BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009618
(530 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 572 bits (1473), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 353/480 (73%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 1 KLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 60
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 61 PAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 120
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 121 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 180
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP G+P GV NVV G+A +G+ L ++P VRK++FTGST +G++L
Sbjct: 181 ASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 240
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+
Sbjct: 241 MEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGV 300
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y++FA+ +A+ L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H
Sbjct: 301 YDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 360
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY +
Sbjct: 361 ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYAR 420
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 421 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/479 (55%), Positives = 352/479 (73%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 2 LNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP 61
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AEE
Sbjct: 62 AWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEE 121
Query: 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226
KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 227 EFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
TP G+P GV NVV G+A +G+ L ++P VRK++FTGST +G++LM
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+Y
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY 301
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
++FA+ +A+ L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H
Sbjct: 302 DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHE 361
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY + +
Sbjct: 362 RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 421
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 422 LSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/478 (55%), Positives = 352/478 (73%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
++D LLR Q IGG+W A T EV +PATGE + V MG ET AI +A A+
Sbjct: 5 MKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA 64
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
W TA ER+ LR+W+DL++A+ ++L ++T EQGKPL EA GE+ Y A FIE++AEE
Sbjct: 65 GWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEE 124
Query: 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226
KRV G+ +P ++R+ V+K+P+GV AITPWNFP AMI RKVGPALA GC +VVKP+
Sbjct: 125 GKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPA 184
Query: 227 EFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
E TP G+P GV++VV+G+ IG + ++P VRK++FTGSTAVG+ LM
Sbjct: 185 ESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLM 244
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A +A TVKK++LELGGNAP IVFDDADL+ AV GA+A+K+RN+GQTCVC NR V E +Y
Sbjct: 245 AQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVY 304
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
+ FAD + AV LKVG G G GPLIN+AA++KVE+ + DA++KGA ++ GG+RH+
Sbjct: 305 DAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHA 364
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
LG F+EPTVL+ VK +M V++EE FGP+APL F +EEE + +ANDT GLAAY+++ +
Sbjct: 365 LGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD 424
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ R WRV+EALEYG+VG+N GLIS EVAPFGGVKQSGLGREGS YG+D+++ IKY+C+
Sbjct: 425 IGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 541 bits (1395), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/477 (57%), Positives = 352/477 (73%), Gaps = 2/477 (0%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
L+D LL++Q L+ G+WIDA DG T++V NPA G VI V + K+AI ++ A +
Sbjct: 25 LKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS 84
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
W+ TA ER+ LRKW+DL++A+ +++ ++T EQGKPL EA GEV Y A FIE++AEE
Sbjct: 85 GWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEE 144
Query: 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226
AKRVYG+ IPA +RL V++QPVGV AITPWNFP AMITRK PALA GCT++V+P+
Sbjct: 145 AKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPA 204
Query: 227 EFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
+ TP GIP GV+ +V G A +IG L ++ VRK++FTGST VG+ LM
Sbjct: 205 DLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM 264
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A A T+K++SLELGGNAP IVFDDADL+ AV+GA+ +K+RN+GQTCVCANR+ VQ G+Y
Sbjct: 265 AQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVY 324
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
+KFA+ + VK LKVG+G GVV GP+I + A+ KV+ +EDAVSKGAK++ GG+
Sbjct: 325 DKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-- 382
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
LG F+EP +L+ V S+MLV++EE FGP+APL F TEEE I ANDT GLAAY +T N
Sbjct: 383 LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTEN 442
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
R RVSEALEYG+VG N GLIS EVAPFGGVKQSGLGREGSKYG++E+LE KY+C
Sbjct: 443 FSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYIC 499
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 521 bits (1341), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/482 (56%), Positives = 354/482 (73%), Gaps = 6/482 (1%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 8 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWR 65
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 66 EVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 125
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 126 VYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 185
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 186 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 245
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI+
Sbjct: 246 HHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
Query: 347 EKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH
Sbjct: 306 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 366 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 425
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G
Sbjct: 426 DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485
Query: 526 DM 527
+
Sbjct: 486 GL 487
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 517 bits (1331), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/482 (56%), Positives = 353/482 (73%), Gaps = 6/482 (1%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 8 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWR 65
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 66 EVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 125
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 126 VYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 185
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 186 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 245
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQT VC+N+ LVQ GI+
Sbjct: 246 HHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIH 305
Query: 347 EKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH
Sbjct: 306 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 366 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 425
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G
Sbjct: 426 DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485
Query: 526 DM 527
+
Sbjct: 486 GL 487
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/474 (40%), Positives = 283/474 (59%), Gaps = 7/474 (1%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTA 113
Q I G+W + + V NP+T E+I ++ ++ + A+ +A AF N+WS +
Sbjct: 9 QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG- 172
A R+ LR + K+ +L T++ GKP EAV ++D A E++A +A+ + G
Sbjct: 69 AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGK 128
Query: 173 EIIPATLPDRRL--FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
+ P TLP R VL+QP+GV G I+PWN+PL M T K+ PALA GCT V+KPSE
Sbjct: 129 QKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
G+PPGV+N++ G PD G L++ P V KI FTGS+A G K+MA AA
Sbjct: 189 VTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAA 248
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
VK V+LELGG +P +VF+D D++ V + F +GQ C +R+LV E I +F
Sbjct: 249 QLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFV 308
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLG 408
D K KN+K+ D F EG GP+I+K +K+ F+ A S+GA +L GG R H
Sbjct: 309 DKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKK 368
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+ EPT+++++ + M + +EEVFGPV + F +E+EAI +ANDT GLAA +F+N+L+
Sbjct: 369 GYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLE 428
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
R R+++ALE G V VN AP+GG+K+SG GRE ++G+ +L IK V
Sbjct: 429 RCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQV 482
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 345 bits (884), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 210/473 (44%), Positives = 273/473 (57%), Gaps = 7/473 (1%)
Query: 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAI---SSAFDAFNSWSKLTA 113
G IGG+W D+ G T +V+NPATG VIA V ++ A+ SA N W T
Sbjct: 14 GYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET- 72
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
R K L D L ++EE+G+++ E GKP KEA GEVDY A F ++ A+ +
Sbjct: 73 --RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSH 130
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXX 233
IP D V +PVGV G I PWNFP+ I +K+ ALA GC V+KP+ TP
Sbjct: 131 TIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTX 190
Query: 234 XXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
+P G VN+V G A IG L V ++FTGST VG+KL+ A V
Sbjct: 191 IAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQV 250
Query: 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 353
KK++LELGGNAP IVFDDADL A + +A KFR GQTCVCANR+ V E + + F
Sbjct: 251 KKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKL 310
Query: 354 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFY 412
++ V VGDG +G+ GPLINK +KV+ ++DA+ KGA ++ G + LG F+
Sbjct: 311 AERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFF 370
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PTV+ V E +EE FGP+ P F+TEEE I NDT GLA+Y+FT + +R R
Sbjct: 371 PPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQR 430
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
V+ L +G VG N G T APFGG K SG+GREG G+ EF+E + V G
Sbjct: 431 VAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTVPRG 483
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/476 (37%), Positives = 281/476 (59%), Gaps = 6/476 (1%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSK 110
L + I G+W+++ + T ++ NP EVI VS ++ + AI +A AF S WS+
Sbjct: 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQ 90
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170
TA R K +R D + H+E L +L TL+ GK L+E+ ++D ++A A +
Sbjct: 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKD 150
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
GE+I + +PD ++K+PVGV ITPWN+PL + K+ PALA GC++V+KPSE TP
Sbjct: 151 GGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITP 210
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
G P G +N+++G ++GD + +V ++FTG GK +M AA
Sbjct: 211 LTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
V ++LELGG P I+FDDAD +AV+ AL + ++GQ C +R+LVQ I +KF
Sbjct: 271 NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFE 330
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM- 409
A VK +K+G+GF GP+I+ K+E++++ A ++GA + +GG+R
Sbjct: 331 QALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDL 390
Query: 410 ---TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
F+EPTV++N + M + +EEVFGPV + F+TE+EAI +AND+ GLA +F+ +
Sbjct: 391 KDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKD 450
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + RV+ L+ G V +N+ AP+GG KQSG+GRE K G++E+L K++
Sbjct: 451 IGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHI 506
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 186/466 (39%), Positives = 265/466 (56%), Gaps = 9/466 (1%)
Query: 60 GGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKG 119
G WID V NPAT VI+ + ++ + AI +A A W L A ER+
Sbjct: 20 GDAWID--------VVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASW 71
Query: 120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 179
LRK + E+ LI E GK + A EV + A +I++ AE A+R GEII +
Sbjct: 72 LRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 131
Query: 180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXX 239
P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFTP
Sbjct: 132 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI 191
Query: 240 XXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299
G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA AA + KV LE
Sbjct: 192 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLE 251
Query: 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359
LGG AP IV DDADL +AV + ++ NSGQ C CA RV VQ+GIY++F + +A++
Sbjct: 252 LGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 311
Query: 360 LKVGD-GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS 418
++ G+ + GPLIN AALE+VE V AV +GA+V LGG+ +Y PT+L
Sbjct: 312 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLL 371
Query: 419 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 478
+V+ EM + EE FGPV P++ F T EEAI MAND++ GL + I+T NL + + L+
Sbjct: 372 DVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLK 431
Query: 479 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 184/466 (39%), Positives = 264/466 (56%), Gaps = 9/466 (1%)
Query: 60 GGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKG 119
G WID V NPAT VI+ + ++ + AI +A A W L A ER+
Sbjct: 20 GDAWID--------VVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASW 71
Query: 120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 179
LRK + E+ LI E GK + A EV + A +I++ AE A+R GEII +
Sbjct: 72 LRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 131
Query: 180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXX 239
P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFTP
Sbjct: 132 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI 191
Query: 240 XXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299
G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA AA + KV LE
Sbjct: 192 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLE 251
Query: 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359
LGG AP IV DDADL +AV + ++ NSGQ C CA RV VQ+GIY++F + +A++
Sbjct: 252 LGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 311
Query: 360 LKVGD-GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS 418
++ G+ + GPLIN AALE+VE V AV +GA+V GG+ +Y PT+L
Sbjct: 312 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLL 371
Query: 419 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 478
+V+ EM + EE FGPV P++ F T E+AI MAND++ GL + I+T NL + + L+
Sbjct: 372 DVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLK 431
Query: 479 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 328 bits (842), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/466 (39%), Positives = 264/466 (56%), Gaps = 9/466 (1%)
Query: 60 GGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKG 119
G WID V NPAT VI+ + ++ + AI +A A W L A ER+
Sbjct: 20 GDAWID--------VVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASW 71
Query: 120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 179
LRK + E+ LI E GK + A EV + A +I++ AE A+R GEII +
Sbjct: 72 LRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 131
