ ..+.|+..++........ . .+ ..-..+..|+|++.+..| ++-..++.|..+++........+.....
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~--~---~~-~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVA--I---PL-TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEE--C---CC-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEE-eCCcEEEEECCCCCcceE--E---Ec-CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 34333 557788888875332110 0 01 123468899999865555 4555678898888865432222222222
Q ss_pred CCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEEEEcCC-CeEEEE
Q 009614 328 DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSKN-GFLLSS 405 (531)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l~~sp~-~~l~s~ 405 (531)
.+..+++.+... .++..+. ....+.+.+... .....+ .........|++.|. |.|+.+
T Consensus 81 ~P~GlAvD~~~~-~LY~tD~--------------~~~~I~v~~~dG-----~~~~~l~~~~l~~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 81 YPEGMAVDWLGK-NLYWADT--------------GTNRIEVSKLDG-----QHRQVLVWKDLDSPRALALDPAEGFMYWT 140 (628)
T ss_dssp CCCEEEEETTTT-EEEEEET--------------TTTEEEEEETTS-----TTCEEEECSSCCCEEEEEEETTTTEEEEE
T ss_pred CcceEEEEeCCC-EEEEEEC--------------CCCEEEEEecCC-----CcEEEEEeCCCCCcccEEEccCCCeEEEe
Confidence 233333332221 1111111 112222222211 111111 123345689999985 555544
Q ss_pred e--CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecCCCCceEEEEEccCCC
Q 009614 406 S--ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (531)
Q Consensus 406 s--~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~~~~~v~~v~~spdg~ 483 (531)
. ..+.|...++...........-.....|++++..+.++++-...+.|..+|+.......+...-.....+++.. +.
T Consensus 141 D~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ 219 (628)
T 4a0p_A 141 EWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DY 219 (628)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TE
T ss_pred CCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CE
Confidence 4 25678888887655444444556788999999334455555567899999987643322223333456777754 44
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEEE
Q 009614 484 GGIVGTMTGNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 484 ~l~sgs~dg~I~iwd~~~~~l~~~ 507 (531)
++++-...+.|...|..+++....
T Consensus 220 ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 220 IYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp EEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEecCCCCEEEEEECCCCCceEE
Confidence 445555578899999877764433
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.00 E-value=1.2 Score=42.88 Aligned_cols=114 Identities=11% Similarity=0.029 Sum_probs=74.3
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCC----CeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCC
Q 009614 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGI----DRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (531)
Q Consensus 389 ~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~----~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~ 461 (531)
..+..++|++.+ .+++-...+.|..+++.. ......+. .-.....|++++..++++++-...+.|.++++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 456789999854 555556678999999876 22222232 22456789998745556666677889999999865
Q ss_pred eEEEec-CCCCceEEEEEccCCCEEEEEeCC--CcEEEEeCCCC
Q 009614 462 QVVDYT-DIREIVSAVCYCPDGKGGIVGTMT--GNCRFYDIKDN 502 (531)
Q Consensus 462 ~~~~~~-~~~~~v~~v~~spdg~~l~sgs~d--g~I~iwd~~~~ 502 (531)
....+. ..-.....+++.|.+..|+.+... +.|..+++...
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 443322 234567899999976666555543 67888887643
No 293
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.78 E-value=1.5 Score=43.54 Aligned_cols=198 Identities=7% Similarity=-0.093 Sum_probs=104.6
Q ss_pred ccceeeeCCCCeE-EeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCE-EEEEeCCCcEEEEEccc
Q 009614 238 HGSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQY-LASGGEDGTVRVWKVIE 315 (531)
Q Consensus 238 ~~s~~fspdg~~l-asgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~-Lasgs~Dg~I~iWd~~~ 315 (531)
...++|++.+..| ++-...+.|..++....... ..+.........|++.+.+.. +++-...+.|.+.++..
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-------~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-------EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE-------EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE-------EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 3457888755544 45556788999988754321 112222234567888875544 45555567788887754
Q ss_pred CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEE
Q 009614 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDL 394 (531)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l 394 (531)
......+......+..+.+.+.. ..++..+... ...+..++... .....+ .......+.|
T Consensus 191 ~~~~~l~~~~l~~P~giavdp~~-g~ly~td~~~-------------~~~I~r~~~dG-----~~~~~~~~~~~~~PnGl 251 (386)
T 3v65_B 191 AHRKVLLWQSLEKPRAIALHPME-GTIYWTDWGN-------------TPRIEASSMDG-----SGRRIIADTHLFWPNGL 251 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEETTT-TEEEEEECSS-------------SCEEEEEETTS-----CSCEEEECSSCSCEEEE
T ss_pred CceEEeecCCCCCCcEEEEEcCC-CeEEEeccCC-------------CCEEEEEeCCC-----CCcEEEEECCCCCeeeE
Confidence 33221121111223333332222 1122111111 12232222211 111111 1223457899
Q ss_pred EEcCCC--eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeE
Q 009614 395 SWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV 463 (531)
Q Consensus 395 ~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~ 463 (531)
+++|++ ++++-+..+.|..+|+........+. .......|++ . .+.++++....+.|..++..+++.
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~-~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 252 TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-F-EDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp EEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-E-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-E-CCEEEEeeCCCCeEEEEECCCCcc
Confidence 999765 44555667889999987544333332 3345677888 3 566777777788999998665543
No 294
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.77 E-value=0.75 Score=45.27 Aligned_cols=94 Identities=14% Similarity=0.228 Sum_probs=59.1
Q ss_pred CCcEEEEECCCC-eE---EEEeec--CCceEEEEEeeCCCCEEEEEeC-----------------CCeEEEEeCCCCeEE
Q 009614 408 DKTVRLWQVGID-RC---LRVFSH--NNYVTSVAFNPVDDNYFISGSI-----------------DGKVRIWEVRRCQVV 464 (531)
Q Consensus 408 Dg~V~lwdl~~~-~~---l~~~~h--~~~V~sv~fsp~d~~~l~sgs~-----------------Dg~I~Iwd~~~~~~~ 464 (531)
+.+|.+|++... .. +..+.+ -...+.+.+.+ ++.++++... .|.|.-+|.. ++.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE
Confidence 466778776543 22 223332 24578999999 8887777541 2445555553 322
Q ss_pred EecCCCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCC-CeE
Q 009614 465 DYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKD-NQL 504 (531)
Q Consensus 465 ~~~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~-~~l 504 (531)
.....-...+.++|+||++.|+++. ..+.|+.|++.. +++
T Consensus 215 ~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l 256 (355)
T 3sre_A 215 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL 256 (355)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcE
Confidence 2222334568899999998877765 578899999863 444
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.71 E-value=1.2 Score=47.36 Aligned_cols=199 Identities=7% Similarity=-0.040 Sum_probs=110.5
Q ss_pred cceeeeCCCCeEEee-ecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEE-EEeCCCcEEEEEcccC
Q 009614 239 GSATLKPGDHELTLG-QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGEDGTVRVWKVIEH 316 (531)
Q Consensus 239 ~s~~fspdg~~lasg-s~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-sgs~Dg~I~iWd~~~~ 316 (531)
..++|++.+..|... ...++|..++....... ...+...-.....|++.+.+..|+ +-...+.|.+.++...
T Consensus 43 ~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~------~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 43 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC-----C------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEEeCCCEEEEEECCCCeEEEEEccCCCce------EEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 357889866665544 44678888887643210 011222235688999998655554 4455678888876432
Q ss_pred ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEEE
Q 009614 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (531)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~~ 396 (531)
.. ..+ +.........|++
T Consensus 117 ~~-~~l-------------------------------------------------------------~~~~l~~P~~Iav 134 (619)
T 3s94_A 117 LR-KVL-------------------------------------------------------------FWQELDQPRAIAL 134 (619)
T ss_dssp SC-EEE-------------------------------------------------------------ECSSCSCCCCEEE
T ss_pred CE-EEE-------------------------------------------------------------EeCCCCCCceEEE
Confidence 21 000 0011223557788
Q ss_pred cCC-CeEEEEeC--CCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEEecC-CCC
Q 009614 397 SKN-GFLLSSSA--DKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD-IRE 471 (531)
Q Consensus 397 sp~-~~l~s~s~--Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~~~~-~~~ 471 (531)
.|. |.|+.+.. .+.|...++.......... .-...+.|+++|..++++++-...+.|...|+.......+.. ...
T Consensus 135 dp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~ 214 (619)
T 3s94_A 135 DPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP 214 (619)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC--------
T ss_pred ecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCC
Confidence 875 44444432 3566666665443333332 335678999999445555555667789999997654432211 122
Q ss_pred ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
...+|++..+ ..+++-...+.|...|..+++...
T Consensus 215 ~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 215 HPFALTLFED-ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp -CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCE
T ss_pred CceEEEEeCC-EEEEecCCCCEEEEEECCCCcccE
Confidence 2346677655 344444456789999988776543
No 296
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.63 E-value=1.7 Score=41.95 Aligned_cols=222 Identities=15% Similarity=0.212 Sum_probs=130.4
Q ss_pred CeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEee
Q 009614 257 RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTI 336 (531)
Q Consensus 257 g~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 336 (531)
..|.|-|+.+...... +.+.+ .. .--+|..+.||-=. ..++.|+|+.+...++.+...+ ..++|.+
T Consensus 49 ~~VvIiDl~n~~~~~R-----rpi~A-ds----AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e---~VvfWkW 114 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIR-----RPISA-DS----AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD---DVTFWKW 114 (365)
T ss_dssp EEEEEEETTSTTSCEE-----EECCC-SE----EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS---CEEEEEE
T ss_pred CEEEEEECCCCCCccc-----ccccc-ce----eeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC---ccEEEEe
Confidence 4788888886554211 11111 12 22377777666654 5789999999998888776654 3556665
Q ss_pred cCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC----CCeeEEEEcCCC--eEEEEe----
Q 009614 337 NHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS----SEVLDLSWSKNG--FLLSSS---- 406 (531)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~I~~l~~sp~~--~l~s~s---- 406 (531)
-....+..+. +..++.|+... ...|++.+..|. ..|.....+++. .+++|-
T Consensus 115 is~~~L~lVT----------------~taVyHWs~~~---~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~ 175 (365)
T 2xzh_A 115 ISLNTVALVT----------------DNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQ 175 (365)
T ss_dssp CSSSEEEEEE----------------SSEEEEEESST---TCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEET
T ss_pred cCCCeEEEEc----------------CCcEEEEcccC---CCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccC
Confidence 5544443322 23455665432 235666666553 346666667776 344432
Q ss_pred --CCCcEEEEECCCCeEEEEeecCCceEEEEE--eeCCCCEEEEEeC---CCeEEEEeCCCC---------eEEEe-cC-
Q 009614 407 --ADKTVRLWQVGIDRCLRVFSHNNYVTSVAF--NPVDDNYFISGSI---DGKVRIWEVRRC---------QVVDY-TD- 468 (531)
Q Consensus 407 --~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~f--sp~d~~~l~sgs~---Dg~I~Iwd~~~~---------~~~~~-~~- 468 (531)
-.|.+.||..+.+.....-.|...-..+.+ ++...++|+.+.. .++++|-++... +.+.. ..
T Consensus 176 ~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fpp 255 (365)
T 2xzh_A 176 NRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 255 (365)
T ss_dssp TEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCT
T ss_pred CccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCc
Confidence 236788898877655444334332222221 1101123333222 258999998432 12221 11
Q ss_pred --CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 469 --IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 469 --~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
..+-..++..++.-..+..-+.-|.|++||+.++.++...++.
T Consensus 256 ea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 256 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp TCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred cccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 2344667888888888999999999999999999999877654
No 297
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.51 E-value=0.34 Score=48.56 Aligned_cols=128 Identities=16% Similarity=0.172 Sum_probs=83.0
Q ss_pred cCCC-eEEEEeCCCcEEEEECCCCeEEEEeecC-----CceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe--------
Q 009614 397 SKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHN-----NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ-------- 462 (531)
Q Consensus 397 sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~h~-----~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~-------- 462 (531)
..+| .++.+- ++.||.-++......+.+..+ ..|..+..+| +|++||..+. ..|.|-.+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFND-NEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEECS-SEEEEEECCTTCSCCCCHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEecC-CeEEEEEecCccccCccccc
Confidence 3445 444443 478888888755455555433 2578899999 9999998864 589998887321
Q ss_pred -----E--EEecC----CCCceEEEEEccC---CCEEEEEeCCCcEEEEeCCCCeEEEEeeeeecccc-----cCCCcee
Q 009614 463 -----V--VDYTD----IREIVSAVCYCPD---GKGGIVGTMTGNCRFYDIKDNQLYQQNQICLQGKK-----KLPGKRI 523 (531)
Q Consensus 463 -----~--~~~~~----~~~~v~~v~~spd---g~~l~sgs~dg~I~iwd~~~~~l~~~~~~~~~~~k-----k~~~~~I 523 (531)
+ ..+.. ....|..+.|||- +..|++-..|+.|++||+....-.-. .+..+. -.....|
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~---~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI---VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE---EESCCCSEEESCSSCCCE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc---chhccccccCCCcccceE
Confidence 1 11111 2567999999994 56899999999999999986321111 111111 1122678
Q ss_pred eeEEEee
Q 009614 524 TGFQVVK 530 (531)
Q Consensus 524 t~l~f~p 530 (531)
++++|.+
T Consensus 183 ~S~~Fg~ 189 (452)
T 3pbp_A 183 TDLEFSK 189 (452)
T ss_dssp EEEEECT
T ss_pred EEEEEcC
Confidence 8888864
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.41 E-value=2.6 Score=42.45 Aligned_cols=223 Identities=14% Similarity=0.209 Sum_probs=130.3
Q ss_pred CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEe
Q 009614 256 MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFT 335 (531)
Q Consensus 256 dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~ 335 (531)
...|.|-|+........ +.+.+ . +.-.+|..+.||-=. ..++.|+|+.+...++.+...+. .++|.