Query: 180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXX 239
P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFTP
Sbjct: 132 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI 191
Query: 240 XXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299
G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA AA + KV LE
Sbjct: 192 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLE 251
Query: 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359
LGG AP IV DDADL +AV + ++ NSGQ C CA RV VQ+GIY++F + +A++
Sbjct: 252 LGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 311
Query: 360 LKVGD-GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS 418
++ G+ + GPLIN AALE+VE V AV +GA+V GG+ +Y PT+L
Sbjct: 312 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLL 371
Query: 419 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 478
+V+ EM + EE FGPV P++ F T E+AI MAND++ GL + I+T NL + + L+
Sbjct: 372 DVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLK 431
Query: 479 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 324 bits (830), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 189/477 (39%), Positives = 278/477 (58%), Gaps = 10/477 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSK 110
Q I G W K + V NPAT +I ++ ++ A+++A A W+
Sbjct: 9 QLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWAT 68
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170
+ A R++ LR + K EL +L +++ GKPL EA ++D A E+YA+ A+++
Sbjct: 69 ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKL 128
Query: 171 YG-EIIPATLP--DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+ P +LP + VL++P+GV G ITPWN+P+ M T KV PALA GC ++KPSE
Sbjct: 129 DARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSE 188
Query: 228 FTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
G+PPGV+N++ G P+ G L T P V K+ FTGS+A G K+M
Sbjct: 189 LASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMT 248
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
AA VK VSLELGG +P +VF+D DL+ A A+ F +GQ C +R+++ E I
Sbjct: 249 AAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIAT 308
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--H 405
+F + K +KN+K+ D EG GP++++ EK+ FV +A S+GA +L GG R H
Sbjct: 309 EFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEH 368
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
F EPT++++V + M + REEVFGPV + F TEEEAI +ANDT GL A + +N
Sbjct: 369 LKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISN 428
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+L+R RV++A + G+V VN AP+GGVK+SG GRE ++G+D +L +K V
Sbjct: 429 DLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQV 485
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 321 bits (823), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 266/477 (55%), Gaps = 10/477 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKL 111
T+ I +W ++ G+ V NPATGE + V + A+ +A AF+ W ++
Sbjct: 19 TKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRM 78
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGA--KFIEFYAEEAKR 169
A+ER + L K DL+ + L + +L GKP +A +D K + +YA A +
Sbjct: 79 DASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAF-YIDLQGVIKTLRYYAGWADK 137
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
++G IP D F +P+GV G I PWNFPL M T K+ PAL CG TVV+KP+E T
Sbjct: 138 IHGMTIPVD-GDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQT 196
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P G PPGVVN++ G P G A+ + + KI FTGST VGK L+ A
Sbjct: 197 PLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGK-LIQEA 255
Query: 290 AG--TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
AG +K+V+LELGG +P I+F DADL+ AV A F N GQ C +R+ V+E IYE
Sbjct: 256 AGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYE 315
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
+F + K VG F QGP I+K K+ ++ V++GAK+ GG+
Sbjct: 316 EFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGR 375
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
F EPTV SNV +M +++EE+FGPV +L FKT +E I AN+++ GL A +FTN++
Sbjct: 376 KGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDI 435
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ VS A++ G V +N +PFGG K SG GRE ++G+ E+ E+K V +
Sbjct: 436 NKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTV 492
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 321 bits (822), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 271/495 (54%), Gaps = 10/495 (2%)
Query: 37 SVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD 96
S GM + L + + T+ I +W ++ GKT V NPAT E I V ++
Sbjct: 3 SSGMPDLPAPLTNIKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDK 62
Query: 97 AISSAFDAF---NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGE 152
A+ +A +AF + W + A+ER + + K DL+ + L L ++ GK A + +
Sbjct: 63 AVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMD 122
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF--VLKQPVGVAGAITPWNFPLAMITRK 210
+DY K + + A A ++ G IP D F +P+GV G I PWN P+ ++ K
Sbjct: 123 LDYCIKALRYCAGWADKIQGRTIPV---DGEFFSYTRHEPIGVCGLIFPWNAPMILLACK 179
Query: 211 VGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQV 270
+GPAL CG TV+VKP+E TP G PPGVVN+V G P G A+ + V
Sbjct: 180 IGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 239
Query: 271 RKITFTGSTAVGKKLM-AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329
K+ FTGST VGK + A A +K+V+LELG PCIVF DADL+ AV A F N
Sbjct: 240 DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQ 299
Query: 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389
GQ+C+ A+++ V+E IY++F + K G+ GV GP INKA K+ +E
Sbjct: 300 GQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIE 359
Query: 390 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449
+GAK+ GG F +PTV SNV +M +++EE+FGPV ++ FK+ +E I
Sbjct: 360 SGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIK 419
Query: 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGS 509
AN+T GL A +FT +L + VS AL+ G V VN L ++ +P GG K SG GRE
Sbjct: 420 RANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMG 479
Query: 510 KYGMDEFLEIKYVCL 524
+YG+ E+ E+K V +
Sbjct: 480 EYGIHEYTEVKTVTM 494
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 315 bits (806), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 269/497 (54%), Gaps = 14/497 (2%)
Query: 37 SVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD 96
S M V L + T+ I +W + GK V NPAT E + V ++
Sbjct: 3 SSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDK 62
Query: 97 AISSAFDAF---NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153
A+ +A AF + W + A+ER + L K DL+ + L + + GK A +
Sbjct: 63 AVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAY-LM 121
Query: 154 DYGA--KFIEFYAEEAKRVYGEIIPATLPDRRLFVL--KQPVGVAGAITPWNFPLAMITR 209
D G K + + A A ++ G IP D F +PVGV G I PWNFPL M
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178
Query: 210 KVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQ 269
K+GPAL+CG TVVVKP+E TP G PPGVVN+V G P G A+ +
Sbjct: 179 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMD 238
Query: 270 VRKITFTGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 327
V K+ FTGST VG KL+ AAG +K+VSLELGG +PCIVF DADL+ AV A F
Sbjct: 239 VDKVAFTGSTEVG-KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFY 297
Query: 328 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 387
+ GQ C+ A+R+ V+E IY++F + K +G+ GV QGP I+K EK+
Sbjct: 298 HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDL 357
Query: 388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 447
+E +GAK+ GG F +PTV S+V +M +++EE+FGPV ++ FK+ ++
Sbjct: 358 IESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDV 417
Query: 448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 507
I AN+T GL+A IFTN++ + VS AL+ G V VN + + PFGG K SG GRE
Sbjct: 418 IKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRE 477
Query: 508 GSKYGMDEFLEIKYVCL 524
+YG E+ E+K V +
Sbjct: 478 LGEYGFHEYTEVKTVTI 494
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 311 bits (798), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 268/477 (56%), Gaps = 10/477 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSK 110
Q + G+W G+ L V NP T I + ++ A+++A A W++
Sbjct: 26 QLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWAR 85
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170
A R+K LR ++ K EL +L L+ GKP EA ++D A E++A++A+ +
Sbjct: 86 APGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEAL 145
Query: 171 -YGEIIPATLPDR--RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+ P +LP + + ++P+GV G ITPWN+PL M T K+ PALA GCT V+KPSE
Sbjct: 146 DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSE 205
Query: 228 FTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
G+P GV+N+V G PD G L P V K+ FTGS GKK+MA
Sbjct: 206 LASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMA 265
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
AA VK V+LELGG +P +VFDD D++ AV L F +GQ C +R+L+ I +
Sbjct: 266 SAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAK 325
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--H 405
KF + KN+KV D EG GP++++ EK++ F+ +A S+GA +L GG R H
Sbjct: 326 KFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAH 385
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
F EPT+++++ + M + REEVFGPV + F TE+EAI +ANDT GLA + +
Sbjct: 386 LEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISG 445
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ +R R+SE ++ G + VN AP+GG K+SG GRE + G+D +L +K V
Sbjct: 446 DRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQV 502
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 311 bits (796), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 265/473 (56%), Gaps = 4/473 (0%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
IGG+++ + + T+++ +P+TG+VI + + ++A+ A A +W+KLTA R
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ 75
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR + + + +K L ++ EQGK L A EVD A FI++ + A + G+I+P+
Sbjct: 76 NMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPS 135
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
D ++++ K P GV IT WNFPLA+ RK+GPAL G T+V+KP++ TP
Sbjct: 136 DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELG 195
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297
G+P GV+NV+ G +G L SP + IT TGST GK++ +A + V
Sbjct: 196 RIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVM 255
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357
LELGG AP +V DDADL+ A AL +F N GQ C C R+ V +Y++F F V
Sbjct: 256 LELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315
Query: 358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL----GMTFYE 413
K LKVGD GP N+ ++ ++ V +A+ +GA V GG+ ++ G +YE
Sbjct: 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYE 375
Query: 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473
PTVL +VK + +V EE FGP+ P++ + E+AI ND+ GL+AY+ T + +
Sbjct: 376 PTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQA 435
Query: 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526
LE G V +N G+ G KQSG G E K+G++++LE K V + +
Sbjct: 436 ISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 279/477 (58%), Gaps = 10/477 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSK 110
Q I G+W K + NP+T +I ++ ++ A+ +A A + WS
Sbjct: 9 QLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSA 68
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170
+ + R++ LR + K+ELG+L +++ GKPL+EA+ ++D E+YA A+ +
Sbjct: 69 ASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEEL 128
Query: 171 YG-EIIPATLP--DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+ P +LP + ++LK+P+GV ITPWN+P M T K+ PALA GC ++KPSE
Sbjct: 129 DSKQKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSE 188
Query: 228 FTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
G+P GV+N+V G + G +L + P V KI+FTGS+A G K+M
Sbjct: 189 LASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMT 248
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
AA VK VSLELGG +P +VF+D DL+ + F +GQ C +R++V E I
Sbjct: 249 TAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAV 308
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--H 405
+F D K +N+K+ D EG GP++++A +KV + A S+GA +L GGRR H
Sbjct: 309 EFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEH 368
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
F EPT++++V + M + REEVFGPV + F TEEEAI++ANDT+ GL + + +N
Sbjct: 369 LKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSN 428
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+L+R R+S+AL+ G+V +N S AP+GG+K+SG GRE ++G++ +L +K V
Sbjct: 429 DLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 264/476 (55%), Gaps = 9/476 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
IGG++++A G T E NPA GEV+A V ++ + A+ SA + W+ +TA +RS+
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ D+L +EL L TL+ GKPL E ++ GA +E+YA + GE IP
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 130
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
++ ++P+GV I WN+P+ + K PALA G ++ KPSE TP
Sbjct: 131 R-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA-AGTVKKV 296
G+P GV NV+ G+ ++G L P + KI+FTG T+ GKK+MA A + ++K+V
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
++ELGG +P I+F DADL+ A + A+ A F +SGQ C RV + +F +
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 309
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFY 412
V+ +++GD E GPL++ +E V ++E ++ A++L GG R + G +
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PTV ++ + +M + REE+FGPV +L + E+EAI ANDT GLAA + T +L R R
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGD 526
LE G+ +N S P GG KQSG+GRE + + IK V LGD
Sbjct: 430 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 264/476 (55%), Gaps = 9/476 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
IGG++++A G T E NPA GEV+A V ++ + A+ SA + W+ +TA +RS+
Sbjct: 10 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 69
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ D+L +EL L TL+ GKPL E ++ GA +E+YA + GE IP
Sbjct: 70 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 129
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
++ ++P+GV I WN+P+ + K PALA G ++ KPSE TP
Sbjct: 130 R-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 188
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA-AGTVKKV 296
G+P GV NV+ G+ ++G L P + KI+FTG T+ GKK+MA A + ++K+V
Sbjct: 189 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 248
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
++ELGG +P I+F DADL+ A + A+ A F +SGQ C RV + +F +
Sbjct: 249 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 308
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFY 412
V+ +++GD E GPL++ +E V ++E ++ A++L GG R + G +
Sbjct: 309 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 368
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PTV ++ + +M + REE+FGPV +L + E+EAI ANDT GLAA + T +L R R
Sbjct: 369 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 428
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGD 526
LE G+ +N S P GG KQSG+GRE + + IK V LGD
Sbjct: 429 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 484
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 308 bits (789), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 272/483 (56%), Gaps = 8/483 (1%)
Query: 48 RDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-- 105
R+ + R Q IGG+W + + + NPAT E+I ++ ++ A+ +A A
Sbjct: 17 RNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIAR 76
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+ W T A+R+K LR ++ K L L +L+ GK L E+ ++D A E+YA
Sbjct: 77 DDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAG 136
Query: 166 EAKRVYGE-IIPATL--PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
A+ + + P L + +VL++P+GV G ITPWN+PL M KV PALA GC +
Sbjct: 137 LAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAI 196
Query: 223 VKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+KPSE G+P G +N++ G P+ G L + P V KI+FTGS G
Sbjct: 197 LKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTG 256