T Consensus 47 ~~~vvIiDl~~~~~~~r-----rpi~A-d----sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~---VvfWk 112 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIR-----RPISA-D----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD---VTFWK 112 (494)
T ss_dssp CCEEEEEETTSTTSCEE-----EECCC-S----EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC---CCEEE
T ss_pred CCeEEEEECCCCCccee-----ccccc-c----eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC---ceEEE
Confidence 34788888886543311 11111 1 223466666555544 67899999999988888776554 33443
Q ss_pred ecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCC----CCeeEEEEcCCC--eEEEEe---
Q 009614 336 INHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS----SEVLDLSWSKNG--FLLSSS--- 406 (531)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~I~~l~~sp~~--~l~s~s--- 406 (531)
+-....+..+ .+..++.|+... ...|++.+..|. ..|.....+++. .+++|=
T Consensus 113 Wis~~~l~lV----------------T~taVyHWsi~~---~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 173 (494)
T 1bpo_A 113 WISLNTVALV----------------TDNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (494)
T ss_dssp EEETTEEEEE----------------CSSEEEEEESSS---SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred ecCCCeEEEE----------------cCCeeEEecccC---CCCchhheecchhcccceEEEEEECCCCCeEEEEeeccc
Confidence 3332222211 233456665433 235666666653 356666677777 343332
Q ss_pred ---CCCcEEEEECCCCeEEEEeecCCceEEEEEe--eCCCCEEEEEeC---CCeEEEEeCCCC---------eEEEec--
Q 009614 407 ---ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFN--PVDDNYFISGSI---DGKVRIWEVRRC---------QVVDYT-- 467 (531)
Q Consensus 407 ---~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fs--p~d~~~l~sgs~---Dg~I~Iwd~~~~---------~~~~~~-- 467 (531)
..|.+.+|..+.+.....-+|...-..+.+. +....+|+.+.. .++++|.++... +.+...
T Consensus 174 ~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp 253 (494)
T 1bpo_A 174 QNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 253 (494)
T ss_dssp TTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC
T ss_pred CCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC
Confidence 2467889988776554443444333322221 101123333333 278999998542 222211
Q ss_pred --CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 468 --DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 468 --~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
...+-..++..++.-..+..-+.-|.|++||+.++.++...++.
T Consensus 254 pe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 254 PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp TTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred cccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc
Confidence 12344677888988889999999999999999999999877653
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.33 E-value=2.5 Score=46.43 Aligned_cols=117 Identities=8% Similarity=-0.040 Sum_probs=79.6
Q ss_pred CCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCC-CeEEEEeCCCCe
Q 009614 387 HSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID-GKVRIWEVRRCQ 462 (531)
Q Consensus 387 h~~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~D-g~I~Iwd~~~~~ 462 (531)
.......|++.+.+ ++++-...+.|.+.++........+. .-.....|+++|..+.++++-... +.|.+.++....
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 34556788888765 55566678899999998665544443 345689999999445444544333 789999998765
Q ss_pred EEEecC-CCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCCCe
Q 009614 463 VVDYTD-IREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKDNQ 503 (531)
Q Consensus 463 ~~~~~~-~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~~~ 503 (531)
...+.. .-.....|++.+.+..|+.+. ..+.|..+++....
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 544333 335788999998776666654 45678888886543
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.29 E-value=0.89 Score=44.48 Aligned_cols=92 Identities=9% Similarity=0.146 Sum_probs=66.1
Q ss_pred CCcEEEEECC--CCeEEEEeec-------C-CceEEEEE--eeCCCC-EEEEEeCCCeEEEEeCC-------CCeEEEec
Q 009614 408 DKTVRLWQVG--IDRCLRVFSH-------N-NYVTSVAF--NPVDDN-YFISGSIDGKVRIWEVR-------RCQVVDYT 467 (531)
Q Consensus 408 Dg~V~lwdl~--~~~~l~~~~h-------~-~~V~sv~f--sp~d~~-~l~sgs~Dg~I~Iwd~~-------~~~~~~~~ 467 (531)
+.+|++|++. ++. +..+.. . ..+..+|+ +|..+. ++++...+|.+..|++. +.+++...
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5789999773 343 544421 1 55667887 673444 68888889999999983 23455555
Q ss_pred CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCC
Q 009614 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (531)
Q Consensus 468 ~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~ 500 (531)
.....+-.+...+....|+++-.+.-|..|+..
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 556788899999988999999998778777865
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.11 E-value=0.38 Score=48.21 Aligned_cols=108 Identities=15% Similarity=0.188 Sum_probs=74.4
Q ss_pred CeeEEEEcCCCeEEEEeCCCcEEEEECCCCe------------EEEEee-------cCCceEEEEEeeC--CCCEEEEEe
Q 009614 390 EVLDLSWSKNGFLLSSSADKTVRLWQVGIDR------------CLRVFS-------HNNYVTSVAFNPV--DDNYFISGS 448 (531)
Q Consensus 390 ~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~------------~l~~~~-------h~~~V~sv~fsp~--d~~~l~sgs 448 (531)
.|..+..+|+|.+++-..+..|.|-.+..+. ..+.+. ...+|..+.|||. .+..|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 5778999999955555567789999887321 123333 2467999999994 345899999
Q ss_pred CCCeEEEEeCCCCe--EEEe---------cCCCCceEEEEEccCCCEEEEEe--CCCcEEEE
Q 009614 449 IDGKVRIWEVRRCQ--VVDY---------TDIREIVSAVCYCPDGKGGIVGT--MTGNCRFY 497 (531)
Q Consensus 449 ~Dg~I~Iwd~~~~~--~~~~---------~~~~~~v~~v~~spdg~~l~sgs--~dg~I~iw 497 (531)
.|+.||+||+.... +..+ ......|.++||.++|-.|.+.+ ..|.|+-.
T Consensus 147 sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 147 EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999998621 1111 12225688999999887777755 66666543
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.04 E-value=2.7 Score=40.58 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=64.8
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEE-EEEC--CCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE
Q 009614 388 SSEVLDLSWSKNGFLLSSSADKTVR-LWQV--GIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (531)
Q Consensus 388 ~~~I~~l~~sp~~~l~s~s~Dg~V~-lwdl--~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~ 464 (531)
...+..+.+.+++.++..+.++.+. -+|- .+-+.+ .......+..+.+.| ++.+++ ++.+|.+++.+...++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~-~g~~~~-~~~~G~~~~s~~D~G~tW 238 (327)
T 2xbg_A 162 IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTP-DGRLWM-IVNGGKIAFSDPDNSENW 238 (327)
T ss_dssp CCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECT-TSCEEE-EETTTEEEEEETTEEEEE
T ss_pred CcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECC-CCCEEE-EeCCceEEEecCCCCCee
Confidence 3457788888888444444455443 3442 122222 123556788999988 776554 456788887753333332
Q ss_pred E-ec----CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q 009614 465 D-YT----DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQ 503 (531)
Q Consensus 465 ~-~~----~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~ 503 (531)
. .. .....+.++.+.+++..++++. +|.| ++....|+
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 239 GELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQ 280 (327)
T ss_dssp CCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTS
T ss_pred EeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCc
Confidence 2 11 1223588999999887666655 6766 45555554
No 303
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.00 E-value=2.9 Score=40.80 Aligned_cols=196 Identities=7% Similarity=-0.086 Sum_probs=104.9
Q ss_pred cceeeeCCCCeE-EeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCC-EEEEEeCCCcEEEEEcccC
Q 009614 239 GSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQ-YLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 239 ~s~~fspdg~~l-asgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~-~Lasgs~Dg~I~iWd~~~~ 316 (531)
..++|++.+..| ++-...+.|..++....... ..+.........|++.+.+. ++++-...+.|.+.++...
T Consensus 76 ~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-------~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 76 IALDFHHRRELVFWSDVTLDRILRANLNGSNVE-------EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-------EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEeccccEEEEEeccCCceEEEecCCCCce-------EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 457888765555 44456788998888754321 11222223457889987544 4455556788999887644
Q ss_pred ccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEEE
Q 009614 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLS 395 (531)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l~ 395 (531)
.....+......+..+.+.+.. ..++..+... ...+..++... .....+ .......+.|+
T Consensus 149 ~~~~l~~~~l~~P~~iavdp~~-g~ly~td~~~-------------~~~I~r~~~dG-----~~~~~~~~~~~~~PnGla 209 (349)
T 3v64_C 149 HRKVLLWQSLEKPRAIALHPME-GTIYWTDWGN-------------TPRIEASSMDG-----SGRRIIADTHLFWPNGLT 209 (349)
T ss_dssp SCEEEECTTCSCEEEEEEETTT-TEEEEEECSS-------------SCEEEEEETTS-----CSCEESCCSSCSCEEEEE
T ss_pred ceEEEEeCCCCCcceEEEecCc-CeEEEeccCC-------------CCEEEEEeCCC-----CCcEEEEECCCCCcceEE
Confidence 3222121112223333333222 1222222111 12232222211 111111 12234578999
Q ss_pred EcCCC--eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 396 WSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 396 ~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
++|++ +.++-...+.|..+|+........+. .......|++ . .+.++++-...+.|..++..+++
T Consensus 210 ~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~-~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 210 IDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-F-EDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-E-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-E-CCEEEEecCCCCeEEEEEccCCC
Confidence 99865 44555567889999987544333332 3345677887 3 56677777778889888865554
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.94 E-value=3.1 Score=40.77 Aligned_cols=244 Identities=12% Similarity=0.039 Sum_probs=116.7
Q ss_pred cccceeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC---CCEEEEEeC----C----
Q 009614 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD---GQYLASGGE----D---- 305 (531)
Q Consensus 237 ~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd---g~~Lasgs~----D---- 305 (531)
....++|.|+|.++++ ...|+|++++.. ....+..+. .+.........|+|+|+ +..|+.+.. +
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~~-G~~~~~~~~---v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISPS-GKKLVASFD---VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECSS-CEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeCC-CceEeeccc---eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 3446899999985555 556999999733 221111110 11122356889999997 445544432 3
Q ss_pred CcEEEEEcccCc-------c-ccceecC-CCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccc
Q 009614 306 GTVRVWKVIEHE-------R-LDGFDVQ-DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL 376 (531)
Q Consensus 306 g~I~iWd~~~~~-------~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (531)
..|..|+..... . +..+... ......+.+.++. .++....+...... ..-.....+.++.+++...-.
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG--~Lyvt~G~~~~~~~-~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG--MLYITTGDAADPRL-AQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS--CEEEECCCTTCGGG-GTCTTCCSSEEEEECTTSCCC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC--cEEEEECCCCCCcc-ccCCCCCCeEEEEEcCCCCCC
Confidence 556667665431 0 0111110 1112233333322 22222111110000 000112234455554432100
Q ss_pred cCcc----eeEeecCCCCeeEEEEcC-CCeEEEEeCCC----cEEEEECCC----------------CeEEEEe-ecCCc
Q 009614 377 LEKP----LHEFQGHSSEVLDLSWSK-NGFLLSSSADK----TVRLWQVGI----------------DRCLRVF-SHNNY 430 (531)
Q Consensus 377 ~~~~----~~~~~~h~~~I~~l~~sp-~~~l~s~s~Dg----~V~lwdl~~----------------~~~l~~~-~h~~~ 430 (531)
...+ .....+| .....|+|+| ++.|+++.... .|.+..-.. ..++..+ .....
T Consensus 182 ~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp TTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 0000 1111233 3456899999 56554443321 133322110 0122333 22345
Q ss_pred eEEEEEee------CCCCEEEEEeCCCeEEEEeCCCC-eEE---Eec-CCCCceEEEEEccCCCEEEEEe
Q 009614 431 VTSVAFNP------VDDNYFISGSIDGKVRIWEVRRC-QVV---DYT-DIREIVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 431 V~sv~fsp------~d~~~l~sgs~Dg~I~Iwd~~~~-~~~---~~~-~~~~~v~~v~~spdg~~l~sgs 489 (531)
...++|.. .++.++++.-..+.|...++... +.. .+. .....+..+++.|||.++++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 77888841 26777777777788988888753 332 222 2245789999999997666654
No 305
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.85 E-value=2.7 Score=42.78 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=22.1
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 009614 284 EGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (531)
Q Consensus 284 ~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~ 314 (531)
-...+.|+|.|+|+++++--..+.|++++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 3467899999999977765444467777643
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.74 E-value=2.9 Score=39.45 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=57.4
Q ss_pred CcEEEEECCCCeEEEEeecC--CceEEEEEeeCCCCEEEEEeCC-----CeEEEEeCCCCeEEEecCCC---CceEEEEE
Q 009614 409 KTVRLWQVGIDRCLRVFSHN--NYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIR---EIVSAVCY 478 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~h~--~~V~sv~fsp~d~~~l~sgs~D-----g~I~Iwd~~~~~~~~~~~~~---~~v~~v~~ 478 (531)
..+.+||+.+.+....-... ..-.+++.. ++.+++.|+.+ ..|.+||+.+.+-....... .....+.
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 251 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV- 251 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE-
Confidence 45888998887665443211 111122222 56777887764 46899999988765433221 1122222
Q ss_pred ccCCCEEEEEeCC-----CcEEEEeCCCCeEEEE
Q 009614 479 CPDGKGGIVGTMT-----GNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 479 spdg~~l~sgs~d-----g~I~iwd~~~~~l~~~ 507 (531)
-++++++.|+.+ ..+.+||+.+++-...
T Consensus 252 -~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 252 -LRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp -ETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred -ECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 367788888766 3588999998876543
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.73 E-value=0.39 Score=43.66 Aligned_cols=96 Identities=9% Similarity=-0.029 Sum_probs=56.9
Q ss_pred eeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEE------Eee--cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 391 VLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLR------VFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 391 I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~------~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
...+.|.|+|.|+.. .||.|.-++-.+..... .+. -=..+..|.|.| ++.+.++. |+.++-+...+..
T Consensus 90 F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSN 165 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSST
T ss_pred ceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCC
Confidence 467889999966665 56988877754321111 111 114579999999 88877776 7876544433221
Q ss_pred EEE------e-c-CCCCceEEEEEccCCCEEEEEeCCC
Q 009614 463 VVD------Y-T-DIREIVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 463 ~~~------~-~-~~~~~v~~v~~spdg~~l~sgs~dg 492 (531)
... . . ..-.....+.|.|+|.+.++. +|
T Consensus 166 ~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g 201 (236)
T 1tl2_A 166 QDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG 201 (236)
T ss_dssp TCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred CcccccccceeccCCcceEEEEEECCCCcEEEEe--CC
Confidence 111 1 1 222234557788888766666 66
No 308
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.29 E-value=0.17 Score=54.91 Aligned_cols=111 Identities=9% Similarity=-0.010 Sum_probs=67.3
Q ss_pred eEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEEEEeCC-CeEEEEeCCCCeEEEe-
Q 009614 392 LDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID-GKVRIWEVRRCQVVDY- 466 (531)
Q Consensus 392 ~~l~~sp~-~-~l~s~s~Dg~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~sgs~D-g~I~Iwd~~~~~~~~~- 466 (531)
..|++.+. + ++++-...+.|.++++........+. .......|+++|..+.++++-... +.|.++++.......+
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~ 535 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 535 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE
Confidence 45666643 3 44454566788899887655444433 234567889999444444443333 6888888765432222
Q ss_pred cCCCCceEEEEEccCCCEEEEE-eCCCcEEEEeCCCC
Q 009614 467 TDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIKDN 502 (531)
Q Consensus 467 ~~~~~~v~~v~~spdg~~l~sg-s~dg~I~iwd~~~~ 502 (531)
...-.....|+|+|++..|+.+ ...+.|..+++...
T Consensus 536 ~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 536 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 1223456789999976555444 45678999998753
No 309
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.20 E-value=5 Score=39.97 Aligned_cols=203 Identities=9% Similarity=-0.056 Sum_probs=106.1
Q ss_pred ccceeeeCCCCeE-EeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC-CCEEEEEeCCCcEEEEEccc
Q 009614 238 HGSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWKVIE 315 (531)
Q Consensus 238 ~~s~~fspdg~~l-asgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~Lasgs~Dg~I~iWd~~~ 315 (531)
...++|++.+..| ++-...+.|+.++....... ......+.........|++.+. +++.++-...+.|.+.++..
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~---~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV---SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC---------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCC---CcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4457899865555 44455688888887642210 0011122223456789999884 54555555678898888765
Q ss_pred CccccceecCCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEe-ecCCCCeeEE
Q 009614 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDL 394 (531)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~I~~l 394 (531)
......+......+..+.+.+.. ..++..+... ...+...+.. +.....+ .........|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~-g~ly~td~~~-------------~~~I~~~~~d-----G~~~~~~~~~~l~~P~gl 251 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGT-------------PAKIKKGGLN-----GVDIYSLVTENIQWPNGI 251 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTT-TEEEEEECSS-------------SCCEEEEETT-----SCSCEEEECSSCSCEEEE
T ss_pred CceEEEEeCCCCCcceEEEeccc-CeEEEEeCCC-------------CCEEEEEeCC-----CCccEEEEECCCCceEEE
Confidence 43322222222223333333222 1122222111 1122222211 1111111 2233567899
Q ss_pred EEcCCC-eE-EEEeCCCcEEEEECCCCeEEEEee---cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEE
Q 009614 395 SWSKNG-FL-LSSSADKTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (531)
Q Consensus 395 ~~sp~~-~l-~s~s~Dg~V~lwdl~~~~~l~~~~---h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~ 464 (531)
++++.+ .| ++-...+.|..+|+.......... .-.....|++. .+.++++-...+.|..+|..+++.+
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 252 TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred EEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCce
Confidence 999866 44 444567889999987654433332 22445677773 4566777777788999997776543
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.18 E-value=5.8 Score=42.14 Aligned_cols=115 Identities=6% Similarity=-0.055 Sum_probs=74.6
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEe-ecCCceEEEEEeeCCCCEEEEEe-CCCeEEEEeCCCCeEE
Q 009614 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRRCQVV 464 (531)
Q Consensus 389 ~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~-~h~~~V~sv~fsp~d~~~l~sgs-~Dg~I~Iwd~~~~~~~ 464 (531)
.....|++.+.+ ++++-...+.|.+.++........+ ..-.....|+++|..+.++++-. ..+.|...++......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 356788888844 5555567789999999765443333 23455778999994454555532 2467777777654333
Q ss_pred Ee-cCCCCceEEEEEccCCCEEEEEe-CCCcEEEEeCCCCe
Q 009614 465 DY-TDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKDNQ 503 (531)
Q Consensus 465 ~~-~~~~~~v~~v~~spdg~~l~sgs-~dg~I~iwd~~~~~ 503 (531)
.+ ...-...+.|++.+++..|+.+. ..+.|..+|+....
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~ 204 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 204 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc
Confidence 22 23345678999999766665554 45678888887543
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.17 E-value=1.1 Score=44.19 Aligned_cols=27 Identities=15% Similarity=0.155 Sum_probs=20.7
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 009614 285 GSILTMKFSLDGQYLASGGEDGTVRVWK 312 (531)
Q Consensus 285 ~~I~~l~fspdg~~Lasgs~Dg~I~iWd 312 (531)
...+.|+|.|+|++++ +..+|.|++++
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d 55 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS 55 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe
Confidence 4578999999997554 55668888886
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.08 E-value=11 Score=43.34 Aligned_cols=118 Identities=10% Similarity=0.124 Sum_probs=76.9
Q ss_pred CeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEE--EeecCCceEEEEEeeCC-----CCEEEEEeC-CCeEEEEeCCCC
Q 009614 390 EVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLR--VFSHNNYVTSVAFNPVD-----DNYFISGSI-DGKVRIWEVRRC 461 (531)
Q Consensus 390 ~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~--~~~h~~~V~sv~fsp~d-----~~~l~sgs~-Dg~I~Iwd~~~~ 461 (531)
.|...+.+.. +++.++ .+.+.++.+..++... .......|.|+++.|.. ..+++.|.. |++|+|+++.+.
T Consensus 515 ~I~~As~n~~-~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 515 NISVASCNSS-QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCCEEEECSS-EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEEeCCC-EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 4665555433 444444 5778888877654322 22356789999998732 479999997 999999999987
Q ss_pred eEEEecCC--CCceEEEEEcc--CCCEEEEEeCCCcEEEEe--CCCCeEEEEee
Q 009614 462 QVVDYTDI--REIVSAVCYCP--DGKGGIVGTMTGNCRFYD--IKDNQLYQQNQ 509 (531)
Q Consensus 462 ~~~~~~~~--~~~v~~v~~sp--dg~~l~sgs~dg~I~iwd--~~~~~l~~~~~ 509 (531)
+.+..... ...+.++++.. ...+|.+|-.||.+.-+. ..+|++.....
T Consensus 593 ~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~ 646 (1158)
T 3ei3_A 593 ELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK 646 (1158)
T ss_dssp CEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEE
T ss_pred CeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcccccee
Confidence 76643322 23455555442 335788999999875554 45677765543
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.78 E-value=2.7 Score=41.12 Aligned_cols=37 Identities=14% Similarity=0.045 Sum_probs=27.0
Q ss_pred EcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccC
Q 009614 280 FLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (531)
Q Consensus 280 l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~ 316 (531)
+...-..-+.|+|.|||++|++--..|.|++++...+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCC
Confidence 3334456789999999997777655888888875443
No 314
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.50 E-value=6 Score=38.58 Aligned_cols=64 Identities=22% Similarity=0.264 Sum_probs=43.8
Q ss_pred eecCCceEEEEEeeC------CCCEEEEEeCCCeEEEEeCCCCeEEE---ec-CCCCceEEEEEccCCCEEEEE
Q 009614 425 FSHNNYVTSVAFNPV------DDNYFISGSIDGKVRIWEVRRCQVVD---YT-DIREIVSAVCYCPDGKGGIVG 488 (531)
Q Consensus 425 ~~h~~~V~sv~fsp~------d~~~l~sgs~Dg~I~Iwd~~~~~~~~---~~-~~~~~v~~v~~spdg~~l~sg 488 (531)
+.+...+..+.|.+. ++.+|++.-..+.|...++..++.+. +. .....+..+++.|||.++++.
T Consensus 267 ~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 267 WKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp ESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred eCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 334456778888641 46777777778888888887765442 22 334578999999999866543
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.21 E-value=5.7 Score=37.45 Aligned_cols=96 Identities=8% Similarity=0.165 Sum_probs=57.8
Q ss_pred CcEEEEECCCCeEEEEeecC--CceEEEEEeeCCCCEEEEEeCC-----CeEEEEeCCCCeEEEecCCC---CceEEEEE
Q 009614 409 KTVRLWQVGIDRCLRVFSHN--NYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIR---EIVSAVCY 478 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~h~--~~V~sv~fsp~d~~~l~sgs~D-----g~I~Iwd~~~~~~~~~~~~~---~~v~~v~~ 478 (531)
..+.+||+.+.+....-... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.+-....... .....+.+
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 45888999887655443211 111222222 56777777654 36899999987655432221 12223333
Q ss_pred ccCCCEEEEEeCC-----CcEEEEeCCCCeEEEEe
Q 009614 479 CPDGKGGIVGTMT-----GNCRFYDIKDNQLYQQN 508 (531)
Q Consensus 479 spdg~~l~sgs~d-----g~I~iwd~~~~~l~~~~ 508 (531)
++++++.|+.+ ..+.+||+.+++-....
T Consensus 247 --~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 247 --GSIVYVLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp --TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred --CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 77788888854 46899999988765543
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.98 E-value=1.9 Score=42.29 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=21.7
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 009614 285 GSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (531)
Q Consensus 285 ~~I~~l~fspdg~~Lasgs~Dg~I~iWd~ 313 (531)
...+.|+|.|+|+.|+.+...|.|++++.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~ 46 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA 46 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC
Confidence 45789999999983444556788888874
No 317
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.98 E-value=11 Score=40.79 Aligned_cols=111 Identities=11% Similarity=0.094 Sum_probs=71.5
Q ss_pred CCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEe-e-----cCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCe
Q 009614 389 SEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVF-S-----HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 389 ~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~-~-----h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~ 462 (531)
..|.++...+++.|..++..| |..++..+++..... . ....|.++...+ ++..|..|+. +-+..+|..+++
T Consensus 146 ~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCe
Confidence 468888888788666666554 778888776543221 1 123488888876 5665555553 468889988876
Q ss_pred EEEecC-CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q 009614 463 VVDYTD-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 463 ~~~~~~-~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l 504 (531)
...... ....|.++...++|.+. +|+.+ -+.+|+..+++.
T Consensus 223 ~~~~~~l~~~~i~~i~~d~~g~lW-igT~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 223 IKQTEAFHNNSIKSLALDGNGDLL-AGTDN-GLYVYHNDTTPL 263 (758)
T ss_dssp EEEEEEEEEEEEEEEEECTTCCEE-EEETT-EEEEECCTTSCC
T ss_pred EEeccCCCCCeEEEEEEcCCCCEE-EEeCC-ceeEEecCCCcE
Confidence 543221 23457888888787654 45544 488888877654
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.95 E-value=0.088 Score=47.92 Aligned_cols=101 Identities=11% Similarity=0.021 Sum_probs=62.9
Q ss_pred CCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEeecCCc--------eEEEEEeeCCCCEEEEEeCCCeEEEEeCCC
Q 009614 389 SEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNY--------VTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (531)
Q Consensus 389 ~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~--------V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~ 460 (531)
..+.+|+++|+|.|... .+|.+.-.+..+.....-+..... -.++.|.| ++.+.++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEEeCCCc
Confidence 36779999998866655 677666555544221111111112 36889999 8887777 569998888644
Q ss_pred CeEEEe--------cCCCCceEEEEEccCCCEEEEEeCCCcEE
Q 009614 461 CQVVDY--------TDIREIVSAVCYCPDGKGGIVGTMTGNCR 495 (531)
Q Consensus 461 ~~~~~~--------~~~~~~v~~v~~spdg~~l~sgs~dg~I~ 495 (531)
...-.+ ..-=..+..|.+.|+|.+.++. ||.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 211111 0011357999999999877666 77754
No 319
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.70 E-value=0.21 Score=48.87 Aligned_cols=106 Identities=8% Similarity=-0.051 Sum_probs=63.0
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEEeecCCce--------EEEEEe---e-CCCCEEEEEeCCCeEEEEeCCCCeEE--
Q 009614 399 NGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYV--------TSVAFN---P-VDDNYFISGSIDGKVRIWEVRRCQVV-- 464 (531)
Q Consensus 399 ~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V--------~sv~fs---p-~d~~~l~sgs~Dg~I~Iwd~~~~~~~-- 464 (531)
++.+++|+.++.+...|+.+|+.+..+....+. .|.... . ..+..++.+..+..|.+.+ ++++.-
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~ 189 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGASYNV 189 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSCCCCC
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCCeEEE
Confidence 448999999999999999999999999743221 122211 0 1245677777777777766 344311
Q ss_pred ---EecCCCCc--e-EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 465 ---DYTDIREI--V-SAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 465 ---~~~~~~~~--v-~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
.+...... + ..-..+.|+.+ ++++.||.|.-+|..+|+.+.
T Consensus 190 ~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 190 TYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 01110000 0 00001234666 557889999999999998876
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.35 E-value=6.2 Score=37.34 Aligned_cols=95 Identities=9% Similarity=0.134 Sum_probs=56.5
Q ss_pred CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCC-----CeEEEEeCCCCeEEEecCCCC---ceEEEEE
Q 009614 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIRE---IVSAVCY 478 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~D-----g~I~Iwd~~~~~~~~~~~~~~---~v~~v~~ 478 (531)
..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-........ ....+.
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 260 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV- 260 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-
T ss_pred ceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-
Confidence 458889988776544322 11111122222 56777887765 469999999887654332211 122222
Q ss_pred ccCCCEEEEEeCC-----CcEEEEeCCCCeEEEE
Q 009614 479 CPDGKGGIVGTMT-----GNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 479 spdg~~l~sgs~d-----g~I~iwd~~~~~l~~~ 507 (531)
-++++++.|+.+ ..+.+||+.+++-...