Query: 283 KKLMAGAAGTVKKVSLELGGNAPCIVFDDAD-LNVAVNGALAAKFRNSGQTCVCANRVLV 341
K+M AA VK VSLELGG +P +VFDD D L++A L F N+GQ C +R++V
Sbjct: 257 SKIMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIV 316
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
QE I F D K KN+K+ D E GP+++ EKV F+ +A S+GA +L G
Sbjct: 317 QENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCG 376
Query: 402 GRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 459
G R H + +PT++++V + M + +EEVFGPV + FKTEE+AI +ANDT GL
Sbjct: 377 GERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLG 436
Query: 460 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 519
A + + +++R R ++A + G++ +N + P+GG K+SG GR+ K+G++ FL I
Sbjct: 437 AAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNI 496
Query: 520 KYV 522
K V
Sbjct: 497 KQV 499
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 263/476 (55%), Gaps = 9/476 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
IGG++++A G T E NPA GEV+A V ++ + A+ SA + W+ +TA +RS+
Sbjct: 10 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 69
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ D+L +EL L TL+ GKPL E ++ GA +E+YA + GE IP
Sbjct: 70 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 129
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
++ ++P+GV I WN+P+ + K PALA G ++ KPSE TP
Sbjct: 130 R-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 188
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA-AGTVKKV 296
G+P GV NV+ G+ ++G L P + KI+FTG T+ GKK+MA A + ++K+V
Sbjct: 189 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 248
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
++ LGG +P I+F DADL+ A + A+ A F +SGQ C RV + +F +
Sbjct: 249 TMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 308
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFY 412
V+ +++GD E GPL++ +E V ++E ++ A++L GG R + G +
Sbjct: 309 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 368
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PTV ++ + +M + REE+FGPV +L + E+EAI ANDT GLAA + T +L R R
Sbjct: 369 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 428
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGD 526
LE G+ +N S P GG KQSG+GRE + + IK V LGD
Sbjct: 429 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 484
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 306 bits (785), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/476 (38%), Positives = 265/476 (55%), Gaps = 8/476 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C +R VQE IY++
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR 377
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 378 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 438 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/476 (38%), Positives = 265/476 (55%), Gaps = 8/476 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 14 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 72
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 73 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 132
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 133 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 191
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 192 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 251
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C +R VQE IY++
Sbjct: 252 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 311
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 312 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR 371
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 372 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 431
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 432 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 487
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 266/476 (55%), Gaps = 8/476 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
+ +K+V+L+LGG +P I+ DAD++ AV A A F N GQ+C +R VQE IY++
Sbjct: 258 GSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDE 317
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR 377
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 378 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 438 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 263/476 (55%), Gaps = 9/476 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
IGG++++A G T E NPA GEV+A V ++ + A+ SA + W+ +TA +RS+
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ D+L +EL L TL+ GKPL E ++ GA +E+YA + GE IP
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 130
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
++ ++P+GV I WN+P+ + K PALA G ++ KPSE TP
Sbjct: 131 R-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA-AGTVKKV 296
G+P GV NV+ G+ ++G L P + KI+FTG T+ GKK+MA A + ++K+V
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
++ELGG +P I+F DADL+ A + A+ A F +SGQ RV + +F +
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLER 309
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFY 412
V+ +++GD E GPL++ +E V ++E ++ A++L GG R + G +
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PTV ++ + +M + REE+FGPV +L + E+EAI ANDT GLAA + T +L R R
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGD 526
LE G+ +N S P GG KQSG+GRE + + IK V LGD
Sbjct: 430 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/483 (37%), Positives = 271/483 (56%), Gaps = 8/483 (1%)
Query: 48 RDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-- 105
R+ + R Q IGG+W + + + NPAT E+I ++ ++ A+ +A A
Sbjct: 17 RNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIAR 76
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+ W T A+R+K LR ++ K L L +L+ GK L E+ ++D A E+YA
Sbjct: 77 DDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAG 136
Query: 166 EAKRVYGE-IIPATL--PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
A+ + + P L + +VL++P+GV G ITPWN+PL M KV PALA GC +
Sbjct: 137 LAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAI 196
Query: 223 VKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+KPSE G+P G +N++ G P+ G L + P V KI+FTGS G
Sbjct: 197 LKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTG 256
Query: 283 KKLMAGAAGTVKKVSLELGGNAPCIVFDDAD-LNVAVNGALAAKFRNSGQTCVCANRVLV 341
K+M AA VK VSL LGG +P +VFDD D L++A L F N+GQ C +R++V
Sbjct: 257 SKIMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIV 316
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
QE I F D K KN+K+ D E GP+++ EKV F+ +A S+GA +L G
Sbjct: 317 QENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCG 376
Query: 402 GRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 459
G R H + +PT++++V + M + +EEVFGPV + FKTEE+AI +ANDT GL
Sbjct: 377 GERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLG 436
Query: 460 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 519
A + + +++R R ++A + G++ +N + P+GG K+SG GR+ K+G++ FL I
Sbjct: 437 AAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNI 496
Query: 520 KYV 522
K V
Sbjct: 497 KQV 499
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 263/476 (55%), Gaps = 9/476 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
IGG++++A G T E NPA GEV+A V ++ + A+ SA + W+ +TA +RS+
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ D+L +EL L TL+ GKPL E ++ GA +E+YA + GE IP
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 130
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
++ ++P+GV I WN+P+ + K PALA G ++ KPSE TP
Sbjct: 131 R-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA-AGTVKKV 296
G+P GV NV+ G+ ++G L P + KI+FTG T+ GKK+MA A + ++K+V
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
++ELGG +P I+F DADL+ A + A+ A F +SGQ RV + +F +
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLER 309
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFY 412
V+ +++GD E GPL++ +E V ++E ++ A++L GG R + G +
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PTV ++ + +M + REE+FGPV +L + E+EAI ANDT GLAA + T +L R R
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGD 526
LE G+ +N S P GG KQSG+GRE + + IK V LGD
Sbjct: 430 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 265/476 (55%), Gaps = 8/476 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C +R VQE IY++
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR 377
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 378 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +S+AL+ G V VN + +PFGG K SG G+E +YG+ + E+K V +
Sbjct: 438 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQELGEYGLQAYTEVKTVTV 493
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 305 bits (780), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 264/476 (55%), Gaps = 8/476 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ F GST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C +R VQE IY++
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR 377
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 378 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 438 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 267/477 (55%), Gaps = 10/477 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA-NRVLVQEGIYE 347
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C CA +R VQE IY+
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CXCAGSRTFVQEDIYD 316
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
+F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 376
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 377 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 256/479 (53%), Gaps = 13/479 (2%)
Query: 60 GGKWIDAYDGKTLE-VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
GG+ I + DG T E V PATG V+ + G +E A+ SA A+ WSK+ ERS+
Sbjct: 25 GGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSR 84
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 178
+ + ++ ++ + +L + GK + EA ++D + IE+YA A + G+ I
Sbjct: 85 VMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHI--Q 142
Query: 179 LPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
LP + ++P+GV I WN+P + K PALACG VV KPS TP
Sbjct: 143 LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297
G+P G+VNVV G A + G L P V K++FTGS GKK+M +A TVK V+
Sbjct: 203 EIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVT 261
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357
LELGG +P ++F D +L AV GAL A F GQ C RV VQ I +F + K
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRT 321
Query: 358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT------F 411
K + VGD G LI+K L+KV FV A +GA+VL GG + F
Sbjct: 322 KAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYF 381
Query: 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471
P VL N + +M +EE+FGPV +L F TEEE + AN+T GLA+ +FT ++ R
Sbjct: 382 MSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAH 441
Query: 472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDMN 528
RV+ LE G +N IS PFGG K SG GRE + +D + ++K V +GD++
Sbjct: 442 RVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVD 500
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 267/477 (55%), Gaps = 10/477 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA-NRVLVQEGIYE 347
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C CA +R VQE IY+
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRTFVQEDIYD 316
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
+F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 376
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 377 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 270/479 (56%), Gaps = 8/479 (1%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNS--WSK 110
R Q L+ GK +DA G T++ +P GEV+ + + A+++A AF++ W +
Sbjct: 22 RYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPR 81
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170
+ AERS+ K DL++A +EEL + +LE GKP+ +A GE+ + A + A +A+ +
Sbjct: 82 XSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARAL 141
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
G+ DR VL++PVGV G ITPWNFP + + +V A+ GCTVV+KPSEFT
Sbjct: 142 EGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTS 201
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
GIP GV NVV G G L P V + FTGS VG KL AA
Sbjct: 202 GTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAA 261
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
TVK+V LELGG P IVF DADL+ A +G + N+GQ C+ +R+LVQEGI +
Sbjct: 262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALX 321
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLG 408
+ + + GD E G I++A EKV ++V ++ GA++LLGG R G
Sbjct: 322 ERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAG 381
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+ +Y PTV + V + ++REE+FGPV L FKT +EA+ +AN T GL+A +++ NL+
Sbjct: 382 L-YYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLE 440
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK--YVCLG 525
+ + G +N + T P GG K+SGLGRE +YG DE+ + K +V LG
Sbjct: 441 TALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 302 bits (773), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/478 (37%), Positives = 265/478 (55%), Gaps = 6/478 (1%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF---NSW 108
+L Q I +W DA KT NP+TG+VI +V+ + A+ +A AF + W
Sbjct: 16 VLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPW 75
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEA 167
++ A+ER + L + DL+ + L L TL+ GKP + + ++D K + +YA A
Sbjct: 76 RRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWA 135
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+ +G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E
Sbjct: 136 DKYHGKTIPID-GDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 228 FTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-M 286
TP G PPGVVNV+ G P G A+ + V K+ FTGST VG + +
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 254
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A +K+V+LE+GG +P I+ DAD++ AV A A F N GQ C +R VQE IY
Sbjct: 255 AAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 314
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
+F + K+ VG+ F QGP +++ +KV +++ +G K+L GG +
Sbjct: 315 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAA 374
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
F +PTV +++ M +++EE+FGPV +L FK+ EE + AN++ GLAA +FT +
Sbjct: 375 DRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKD 434
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
L + +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 435 LDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTV 492
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 301 bits (771), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/468 (38%), Positives = 260/468 (55%), Gaps = 8/468 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C +R VQE IY++
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR 377
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 378 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEF 516
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ +
Sbjct: 438 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 268/493 (54%), Gaps = 12/493 (2%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAIS 99
++ V RL++ L I G+++ + G+T +PAT EV+ + G +E A
Sbjct: 15 IEEVRRRLKERPALH---FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAK 71
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A +AF WS+ A ER + L + +L+ H +EL + L+ G+ L+ +V A+
Sbjct: 72 AAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAEN 131
Query: 160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 219
FYAE A+ + D + ++ P G G ITPWN PL + T ++ PALA G
Sbjct: 132 FAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGN 191
Query: 220 TVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 279
TVV+KP+E++P +PPGV N+V G + G AL+ P V +T TG T
Sbjct: 192 TVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGET 251
Query: 280 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 339
GK +M AA +K++S ELGG +P +VF DADL A++ + F +G+ C ++R+