T Consensus 261 -~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 261 -HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp -ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred -ECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 267788888754 4588999998876543
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.34 E-value=19 Score=41.26 Aligned_cols=218 Identities=12% Similarity=0.062 Sum_probs=102.1
Q ss_pred CCeEEeeecCCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccC------CCEEEEEeC-CCcEEEEEcccCccc
Q 009614 247 DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD------GQYLASGGE-DGTVRVWKVIEHERL 319 (531)
Q Consensus 247 g~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd------g~~Lasgs~-Dg~I~iWd~~~~~~~ 319 (531)
+.+++.+. .+.+.++++.... +.. ... ..-...|.|+++.|. ++++|.|.. |++|+|+++.+.+.+
T Consensus 523 ~~~vvva~-g~~l~~fel~~~~--L~~---~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 523 SSQVVVAV-GRALYYLQIHPQE--LRQ---ISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp SSEEEEEE-TTEEEEEEEETTE--EEE---EEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCEEEEEE-CCEEEEEEeeCCc--eee---ecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 34555554 5677777665321 111 111 112467999999863 469999996 999999999865544
Q ss_pred cceecCC-CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEe--CCccccccCcceeEeecCCCCeeEEEE
Q 009614 320 DGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVL--PPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (531)
Q Consensus 320 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~h~~~I~~l~~ 396 (531)
....... ..+..+.+..-.. ..+.+.+-.++.++.+ +.....+.... ..+.| ..++.-..+
T Consensus 596 ~~~~L~~~~~p~si~l~~~~~--------------~~~L~igl~dG~l~~~~~d~~tg~l~d~r-~~~LG-~~pv~L~~~ 659 (1158)
T 3ei3_A 596 HKEMLGGEIIPRSILMTTFES--------------SHYLLCALGDGALFYFGLNIETGLLSDRK-KVTLG-TQPTVLRTF 659 (1158)
T ss_dssp EEEECCSSCCEEEEEEEEETT--------------EEEEEEEETTSEEEEEEECTTTCCEEEEE-EEECC-SSCCEEEEE
T ss_pred EEEECCCCCCCcEEEEEEeCC--------------CcEEEEEeCCCeEEEEEEcCCCCccccce-eEEcC-CCceEEEEE
Confidence 3322211 1111221111110 1122233333333222 22111221111 11222 234433333
Q ss_pred cCCC--eEEEEeCCCcEEEEECCCCeEEEEeecCCceEEEEEeeCC-CCEEEEEeCCCeEEEEeCCCCe--EEEecCCCC
Q 009614 397 SKNG--FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVD-DNYFISGSIDGKVRIWEVRRCQ--VVDYTDIRE 471 (531)
Q Consensus 397 sp~~--~l~s~s~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d-~~~l~sgs~Dg~I~Iwd~~~~~--~~~~~~~~~ 471 (531)
...+ .+++++ +....+|.-+..-....+....--....|+... .+-++..+ ++.++|..+...+ .+.......
T Consensus 660 ~~~~~~~V~a~s-~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~ 737 (1158)
T 3ei3_A 660 RSLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYE 737 (1158)
T ss_dssp ESSSCEEEEEES-SSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSS
T ss_pred eeCCceeEEEEC-CCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCC
Confidence 3333 333333 444444543332222222222212333454311 23444433 4569998875432 223445567
Q ss_pred ceEEEEEccCCCEEEEEe
Q 009614 472 IVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs 489 (531)
.+..++++|+.+.++++.
T Consensus 738 Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 738 SPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EEEEEEEEGGGTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEE
Confidence 889999999888766654
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.29 E-value=3.6 Score=40.16 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=62.1
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEE--EEee----cCCceEEEEEeeCC----CCEEEEEeCC-----Ce
Q 009614 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCL--RVFS----HNNYVTSVAFNPVD----DNYFISGSID-----GK 452 (531)
Q Consensus 388 ~~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~~~~l--~~~~----h~~~V~sv~fsp~d----~~~l~sgs~D-----g~ 452 (531)
-.....|+|.|+|.|+.+..++.|++++ .++.. ..+. .......|+|+| + +.++++-... +.
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCCCCCccE
Confidence 4457799999999666667779999998 44322 1111 235689999999 6 4444443332 67
Q ss_pred EEEEeCCCCe-----E-EE-ec---CCCCceEEEEEccCCCEEEEEe
Q 009614 453 VRIWEVRRCQ-----V-VD-YT---DIREIVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 453 I~Iwd~~~~~-----~-~~-~~---~~~~~v~~v~~spdg~~l~sgs 489 (531)
|..|+..... . +. +. ........++|.|||.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 8888877532 1 22 22 1112346899999997666643
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.75 E-value=0.18 Score=49.35 Aligned_cols=113 Identities=5% Similarity=-0.023 Sum_probs=73.5
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEEeecC--CceEEEEEe--eCCCCEEEEE-eCCCeEEEEeCCCCeEEEecC-----
Q 009614 399 NGFLLSSSADKTVRLWQVGIDRCLRVFSHN--NYVTSVAFN--PVDDNYFISG-SIDGKVRIWEVRRCQVVDYTD----- 468 (531)
Q Consensus 399 ~~~l~s~s~Dg~V~lwdl~~~~~l~~~~h~--~~V~sv~fs--p~d~~~l~sg-s~Dg~I~Iwd~~~~~~~~~~~----- 468 (531)
.+.++.++.||.|.-+|..+|+.+..+... .++....-. +.++..++.. +.||.|..++..++...-...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 348899999999999999999999998744 233222111 1122333333 589999999998875431110
Q ss_pred CCCceEE---EEE-c----cCCCEEEEEeCCCcEEEEeCCCCeEEEEeeee
Q 009614 469 IREIVSA---VCY-C----PDGKGGIVGTMTGNCRFYDIKDNQLYQQNQIC 511 (531)
Q Consensus 469 ~~~~v~~---v~~-s----pdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~~ 511 (531)
...++.. ... . ..+..+++|+.+|++.-.|+.+|+++.++...
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1111211 000 0 14557899999999999999999999887643
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.62 E-value=8.9 Score=35.96 Aligned_cols=95 Identities=15% Similarity=0.240 Sum_probs=57.0
Q ss_pred CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCC-----CeEEEEeCCCCeEEEecCCCCc--eEEEEEc
Q 009614 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIREI--VSAVCYC 479 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~D-----g~I~Iwd~~~~~~~~~~~~~~~--v~~v~~s 479 (531)
..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-......... -.+++ .
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~ 249 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-A 249 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-E
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-E
Confidence 458899998877654432 11111122222 67788888764 3699999998765543322111 11122 2
Q ss_pred cCCCEEEEEeCCC-----cEEEEeCCCCeEEE
Q 009614 480 PDGKGGIVGTMTG-----NCRFYDIKDNQLYQ 506 (531)
Q Consensus 480 pdg~~l~sgs~dg-----~I~iwd~~~~~l~~ 506 (531)
.++++++.|+.++ .+.+||+.+++-..
T Consensus 250 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 250 VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred ECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 3777888888654 48999999887543
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.62 E-value=16 Score=38.81 Aligned_cols=116 Identities=4% Similarity=-0.070 Sum_probs=69.3
Q ss_pred CCeeEEEEcC-CC-eEEEEeCCC--cEEEEECCCCeEEEEee-cCCceEEEEEeeCCCCEEE-EEeCCCeEEEEeCCCCe
Q 009614 389 SEVLDLSWSK-NG-FLLSSSADK--TVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFI-SGSIDGKVRIWEVRRCQ 462 (531)
Q Consensus 389 ~~I~~l~~sp-~~-~l~s~s~Dg--~V~lwdl~~~~~l~~~~-h~~~V~sv~fsp~d~~~l~-sgs~Dg~I~Iwd~~~~~ 462 (531)
.....|++.| .| ++++-.... .|...++.......... .-...+.|++++ ..+.|+ +-+..+.|...++....
T Consensus 432 ~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~-~~~~LYw~D~~~~~I~~~~~dG~~ 510 (628)
T 4a0p_A 432 DRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDS-RLGKLFWADSDLRRIESSDLSGAN 510 (628)
T ss_dssp CCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeC-CCCEEEEEeCCCCEEEEEeCCCCc
Confidence 4577888988 56 444433222 56666665443333333 234578999999 555554 44556889999997654
Q ss_pred EEEec-CCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 463 VVDYT-DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 463 ~~~~~-~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
...+. ..-....+|+... +.++++=...+.|...|..+|+...
T Consensus 511 r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~ 554 (628)
T 4a0p_A 511 RIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRT 554 (628)
T ss_dssp CEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCE
T ss_pred eEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcE
Confidence 33322 2334467777654 4445555556778888887766443
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.48 E-value=8 Score=36.25 Aligned_cols=94 Identities=11% Similarity=0.143 Sum_probs=56.1
Q ss_pred CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCC-----CeEEEEeCCCCeEEEecCCCC---ceEEEEE
Q 009614 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIRE---IVSAVCY 478 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~D-----g~I~Iwd~~~~~~~~~~~~~~---~v~~v~~ 478 (531)
..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-........ ....+.
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 204 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL- 204 (301)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred ceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-
Confidence 358889988876554332 11111122222 56777777765 458999998876654322211 112222
Q ss_pred ccCCCEEEEEeCC-----CcEEEEeCCCCeEEE
Q 009614 479 CPDGKGGIVGTMT-----GNCRFYDIKDNQLYQ 506 (531)
Q Consensus 479 spdg~~l~sgs~d-----g~I~iwd~~~~~l~~ 506 (531)
-++++++.|+.+ ..+.+||+.+++...
T Consensus 205 -~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 205 -LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp -ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred -ECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 267777888764 468999999887654
No 327
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.07 E-value=5.1 Score=46.39 Aligned_cols=222 Identities=14% Similarity=0.204 Sum_probs=122.9
Q ss_pred CCeEEEEeCCCCcccccccccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCccccceecCCCCCeeEEEe
Q 009614 256 MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFT 335 (531)
Q Consensus 256 dg~I~vwd~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~ 335 (531)
...|.|-|+..+...... .+.+ . +.-.+|..+.||-=. ..++.|+|+.+...++.+..... .++|.
T Consensus 47 ~~~vvIidl~~~~~~~rr-----pi~A-d----sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~---VvfWk 112 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR-----PISA-D----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD---VTFWK 112 (1630)
T ss_pred CceEEEEECCCCCCcccc-----cccc-h----hhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC---ceEEE
Confidence 347888888865533111 1111 1 122356565555543 67899999999888777765443 45555
Q ss_pred ecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecC----CCCeeEEEEcCCC--eEEEEe---
Q 009614 336 INHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH----SSEVLDLSWSKNG--FLLSSS--- 406 (531)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~I~~l~~sp~~--~l~s~s--- 406 (531)
+-....+..+ .+..++.|+... ...|++.+..| ...|..-..+++. .+++|=
T Consensus 113 Wis~~~l~lV----------------T~~aVyHW~~~~---~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 113 WISLNTVALV----------------TDNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred ecCCCeeEEE----------------cCCeEEEeccCC---CCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccC
Confidence 5544433322 233466666533 23455555555 3456666777777 444432
Q ss_pred ---CCCcEEEEECCCCeEEEEeecCCceEEEEEe--eCCCCEEEEEeC---CCeEEEEeCCCC---------eEEEe-cC
Q 009614 407 ---ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFN--PVDDNYFISGSI---DGKVRIWEVRRC---------QVVDY-TD 468 (531)
Q Consensus 407 ---~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fs--p~d~~~l~sgs~---Dg~I~Iwd~~~~---------~~~~~-~~ 468 (531)
..|.+.+|.+..+.....-+|...-..+... +....+|+.+.. .++++|-++... +.+.. ..
T Consensus 174 ~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~ 253 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 253 (1630)
T ss_pred CCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCC
Confidence 3577888887655433222232222222211 101122222211 268999988543 11111 11
Q ss_pred ---CCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeee
Q 009614 469 ---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 469 ---~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~ 510 (531)
..+-..++..++.-..+..-+.-|.|++||+.++.++...++
T Consensus 254 ~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 254 PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (1630)
T ss_pred cccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccc
Confidence 123345677788777888899999999999999998765554
No 328
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.43 E-value=13 Score=35.86 Aligned_cols=240 Identities=11% Similarity=0.166 Sum_probs=137.3
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEccc--CCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc-
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAH--EGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE- 317 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H--~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~- 317 (531)
.-.+|..+.+|.-. ...+.|+|+....+ ++.| ...|.-=+|-.+. .|+-.+ +..|.-|++....
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~k----------lks~~~~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~ 138 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSK----------MKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ 138 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEE----------EEEEECSSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCC
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhh----------hcceecCCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCC
Confidence 35678888777764 68899999985543 2222 3466666775433 454444 3579999986532
Q ss_pred cccceecCC--CCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEE
Q 009614 318 RLDGFDVQD--TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (531)
Q Consensus 318 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~ 395 (531)
..+.+..+. .....+.+..+.....+.+..-.. -.+.-.+.+.+|.. ..+.-+.+.||.+....+.
T Consensus 139 P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~-------~~~~v~G~mQLYS~-----er~~sQ~ieGhaa~F~~~~ 206 (365)
T 2xzh_A 139 PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISA-------QQNRVVGAMQLYSV-----DRKVSQPIEGHAASFAQFK 206 (365)
T ss_dssp CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEE-------ETTEEEEEEEEEET-----TTTEEEEECCSEEEEEEEC
T ss_pred CceeeecchhcccceEEEEEECCCCCEEEEEeEec-------cCCccceeEEEEee-----cccccceeeeeeeeeEEEe
Confidence 222222221 123333444444333322210000 00011123333332 2334566777766555544
Q ss_pred EcCCC----eEEEEeC---CCcEEEEECCCC---e------EEEEe-e---cCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 396 WSKNG----FLLSSSA---DKTVRLWQVGID---R------CLRVF-S---HNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 396 ~sp~~----~l~s~s~---Dg~V~lwdl~~~---~------~l~~~-~---h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
...+. +++.+.. .+.++|-++... . .+..+ . ..+..-++..++ ....++.-+.-|.|++
T Consensus 207 ~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~ihl 285 (365)
T 2xzh_A 207 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHL 285 (365)
T ss_dssp CTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEE
T ss_pred cCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeCCcEEEE
Confidence 43221 3333332 257888888532 1 11222 1 356677899998 7778888899999999
Q ss_pred EeCCCCeEEEe-cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 456 WEVRRCQVVDY-TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 456 wd~~~~~~~~~-~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
||+.++.++.. .-..+.|...+.......++....+|.|.--.++...++.
T Consensus 286 yDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 286 YDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 337 (365)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHH
T ss_pred EEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEeh
Confidence 99999998843 3344566666666666677777789988888777766543
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.18 E-value=10 Score=36.60 Aligned_cols=57 Identities=18% Similarity=0.059 Sum_probs=31.5
Q ss_pred eEEEEeCCCCeEEE---ecCCCCceEEEEEccCCCEEEEEeCCC------cEEEEeCCCCeEEEEeee
Q 009614 452 KVRIWEVRRCQVVD---YTDIREIVSAVCYCPDGKGGIVGTMTG------NCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 452 ~I~Iwd~~~~~~~~---~~~~~~~v~~v~~spdg~~l~sgs~dg------~I~iwd~~~~~l~~~~~~ 510 (531)
.+.+||+.+.+-.. +......-.+ ...++++++.|+.++ .|.++++++++.++..+.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 57889988764332 2211222222 334788888888653 367779998888876553
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.41 E-value=13 Score=34.78 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=58.7
Q ss_pred eEEEEeCC------CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeC---------CCeEEEEeCCCCeE
Q 009614 401 FLLSSSAD------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSI---------DGKVRIWEVRRCQV 463 (531)
Q Consensus 401 ~l~s~s~D------g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~---------Dg~I~Iwd~~~~~~ 463 (531)
+++.|+.+ ..+.+||..+.+....-. ..-.-.+++.. ++.+++.|+. -..+.+||+.+.+-
T Consensus 104 iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 104 IYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp EEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred EEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 45555543 458889988876554422 11111122222 5677777764 34588999998865
Q ss_pred EEecCCCC---ceEEEEEccCCCEEEEEeCC-----CcEEEEeCCCCeEEE
Q 009614 464 VDYTDIRE---IVSAVCYCPDGKGGIVGTMT-----GNCRFYDIKDNQLYQ 506 (531)
Q Consensus 464 ~~~~~~~~---~v~~v~~spdg~~l~sgs~d-----g~I~iwd~~~~~l~~ 506 (531)
........ .-..+.+ ++++++.|+.+ ..+.+||+.+++-..