Sbjct: 252 ETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRL 311
Query: 340 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 399
LV+E I+E F + + ++VG GPLI+ L++V +VE +GA++L
Sbjct: 312 LVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLL 371
Query: 400 LGGRRHSLGM--------TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451
+GG R + PTV ++ M +++EE+FGPV + FK EEEA+ A
Sbjct: 372 VGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKA 430
Query: 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 511
NDT GLAAY+FT +L+R R++ LE G+V +N + PFGGVK SG REG Y
Sbjct: 431 NDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTY 490
Query: 512 GMDEFLEIKYVCL 524
+D + ++K + L
Sbjct: 491 ALDFYTDLKTIAL 503
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 297 bits (761), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 181/469 (38%), Positives = 262/469 (55%), Gaps = 10/469 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSK 110
Q I +W DA KT NP+TGEVI V+ G KE D A +AF + W +
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVA-EGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL-MAG 288
P G PPGVVN+V G P G A+ + V K+ FTGST +G+ + +A
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA-NRVLVQEGIYE 347
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ C CA +R VQE IY+
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRTFVQEDIYD 316
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
+F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 376
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 377 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEF 516
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ +
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 261/476 (54%), Gaps = 9/476 (1%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTA 113
Q IGG+++DA KT NP G VI VS + A+++A +AF + W K+ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYG 172
+R + L + D++ H+EEL + L+ G A+ V + ++A ++ G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 173 EIIPATL--PDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
IP P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P GIP GVVN++ G+ +G L P VRKI FTGST VGK +M
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 290 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
A VKKVSLELGG +P I+F D DLN AV +++ F N G+ C+ A R+ V+E I+ +
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + V+ +K+G+ GP ++A L K+ + + V +GA ++ GG +
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNN 466
F++PTV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 261/476 (54%), Gaps = 9/476 (1%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTA 113
Q IGG+++DA KT NP G VI VS + A+++A +AF + W K+ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYG 172
+R + L + D++ H+EEL + L+ G A+ V + ++A ++ G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 173 EIIP--ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
IP P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P GIP GVVN++ G+ +G L P VRKI FTGST VGK +M
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 290 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
A VKKVSL+LGG +P I+F D DLN AV +++ F N G+ C+ A R+ V+E I+ +
Sbjct: 278 ALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + V+ +K+G+ GP ++A L K+ + + V +GA ++ GG +
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNN 466
F++PTV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 294 bits (752), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 260/476 (54%), Gaps = 9/476 (1%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTA 113
Q IGG+++DA KT NP G VI VS + A+++A +AF + W K+ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYG 172
+R + L + D++ H+EEL + L+ G A+ V + ++A ++ G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 173 EIIPATL--PDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
IP P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P GIP GVVN++ G+ +G L P VRKI FTGST VGK +M
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 290 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
A VKKVSL LGG +P I+F D DLN AV +++ F N G+ C+ A R+ V+E I+ +
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + V+ +K+G+ GP ++A L K+ + + V +GA ++ GG +
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNN 466
F++PTV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 260/478 (54%), Gaps = 9/478 (1%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTA 113
Q IGG+++DA KT NP G VI VS + A+++A +AF + W K+ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYG 172
+R + L + D++ H+EEL + L+ G A+ V + ++A ++ G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 173 EIIP--ATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
IP P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P GIP GVVN++ G+ +G L P VRKI FTGST VGK +M
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 290 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
A VKKVSLELGG +P I+F D DLN AV +++ F N G+ + A R+ V+E I+ +
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + V+ +K+G+ GP ++A L K+ + + V +GA ++ GG +
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNN 466
F++PTV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 260/478 (54%), Gaps = 9/478 (1%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTA 113
Q IGG+++DA KT NP G VI VS + A+++A +AF + W K+ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYG 172
+R + L + D++ H+EEL + L+ G A+ V + ++A ++ G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 173 EIIPATL--PDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
IP P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P GIP GVVN++ G+ +G L P VRKI FTGST VGK +M
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 290 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
A VKKVSLELGG +P I+F D DLN AV +++ F N G+ + A R+ V+E I+ +
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQ 337
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + V+ +K+G+ GP ++A L K+ + + V +GA ++ GG +
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNN 466
F++PTV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/476 (37%), Positives = 261/476 (54%), Gaps = 23/476 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I GKWI+ D ++V NP + EVI + + +E K+AI +A L +R
Sbjct: 3 FIDGKWINRED---MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGA---KFIEFYAEEAKRVYGEI 174
L + KEEL +++ ++ GKP+K+A EV+ K FY +E + E+
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHR---DEV 116
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX-- 232
IP+ DR +F ++PVG+ GAITP+NFPL + K+ PA+A G +V PS P
Sbjct: 117 IPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 233 --XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
+P GV N++ G +GD ++ + +V I+FTGS+ VG+ L+ A
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGE-LITKKA 233
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
G KK++LELGG P IV DADLN AVN + F +GQ C+ +LV E I +KF
Sbjct: 234 G-FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFI 292
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ F K L VG+ E GPLI+ E VE VE A+ +G K+LLGG+R
Sbjct: 293 EMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK---A 349
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
+ PT+L V + ++ + E F PV P++ EEE I +AN T GL + IFTN++ ++
Sbjct: 350 LFYPTILE-VDRDNILCKTETFAPVIPIIR-TNEEEMIDIANSTEYGLHSAIFTNDINKS 407
Query: 471 WRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ +E LE+G V +N+ L + PFGGVK+SGLGREG KY M+E IK + +
Sbjct: 408 LKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 259/478 (54%), Gaps = 9/478 (1%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTA 113
Q IGG+++DA KT NP G VI VS + A+++A +AF + W K+ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYG 172
+R + L + D++ H+EEL + L+ G A+ V + ++A ++ G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 173 EIIPATL--PDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
IP P+R L K+PVGV G + PWN+PL M++ K LA G TVV+KP++ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P GIP GVVN++ G+ +G L P VRKI FTGST VGK +M
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 290 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
A VKKVSL LGG +P I+F D DLN AV +++ F N G+ + A R+ V+E I+ +
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
F + V+ +K+G+ GP ++A L K+ + + V +GA ++ GG +
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNN 466
F++PTV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 284 bits (727), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 250/475 (52%), Gaps = 14/475 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAA 114
T+ I G+W+++ +T+EV NPAT EVI V+ + A+ +A D + + +
Sbjct: 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVK 67
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYA-EEAKRVYGE 173
ER L K K+++ Q IT E G PL + V Y F A +A Y
Sbjct: 68 ERQALLDKIVKEYENRKDDIVQAITDELGAPLSLS-ERVHYQXGLNHFVAARDALDNY-- 124
Query: 174 IIPATLPDRR--LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPX 231
+RR V+K+ +GV+G ITPWNFP + K+ A A G VV+KPSE TP
Sbjct: 125 ----EFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 232 XXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
G+P GV N+V G+ +G+ L P+VR +FTGS G K+ AA
Sbjct: 181 AAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAK 240
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
KKVSLELGG +P IV DD D+ A N+GQ C RVLV I + F
Sbjct: 241 DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLA 300
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT- 410
+ ++VG+ +G GP+I+K ++V+ ++ + +GA++ GG G+
Sbjct: 301 ELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEK 360
Query: 411 --FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F PT+ NV ++ +++EE+FGPV ++ + +EAI +ANDT GLA Y+ + +
Sbjct: 361 GYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKE 420
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
+V+ ++E G V +NE ++ PFGG KQSGLGRE YG++EFLE+K +
Sbjct: 421 TLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 257/493 (52%), Gaps = 10/493 (2%)
Query: 37 SVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVH--NPATGEVIANVSCMGGKET 94
S G+ T+ L TQ LIG ++ G E H NP TG I +++ +
Sbjct: 8 SSGVDLGTENLYFQSXXDTQLLIGSRF---EAGTEAEEHILNPRTGAGIIDLAEASHAQI 64
Query: 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EV 153
A+ +A AF WS+ T AERS L K D + +E L L GKP+ E+
Sbjct: 65 DAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124
Query: 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213
F+A + ++ LP + + P+G+ G+I PWN+PL K+ P
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAP 184
Query: 214 ALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 273
A+ G TVV KPSE TP +P GVVNV+ G +G+AL+ P+V +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXV 243
Query: 274 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 333
+ TG A GKK++A AA TVK+ LELGG AP IV+ DADL VNG + N+GQ C
Sbjct: 244 SITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDC 303
Query: 334 VCANRVLVQEGIYEKFADAFSKAVKNLKVG-DGFGEGVVQGPLINKAALEKVETFVEDAV 392
A R+ + GIYEK + AV ++ D E + GPLI++ ++V +FVE A
Sbjct: 304 TAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEI-GPLISRRQRDRVASFVERAA 362
Query: 393 S-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451
K ++ GGR S F++PTV++ E + R EVFGPV + F +++A+ A
Sbjct: 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWA 422
Query: 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 511
ND++ GLA+ ++T ++ + R + L+YG +N T P GG+KQSG G++ S Y
Sbjct: 423 NDSDYGLASSVWTKDISKAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSGYGKDXSVY 482
Query: 512 GMDEFLEIKYVCL 524
++++ ++++ +
Sbjct: 483 ALEDYTAVRHIXI 495
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 257/482 (53%), Gaps = 10/482 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ I G +++ G E PATGE+IA + + AI+SA A W+ ++
Sbjct: 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSP 73
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKR-VY 171
R + L++ D++ + L L TL+ GKP++E V + GA EF+ A +
Sbjct: 74 MARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALN 133
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPX 231
G+ IP L + + P+GV I WN+P + K PAL G +V KPSE TP
Sbjct: 134 GDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191
Query: 232 XXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
G+P G+ NV+ G+ D G L+ P V K++ TGS G+K+ A AAG
Sbjct: 192 GALKIAEILIEAGLPKGLFNVIQGDR-DTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG 250
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
+K V++ELGG +P IVFDDAD+ AV GA+ F +SGQ C RV VQ+ +F +
Sbjct: 251 HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLE 310
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG--RRHSLGM 409
+ + + +GD GPL++KA EKV +++E ++GA ++ GG + G
Sbjct: 311 NLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGE 370
Query: 410 TFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
Y +PTV ++V +M ++REE+FGPV +L F E+E + AN T GLA +FT +L
Sbjct: 371 GAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK--YVCLGD 526
R RV + LE G + +N + PFGG KQSG GRE S ++ + E+K YV G
Sbjct: 431 RAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGK 490
Query: 527 MN 528
++
Sbjct: 491 VD 492
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 258/481 (53%), Gaps = 4/481 (0%)
Query: 44 TDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD 103
T + +GL++ + LI G+ + +G+ V+NPATG+V+ ++ ++ A+ +A
Sbjct: 13 TSLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADA 71
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEF 162
AF W + T R++ L K D++ + + +L + GKPL A E+ F
Sbjct: 72 AFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRF 131
Query: 163 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
+A A+ + G L + + P+GV +I PWN+PL M K+ PALA G VV
Sbjct: 132 FAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVV 191
Query: 223 VKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+KPSE TP P GVVN++ G +GD L P+VR ++ TGS A G
Sbjct: 192 LKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250
Query: 283 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 342
+ +++ A ++K+ +ELGG AP IVFDDAD+ V G + N+GQ C A R+ Q
Sbjct: 251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQ 310
Query: 343 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLLG 401
+GIY+ + AV LK G E GPL + A LE+V VE+A + G KV+ G
Sbjct: 311 KGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITG 370
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G + +Y PT+L+ + + ++EVFGPV + F EE+ ++ AND+ GLA+
Sbjct: 371 GEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASS 430
Query: 462 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 521
++T ++ R RVS L+YG VN + P GG K SG G++ S YG++++ +++
Sbjct: 431 VWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490
Query: 522 V 522
V
Sbjct: 491 V 491
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 271 bits (692), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 252/478 (52%), Gaps = 9/478 (1%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S L + + I G W D L V +P+T E A +S ++ AI++A AF +W
Sbjct: 21 SMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWK 80
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAK 168
+ ER + K ++ ++ + I++E G P+ A+ + G+ I + + K
Sbjct: 81 TTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYK 140
Query: 169 RVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
A + +L +GV G ITPWN+P+ +T KV PAL GCT+V+KPSE
Sbjct: 141 EF--SFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSE 198
Query: 228 FTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
P +P GV N++ G+ ++G L P + I+FTGST GK +
Sbjct: 199 IAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISK 258
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
A+ T+K+V LELGG I+F DAD++ A+ + F NSGQ+C R+LV++ IY+
Sbjct: 259 NASNTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYD 317
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
K + +VG G G GP+++K +K++ ++ + +GA ++ GG +
Sbjct: 318 KAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM 377