T Consensus 182 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 230 (306)
T 3ii7_A 182 TELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM 230 (306)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEE
T ss_pred EECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE
Confidence 54332221 1122222 67777777754 358999998876543
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.11 E-value=20 Score=36.05 Aligned_cols=238 Identities=11% Similarity=0.190 Sum_probs=138.6
Q ss_pred eeeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEccc--CCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc-
Q 009614 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAH--EGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE- 317 (531)
Q Consensus 241 ~~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H--~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~- 317 (531)
.-.+|..+.+|.-. ...+.|+|+....+ ++.| ...|.-=+|-.+. .|+-.+ +..|.-|++....
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~k----------lks~~~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~ 137 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSK----------MKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ 137 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEE----------EEEEECSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCC
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhh----------hcceecCCCceEEEecCCC-eEEEEc-CCeeEEecccCCCC
Confidence 45677777777654 68999999985443 2223 2456555665333 455443 4579999986532
Q ss_pred cccceecCC--CCCeeEEEeecCCcceeeee-ccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEE
Q 009614 318 RLDGFDVQD--TDPSCLYFTINHLSQLIPID-VDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (531)
Q Consensus 318 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l 394 (531)
..+.+..+. .....+.+..+.....+.+. .... .+...+.+-+|.. ..+.-+.+.||.+....+
T Consensus 138 P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~--------~~~v~G~mQLYS~-----er~~sQ~ieGhaa~F~~~ 204 (494)
T 1bpo_A 138 PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ--------QNRVVGAMQLYSV-----DRKVSQPIEGHAASFAQF 204 (494)
T ss_dssp CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEE--------TTEEEEEEEEEES-----TTCCEEEECCSEEEEEEE
T ss_pred chhheecchhcccceEEEEEECCCCCeEEEEeeccc--------CCcccceEEEeec-----cccccchheeeeeeeEEE
Confidence 222222221 12333344444433332211 1000 0011223333322 234456678887766666
Q ss_pred EEcCCC----eEEEEeCC---CcEEEEECCCC---------eEEEEe-e---cCCceEEEEEeeCCCCEEEEEeCCCeEE
Q 009614 395 SWSKNG----FLLSSSAD---KTVRLWQVGID---------RCLRVF-S---HNNYVTSVAFNPVDDNYFISGSIDGKVR 454 (531)
Q Consensus 395 ~~sp~~----~l~s~s~D---g~V~lwdl~~~---------~~l~~~-~---h~~~V~sv~fsp~d~~~l~sgs~Dg~I~ 454 (531)
....+. .++.+... +.++|-++... +.+..+ . ..+...++..++ ....++.-+.-|.|+
T Consensus 205 ~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G~i~ 283 (494)
T 1bpo_A 205 KMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIH 283 (494)
T ss_dssp ECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTSEEE
T ss_pred ecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCceEE
Confidence 554322 44444433 78999988543 111111 1 345677899999 777888889999999
Q ss_pred EEeCCCCeEEEe-cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEE
Q 009614 455 IWEVRRCQVVDY-TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLY 505 (531)
Q Consensus 455 Iwd~~~~~~~~~-~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~ 505 (531)
+||+.++.++.. .-..+.|...+.......++....+|.|.--.++...++
T Consensus 284 lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 284 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred EEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 999999998843 334456666666666667888788898887777776654
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.81 E-value=15 Score=39.47 Aligned_cols=107 Identities=21% Similarity=0.231 Sum_probs=63.3
Q ss_pred CC-eEEEEeCCC--cEEEEECCCCeEEEEee------cCCceEEEEEeeCCCCEEEEEeC--C-----CeEEEEeCCCCe
Q 009614 399 NG-FLLSSSADK--TVRLWQVGIDRCLRVFS------HNNYVTSVAFNPVDDNYFISGSI--D-----GKVRIWEVRRCQ 462 (531)
Q Consensus 399 ~~-~l~s~s~Dg--~V~lwdl~~~~~l~~~~------h~~~V~sv~fsp~d~~~l~sgs~--D-----g~I~Iwd~~~~~ 462 (531)
++ .++.|+.++ .+.+||..+......-. ......++.+...++.+++.|+. + ..+.+||+.+.+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 44 566665443 68999998877654331 11122335556522667777765 2 468999998876
Q ss_pred ------EEEecC---CCCceEEEEEccCCCEEEEEeCC--------CcEEEEeCCCCeEE
Q 009614 463 ------VVDYTD---IREIVSAVCYCPDGKGGIVGTMT--------GNCRFYDIKDNQLY 505 (531)
Q Consensus 463 ------~~~~~~---~~~~v~~v~~spdg~~l~sgs~d--------g~I~iwd~~~~~l~ 505 (531)
...... ....-.+++...++++++.|+.+ ..|.+||+.+++..
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred cccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 222211 11111233333447888888753 45999999988765
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.98 E-value=18 Score=34.03 Aligned_cols=94 Identities=13% Similarity=0.070 Sum_probs=55.6
Q ss_pred CcEEEEECCCCeEEEEeecC--CceEEEEEeeCCCCEEEEEeCC-----CeEEEEeCCCCeEEEecCCC---CceEEEEE
Q 009614 409 KTVRLWQVGIDRCLRVFSHN--NYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIR---EIVSAVCY 478 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~h~--~~V~sv~fsp~d~~~l~sgs~D-----g~I~Iwd~~~~~~~~~~~~~---~~v~~v~~ 478 (531)
..+.+||+.+.+....-... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.+-....... .....+.+
T Consensus 137 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 214 (308)
T 1zgk_A 137 NSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL 214 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE
Confidence 45888998887654432211 111122222 56777777764 45899999887655432211 11222233
Q ss_pred ccCCCEEEEEeCC-----CcEEEEeCCCCeEEE
Q 009614 479 CPDGKGGIVGTMT-----GNCRFYDIKDNQLYQ 506 (531)
Q Consensus 479 spdg~~l~sgs~d-----g~I~iwd~~~~~l~~ 506 (531)
++++++.|+.+ ..+.+||+.+++-..
T Consensus 215 --~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 215 --HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp --TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred --CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 67778888765 459999999876543
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.73 E-value=24 Score=34.24 Aligned_cols=246 Identities=15% Similarity=0.144 Sum_probs=116.3
Q ss_pred ccccceeeeCCCCeEEeeecCCeEEEEeCCCCccc-ccccccceEEcccCCCEEEEEEccC---CCEEEEE---eCCCcE
Q 009614 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE-LSSLYTGQEFLAHEGSILTMKFSLD---GQYLASG---GEDGTV 308 (531)
Q Consensus 236 ~~~~s~~fspdg~~lasgs~dg~I~vwd~~~~~~~-~~~~~~~~~l~~H~~~I~~l~fspd---g~~Lasg---s~Dg~I 308 (531)
.....++|.|+|.++++-...|+|++++....... +..+. ..+....+....|+|+|+ +.+|+.. ..++.|
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~--~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVP--GVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECT--TCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccC--ceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 34456899999997777655899999976533321 11000 112234567899999995 3344432 234455
Q ss_pred EEEEcccCc----cc---c----ceec-CCCCCeeEEEeecCCcceeeeeccccccccccccccCCCceEEEeCCccccc
Q 009614 309 RVWKVIEHE----RL---D----GFDV-QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL 376 (531)
Q Consensus 309 ~iWd~~~~~----~~---~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (531)
.-|.+..+. .+ . .+.. .......+.|.++. .++....+........ -.....+.++.+++...-.
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG--~Lyvt~Gd~~~~~~~q-d~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK--MLYAGTGESGDTGLSQ-DRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS--CEEEECBCTTCGGGTT-CTTCSTTCEEEECTTSSBC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC--CEEEEECCCCCCcccc-CCCCCCCEEEEEeCCCCcc
Confidence 555554321 00 0 0110 00111223332221 2221111111100000 0012234455554432110
Q ss_pred cCcce---eEe-ecCCCCeeEEEEcCCCeEEEEeC--CCcEEEEECCCCe------------------EEEEeecC-Cce
Q 009614 377 LEKPL---HEF-QGHSSEVLDLSWSKNGFLLSSSA--DKTVRLWQVGIDR------------------CLRVFSHN-NYV 431 (531)
Q Consensus 377 ~~~~~---~~~-~~h~~~I~~l~~sp~~~l~s~s~--Dg~V~lwdl~~~~------------------~l~~~~h~-~~V 431 (531)
...|. ..+ .+| .....++|+|+|.|.++-. |+.-.|--+..+. ++..+.+. ...
T Consensus 187 ~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 187 PGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp TTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred CCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence 11111 112 234 3467899999885555432 3322333222221 22333332 356
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeE----EE-ecCCCCceEEEEEccCCCEEEEEe
Q 009614 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV----VD-YTDIREIVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 432 ~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~----~~-~~~~~~~v~~v~~spdg~~l~sgs 489 (531)
..|+|. ++.+|+..-..+.|....+..... .. +.+....+..|+..|||.++++..
T Consensus 266 ~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 266 SGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 778886 466666666666676666655432 12 333446789999999997666544
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=86.45 E-value=11 Score=38.24 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=61.1
Q ss_pred CCCeeEEEEcCCCeEEEEeCCC-cEEEEECCCCeEEE--Eee-------cCCceEEEEEeeCC---CCEEEEEeC-----
Q 009614 388 SSEVLDLSWSKNGFLLSSSADK-TVRLWQVGIDRCLR--VFS-------HNNYVTSVAFNPVD---DNYFISGSI----- 449 (531)
Q Consensus 388 ~~~I~~l~~sp~~~l~s~s~Dg-~V~lwdl~~~~~l~--~~~-------h~~~V~sv~fsp~d---~~~l~sgs~----- 449 (531)
......|+|.|+|.|+.+...+ .|++++..++.... .+. ....+..|+|+| + +.+|+....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P-df~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP-DFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT-TTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC-CcCcCCEEEEEEeccccC
Confidence 4467899999999555556664 68888865554322 221 134567999999 4 444444332
Q ss_pred --------CCeEEEEeCCCC-------eEE-E-ec-CCCCceEEEEEccCCCEEEEEeC
Q 009614 450 --------DGKVRIWEVRRC-------QVV-D-YT-DIREIVSAVCYCPDGKGGIVGTM 490 (531)
Q Consensus 450 --------Dg~I~Iwd~~~~-------~~~-~-~~-~~~~~v~~v~~spdg~~l~sgs~ 490 (531)
...|.-|+.... +.+ . +. ........|+|.|||.+.++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 111 1 21 11235789999999987777553
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=85.76 E-value=21 Score=33.27 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=60.6
Q ss_pred CC-eEEEEeCCC-----cEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCC-------CeEEEEeCCCCeE
Q 009614 399 NG-FLLSSSADK-----TVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-------GKVRIWEVRRCQV 463 (531)
Q Consensus 399 ~~-~l~s~s~Dg-----~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~D-------g~I~Iwd~~~~~~ 463 (531)
++ .++.|+.++ .+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 44 556665443 47889988877654432 11111222222 56777777643 3588999998765
Q ss_pred EEecCCC---CceEEEEEccCCCEEEEEeCC-----CcEEEEeCCCCeEEE
Q 009614 464 VDYTDIR---EIVSAVCYCPDGKGGIVGTMT-----GNCRFYDIKDNQLYQ 506 (531)
Q Consensus 464 ~~~~~~~---~~v~~v~~spdg~~l~sgs~d-----g~I~iwd~~~~~l~~ 506 (531)
....... .....+. -++++++.|+.+ ..+.+||+.+++-..
T Consensus 186 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred EECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 5432211 1122222 267788888765 369999999877554
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=83.49 E-value=33 Score=39.92 Aligned_cols=238 Identities=11% Similarity=0.186 Sum_probs=124.8
Q ss_pred eeeCCCCeEEeeecCCeEEEEeCCCCcccccccccceEEccc--CCCEEEEEEccCCCEEEEEeCCCcEEEEEcccCc-c
Q 009614 242 TLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAH--EGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE-R 318 (531)
Q Consensus 242 ~fspdg~~lasgs~dg~I~vwd~~~~~~~~~~~~~~~~l~~H--~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~~~~~-~ 318 (531)
-.+|..+.+|.-. ..++.|+++....+. +.| ...|.-=+|-.+. .|+-.+ +..|.-|++.... .
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~kl----------ks~~~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P 138 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKM----------KAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP 138 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhh----------cccccCCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCcc
Confidence 4566666666654 688999999854432 222 2456555664333 344433 3579999996432 2
Q ss_pred ccceecCCC--CCeeEEEeecCCcceeee-eccccccccccccccCCCceEEEeCCccccccCcceeEeecCCCCeeEEE
Q 009614 319 LDGFDVQDT--DPSCLYFTINHLSQLIPI-DVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (531)
Q Consensus 319 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~l~ 395 (531)
.+.+..+.. ....+.+..+.....+.+ +.... .+...|.+-+|... .+..+.+.||.+....+.
T Consensus 139 ~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~--------~~~v~G~mQLyS~e-----r~~sQ~iegha~~F~~~~ 205 (1630)
T 1xi4_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ--------QNRVVGAMQLYSVD-----RKVSQPIEGHAASFAQFK 205 (1630)
T ss_pred HHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccC--------CCcccceeeeeecc-----cccchhhhHhHhhhheec
Confidence 222222211 122233333333322221 11000 01122333333322 223444566665554444
Q ss_pred EcCCC----eEEEEeC---CCcEEEEECCCC---e------EEEEe-e---cCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 396 WSKNG----FLLSSSA---DKTVRLWQVGID---R------CLRVF-S---HNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 396 ~sp~~----~l~s~s~---Dg~V~lwdl~~~---~------~l~~~-~---h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
...+. .+..+.. .+.+.|-++... . .+..+ . ..+...++..++ ....+..-+.-|.|.+
T Consensus 206 ~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~~~~ 284 (1630)
T 1xi4_A 206 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHL 284 (1630)
T ss_pred cCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCceEEE
Confidence 33211 2222222 267888888543 1 11111 1 244556788888 6777888889999999
Q ss_pred EeCCCCeEEEe-cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 009614 456 WEVRRCQVVDY-TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQ 506 (531)
Q Consensus 456 wd~~~~~~~~~-~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~ 506 (531)
||+.++.++-. .-....|...+.......++.....|.|.--.+....++.
T Consensus 285 ~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~ 336 (1630)
T 1xi4_A 285 YDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 336 (1630)
T ss_pred EecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence 99999988742 2233455545555554556666678877777776666554
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.40 E-value=53 Score=35.33 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=72.6
Q ss_pred CCeeEEEEcCCCeEEEEeCCCcEEEEECCC------CeEE--EEee-----cCCceEEEEEeeCCCCEEEEEeCCCeEEE
Q 009614 389 SEVLDLSWSKNGFLLSSSADKTVRLWQVGI------DRCL--RVFS-----HNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (531)
Q Consensus 389 ~~I~~l~~sp~~~l~s~s~Dg~V~lwdl~~------~~~l--~~~~-----h~~~V~sv~fsp~d~~~l~sgs~Dg~I~I 455 (531)
..|.++...+++.|..|+..+-|.++|..+ .... ..+. ....|.+|...+ ++++.+.++..+-|..
T Consensus 419 ~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~ 497 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDK 497 (758)
T ss_dssp SSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEE
T ss_pred ceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCCCcEE
Confidence 457778777778777788776788888542 1111 1222 234589999888 7777764444456888
Q ss_pred EeCCCCeEEEecCC----CCceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q 009614 456 WEVRRCQVVDYTDI----REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQL 504 (531)
Q Consensus 456 wd~~~~~~~~~~~~----~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l 504 (531)
+|..+++...+... ...+.++....+|.+.+ |+..| +..|+..+++.
T Consensus 498 ~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~ 548 (758)
T 3ott_A 498 INPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV-GFHGG-VMRINPKDESQ 548 (758)
T ss_dssp EETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE-EETTE-EEEECC--CCC
T ss_pred EeCCCCceEEecCCCcCCCcccceEEECCCCCEEE-EecCc-eEEEecCCCce
Confidence 99988877654321 23578888888887554 55555 77888766543
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=82.59 E-value=33 Score=32.42 Aligned_cols=98 Identities=6% Similarity=-0.017 Sum_probs=48.8
Q ss_pred EcCCC-eEEEEe-CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeCC--CeEEEEeCCCCeEEEecCCCC
Q 009614 396 WSKNG-FLLSSS-ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSID--GKVRIWEVRRCQVVDYTDIRE 471 (531)
Q Consensus 396 ~sp~~-~l~s~s-~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~D--g~I~Iwd~~~~~~~~~~~~~~ 471 (531)
+++.+ .|+-.+ ....|..-++..+.....+.. ... +.++| ++.+|+-.... ..|..-++.......+.. .
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~~~-~~~~P-~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~--~ 225 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--NCY-KPVVL-DDTNVYYMDVNRDNAIVHVNINNPNPVVLTE--A 225 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--CEE-EEEEE-ETTEEEEEEGGGTTEEEEECSSSCCCEECSC--S
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--Ccc-ceeee-cCCEEEEEEcCCCcEEEEEECCCCCeEEEeC--C
Confidence 34444 333333 356677777766655444432 222 23557 56666554432 356666666554443332 1
Q ss_pred ceEEEEEccCCCEEEEEeC--CCcEEEEeCCC
Q 009614 472 IVSAVCYCPDGKGGIVGTM--TGNCRFYDIKD 501 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~--dg~I~iwd~~~ 501 (531)
.+ ..|+|++.+|.-+.. .+.|..-++..
T Consensus 226 ~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 226 NI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp CE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred Cc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 22 336777777765432 24455555543
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=80.73 E-value=37 Score=31.77 Aligned_cols=103 Identities=6% Similarity=0.106 Sum_probs=60.8
Q ss_pred eEEEEeC-C-----CcEEEEECCCCeEEEEeecC--CceEEEEEeeCCCCEEEEEeCCC-----eEEEEeCCCCeEEEec
Q 009614 401 FLLSSSA-D-----KTVRLWQVGIDRCLRVFSHN--NYVTSVAFNPVDDNYFISGSIDG-----KVRIWEVRRCQVVDYT 467 (531)
Q Consensus 401 ~l~s~s~-D-----g~V~lwdl~~~~~l~~~~h~--~~V~sv~fsp~d~~~l~sgs~Dg-----~I~Iwd~~~~~~~~~~ 467 (531)
.++.|+. + ..+.+||..+.+....-... ..-.+++.. ++.+++.|+.++ .+.+||+.+.+-....
T Consensus 151 iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 151 VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp EEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred EEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 5556654 2 46899999887654433211 111122222 667888887654 5889999987655433
Q ss_pred CCC---CceEEEEEccCCCEEEEEeCCC--------------cEEEEeCCCCeEEEE
Q 009614 468 DIR---EIVSAVCYCPDGKGGIVGTMTG--------------NCRFYDIKDNQLYQQ 507 (531)
Q Consensus 468 ~~~---~~v~~v~~spdg~~l~sgs~dg--------------~I~iwd~~~~~l~~~ 507 (531)
... .....+. -++++++.|+.++ .+.+||+.+++-...
T Consensus 229 ~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 229 AFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 221 1122222 2677788887642 478999998876543
No 341
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=80.14 E-value=0.9 Score=28.78 Aligned_cols=20 Identities=40% Similarity=0.697 Sum_probs=16.3
Q ss_pred CCcccccccccccccccccC
Q 009614 4 VSNEEEEEQFFDTCEEISYV 23 (531)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~ 23 (531)
.|+|+||-+||||.+=|...
T Consensus 12 ~SdEDed~EfFDA~efITv~ 31 (47)
T 2rr3_B 12 MSDEDDENEFFDAPEIITMP 31 (47)
T ss_dssp SCCCCCSSCCBCCCSSCSSC
T ss_pred ccccccccccccccceeEcc
Confidence 46788899999999877654
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=78.01 E-value=45 Score=31.17 Aligned_cols=94 Identities=15% Similarity=0.183 Sum_probs=56.3
Q ss_pred CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeC-C-----CeEEEEeCCCCeEEEecCCCC---ceEEEE
Q 009614 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSI-D-----GKVRIWEVRRCQVVDYTDIRE---IVSAVC 477 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~-D-----g~I~Iwd~~~~~~~~~~~~~~---~v~~v~ 477 (531)
..+.+||..+.+....-. ..-.-.+++. - ++.+++.|+. + ..+.+||+.+.+-........ ...++.
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 194 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLS-H-MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV 194 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-E-TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEE-E-CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE
Confidence 458899998876544322 1111122222 2 6677777776 2 468999999876554332211 112222
Q ss_pred EccCCCEEEEEeCCC-----cEEEEeCCCCeEEE
Q 009614 478 YCPDGKGGIVGTMTG-----NCRFYDIKDNQLYQ 506 (531)
Q Consensus 478 ~spdg~~l~sgs~dg-----~I~iwd~~~~~l~~ 506 (531)
-++++++.|+.++ .+.+||+.+++-..
T Consensus 195 --~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 195 --HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp --ETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred --ECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 2777888888765 48999998886554
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=77.98 E-value=32 Score=32.91 Aligned_cols=96 Identities=5% Similarity=-0.039 Sum_probs=49.0
Q ss_pred CcEEEEECCCCeEEEEeecC--Cce-EEEEEeeCCCCEEEEEeC------CCeEEEEeC--CCCeEEEecCC---CCceE
Q 009614 409 KTVRLWQVGIDRCLRVFSHN--NYV-TSVAFNPVDDNYFISGSI------DGKVRIWEV--RRCQVVDYTDI---REIVS 474 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~h~--~~V-~sv~fsp~d~~~l~sgs~------Dg~I~Iwd~--~~~~~~~~~~~---~~~v~ 474 (531)
..+.+||..+.+....-... ..- .+++.. ++.+++.|+. ...+.+||+ .+.+-...... .....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 46889999887655443211 111 233332 5667777664 235777877 55444332221 11111
Q ss_pred EEEEccCCCEEEEEeCC----------------------CcEEEEeCCCCeEEE
Q 009614 475 AVCYCPDGKGGIVGTMT----------------------GNCRFYDIKDNQLYQ 506 (531)
Q Consensus 475 ~v~~spdg~~l~sgs~d----------------------g~I~iwd~~~~~l~~ 506 (531)
..+...++++++.|+.+ ..+.+||+.+++-..
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~ 299 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK 299 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceee
Confidence 12233467777887742 257899998776543
No 344
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=77.26 E-value=47 Score=30.94 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=58.8
Q ss_pred eEEEEeCCCcEEEEECCC---------CeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC-------Ce-E
Q 009614 401 FLLSSSADKTVRLWQVGI---------DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR-------CQ-V 463 (531)
Q Consensus 401 ~l~s~s~Dg~V~lwdl~~---------~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~-------~~-~ 463 (531)
.++..+..|.+..+.... |...-.+.....|..+...+ ++.+++..+..|.++...+.. ++ .
T Consensus 129 ~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv 207 (276)
T 3no0_A 129 HILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWN-GEPYLLVITAKGRVKKISHEEIPKTNRGVKGT 207 (276)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCE
T ss_pred EEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHcccCCCCCcce
Confidence 667777777777766421 22222233456677766555 567888889999998887643 11 2
Q ss_pred EEecCCCCceEEEEEccCCCEEEEEeCCCcEEE--EeCCC
Q 009614 464 VDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRF--YDIKD 501 (531)
Q Consensus 464 ~~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~i--wd~~~ 501 (531)
..+ ...+.+..+....+...++..+.+|.+.. +++..
T Consensus 208 ~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 208 EVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 222 33344544443334456777777888777 77654
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.32 E-value=37 Score=37.96 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=30.8
Q ss_pred CceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE
Q 009614 429 NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (531)
Q Consensus 429 ~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~ 465 (531)
..+.+++..+ +..++++-+.|+++|||++.+++++.
T Consensus 236 ~~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 236 NTIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp TCEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred ceEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEe
Confidence 3567777777 78899999999999999999998874
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=74.35 E-value=5.2 Score=41.50 Aligned_cols=102 Identities=9% Similarity=0.126 Sum_probs=71.5
Q ss_pred cEEEEECCC----C-eEEEEeecCCceEEEEEeeCCCCEEEEEe-CCCeEEEEeCCC------Ce-------EEEecCCC
Q 009614 410 TVRLWQVGI----D-RCLRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRR------CQ-------VVDYTDIR 470 (531)
Q Consensus 410 ~V~lwdl~~----~-~~l~~~~h~~~V~sv~fsp~d~~~l~sgs-~Dg~I~Iwd~~~------~~-------~~~~~~~~ 470 (531)
.|.+.|.+. + ..+..+.-......+.++| |++++++++ .+.+|.|+|+.. .+ ++......
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 467777765 2 2334444556667889999 898887766 578999999874 12 12333345
Q ss_pred CceEEEEEccCCCEEEEEeCCCcEEEEeCCCC----------eEEEEeeeee
Q 009614 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDN----------QLYQQNQICL 512 (531)
Q Consensus 471 ~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~----------~l~~~~~~~~ 512 (531)
-.....+|.++|....+-..|..|.-|++... .++++..++.
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeecccccc
Confidence 56788999999966666778999999999754 4666665543
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=72.95 E-value=10 Score=39.42 Aligned_cols=120 Identities=13% Similarity=0.129 Sum_probs=77.8
Q ss_pred CCeeEEEEcCCC-e-EEEEeCCCcEEEEECCCC------eE-------EEEeecCCceEEEEEeeCCCCEEEEEeCCCeE
Q 009614 389 SEVLDLSWSKNG-F-LLSSSADKTVRLWQVGID------RC-------LRVFSHNNYVTSVAFNPVDDNYFISGSIDGKV 453 (531)
Q Consensus 389 ~~I~~l~~sp~~-~-l~s~s~Dg~V~lwdl~~~------~~-------l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I 453 (531)
.....+..+|+| + ++++-.+.+|.++|+..- +. .....-.-...-.+|.+ +++...+.-.|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeeecceE
Confidence 345677889999 4 445557899999998741 11 22222344567789999 88766777789999
Q ss_pred EEEeCCCC----------eEEEecCCCCceEEEEE------ccCCCEEEEEeC---CCc----------EEEEeCCCCe-
Q 009614 454 RIWEVRRC----------QVVDYTDIREIVSAVCY------CPDGKGGIVGTM---TGN----------CRFYDIKDNQ- 503 (531)
Q Consensus 454 ~Iwd~~~~----------~~~~~~~~~~~v~~v~~------spdg~~l~sgs~---dg~----------I~iwd~~~~~- 503 (531)
..|++... .++...+..-.+-.+.- .|||++|++... |.. -.++|+...+
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGdkM 481 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGDEM 481 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSSSC
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCCce
Confidence 99998753 34443333334444444 579999999764 432 4888887543
Q ss_pred -EEEEee
Q 009614 504 -LYQQNQ 509 (531)
Q Consensus 504 -l~~~~~ 509 (531)
++....
T Consensus 482 ~lv~D~P 488 (638)
T 3sbq_A 482 KLVHDGP 488 (638)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 444443
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.82 E-value=1.2e+02 Score=33.68 Aligned_cols=37 Identities=11% Similarity=0.346 Sum_probs=31.9
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee
Q 009614 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS 426 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~ 426 (531)
.+.+++..++. ++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777777776 99999999999999999999998764
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=72.59 E-value=65 Score=30.35 Aligned_cols=100 Identities=11% Similarity=0.079 Sum_probs=56.0
Q ss_pred EEcCCC-eEEEEe----CCCcEEEEECCCCeEEEEeecCCceEEEEEeeCCCCEEEEEeC-CCeEEEEeCCCCeEEEecC
Q 009614 395 SWSKNG-FLLSSS----ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSI-DGKVRIWEVRRCQVVDYTD 468 (531)
Q Consensus 395 ~~sp~~-~l~s~s----~Dg~V~lwdl~~~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~-Dg~I~Iwd~~~~~~~~~~~ 468 (531)
.|++++ .|+-.. ....|..-++......+...+.. ..|+| +++.|+-.+. ...|.+.++..+....+..