Query: 408 GMT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
GM + PTV ++VK M + REE+FGPV LL F TE+EA+ +ANDT GL YI +
Sbjct: 378 GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQS 437
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + R++ + G+V VN G + FGGVK SG REG +G+ EFL+ K +
Sbjct: 438 QDRSKCRRIAAQVRSGMVEVN-GHELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 266/483 (55%), Gaps = 16/483 (3%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 115
+ I GKW G+T ++ NP VI S GK+ +DA A A W+K T +
Sbjct: 8 KSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTED 67
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI- 174
R L+K L +++++ +I E G + ++ E++ ++ EA GE+
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILD----EAMTYTGELG 123
Query: 175 ----IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
+P+ + + + + P+GV +I+P+NFP+ + R + PA+A G +VV KP T
Sbjct: 124 GVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTA 183
Query: 231 XXX-XXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
G+P GV+NV++ + +IGD +LT+P R I+FTGSTAVG+ + A
Sbjct: 184 ISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIA 243
Query: 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 349
K+++LELGGN P V DAD++ AV+ A+ KF + GQ C+ NR++V + +Y++F
Sbjct: 244 GRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEF 303
Query: 350 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409
+ F+ VK L GD V GPLIN+ +EK +E A + G ++ + G+R +
Sbjct: 304 VEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVL 363
Query: 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469
T P V + +++ E+F P+A ++ +++EAI MANDT GL++ +FT++L++
Sbjct: 364 T---PYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEK 420
Query: 470 TWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 527
+ + ++ G+ VN+ + S +A FGG K SG+GR G+ + ++EF K++ +
Sbjct: 421 GEKFALQIDSGMTHVNDQSVNDSPNIA-FGGNKASGVGRFGNPWVVEEFTVTKWISIQKQ 479
Query: 528 NRK 530
RK
Sbjct: 480 YRK 482
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 257/479 (53%), Gaps = 7/479 (1%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+G+ T+ LIGG+W++ + NP VIA + A +A A W+
Sbjct: 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWA 67
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
AAERS + + +LL H+EE+ + + E G +A E+ + A R
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGR 127
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
V+G I P+ P + V + GV G I+PWNFPL + R V PALA G VV+KP+ T
Sbjct: 128 VHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDT 187
Query: 230 PXX-XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL--M 286
P G+P GV++ V G +IGD +T + I+FTGST VG+++ +
Sbjct: 188 PVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGEL 247
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A G +K V+LELGGNAP +V DAD++ A A F + GQ C+ NRV+V ++
Sbjct: 248 AINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVH 307
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
++F + F +AVKN+ GD EG + GP+IN + L ++ +E A +GA V + G
Sbjct: 308 DEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEG---P 364
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
+ P V S+V S+M ++REE+FGP+ +L E A +AN ++ GL+A +++ +
Sbjct: 365 IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKD 424
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ R + + ++ G+V +N+ ++ E FGG K SGLGR + ++EF +++ +
Sbjct: 425 IDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGI 483
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 232/447 (51%), Gaps = 2/447 (0%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135
NPATG+ +A +E + A+S A F W + A+R++ LR L AH EE
Sbjct: 13 NPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEXA 72
Query: 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAG 195
Q IT E GKP+K+A EV A ++YAE P + +++ + +P+GV
Sbjct: 73 QCITREXGKPIKQARAEVTKSAALCDWYAEHGPAXLNPE-PTLVENQQAVIEYRPLGVIL 131
Query: 196 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMG 255
AI PWNFPL + R P L G + ++K + G P GV V
Sbjct: 132 AIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWVNA 191
Query: 256 NAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLN 315
N + + P++ +T TGS G + A A +KK LELGG+ P IV +DADL
Sbjct: 192 NNEGVSQXI-NDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250
Query: 316 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 375
+AV A+A +++N+GQ C A R +V+EGI + F D F A LK GD E GP
Sbjct: 251 LAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPX 310
Query: 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPV 435
+++ V+ +V++GA++LLGG + + +Y TVL++V + R+E+FGPV
Sbjct: 311 ARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPV 370
Query: 436 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP 495
A + K A+ +AND+ GL+A IFT + + LE G V +N S
Sbjct: 371 AAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSASDARVA 430
Query: 496 FGGVKQSGLGREGSKYGMDEFLEIKYV 522
FGGVK+SG GRE S +G+ EF ++ V
Sbjct: 431 FGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 245/456 (53%), Gaps = 3/456 (0%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL 111
+ + + I G+W+++ + +V NPAT EV+ V ++ A +A +AF +WSK+
Sbjct: 3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKV 62
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171
R++ L + LL HKEEL LIT+E GK KEA+GEV G + +EF A +
Sbjct: 63 AVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMM 122
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPX 231
G+ + + D + P+GV G I P+NFP+ + A+A G T ++KPSE TP
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 232 XXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
G+P GV NVV G A D+ + +L P+++ I+F GS VG+ + +
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
+K+V G IV +DA+L V + A F ++G+ C+ V V+EGI ++F
Sbjct: 242 NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMA 301
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-SLGMT 410
+ V ++K+G+G +GV GP+I + ++ +++E + +GA+++ GR + S
Sbjct: 302 KLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGY 361
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
F PT+ NV +EM + ++E+F PV ++ K +EAI +AN + A +FT+N
Sbjct: 362 FVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAI 421
Query: 471 WRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG 505
E ++ G++G+N G+ + PF G K S G
Sbjct: 422 RYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFG 457
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 255/492 (51%), Gaps = 26/492 (5%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
+ DS + IGGKW +EV PATGE + V + A+++A AF+
Sbjct: 1 MSDSATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFD 60
Query: 107 S--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP--------LKEAVGEVDY- 155
+ W ER+ + +L K+ +L+ E G+P ++G ++Y
Sbjct: 61 NGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYF 120
Query: 156 -GAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214
GA + E YG+ I V ++PVGV GAI WN PL + K+ PA
Sbjct: 121 AGAADKVTWTETRTGSYGQSI----------VSREPVGVVGAIVAWNVPLFLAVNKIAPA 170
Query: 215 LACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 274
L GCT+V+KP+ TP G+P GV++VV G + G AL ++P + T
Sbjct: 171 LLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGI-ETGQALTSNPDIDMFT 229
Query: 275 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 334
FTGS+AVG+++ AA +K +LELGG + I+ +D DL A+ + + N+GQ CV
Sbjct: 230 FTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCV 289
Query: 335 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 394
R+L Y++ A + V L VG GPLI++ +VE ++ + +
Sbjct: 290 NQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEE 349
Query: 395 GAKVLL-GGRRHSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452
GA+++ GGR L F+ +PTV ++V ++M +++EE+FGPV ++ + TEE+AI +AN
Sbjct: 350 GARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIAN 409
Query: 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYG 512
D+ GLA ++T ++ + ++S+ + G G+N +PFGG K SG+GRE G
Sbjct: 410 DSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFDPG-SPFGGYKNSGIGRENGPEG 468
Query: 513 MDEFLEIKYVCL 524
++ F + K V L
Sbjct: 469 VEHFTQQKSVLL 480
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 236/462 (51%), Gaps = 18/462 (3%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
L G+W+++ G+ + + PA+G + ++ + +E DAI A DA W ER
Sbjct: 15 LRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERV 74
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
L W DLL KE +G+LI E KP K A+GEV A I A+EA R+ GE +
Sbjct: 75 DLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKG 134
Query: 178 TL-----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX 232
+ V ++P+GV AI+P+N+P+ + K+ PAL G TVV KP+
Sbjct: 135 DQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194
Query: 233 XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
G P G++ VV G IGD L+ P + ITFTG T G+++ A
Sbjct: 195 GIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--K 252
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 352
+ V LELGG P IV DDADL + + ++ F SGQ C RV VQ+ + ++
Sbjct: 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 412
+ V+ L VG + + P+I++ + ++ ++DA+ GA +L G +R
Sbjct: 313 IKELVEQLTVGSPEDDADIT-PVIDEKSAAFIQGLIDDALENGATLLSGNKRQG---NLL 368
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PT+L +V M V+ EE FGPV P++ K EAI ++N ++ GL A IFT + R
Sbjct: 369 SPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN 428
Query: 473 VSEALEYGLVGVNEGLISTEVA----PFGGVKQSGLGREGSK 510
+ + LE G V +N TE PF GVK+SGLG +G K
Sbjct: 429 IGKHLEVGTVHINA---KTERGPDHFPFLGVKKSGLGVQGIK 467
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 240/475 (50%), Gaps = 14/475 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 115
+ + G+W ++++ PA+G + +V M +E +SA A +W L+ E
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 175
R+ L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE++
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 176 -----PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
G+P GV N + G +IGD ++ V I FTGST +G+++ G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI--GKM 241
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
++ + LELGG IV +DADL + +A F SGQ C RVLV E + ++
Sbjct: 242 AGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ + V L +G+ + + PLI+ + + VE + DA KGA L +R
Sbjct: 302 EKIREKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIKREG---N 357
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 471 WRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 240/475 (50%), Gaps = 14/475 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 115
+ + G+W ++++ PA+G + +V M +E +SA A +W L+ E
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 175
R+ L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE++
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 176 -----PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
G+P GV N + G +IGD ++ V I F+GST +G+++ G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERI--GKM 241
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
++ + LELGG IV +DADL + +A F SGQ C RVLV E + ++
Sbjct: 242 AGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ + V L +G+ + + PLI+ + + VE + DA KGA L +R
Sbjct: 302 EKIREKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIKREG---N 357
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 471 WRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 239/475 (50%), Gaps = 14/475 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 115
+ + G+W ++++ PA+G + +V M +E +SA A +W L+ E
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 175
R+ L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE++
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 176 -----PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
G+P GV N + G +IGD ++ V I FTGST +G+++ G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI--GKM 241
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
++ + L LGG IV +DADL + +A F SGQ C RVLV E + ++
Sbjct: 242 AGMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ + V L +G+ + + PLI+ + + VE + DA KGA L +R
Sbjct: 302 EKIREKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIKREG---N 357
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 471 WRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 239/475 (50%), Gaps = 14/475 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 115
+ + G+W ++++ PA+G + +V M +E +SA A +W L+ E
Sbjct: 6 KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 175
R+ L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE++
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 176 -----PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
G+P GV N + G +IGD ++ V I FTGST +G+++ G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI--GKM 241
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
++ + LELGG IV +DADL + +A F SGQ RVLV E + ++
Sbjct: 242 AGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELV 301
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ + V L +G+ + + PLI+ + + VE + DA KGA L +R
Sbjct: 302 EKIREKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIKREG---N 357
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 471 WRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 212/449 (47%), Gaps = 16/449 (3%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135
NP T E A+ K+ +AI+ A + W A R++ L + L H++EL
Sbjct: 10 NPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELA 69
Query: 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL-------FVLK 188
+ TLE GK L E+ EV+ +YA+ P L +L + LK
Sbjct: 70 KXXTLEXGKLLSESKEEVELCVSICNYYADHG--------PEXLKPTKLNSDLGNAYYLK 121
Query: 189 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPG 248
Q GV A PWNFPL + R P G +++K + P G P G
Sbjct: 122 QSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 249 VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 308
+ + + + D ++ P+++ + TGS G + A +KK + ELGGN IV
Sbjct: 182 SLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIV 240
Query: 309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 368
DDAD V N A+ N GQ C + R++V++ Y++ NLK GD
Sbjct: 241 LDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEA 300
Query: 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 428
P ++ A EK+E V++A+ GAKV F+ PT+L+++ + V
Sbjct: 301 DTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFD 360
Query: 429 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 488
+EVFGP+A + + + AI +AND++ GL + + +++ R +VS +E G +N
Sbjct: 361 KEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRW 420
Query: 489 ISTEVAPFGGVKQSGLGREGSKYGMDEFL 517
I++ PFGG+K+SG GRE S G+ F+
Sbjct: 421 ITSGELPFGGIKKSGYGRELSGLGLXAFV 449
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 234/479 (48%), Gaps = 11/479 (2%)
Query: 47 LRDSGLLRTQ-GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
L++ GL G+ G W G+ + + PA E IA V+ E ++ + +A+
Sbjct: 13 LKELGLSEDNPGVYNGSW--GGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAW 70
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W+ + A +R + +R+ D L + LG L++LE GK E VGEV ++
Sbjct: 71 KMWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDYAVG 130
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ + G ++P+ P L PVG+ G IT +NFP+A+ AL CG + K
Sbjct: 131 LSRMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKG 190
Query: 226 SEFTPXXXXXXXXXXX----XXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
+ TP +P + ++ G A DIG A+ +V ++FTGST V
Sbjct: 191 APTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGA-DIGTAMAKDERVDLLSFTGSTHV 249
Query: 282 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 341
GK + + LELGGN IVF+DADLN+ V A+ A +GQ C R+++
Sbjct: 250 GKMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLML 309
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
E +++ + +KA K +++GD + + GPL K A+++ +E A +G ++ G
Sbjct: 310 HESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCG 369
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G+ + EPT+++ + + + E F P+ +L FKTEEEA N+ GL++