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~ 184 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQSEALFYD 184 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEE-ETTEEEEECTTTCCEEEEETTTTEEEEEEC
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeE-ECCEEEEEeCCCceEEEEECCCCCEEEEeC
Confidence 455666 555443 34456666666544444433432 45678 6666665544 6788888888776544432
Q ss_pred CCCceEEEEEccCCCEEEEEeCCC--cEEEEeCCCC
Q 009614 469 IREIVSAVCYCPDGKGGIVGTMTG--NCRFYDIKDN 502 (531)
Q Consensus 469 ~~~~v~~v~~spdg~~l~sgs~dg--~I~iwd~~~~ 502 (531)
.... ..+.|++.+|+-....+ .|..-++...
T Consensus 185 --~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 185 --CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp --SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred --CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 2222 34568888877665432 4544455443
No 350
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=65.64 E-value=87 Score=29.15 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=58.6
Q ss_pred eEEEEeCC-------CcEEEEECCCCeEEEEeecCCce--EEEEEeeCCCCEEEEEeCC------CeEEEEeCCCCeEEE
Q 009614 401 FLLSSSAD-------KTVRLWQVGIDRCLRVFSHNNYV--TSVAFNPVDDNYFISGSID------GKVRIWEVRRCQVVD 465 (531)
Q Consensus 401 ~l~s~s~D-------g~V~lwdl~~~~~l~~~~h~~~V--~sv~fsp~d~~~l~sgs~D------g~I~Iwd~~~~~~~~ 465 (531)
.++.|+.+ ..+.+||..+.+....-..+.+. .+++. . ++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 112 iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 189 (318)
T 2woz_A 112 IYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD 189 (318)
T ss_dssp EEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEE
T ss_pred EEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEE
Confidence 55556543 34788999887765443211111 12222 2 67777777642 359999999876554
Q ss_pred ecCCCC--ceEEEEEccCCCEEEEEeCCC-----cEEEEeCCCCeEEE
Q 009614 466 YTDIRE--IVSAVCYCPDGKGGIVGTMTG-----NCRFYDIKDNQLYQ 506 (531)
Q Consensus 466 ~~~~~~--~v~~v~~spdg~~l~sgs~dg-----~I~iwd~~~~~l~~ 506 (531)
...... .-.+++. -++++++.|+.++ .+.+||+.+++-..
T Consensus 190 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 190 LAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred CCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 322211 1112222 3677778887543 47889998876543
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=63.90 E-value=1.1e+02 Score=30.80 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=61.6
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCe---EEEEee----c------CCceEEEEEeeCC----CCEEEEEeC
Q 009614 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDR---CLRVFS----H------NNYVTSVAFNPVD----DNYFISGSI 449 (531)
Q Consensus 389 ~~I~~l~~sp~~--~l~s~s~Dg~V~lwdl~~~~---~l~~~~----h------~~~V~sv~fsp~d----~~~l~sgs~ 449 (531)
...+.|+|.|++ .|+.+...|.|++++..... .+..+. . ......|+|+| + +.++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P-~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHP-NYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECT-THHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCC-CCcCCCEEEEEEeC
Confidence 456799999998 48888889999999754321 222221 1 35678999999 4 344443332
Q ss_pred --C----------CeEEEEeCCC----------CeEE-Ee--cCCCCceEEEEEccCCCEEEEEeCCC
Q 009614 450 --D----------GKVRIWEVRR----------CQVV-DY--TDIREIVSAVCYCPDGKGGIVGTMTG 492 (531)
Q Consensus 450 --D----------g~I~Iwd~~~----------~~~~-~~--~~~~~~v~~v~~spdg~~l~sgs~dg 492 (531)
+ ..|.-|.+.. .+++ .. .........|+|.|||.+.++.+..+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1343355432 2232 22 12233468899999998777766543
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=59.65 E-value=42 Score=35.96 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=63.6
Q ss_pred CC-eEEEEeCC------CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCCC--eEEEEeCCCCeEEEec
Q 009614 399 NG-FLLSSSAD------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDG--KVRIWEVRRCQVVDYT 467 (531)
Q Consensus 399 ~~-~l~s~s~D------g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~Dg--~I~Iwd~~~~~~~~~~ 467 (531)
++ .++.|+.+ ..+.+||..+.+....-. ..-.-.+++... ++.+++.|+.++ .+.+||..+.+-....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 45 55555533 347889998876554322 111112333323 678888887655 6999999988755433
Q ss_pred C------CCCceEEEEEccC-CCEEEEEeC--C-----CcEEEEeCCCCe
Q 009614 468 D------IREIVSAVCYCPD-GKGGIVGTM--T-----GNCRFYDIKDNQ 503 (531)
Q Consensus 468 ~------~~~~v~~v~~spd-g~~l~sgs~--d-----g~I~iwd~~~~~ 503 (531)
. ......++.+..+ +++++.|+. + +.+.+||+.+++
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 2 2222344555555 677788876 2 358999998887
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=56.18 E-value=1.3e+02 Score=27.96 Aligned_cols=96 Identities=10% Similarity=0.138 Sum_probs=56.0
Q ss_pred CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEeCC-----CeEEEEeCCCCeEEEecCCCCc--eEEEEEc
Q 009614 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIREI--VSAVCYC 479 (531)
Q Consensus 409 g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs~D-----g~I~Iwd~~~~~~~~~~~~~~~--v~~v~~s 479 (531)
..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-......... -.+++ .
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~ 251 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV-S 251 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-E
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-E
Confidence 458999999887654432 11111222222 56777777654 3578899988765543222111 11222 2
Q ss_pred cCCCEEEEEeCC--------------CcEEEEeCCCCeEEEE
Q 009614 480 PDGKGGIVGTMT--------------GNCRFYDIKDNQLYQQ 507 (531)
Q Consensus 480 pdg~~l~sgs~d--------------g~I~iwd~~~~~l~~~ 507 (531)
.++++++.|+.+ ..+.+||+.+.+-..-
T Consensus 252 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 252 LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 367777887754 3588999998876543
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=53.32 E-value=1.6e+02 Score=28.10 Aligned_cols=100 Identities=14% Similarity=0.090 Sum_probs=60.5
Q ss_pred eEEEEeCCCcEEEEECC--C---------CeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCC-------e
Q 009614 401 FLLSSSADKTVRLWQVG--I---------DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC-------Q 462 (531)
Q Consensus 401 ~l~s~s~Dg~V~lwdl~--~---------~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~-------~ 462 (531)
.|+..+..|.+..+.+. . |...-.+.....|.++...+ .+.+++..+..|.++.-.+..- +
T Consensus 159 ~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~ 237 (327)
T 3uc1_A 159 DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGK 237 (327)
T ss_dssp EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred EEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCC
Confidence 66677777777766655 2 11111233556677777665 5678889999999988775421 1
Q ss_pred -EE--EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 463 -VV--DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 463 -~~--~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
+. .+....+.+..+....+...++..+.+|.+.-+++..
T Consensus 238 G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 238 GVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred cEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 11 2222233455554444555677778888877777654
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=52.78 E-value=1.5e+02 Score=28.92 Aligned_cols=89 Identities=9% Similarity=0.215 Sum_probs=58.9
Q ss_pred cEEEEECCCC--eEEEEee-------cCCceEEEEEe---eC---CCCEE-EEEeCCCeEEEEeCCCCeEEEecC----C
Q 009614 410 TVRLWQVGID--RCLRVFS-------HNNYVTSVAFN---PV---DDNYF-ISGSIDGKVRIWEVRRCQVVDYTD----I 469 (531)
Q Consensus 410 ~V~lwdl~~~--~~l~~~~-------h~~~V~sv~fs---p~---d~~~l-~sgs~Dg~I~Iwd~~~~~~~~~~~----~ 469 (531)
.|.+||+.++ +.++.+. ....+..+.+. |. ++.++ ++-+...-|.|+|+.+++...... .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5888999999 8888875 24568889988 21 12343 344457789999999887553221 0
Q ss_pred ---------------CCceEEEEEccC----CCEEEEEeCCCcEEEEeC
Q 009614 470 ---------------REIVSAVCYCPD----GKGGIVGTMTGNCRFYDI 499 (531)
Q Consensus 470 ---------------~~~v~~v~~spd----g~~l~sgs~dg~I~iwd~ 499 (531)
...+..|+++|+ ++.|.-....+ -++|.+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V 251 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSV 251 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEE
Confidence 236788888887 67776666554 234444
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=51.57 E-value=1.1e+02 Score=29.47 Aligned_cols=107 Identities=9% Similarity=-0.035 Sum_probs=54.9
Q ss_pred CCeeEEEEcC--CCeEEEEeCCC----cEEEEECCCCeEEEEee---------------cCCceEEEEEeeCC-CCEEEE
Q 009614 389 SEVLDLSWSK--NGFLLSSSADK----TVRLWQVGIDRCLRVFS---------------HNNYVTSVAFNPVD-DNYFIS 446 (531)
Q Consensus 389 ~~I~~l~~sp--~~~l~s~s~Dg----~V~lwdl~~~~~l~~~~---------------h~~~V~sv~fsp~d-~~~l~s 446 (531)
..|.+|++.| .+.|+.++..+ .|...+ ..++.-..+. ....|.+|++.|.+ ...+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4588999988 44555555444 333332 2222211111 11257889998744 566666
Q ss_pred EeCCCeEEEEeCCCC--eEEE-ec----------------CCCCceEEEEEccC-CCEEEEEeCCCcEEE
Q 009614 447 GSIDGKVRIWEVRRC--QVVD-YT----------------DIREIVSAVCYCPD-GKGGIVGTMTGNCRF 496 (531)
Q Consensus 447 gs~Dg~I~Iwd~~~~--~~~~-~~----------------~~~~~v~~v~~spd-g~~l~sgs~dg~I~i 496 (531)
+...+.|...+=... +.+. .. .....+.+|.+.|. ...|+++..++.|..
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFE 203 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEE
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEE
Confidence 666666555432222 2221 10 11235788999883 445555554544433
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.84 E-value=31 Score=39.40 Aligned_cols=39 Identities=8% Similarity=0.113 Sum_probs=33.5
Q ss_pred ceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeee
Q 009614 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 472 ~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~ 510 (531)
.+.+++..++..++++-+.|+++|||++.+++++.+..+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 455567778889999999999999999999999988664
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=49.79 E-value=2.1e+02 Score=28.65 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=35.4
Q ss_pred ccccceeeeCCCC-eEEeeecCCeEEEEeCCCCc--ccccccccceEEc----ccCCCEEEEEEccC
Q 009614 236 DRHGSATLKPGDH-ELTLGQRMRRVRVHPVKKQS--RELSSLYTGQEFL----AHEGSILTMKFSLD 295 (531)
Q Consensus 236 ~~~~s~~fspdg~-~lasgs~dg~I~vwd~~~~~--~~~~~~~~~~~l~----~H~~~I~~l~fspd 295 (531)
+....++|.|+|. .|+++.+.|.|++++..... ..+..+... ... +.......|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~-~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKL-VQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTT-BCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcce-eccCccccCCCcceeeEeCCC
Confidence 4445689999996 56666788999999754321 111111100 011 12567899999996
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=37.40 E-value=2.8e+02 Score=26.52 Aligned_cols=98 Identities=8% Similarity=-0.057 Sum_probs=50.7
Q ss_pred CCeEEEEeCCCcEEEEECCC-C-eEEE--EeecCCceEEEEEeeCCCCEEEEEeCCC----eEEEEeCC--CCeEEEec-
Q 009614 399 NGFLLSSSADKTVRLWQVGI-D-RCLR--VFSHNNYVTSVAFNPVDDNYFISGSIDG----KVRIWEVR--RCQVVDYT- 467 (531)
Q Consensus 399 ~~~l~s~s~Dg~V~lwdl~~-~-~~l~--~~~h~~~V~sv~fsp~d~~~l~sgs~Dg----~I~Iwd~~--~~~~~~~~- 467 (531)
.+.|+.++..| +.+++... + .... .......|.+|+++|.+...|.++...| .|...+=. +.+.+...
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPP 100 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccc
Confidence 34777787777 44444332 2 2221 1123467999999985556566665555 44443211 12222110
Q ss_pred ---C--------CCCceEEEEEcc-C-CCEEEEEeCCCcEEEE
Q 009614 468 ---D--------IREIVSAVCYCP-D-GKGGIVGTMTGNCRFY 497 (531)
Q Consensus 468 ---~--------~~~~v~~v~~sp-d-g~~l~sgs~dg~I~iw 497 (531)
. ....|.++++.| + ...|.+++..+.|...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 0 112577899987 2 4556666655555444
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=37.05 E-value=44 Score=35.81 Aligned_cols=34 Identities=15% Similarity=0.516 Sum_probs=27.9
Q ss_pred CceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCCeEEE
Q 009614 429 NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (531)
Q Consensus 429 ~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~~~~~ 465 (531)
..|.++.+ +..++++-+.|.++|+|++.+++++.
T Consensus 222 ~~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 222 SVISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp CEEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred ceEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEE
Confidence 34565554 57899999999999999999999774
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.01 E-value=35 Score=39.03 Aligned_cols=37 Identities=11% Similarity=0.346 Sum_probs=30.6
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEee
Q 009614 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS 426 (531)
Q Consensus 390 ~I~~l~~sp~~-~l~s~s~Dg~V~lwdl~~~~~l~~~~ 426 (531)
.+.+++..++. ++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44555666665 89999999999999999999998864
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.93 E-value=1e+02 Score=32.19 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=40.7
Q ss_pred eEEEEEeeCCCCEEEEEeCC------------CeEEEEeCCCCeEEEe--cCCCCceEEEEEccCCCEEEEEe
Q 009614 431 VTSVAFNPVDDNYFISGSID------------GKVRIWEVRRCQVVDY--TDIREIVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 431 V~sv~fsp~d~~~l~sgs~D------------g~I~Iwd~~~~~~~~~--~~~~~~v~~v~~spdg~~l~sgs 489 (531)
.-.|+|+| .+++++.-..+ ..+.+.+..++++..+ ......++.++|+||++.|.+.-
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 45689999 88876654322 2466667777776643 33456899999999999887763
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=33.26 E-value=45 Score=35.72 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=31.1
Q ss_pred CceEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEEEEeee
Q 009614 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKDNQLYQQNQI 510 (531)
Q Consensus 471 ~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~~~l~~~~~~ 510 (531)
..|.++.+ +..+|++-+.|.++|+|++.+++++....+
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34554444 578999999999999999999999988776
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=32.81 E-value=1.4e+02 Score=30.97 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=42.7
Q ss_pred CceEEEEEeeCCCCEEEEEeC------------CCeEEEEeCCCCeEEEecC--CCCceEEEEEccCCCEEEEEeC
Q 009614 429 NYVTSVAFNPVDDNYFISGSI------------DGKVRIWEVRRCQVVDYTD--IREIVSAVCYCPDGKGGIVGTM 490 (531)
Q Consensus 429 ~~V~sv~fsp~d~~~l~sgs~------------Dg~I~Iwd~~~~~~~~~~~--~~~~v~~v~~spdg~~l~sgs~ 490 (531)
.....|.|.+ ++.+.+.... ...|..++..++++..+.. ....++.++|+||++.|.++-.