Sbjct: 370 GKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSS 429
Query: 462 IFTNNLQRT--WRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFL 517
IFT +L R W + + G+V VN E+ FGG K +G GRE +++
Sbjct: 430 IFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYM 488
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 229/473 (48%), Gaps = 19/473 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+I G+ + D ++ NPA +++ +VS + AI SA +AF +W + ER
Sbjct: 41 IINGERVTTED--KIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEER 98
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--GEI 174
+ L K ++ K E + E GKP KEA + F+E+YA + + EI
Sbjct: 99 ANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEI 158
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXX 234
+ R F P+GV I+PWNF LA++ + G TVV+KP+ TP
Sbjct: 159 LSRPGEQNRYFY--TPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAA 216
Query: 235 XXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA---- 290
G+P GV+N V G+ ++GD L+ P+ ITFTGS VG +L AA
Sbjct: 217 KFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRP 276
Query: 291 --GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
+K+V +E+GG +V DADL++A L + F SGQ C +R ++ + +Y++
Sbjct: 277 GQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDE 336
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
+ KNL VGD GP+I++ A EK+ +++E +G +++ GG S
Sbjct: 337 VLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSST 395
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F +PT+++++ E ++ +EE+FGPV + A+ +AN+T GL + T N
Sbjct: 396 GFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEI 519
+ G + N V PFGG K SG SK G ++L +
Sbjct: 456 HIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGT---DSKAGGPDYLAL 505
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 239/477 (50%), Gaps = 20/477 (4%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS--KLTAAER 116
+ G+W G+ +EV +P IA V +E + + F WS + ER
Sbjct: 23 LAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKR-GRWSARDMPGTER 79
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
LRK D++ + + +++ + GKP AVGEV + + K++ G+ IP
Sbjct: 80 LAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIP 139
Query: 177 ATLPDRRL----FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX 232
L V ++P+GV AITP+N+PL K+ + G VVVKPS P
Sbjct: 140 GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 199
Query: 233 XXXXXXXXXXXGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
G PP + ++ N P + ++ +V ++FTGST VG++++ G
Sbjct: 200 AAMAVKALLDAGFPPDAIALL--NLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK--VG 255
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
VK+ +ELGG P IV +DADL++A + + +GQ C VL + +Y K +
Sbjct: 256 GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE 315
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411
+K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL GGRR LG T+
Sbjct: 316 EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTY 373
Query: 412 YEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+PT++ ++ +M++ + EVF PVA + K ++AI +AN GL A +F ++
Sbjct: 374 VQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433
Query: 469 RTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ R LE G + +N+ PFGG K+SG+ REG Y ++ K +
Sbjct: 434 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 239/477 (50%), Gaps = 20/477 (4%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS--KLTAAER 116
+ G+W G+ +EV +P IA V +E + + F WS + ER
Sbjct: 23 LAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKR-GRWSARDMPGTER 79
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
LRK D++ + + +++ + GKP AVGEV + + K++ G+ IP
Sbjct: 80 LAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIP 139
Query: 177 ATLPDRRL----FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX 232
L V ++P+GV AITP+N+PL K+ + G VVVKPS P
Sbjct: 140 GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 199
Query: 233 XXXXXXXXXXXGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
G PP + ++ N P + ++ +V ++FTGST VG++++ G
Sbjct: 200 AAMAVKALLDAGFPPDAIALL--NLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK--VG 255
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
VK+ +ELGG P IV +DADL++A + + +GQ C VL + +Y K +
Sbjct: 256 GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE 315
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411
+K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL GGRR LG T+
Sbjct: 316 EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTY 373
Query: 412 YEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+PT++ ++ +M++ + EVF PVA + K ++AI +AN GL A +F ++
Sbjct: 374 VQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433
Query: 469 RTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ R LE G + +N+ PFGG K+SG+ REG Y ++ K +
Sbjct: 434 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 238/477 (49%), Gaps = 20/477 (4%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS--KLTAAER 116
+ G+W G+ +EV +P IA V +E + + F WS + ER
Sbjct: 23 LAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKR-GRWSARDMPGTER 79
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
LRK D++ + + +++ + GKP AVGEV + + K++ G+ IP
Sbjct: 80 LAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIP 139
Query: 177 ATLPDRRL----FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX 232
L V ++P+GV AITP+N+PL K+ + G VVVKPS P
Sbjct: 140 GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 199
Query: 233 XXXXXXXXXXXGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
G PP + ++ N P + ++ +V ++FTGST VG++++ G
Sbjct: 200 AAMAVKALLDAGFPPDAIALL--NLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK--VG 255
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
VK+ +ELGG P IV +DADL++A + + +GQ C VL + +Y K +
Sbjct: 256 GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE 315
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411
+K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL GGRR LG T+
Sbjct: 316 EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTY 373
Query: 412 YEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+PT + ++ +M++ + EVF PVA + K ++AI +AN GL A +F ++
Sbjct: 374 VQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433
Query: 469 RTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ R LE G + +N+ PFGG K+SG+ REG Y ++ K +
Sbjct: 434 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 231/479 (48%), Gaps = 11/479 (2%)
Query: 47 LRDSGLLR-TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
L++ GL +G+ G W G+ + + PA E IA V + ++ + A +A+
Sbjct: 15 LKELGLREENEGVYNGSW--GGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAW 72
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W+ + A +R + +R+ D L + LG L++LE GK L E VGEV ++
Sbjct: 73 KIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVG 132
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ + G I+P+ L PVG+ G IT +NFP+A+ A+ CG + K
Sbjct: 133 LSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKG 192
Query: 226 SEFTPXXXXXXXXXXXX----XGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
+ T +P + ++ G A DIG A+ +V ++FTGST V
Sbjct: 193 APTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGA-DIGTAMAKDERVNLLSFTGSTQV 251
Query: 282 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 341
GK++ + LELGGN I F+DADL++ V AL A +GQ C A R+ +
Sbjct: 252 GKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFI 311
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
E I+++ + KA ++VG+ + V+ GPL K A+ VE+A +G V+ G
Sbjct: 312 HESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYG 371
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G+ + EPT+++ + + ++ E F P+ + F+ EEE N+ GL++
Sbjct: 372 GKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSS 431
Query: 462 IFTNNLQRT--WRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFL 517
IFT +L R W + + G+V VN E+ FGG K +G GRE +++
Sbjct: 432 IFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYM 490
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 240/497 (48%), Gaps = 19/497 (3%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAIS 99
M+ R+R+ IGG+W+D + + + ++ A EV+ + G E + A+
Sbjct: 23 MREALRRVREEFGRHYPLYIGGEWVDTKE-RMVSLNPSAPSEVVGTTAKAGKAEAEAALE 81
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A+ AF +W +RS+ L K L+ K EL + E GK EA +V F
Sbjct: 82 AAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDF 141
Query: 160 IEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216
IE+YA A R E++P D F + P+G I PWNFP+A+ T + +A
Sbjct: 142 IEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPVA 199
Query: 217 CGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276
G TV+ KP+E G PPGVVN + G ++G L+ P++R I FT
Sbjct: 200 VGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFT 259
Query: 277 GSTAVGKKLMAGAAGTV-------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329
GS VG K+ AAG + K+ +E GG IV + AD ++A G + + +
Sbjct: 260 GSLEVGLKIYE-AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQ 318
Query: 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389
GQ C A+R+++ +G YE + K + L VG E GP+++ KV +++E
Sbjct: 319 GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIE 377
Query: 390 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449
++G +++LGG+R F PTV + V + +++EE+FGPV ++ K EA+
Sbjct: 378 IGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE 436
Query: 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGL-GR 506
+ANDT GL +++ + G + N + V PFGG K SG +
Sbjct: 437 VANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496
Query: 507 EGSKYGMDEFLEIKYVC 523
G+ + FLE+K V
Sbjct: 497 TGALDYLRLFLEMKAVA 513
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 240/497 (48%), Gaps = 19/497 (3%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAIS 99
M+ R+R+ IGG+W+D + + + ++ A EV+ + G E + A+
Sbjct: 23 MREALRRVREEFGRHYPLYIGGEWVDTKE-RMVSLNPSAPSEVVGTTAKAGKAEAEAALE 81
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A+ AF +W +RS+ L K L+ K EL + E GK EA +V F
Sbjct: 82 AAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDF 141
Query: 160 IEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216
IE+YA A R E++P D F + P+G I PWNFP+A+ T + +A
Sbjct: 142 IEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPVA 199
Query: 217 CGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276
G TV+ KP+E G PPGVVN + G ++G L+ P++R I FT
Sbjct: 200 VGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFT 259
Query: 277 GSTAVGKKLMAGAAGTV-------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329
GS VG K+ AAG + K+ +E GG IV + AD ++A G + + +
Sbjct: 260 GSLEVGLKIYE-AAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQ 318
Query: 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389
GQ C A+R+++ +G YE + K + L VG E GP+++ KV +++E
Sbjct: 319 GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIE 377
Query: 390 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449
++G +++LGG+R F PTV + V + +++EE+FGPV ++ K EA+
Sbjct: 378 IGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE 436
Query: 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGL-GR 506
+ANDT GL +++ + G + N + V PFGG K SG +
Sbjct: 437 VANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496
Query: 507 EGSKYGMDEFLEIKYVC 523
G+ + FLE+K V
Sbjct: 497 TGALDYLRLFLEMKAVA 513
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 213/452 (47%), Gaps = 15/452 (3%)
Query: 76 NPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
NPA E V+ VS + AI +A AF +W ER+ L + + K E
Sbjct: 57 NPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPEERAAVLFRAVAKVRRKKHEF 116
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA-KRVYGEIIPATLPDRRLFVLKQPVGV 193
L+ E GKP EA + F+E+YA + + G+ + + +R +V P GV
Sbjct: 117 SALLVKEAGKPWNEADADTAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVY-TPTGV 175
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV 253
I PWNF A++ + G TVV+KP+ P G+P GVVN V
Sbjct: 176 TVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFV 235
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT------VKKVSLELGGNAPCI 307
G+ ++GD L+ P+ ITFTGS VG ++ AA +K+V E+GG +
Sbjct: 236 PGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVV 295
Query: 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367
V +D D+ +A + F +GQ C +R +V E +Y++ + ++ KVG+
Sbjct: 296 VDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDS 355
Query: 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 427
V GP+I++A+ K+ ++E +G +++ GG+ F EPT+ +++ + +
Sbjct: 356 ADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGYFIEPTIFADLDPKARLM 414
Query: 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 487
+EE+FGPV + +EA+ +AN+T GL + T N R + G + N
Sbjct: 415 QEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRN 474
Query: 488 LISTEVA--PFGGVKQSGLGREGSKYGMDEFL 517
V PFGG K SG SK G ++L
Sbjct: 475 CTGAIVGYHPFGGFKMSGT---DSKAGGPDYL 503
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 239/497 (48%), Gaps = 19/497 (3%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAIS 99
M+ R+R+ IGG+W+D + + + ++ A EV+ + G E + A+
Sbjct: 23 MREALRRVREEFGRHYPLYIGGEWVDTKE-RMVSLNPSAPSEVVGTTAKAGKAEAEAALE 81
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A+ AF +W +RS+ L K L+ K EL + E GK EA +V F
Sbjct: 82 AAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDF 141
Query: 160 IEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216
IE+YA A R E++P D F + P+G I PWNFP+A+ T + +A
Sbjct: 142 IEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPVA 199
Query: 217 CGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276
G TV+ KP+E G PPGVVN + G ++G L+ P++R I FT
Sbjct: 200 VGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFT 259
Query: 277 GSTAVGKKLMAGAAGTV-------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329
GS VG K+ AAG + K+ +E GG IV + AD ++A G + + +
Sbjct: 260 GSLEVGLKIYE-AAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQ 318
Query: 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389
GQ A+R+++ +G YE + K + L VG E GP+++ KV +++E
Sbjct: 319 GQKXSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIE 377
Query: 390 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449
++G +++LGG+R F PTV + V + +++EE+FGPV ++ K EA+
Sbjct: 378 IGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE 436
Query: 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGL-GR 506
+ANDT GL +++ + G + N + V PFGG K SG +
Sbjct: 437 VANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496
Query: 507 EGSKYGMDEFLEIKYVC 523
G+ + FLE+K V
Sbjct: 497 TGALDYLRLFLEMKAVA 513
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 216/463 (46%), Gaps = 8/463 (1%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I GK + G+ + NPATGEV V+ + A+ SA A W+ R+
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
+ K+ LL + EL + ++ E GK + +A G++ G + EF E
Sbjct: 90 RVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXX 237
P + ++QPVG+ ITP+NFP + PA+ACG ++KPSE P
Sbjct: 150 AGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLA 209
Query: 238 XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297
G+P G++NVV G+ + DA+LT P + ++F GST + + + AA K+
Sbjct: 210 ELXIEAGLPAGILNVVNGDKGAV-DAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQ 268
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN-RVLVQEGIYEKFADAFSKA 356
G I+ DADL+ A N + A + ++G+ C + V V E + D
Sbjct: 269 CFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPX 328
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL----GMTFY 412
V++L++G E GP++ K A +++ + ++ + +GAK+++ GR L F
Sbjct: 329 VESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFI 388
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
+ +V + + + E+FGPV ++ + EEA+ + G I+T +
Sbjct: 389 GGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARD 448
Query: 473 VSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREGSKYGMD 514
+ + G VGVN + + FGG K S G + +++G D
Sbjct: 449 FASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFG-DLNQHGTD 490
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 199/426 (46%), Gaps = 12/426 (2%)
Query: 70 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA 129
KT+EV NP TG+ + + + A A + W +L R L++W +++
Sbjct: 6 KTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILS 65
Query: 130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLK 188
+E+L + + + G+ L V E+D I+ + A + T +P L+
Sbjct: 66 RREQLTEALVNDTGR-LSITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIP---FIALQ 121
Query: 189 Q---PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGI 245
Q P + G I+PWNFPL + PAL GC VVVKPSE P
Sbjct: 122 QSLVPYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPLLXALNTVPE 181
Query: 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 305
V+ V G + G L+ V + FTGS A G+++ AA LELGG P
Sbjct: 182 LRDVLIFVEGGG-ETGANLIN--YVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDP 238
Query: 306 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365
IV + A+L +A + L N+GQ+C+ R+ V E +E+F L++
Sbjct: 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298
Query: 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY-EPTVLSNVKSEM 424
E GP+I + + + DAV KGA + GG+ LG ++ PTV +NV
Sbjct: 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSX 358
Query: 425 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 484
V EE FGP+ P+ F EEA+++ANDT GL+A +F + +V+ L G + +
Sbjct: 359 KVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISI 418
Query: 485 NEGLIS 490
N+ ++
Sbjct: 419 NDAALT 424
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 217/453 (47%), Gaps = 10/453 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G+W+ A G+TLE +P V+ + + A+ +A +AF +W++ +R +
Sbjct: 10 IAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIE 68
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 178
L ++ L + +EL ++I E GKPL E+ EV + + + GE
Sbjct: 69 LLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGEK-SGP 127
Query: 179 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXX 238
L D + +P GV P+NFP + + PAL G VV KPSE TP
Sbjct: 128 LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLK 187
Query: 239 XXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV-S 297
G+P GV+N+V G + G AL + + FTGS+ G L + G +K+ +
Sbjct: 188 AWIQAGLPAGVLNLVQGGR-ETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILA 246
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357
LE GGN P +V + ADL+ AV + + F ++GQ C CA R+LV +G + A AV
Sbjct: 247 LEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAV 306
Query: 358 K-NLKVGDGFGE--GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 414
L+VG F E G +I+ +A E + E + KGA+ LL + G P
Sbjct: 307 SATLRVGR-FDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAALLTP 365
Query: 415 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 474
+L +V + EE FGP+ ++ + AI AN T GLAA + +++ +R +
Sbjct: 366 GIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL 424
Query: 475 EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGR 506
G+V N+ L + APFGG+ SG R
Sbjct: 425 VESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 201/444 (45%), Gaps = 50/444 (11%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY 155
D + A +AFNS RS R + E L ++I E K + A+ D
Sbjct: 5 DTVKRAREAFNS-----GKTRSLQFR------IQQLEALQRMIN-ENLKSISGALAS-DL 51
Query: 156 GAKFIEFYAEEAKRVYGEIIPAT--LPD---------------RRLFVLKQPVGVAGAIT 198
G Y EE V E+ LPD L++ +P+GV I
Sbjct: 52 GKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIG 111
Query: 199 PWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP 258
WN+P + + + A+A G V++KPSE + + + VV G P
Sbjct: 112 AWNYPFNLTIQPMVGAVAAGNAVILKPSEVS-GHMADLLATLIPQYMDQNLYLVVKGGVP 170
Query: 259 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV 318
+ + L + I +TGSTAVGK +MA AA + V+LELGG +PC V D DL+VA
Sbjct: 171 ETTE--LLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVAC 228
Query: 319 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ----GP 374
KF NSGQTCV + +L I + + K++K D +GE Q G
Sbjct: 229 RRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-----DFYGEDAKQSRDYGR 283
Query: 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGP 434
+IN ++V+ +++ KV GG + PT+L +V + V +EE+FGP
Sbjct: 284 IINDRHFQRVKGLIDN-----QKVAHGGTWDQ-SSRYIAPTILVDVDPQSPVMQEEIFGP 337
Query: 435 VAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA 494
V P++C ++ EEAI N LA Y+F+NN + ++ G V N+ ++ V
Sbjct: 338 VMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVP 397
Query: 495 --PFGGVKQSGLGREGSKYGMDEF 516
PFGGV SG+G K + F
Sbjct: 398 TLPFGGVGNSGMGAYHGKKSFETF 421
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 197/428 (46%), Gaps = 18/428 (4%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL-GQLITLEQGKPLKEAVGEVD 154
+A+ A AF+S R + L L+ ++EL G L EV
Sbjct: 22 EAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVV 81
Query: 155 YGAKFIEFY----AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
Y + IE+ E A E P T D L++ +P+GV I WN+P + +
Sbjct: 82 YVLEEIEYMIQKLPEWAADEPVEKTPQTQQDE-LYIHSEPLGVVLVIGTWNYPFNLTIQP 140
Query: 211 VGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQV 270
+ A+A G VV+KPSE + + + V+ G P+ + L +
Sbjct: 141 MVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTE--LLKERF 197
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 330
I +TGST VGK +M AA + V+LELGG +PC V + DL+VA KF NSG
Sbjct: 198 DHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSG 257
Query: 331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390
QTCV + +L I + + K++K G+ + G +I+ ++V +E
Sbjct: 258 QTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLIE- 315
Query: 391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450
G KV GG + + PT+L++V + V +EE+FGPV P++C ++ EEAI
Sbjct: 316 ----GQKVAYGGTGDA-ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQF 370
Query: 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREG 508
N LA Y+F++N + ++ G V N+ + I+ PFGGV SG+G
Sbjct: 371 INQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYH 430
Query: 509 SKYGMDEF 516
K + F
Sbjct: 431 GKKSFETF 438
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 204/459 (44%), Gaps = 12/459 (2%)
Query: 81 EVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL 140
EV+ + G E DAI++A AF +W R++ L K EL L
Sbjct: 557 EVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVL 616
Query: 141 EQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW 200
E GK +A +V F+E+YA E R+ P +P GVA I PW
Sbjct: 617 EIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPW 676
Query: 201 NFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 260
NFPLA+ A+ G VV KPS T G+P GV N G +
Sbjct: 677 NFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVM 736
Query: 261 GDALLTSPQVRKITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADL 314
GD L+ P + I FTGS G +++ AA VKK+ E+GG I+ DDADL
Sbjct: 737 GDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADL 796
Query: 315 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374
+ AV L + F GQ C +RV+V + +Y+KF + K KVG G
Sbjct: 797 DEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGA 856
Query: 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP-TVLSNVKSEMLVSREEVFG 433
+ + A++ ++ + E + K +L G ++ P T++ +K E +++EE+FG
Sbjct: 857 VADDKAMKSIKEYAE--IGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFG 914
Query: 434 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--T 491
PV ++ K ++AI AN T L IF+ + + + G + +N
Sbjct: 915 PVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALV 974
Query: 492 EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGDMNR 529
E PFGG + SG+G + G + F++ + V M R
Sbjct: 975 ERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENTMRR 1013
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 189/423 (44%), Gaps = 27/423 (6%)
Query: 108 WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 167
WS+ A R+ L + LL + L+ E GK L +A+ E+ A F +YA +
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQG 625
Query: 168 KRVYGE--IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++++G +P + ++ GV AI+PWNFPLA+ +V AL G +VV KP
Sbjct: 626 RKLFGSETAMPGPTGESNALTMRG-RGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKP 684
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+E TP GIP + +V G+ IG AL P + + FTGST V + +
Sbjct: 685 AEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIAGVVFTGSTEVARSI 743
Query: 286 ---MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 342
+A G + + E GG I A + + + FR++GQ C + VQ
Sbjct: 744 NRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQ 803
Query: 343 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 402
E + ++ + + A + LK+GD GP+I+ A ++++ + A++
Sbjct: 804 EDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI-------ARMKTEA 856
Query: 403 RRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNA 456
R H G F P + ++ L EEVFGP+ ++ ++ E E + T
Sbjct: 857 RLHFAGPAPEGCFVAPHIFELTEAGQLT--EEVFGPILHVVRYRPENLERVLRAIERTGY 914
Query: 457 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 514
GL + + + + ++ G + VN +I V PFGG +GL G K G
Sbjct: 915 GLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGG---NGLSGTGPKAGGP 971
Query: 515 EFL 517
+L
Sbjct: 972 HYL 974
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 186/415 (44%), Gaps = 21/415 (5%)
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF-----YAEEAKRV 170
R + L + + ++ +KE L + + GKP K+ V + GA E + +E
Sbjct: 52 RKQSLERLKEAVINNKEALYSALAEDLGKP-KDVVDLAEIGAVLHEIDFALAHLDEWVAP 110
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
P + +V+++P GV I P+N+P+ + + A+ G T ++KPSE TP
Sbjct: 111 VSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTP 170
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
P V V+ G D LL+ P I FTGS VGK +M AA
Sbjct: 171 ETSAVIEKIIAE-AFAPEYVAVIQGGR-DENSHLLSLP-FDFIFFTGSPNVGKVVMQAAA 227
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
+ V LELGG P IV DADL+ VN + KF NSGQTC+ + + V + +
Sbjct: 228 KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALL 287
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ + VK E G L+ + ++++ + +E + +VL+G + +
Sbjct: 288 ERLVERVKT-----ELPEINSTGKLVTERQVQRLVSLLE---ATQGQVLVGSQA-DVSKR 338
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG-LAAYIFTNNLQR 469
TV+ V+ + EE+FGP+ P+L F + AI N + LA Y+F ++
Sbjct: 339 ALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDV 398
Query: 470 TWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ ++ G VN ++ + PFGG+ SG+G + F K V
Sbjct: 399 AKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 185/415 (44%), Gaps = 21/415 (5%)
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF-----YAEEAKRV 170
R + L + + ++ +KE L + + GKP K+ V + GA E + +E
Sbjct: 52 RKQSLERLKEAVINNKEALYSALAEDLGKP-KDVVDLAEIGAVLHEIDFALAHLDEWVAP 110
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
P + +V+++P GV I P+N+P+ + + A+ G T ++KPSE TP
Sbjct: 111 VSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTP 170
Query: 231 XXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
P V V+ G D LL+ P I FTGS VGK +M AA
Sbjct: 171 ETSAVIEKIIAE-AFAPEYVAVIQGGR-DENSHLLSLP-FDFIFFTGSPNVGKVVMQAAA 227
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
+ V LELGG P IV DADL+ VN + KF NSGQT + + + V + +
Sbjct: 228 KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALL 287
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ + VK E G L+ + ++++ + +E + +VL+G + +
Sbjct: 288 ERLVERVKT-----ELPEINSTGKLVTERQVQRLVSLLE---ATQGQVLVGSQA-DVSKR 338
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG-LAAYIFTNNLQR 469
TV+ V+ + EE+FGP+ P+L F + AI N + LA Y+F ++
Sbjct: 339 ALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDV 398
Query: 470 TWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ ++ G VN ++ + PFGG+ SG+G + F K V
Sbjct: 399 AKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 187/426 (43%), Gaps = 22/426 (5%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDY 155
AI +A A W A+R++ K D+L + E+ + QGK + +A E+D
Sbjct: 105 AIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQA--EIDA 162
Query: 156 GAKFIEFYAEEAK---RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
A+ I+F+ AK + GE + P V + G AI+P+NF
Sbjct: 163 AAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGA 222
Query: 213 PALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRK 272
PAL G V+ KPS+ G+PP ++ V + P GD + +S +
Sbjct: 223 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCG 281
Query: 273 ITFTGSTAVGKKLMAGAAG------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 326
I FTGS K L A T +++ E GG V AD++ V+G L + F
Sbjct: 282 INFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF 341
Query: 327 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVE 385
GQ C +R+ V + ++ + + +KVGD + G +I+ A +++
Sbjct: 342 EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIK 401
Query: 386 TFVEDAVSKGAKVLLGGRRHSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 444
++E A S + +L G + + + +Y EP ++ + + + +EE+FGPV + + +
Sbjct: 402 KWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDD 461
Query: 445 E--EAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PFG 497
+ E + + + T + GL +F + + L G +N+ + V PFG
Sbjct: 462 KYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFG 521
Query: 498 GVKQSG 503
G + SG
Sbjct: 522 GARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 188/427 (44%), Gaps = 24/427 (5%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDY 155
AI +A A W A+R++ K D+L + E+ + QGK + +A E+D
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQA--EIDA 165
Query: 156 GAKFIEFY---AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
A+ I+F+ A+ A + G+ + P V + G AI+P+NF
Sbjct: 166 AAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGA 225
Query: 213 PALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRK 272
PAL G V+ KPS+ G+PP ++ V + P GD + +S +
Sbjct: 226 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG 284
Query: 273 ITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 326
I FTGS K L A T +++ E GG V AD+ V+G L + F
Sbjct: 285 INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAF 344
Query: 327 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVE 385
GQ C +R+ V ++ + + +KVGD + G +I+ + +++
Sbjct: 345 EYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIK 404
Query: 386 TFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 443
++E A S + +L G + S+G F EP ++ + + + +EE+FGPV + +
Sbjct: 405 KWLEHARSSPSLTILAGGKCDDSVGY-FVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPD 463
Query: 444 E--EEAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PF 496
+ +E + + + T + GL +F+ + ++ L G +N+ + V PF
Sbjct: 464 DKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPF 523
Query: 497 GGVKQSG 503
GG + SG
Sbjct: 524 GGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 187/427 (43%), Gaps = 24/427 (5%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDY 155
AI +A A W A+R++ K D+L + E+ + QGK + +A E+D
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQA--EIDA 165
Query: 156 GAKFIEFY---AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
A+ I+F+ A+ A + G+ + P V + G AI+P+NF
Sbjct: 166 AAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGA 225
Query: 213 PALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRK 272
PAL G V+ KPS+ G+PP ++ V + P GD + +S +
Sbjct: 226 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG 284
Query: 273 ITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 326
I FTGS K L A T +++ E GG V AD+ V+G L + F
Sbjct: 285 INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAF 344
Query: 327 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVE 385
GQ C R+ V ++ + + +KVGD + G +I+ + +++
Sbjct: 345 EYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIK 404
Query: 386 TFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 443
++E A S + +L G + S+G F EP ++ + + + +EE+FGPV + +
Sbjct: 405 KWLEHARSSPSLTILAGGKCDDSVGY-FVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPD 463
Query: 444 E--EEAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PF 496
+ +E + + + T + GL +F+ + ++ L G +N+ + V PF
Sbjct: 464 DKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPF 523