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 3457799999 8887773211 1267777877787765432 2457899999999999887643
No 365
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.69 E-value=3.6e+02 Score=26.26 Aligned_cols=100 Identities=10% Similarity=0.177 Sum_probs=60.0
Q ss_pred CCeeEEEEcCC----C-eEEEEeCCCcEEEEECC-----C---CeEEEEeecC---CceEEEEEeeCCCCEEEEEeCCCe
Q 009614 389 SEVLDLSWSKN----G-FLLSSSADKTVRLWQVG-----I---DRCLRVFSHN---NYVTSVAFNPVDDNYFISGSIDGK 452 (531)
Q Consensus 389 ~~I~~l~~sp~----~-~l~s~s~Dg~V~lwdl~-----~---~~~l~~~~h~---~~V~sv~fsp~d~~~l~sgs~Dg~ 452 (531)
..|..|+.+|+ + .|+-....+. ++|.+. . ...++.+... ..-..+++.+.++.++++--....
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a 298 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQ 298 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSE
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCe
Confidence 46889999987 5 5665554442 444432 1 2233334322 334456776437878888888899
Q ss_pred EEEEeCCC-C------eEEEecCCCCceEEEEEccCCCEEEEEe
Q 009614 453 VRIWEVRR-C------QVVDYTDIREIVSAVCYCPDGKGGIVGT 489 (531)
Q Consensus 453 I~Iwd~~~-~------~~~~~~~~~~~v~~v~~spdg~~l~sgs 489 (531)
|..|+..+ . .++.....-..+..+.+.++|.+.+...
T Consensus 299 I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 299 VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 99999986 1 2222222334577888877776555554
No 366
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=32.66 E-value=3.1e+02 Score=25.58 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=66.0
Q ss_pred CCeeEEEEcCC-CeEEEEeCCCcEEEEECCC---------CeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeC
Q 009614 389 SEVLDLSWSKN-GFLLSSSADKTVRLWQVGI---------DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEV 458 (531)
Q Consensus 389 ~~I~~l~~sp~-~~l~s~s~Dg~V~lwdl~~---------~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~ 458 (531)
+.+..+..... ..++..+.+|.+..+.... |...-.+.....|.++...+ ++..++..+..|.++-.++
T Consensus 146 d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 146 DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPR-GDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCC-SSCEEEEEETTSEEEEECG
T ss_pred CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEec-CCCEEEEEEcCCceEEEEH
Confidence 44544444333 3777888888888877632 11112233556777776554 5567888899999988876
Q ss_pred CCC-------e-EE--EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 459 RRC-------Q-VV--DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 459 ~~~-------~-~~--~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
..- + .. .+....+.+..+....+...|+..+.+|.+.-+.+..
T Consensus 225 ~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 225 AEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp GGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred HHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 321 1 11 2333334555544434445677777788777666654
No 367
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=30.59 E-value=5.2e+02 Score=27.49 Aligned_cols=204 Identities=7% Similarity=0.021 Sum_probs=97.4
Q ss_pred EEEEE-EccCCCEEEEE-e----CCCcEEEEEcccCccccc-eecCCCCC--------eeEEEeecCCcceeeeeccccc
Q 009614 287 ILTMK-FSLDGQYLASG-G----EDGTVRVWKVIEHERLDG-FDVQDTDP--------SCLYFTINHLSQLIPIDVDKEK 351 (531)
Q Consensus 287 I~~l~-fspdg~~Lasg-s----~Dg~I~iWd~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 351 (531)
...+. ++|++++++.+ + +-.+|+++|+.+++.+.. +. +.... ..+.|. +....++........
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEE-CCCEEEEEeCCCCCC
Confidence 34455 88999877664 2 234799999999987642 22 11111 233454 222222222222210
Q ss_pred cccccccccCCCceEEEeCCccccccCcceeEeecCCCCe-eEEEEcCCC-e-----EEEEeCC---CcEEEEECCC--C
Q 009614 352 IDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV-LDLSWSKNG-F-----LLSSSAD---KTVRLWQVGI--D 419 (531)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I-~~l~~sp~~-~-----l~s~s~D---g~V~lwdl~~--~ 419 (531)
.-.......++.|...+-.... ...+.+....+ .....++++ + +++.+.+ ..+.+.+... +
T Consensus 209 -----~~~~~~~~~v~~~~~Gt~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 209 -----ITSSLYPNSLYIWKRGESIEKA--KKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL 281 (711)
T ss_dssp -----BCTTSSBCEEEEEETTSCGGGC--EEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC
T ss_pred -----cCcCCCCCEEEEEECCCChHHC--eEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC
Confidence 1111223344444433222111 22233322222 233344444 2 4444423 3355556543 3
Q ss_pred eEEEEeecCCceEEEEEeeCCCCEEEEE----------eCCCeEEEEeCCCC----------eEEEecCCCCceEEEEEc
Q 009614 420 RCLRVFSHNNYVTSVAFNPVDDNYFISG----------SIDGKVRIWEVRRC----------QVVDYTDIREIVSAVCYC 479 (531)
Q Consensus 420 ~~l~~~~h~~~V~sv~fsp~d~~~l~sg----------s~Dg~I~Iwd~~~~----------~~~~~~~~~~~v~~v~~s 479 (531)
+......... . .+..++ ++.+++.. ...+.|.+.++.+. +.+-.......+..+.|.
T Consensus 282 ~~~~l~~~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 358 (711)
T 4hvt_A 282 KLQKINMPSD-A-TLQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT 358 (711)
T ss_dssp EEEECCSCTT-C-EEEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC
T ss_pred cceEeecCCc-c-eEeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE
Confidence 3233322222 1 133444 55555532 24567888887653 122223334467788888
Q ss_pred cCCCEEEEEeCCCc--EEEEeCCCCe
Q 009614 480 PDGKGGIVGTMTGN--CRFYDIKDNQ 503 (531)
Q Consensus 480 pdg~~l~sgs~dg~--I~iwd~~~~~ 503 (531)
.+ .++++...++. +.++++.+++
T Consensus 359 ~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 359 KD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp SS-CEEEEEEETTEEEEEEECEETTE
T ss_pred CC-EEEEEEEECCEEEEEEEECCCCc
Confidence 76 56777777775 6777776664
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=29.57 E-value=3.7e+02 Score=25.43 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=67.4
Q ss_pred eEEEEeCCCcEEEEECCCC-------eEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCC--CCeE-------E
Q 009614 401 FLLSSSADKTVRLWQVGID-------RCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR--RCQV-------V 464 (531)
Q Consensus 401 ~l~s~s~Dg~V~lwdl~~~-------~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~--~~~~-------~ 464 (531)
+++..+.+|.|+--.+..- .....+...+.+..+.... ....++..+..|.+..+.+. .-.. +
T Consensus 111 ~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv 189 (327)
T 3uc1_A 111 YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRATSGV 189 (327)
T ss_dssp EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCE
T ss_pred EEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcCCCCe
Confidence 9999999999999876531 1112233455666666655 55678888889998888776 3111 1
Q ss_pred Ee--cCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 465 DY--TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 465 ~~--~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
.. ....+.|.++...+++.+|+..+..|.++.-.+..
T Consensus 190 ~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 190 QGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp ESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 11 12345677777766777899999999988877654
No 369
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=28.90 E-value=2.1e+02 Score=29.06 Aligned_cols=65 Identities=14% Similarity=0.210 Sum_probs=42.9
Q ss_pred CeeEEEEcCC----C---eEEEEeCCCcEEEEECC-CCe-------EE---EEeecCCceEEEEEeeCCCCEEEEEeCCC
Q 009614 390 EVLDLSWSKN----G---FLLSSSADKTVRLWQVG-IDR-------CL---RVFSHNNYVTSVAFNPVDDNYFISGSIDG 451 (531)
Q Consensus 390 ~I~~l~~sp~----~---~l~s~s~Dg~V~lwdl~-~~~-------~l---~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg 451 (531)
..+.|+...- + .+..|+.+|.|.=.-+. .+. .+ ..+....+|..|.+++ +..+|++++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-TTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-CCCEEEEEECCe
Confidence 4677666532 4 67888999987544332 211 12 2223567899999999 889999999887
Q ss_pred eEEE
Q 009614 452 KVRI 455 (531)
Q Consensus 452 ~I~I 455 (531)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=28.68 E-value=2.1e+02 Score=29.75 Aligned_cols=59 Identities=19% Similarity=0.220 Sum_probs=39.8
Q ss_pred CCeeEEEEcCCCeEEEEeCC-------------CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEEe
Q 009614 389 SEVLDLSWSKNGFLLSSSAD-------------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGS 448 (531)
Q Consensus 389 ~~I~~l~~sp~~~l~s~s~D-------------g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sgs 448 (531)
.....|.|.++|.|..+... ..|..++..+++....+. ....++.++|+| |++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP-D~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC-CCCEEEEEE
Confidence 34678999999944443221 256667777777665554 235789999999 888776653
No 371
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=22.22 E-value=5.3e+02 Score=24.81 Aligned_cols=69 Identities=12% Similarity=-0.027 Sum_probs=39.7
Q ss_pred eCCCCeEEeeecCCeEEEEeCCCCcccccc--cccceEEcccCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 009614 244 KPGDHELTLGQRMRRVRVHPVKKQSRELSS--LYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (531)
Q Consensus 244 spdg~~lasgs~dg~I~vwd~~~~~~~~~~--~~~~~~l~~H~~~I~~l~fspdg~~Lasgs~Dg~I~iWd~ 313 (531)
=|+...+++.+.+|.|+--.+..-...-.. ......++ ....+..+........|+..+..|.+.-+..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~ 74 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPV 74 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEG
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEH
Confidence 367788999999999997654321100000 01111222 2445666666656667777778887765554
No 372
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.28 E-value=1.7e+02 Score=29.80 Aligned_cols=62 Identities=16% Similarity=0.111 Sum_probs=36.7
Q ss_pred eEEeeecCCeEEEEeCCCCcc-cccccccceEEc--ccCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 009614 249 ELTLGQRMRRVRVHPVKKQSR-ELSSLYTGQEFL--AHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (531)
Q Consensus 249 ~lasgs~dg~I~vwd~~~~~~-~~~~~~~~~~l~--~H~~~I~~l~fspdg~~Lasgs~Dg~I~i 310 (531)
.+..|+.+|+|+=.-+..... .........++. ....+|..|.++++..+|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 345689999875443322111 000111112233 23578999999999999999999887765
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=21.01 E-value=2.6e+02 Score=29.15 Aligned_cols=57 Identities=19% Similarity=0.233 Sum_probs=38.2
Q ss_pred CeeEEEEcCCCeEEEEeCC-------------CcEEEEECCCCeEEEEee--cCCceEEEEEeeCCCCEEEEE
Q 009614 390 EVLDLSWSKNGFLLSSSAD-------------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISG 447 (531)
Q Consensus 390 ~I~~l~~sp~~~l~s~s~D-------------g~V~lwdl~~~~~l~~~~--h~~~V~sv~fsp~d~~~l~sg 447 (531)
..-.|+|+|.|.|+.+... ..+.+.+..+++..+.+. ....++.++|+| |++.|.+.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEEE
Confidence 3456899999954444322 235556666677655554 557899999999 88777664
No 374
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=20.95 E-value=4.6e+02 Score=23.63 Aligned_cols=100 Identities=10% Similarity=0.059 Sum_probs=60.8
Q ss_pred CeEEEEeCCCcEEEEE---CCC----CeEEE---EeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCC-------Ce
Q 009614 400 GFLLSSSADKTVRLWQ---VGI----DRCLR---VFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR-------CQ 462 (531)
Q Consensus 400 ~~l~s~s~Dg~V~lwd---l~~----~~~l~---~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~-------~~ 462 (531)
..|+..+..|.+.-+. +.. |..+. .+.....|.++.... ++.+|+..+..|.++...+.. +.
T Consensus 45 ~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~-~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~ 123 (256)
T 1zvt_A 45 QPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMES-DDQKLLMASDAGYGFVCTFNDLVARNRAGK 123 (256)
T ss_dssp SCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCC-TTCEEEEEBTTSEEEEEEGGGGCCCSTTCE
T ss_pred CEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeC-CCCEEEEEeCCCeEEEeEHHHhcccCcCce
Confidence 3666667777755544 321 22211 123456677774433 566788889999999987743 22
Q ss_pred EE-EecCCCCceEEEEEc-cCCCEEEEEeCCCcEEEEeCCC
Q 009614 463 VV-DYTDIREIVSAVCYC-PDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 463 ~~-~~~~~~~~v~~v~~s-pdg~~l~sgs~dg~I~iwd~~~ 501 (531)
.. .+.. .+.+..+... .++..|+..+.+|.+..+.+..
T Consensus 124 ~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 124 ALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp ECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 22 2332 3445555555 3456788999999998888764
No 375
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=20.33 E-value=5.3e+02 Score=24.02 Aligned_cols=100 Identities=16% Similarity=0.180 Sum_probs=66.2
Q ss_pred CeEEEEeCCCcEEEEECCC-------CeEEEEeecCCceEEEEEeeCCCCEEEEEeCCCeEEEEeCCCC-------eEE-
Q 009614 400 GFLLSSSADKTVRLWQVGI-------DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC-------QVV- 464 (531)
Q Consensus 400 ~~l~s~s~Dg~V~lwdl~~-------~~~l~~~~h~~~V~sv~fsp~d~~~l~sgs~Dg~I~Iwd~~~~-------~~~- 464 (531)
.+|+..+..|.++...+.. +.....+...+.+..+.... ....++..+.+|.+..+....- +-+
T Consensus 115 ~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~ 193 (312)
T 1suu_A 115 AYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVF-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVC 193 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEE
T ss_pred CEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeE
Confidence 3788889999988887742 22222233456666666654 5567888889999988876531 111
Q ss_pred --EecCCCCceEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q 009614 465 --DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKD 501 (531)
Q Consensus 465 --~~~~~~~~v~~v~~spdg~~l~sgs~dg~I~iwd~~~ 501 (531)
.+. ..+.|.++..-.++..|++.+..|..+...+..
T Consensus 194 ~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 194 GMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred eEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 232 245566666655667788899999988888764
Done!