Query: 497 GGVKQSG 503
GG + SG
Sbjct: 524 GGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 187/427 (43%), Gaps = 24/427 (5%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDY 155
AI +A A W A+R++ K D+L + E+ + QGK + +A E+D
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQA--EIDA 165
Query: 156 GAKFIEFY---AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
A+ I+F+ A+ A + G+ + P V + G AI+P+NF
Sbjct: 166 AAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGA 225
Query: 213 PALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRK 272
PAL G V+ KPS+ G+PP ++ V + P GD + +S +
Sbjct: 226 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG 284
Query: 273 ITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF 326
I FTGS K L A T +++ E GG V AD+ V+G L + F
Sbjct: 285 INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAF 344
Query: 327 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVE 385
GQ C R+ V ++ + + +KVGD + G +I+ + +++
Sbjct: 345 EYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIK 404
Query: 386 TFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 443
++E A S + +L G + S+G F EP ++ + + + +EE+FGPV + +
Sbjct: 405 KWLEHARSSPSLTILAGGKCDDSVGY-FVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPD 463
Query: 444 E--EEAIHMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PF 496
+ +E + + + T + GL +F+ + ++ L G +N+ + V PF
Sbjct: 464 DKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPF 523
Query: 497 GGVKQSG 503
GG + SG
Sbjct: 524 GGARASG 530
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 178/444 (40%), Gaps = 44/444 (9%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
+ G+WI A G + + +P TG + VS G + + D + LT A+R+
Sbjct: 12 VAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAA 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI---- 174
L LL A + + + T G ++ ++D G + +YA+ + GE+
Sbjct: 71 RLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASL-GEVHALR 129
Query: 175 --IPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+L R F VL GVA I +NFP + K PAL G V+VKP+
Sbjct: 130 DGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATA 189
Query: 229 TPXXXXXXXXXXXXXGI-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKK 284
T GI PPG ++++ G++ + D Q+R ++FTGS
Sbjct: 190 TAWLTQRMVADVVDAGILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAAT 243
Query: 285 LMAGAAGTVKKVSLELGGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCAN 337
L A A + L + ++ I+ DA ++ + + SGQ C
Sbjct: 244 LRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIR 303
Query: 338 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV- 392
R V E E +A + + VG+ + V G L+++ E V E+AV
Sbjct: 304 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVL 363
Query: 393 --SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT------- 443
A L+ + V+++ + L+ EVFGPVA + ++
Sbjct: 364 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 423
Query: 444 -EEEAIHMANDTNAGLAAYIFTNN 466
E A+ +A L A I++N+
Sbjct: 424 PEAHAVALARRGQGSLVASIYSND 447
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 178/444 (40%), Gaps = 44/444 (9%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
+ G+WI A G + + +P TG + VS G + + D + LT A+R+
Sbjct: 12 VAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAA 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI---- 174
L LL A + + + T G ++ ++D G + +YA+ + GE+
Sbjct: 71 RLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASL-GEVHALR 129
Query: 175 --IPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+L R F VL GVA I +NFP + K PAL G V+VKP+
Sbjct: 130 DGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATA 189
Query: 229 TPXXXXXXXXXXXXXGI-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKK 284
T GI PPG ++++ G++ + D Q+R ++FTGS
Sbjct: 190 TAWLTQRMVADVVDAGILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAAT 243
Query: 285 LMAGAAGTVKKVSLELGGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCAN 337
L A A + L + ++ I+ DA ++ + + SGQ C
Sbjct: 244 LRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIR 303
Query: 338 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV- 392
R V E E +A + + VG+ + V G L+++ E V E+AV
Sbjct: 304 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVL 363
Query: 393 --SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT------- 443
A L+ + V+++ + L+ EVFGPVA + ++
Sbjct: 364 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 423
Query: 444 -EEEAIHMANDTNAGLAAYIFTNN 466
E A+ +A L A I++N+
Sbjct: 424 PEAHAVALARRGQGSLVASIYSND 447
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 178/444 (40%), Gaps = 44/444 (9%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
+ G+WI A G + + +P TG + VS G + + D + LT A+R+
Sbjct: 10 VAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAA 68
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI---- 174
L LL A + + + T G ++ ++D G + +YA+ + GE+
Sbjct: 69 RLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASL-GEVHALR 127
Query: 175 --IPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+L R F VL GVA I +NFP + K PAL G V+VKP+
Sbjct: 128 DGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATA 187
Query: 229 TPXXXXXXXXXXXXXGI-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKK 284
T GI PPG ++++ G++ + D Q+R ++FTGS
Sbjct: 188 TAWLTQRMVADVVDAGILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAAT 241
Query: 285 LMAGAAGTVKKVSLELGGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCAN 337
L A A + L + ++ I+ DA ++ + + SGQ C
Sbjct: 242 LRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIR 301
Query: 338 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV- 392
R V E E +A + + VG+ + V G L+++ E V E+AV
Sbjct: 302 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVL 361
Query: 393 --SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT------- 443
A L+ + V+++ + L+ EVFGPVA + ++
Sbjct: 362 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 421
Query: 444 -EEEAIHMANDTNAGLAAYIFTNN 466
E A+ +A L A I++N+
Sbjct: 422 PEAHAVALARRGQGSLVASIYSND 445
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 178/444 (40%), Gaps = 44/444 (9%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
+ G+WI A G + + +P TG + VS G + + D + LT A+R+
Sbjct: 12 VAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAA 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI---- 174
L LL A + + + T G ++ ++D G + +YA+ + GE+
Sbjct: 71 RLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASL-GEVHALR 129
Query: 175 --IPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+L R F VL GVA I +NFP + K PAL G V+VKP+
Sbjct: 130 DGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATA 189
Query: 229 TPXXXXXXXXXXXXXGI-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKK 284
T GI PPG ++++ G++ + D Q+R ++FTGS
Sbjct: 190 TAWLTQRMVADVVDAGILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAAT 243
Query: 285 LMAGAAGTVKKVSLELGGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCAN 337
L A A + L + ++ I+ DA ++ + + SGQ C
Sbjct: 244 LRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIR 303
Query: 338 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV- 392
R V E E +A + + VG+ + V G L+++ E V E+AV
Sbjct: 304 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVL 363
Query: 393 --SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT------- 443
A L+ + V+++ + L+ EVFGPVA + ++
Sbjct: 364 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 423
Query: 444 -EEEAIHMANDTNAGLAAYIFTNN 466
E A+ +A L A I++N+
Sbjct: 424 PEAHAVALARRGQGSLVASIYSND 447
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 179/454 (39%), Gaps = 57/454 (12%)
Query: 58 LIGGKWID-AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
L+ G+W+D A + H PA + V + A +A +AF ++ + ER
Sbjct: 33 LVAGEWLDGAGTFASAPAHGPAHDFAVGTVELV-----NRACEAAEEAFWTYGYSSRKER 87
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR--VYGEI 174
+ LR D + A E + ++ + E G P GE + +A+ ++
Sbjct: 88 AAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRR 147
Query: 175 IPATLPDRR------LFVLKQPVGVAGAITPWNFPLAMITR--KVGPALACGCTVVVKPS 226
+ A P+R+ + ++++PVG NFPLA T ALA GC VVVK
Sbjct: 148 VDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207
Query: 227 EFTPXX----XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
P G+ PGV +++ G + D+G AL+ P ++ + FTGS A G
Sbjct: 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGG 267
Query: 283 KKLMAGAAGTVKKVSL--ELGGNAPCIVFDDA------DLNVAVNGALAAKFRNSGQTCV 334
+ L A + + ELG P + +A L G+L +GQ C
Sbjct: 268 RALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTX---GAGQFCT 324
Query: 335 CANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393
+V EG ++F A +A+ + +G I KA + F A
Sbjct: 325 NPGIAVVIEGADADRFTTAAVEALAKVAPQTXLTDG------IAKAYRDGQARF---ATR 375
Query: 394 KGAKVLLG----GRRHSLGMTFYEPTVLSNVKSEMLVSR---EEVFGPVAPLLCFKTEEE 446
K LL GR S P + ++ L EEVFGP+ ++ + E
Sbjct: 376 NAVKPLLATESSGRDAS-------PNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAE 428
Query: 447 AIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE 478
+A L A I + +L+ R+ LE
Sbjct: 429 XEELARGFQGQLTATIHXDAGDLETARRLRPVLE 462
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 177/444 (39%), Gaps = 44/444 (9%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
+ G+WI A G + + +P TG + VS G + + D + LT A+R+
Sbjct: 12 VAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAA 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI---- 174
L LL A + + + T G ++ ++D G + +YA+ + GE+
Sbjct: 71 RLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASL-GEVHALR 129
Query: 175 --IPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+L R F VL GVA I +NFP + K PAL G V+VKP+
Sbjct: 130 DGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATA 189
Query: 229 TPXXXXXXXXXXXXXGI-PPGVVNVVMGNAPDIGDALLTSPQVRK---ITFTGSTAVGKK 284
T GI PPG ++++ G++ + D Q+R ++FTGS
Sbjct: 190 TAWLTQRMVADVVDAGILPPGALSIICGSSAGLLD------QIRSFDVVSFTGSADTAAT 243
Query: 285 LMAGAAGTVKKVSLELGGNA--PCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCAN 337
L A A + L + ++ I+ DA ++ + + SGQ
Sbjct: 244 LRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKATAIR 303
Query: 338 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV----ETFVEDAV- 392
R V E E +A + + VG+ + V G L+++ E V E+AV
Sbjct: 304 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVL 363
Query: 393 --SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT------- 443
A L+ + V+++ + L+ EVFGPVA + ++
Sbjct: 364 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 423
Query: 444 -EEEAIHMANDTNAGLAAYIFTNN 466
E A+ +A L A I++N+
Sbjct: 424 PEAHAVALARRGQGSLVASIYSND 447
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 104/267 (38%), Gaps = 32/267 (11%)
Query: 65 DAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWY 124
+A+ G+ L + P EV E A ++A + +L ++R+ LR
Sbjct: 13 NAFTGEALPLAFPVHTEV----------EVNQAATAAAKVARDFRRLNNSKRASLLRTIA 62
Query: 125 DLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR-VYGEII-------- 175
L A +++ LE P GE+ A + +A+ Y + I
Sbjct: 63 SELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTR 122
Query: 176 -PATLPD-RRLFVLKQPVGVAGAITPWNFPLAMITR--KVGPALACGCTVVVKPSEFTPX 231
P PD RR + PV V GA NFPLA ALA GC V+VK P
Sbjct: 123 APLPKPDIRRQQIALGPVAVFGAS---NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPG 179
Query: 232 XXXXXX----XXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
+P + ++ GN +G AL++ P+++ + FTGS G+ L
Sbjct: 180 TSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239
Query: 288 GAAGTVKKVSL--ELGGNAPCIVFDDA 312
A + + ELG P +F A
Sbjct: 240 LAHERPEPIPFYGELGAINPTFIFPSA 266
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS----EFTPXXXXXXXXXXXX 242
+ +PVG+ I P P + K +L ++ P T
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVA 159
Query: 243 XGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 301
G P ++ + + ++ +AL + I TG K AA + K ++ +G
Sbjct: 160 AGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK-----AAYSSGKPAIGVGA 214
Query: 302 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 354
GN P ++ + AD+ AV L +K ++G C V+V + +Y++ + F+
Sbjct: 215 GNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKERFA 267
>pdb|4DQ8|A Chain A, Crystal Structure Of Acetate Kinase Acka From
Mycobacterium Marinum
pdb|4DQ8|B Chain B, Crystal Structure Of Acetate Kinase Acka From
Mycobacterium Marinum
Length = 391
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 27/142 (19%)
Query: 377 NKAALEKV-ETFVEDAVS--KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 433
+ AAL +V E ED + V +G R G FYEPT+L++ ++ + +
Sbjct: 55 HDAALRRVFEILAEDDIDLQSCGLVAVGHRVVHGGKDFYEPTLLNDA----VIGKLDELS 110
Query: 434 PVAPL------LCFKTEEEAI----HMA-------NDTNAGLAAYIFTNNLQRTWRVSEA 476
P+APL LC + + H+A + A Y L W++
Sbjct: 111 PLAPLHNPPAVLCIRVARALLPDVPHIAVFDTAFFHQLPPAAATYAIDRELADVWKIR-- 168
Query: 477 LEYGLVGVNEGLISTEVAPFGG 498
YG G + +S + A F G
Sbjct: 169 -RYGFHGTSHEYVSQQAAEFLG 189
>pdb|2C34|A Chain A, Leishmania Mexicana Icp
Length = 116
Score = 32.0 bits (71), Expect = 0.82, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 62 KWIDAYDGKTLEVH---NPATGEVIANVSCMGGKETKDAI 98
KW+D + GKT E+H NP TG + V +G D I
Sbjct: 15 KWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEI 54
>pdb|3R9P|A Chain A, Crystal Structure Of Acka From Mycobacterium
Paratuberculosis Atcc Baa-968 K-10
pdb|3R9P|B Chain B, Crystal Structure Of Acka From Mycobacterium
Paratuberculosis Atcc Baa-968 K-10
Length = 391
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 35/132 (26%)
Query: 392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL----------LCF 441
V+ G +V+ GG TFY PTVL + +++R +APL +
Sbjct: 79 VAVGHRVVHGGN------TFYRPTVLDDA----VIARLHELSELAPLHNPPALQGIEVAR 128
Query: 442 KTEEEAIHMA-------NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA 494
+ + H+A +D A Y L W++ YG G + +S + A
Sbjct: 129 RLLPDIAHVAVFDTGFFHDLPPAAATYAIDRELADRWQIR---RYGFHGTSHRYVSEQAA 185
Query: 495 -----PFGGVKQ 501
P G+KQ
Sbjct: 186 AFLDRPLRGLKQ 197
>pdb|3NCX|A Chain A, Crystal Structure Of Ehec O157:h7 Intimin Mutant
pdb|3NCX|B Chain B, Crystal Structure Of Ehec O157:h7 Intimin Mutant
Length = 189
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 77 PATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130
P+T V++++ G K + S+ ++ +W K T++E+ G+ Y+L+ +
Sbjct: 118 PSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTSSEQRSGVSSTYNLITQY 171
>pdb|2ZQK|A Chain A, Crystal Structure Of Intimin-Tir68 Complex
pdb|2ZQK|B Chain B, Crystal Structure Of Intimin-Tir68 Complex
pdb|3NCW|A Chain A, Crystal Structure Of Ehec O157:h7 Intimin
pdb|3NCW|B Chain B, Crystal Structure Of Ehec O157:h7 Intimin
pdb|3NCW|C Chain C, Crystal Structure Of Ehec O157:h7 Intimin
pdb|3NCW|D Chain D, Crystal Structure Of Ehec O157:h7 Intimin
Length = 189
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 77 PATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130
P+T V++++ G K + S+ ++ +W K T++E+ G+ Y+L+ +
Sbjct: 118 PSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTSSEQRSGVSSTYNLITQN 171
>pdb|2ZWK|A Chain A, Crystal Structure Of Intimin-Tir90 Complex
pdb|2ZWK|C Chain C, Crystal Structure Of Intimin-Tir90 Complex
pdb|2ZWK|E Chain E, Crystal Structure Of Intimin-Tir90 Complex
Length = 184
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 77 PATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130
P+T V++++ G K + S+ ++ +W K T++E+ G+ Y+L+ +
Sbjct: 113 PSTQTVLSDIYDSWGAANKYSHYSSMNSITAWIKQTSSEQRSGVSSTYNLITQN 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,320,986
Number of Sequences: 62578
Number of extensions: 645574
Number of successful extensions: 1952
Number of sequences better than 100.0: 101
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1535
Number of HSP's gapped (non-prelim): 102
length of query: 530
length of database: 14,973,337
effective HSP length: 103
effective length of query: 427
effective length of database: 8,527,803
effective search space: 3641371881
effective search space used: 3641371881
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)