Query         009618
Match_columns 530
No_of_seqs    263 out of 1996
Neff          8.3 
Searched_HMMs 46136
Date          Thu Mar 28 15:17:56 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009618.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009618hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG2451 Aldehyde dehydrogenase 100.0  4E-122  8E-127  890.9  45.4  476   54-529    23-502 (503)
  2 KOG2450 Aldehyde dehydrogenase 100.0  5E-114  1E-118  872.8  44.3  471   55-526    21-496 (501)
  3 PRK11241 gabD succinate-semial 100.0  2E-108  4E-113  876.8  60.6  475   51-525     7-481 (482)
  4 COG1012 PutA NAD-dependent ald 100.0  4E-107  8E-112  860.5  57.3  465   56-526     2-469 (472)
  5 PLN02278 succinic semialdehyde 100.0  5E-106  1E-110  863.2  61.1  492   37-528     7-498 (498)
  6 PLN02419 methylmalonate-semial 100.0  6E-106  1E-110  864.8  59.7  472   54-527   113-591 (604)
  7 PLN02766 coniferyl-aldehyde de 100.0  3E-104  6E-109  849.2  60.1  474   54-528    20-497 (501)
  8 TIGR03374 ABALDH 1-pyrroline d 100.0  4E-104  9E-109  842.9  59.6  468   55-524     2-471 (472)
  9 cd07140 ALDH_F1L_FTFDH 10-form 100.0  3E-103  6E-108  839.0  59.5  471   55-525     6-485 (486)
 10 PLN02466 aldehyde dehydrogenas 100.0  4E-103  8E-108  844.0  60.1  474   54-528    57-534 (538)
 11 cd07113 ALDH_PADH_NahF Escheri 100.0  9E-103  2E-107  836.4  59.6  468   57-525     2-476 (477)
 12 PLN02315 aldehyde dehydrogenas 100.0  1E-102  3E-107  835.0  59.4  468   54-525    20-494 (508)
 13 PRK13252 betaine aldehyde dehy 100.0  4E-102  8E-107  834.0  59.7  471   53-525     5-480 (488)
 14 cd07142 ALDH_F2BC Arabidosis a 100.0  3E-102  6E-107  832.1  58.8  469   55-524     4-476 (476)
 15 cd07117 ALDH_StaphAldA1 Unchar 100.0  5E-102  1E-106  828.3  59.8  468   56-525     2-474 (475)
 16 PLN02467 betaine aldehyde dehy 100.0  5E-102  1E-106  831.3  60.2  472   54-525     7-488 (503)
 17 cd07559 ALDH_ACDHII_AcoD-like  100.0  6E-102  1E-106  829.3  58.8  468   56-525     2-479 (480)
 18 TIGR03216 OH_muco_semi_DH 2-hy 100.0  2E-101  3E-106  827.7  59.9  468   56-525     2-480 (481)
 19 PRK13473 gamma-aminobutyraldeh 100.0  4E-101  8E-106  824.5  59.8  470   54-525     2-473 (475)
 20 cd07085 ALDH_F6_MMSDH Methylma 100.0  5E-101  1E-105  823.6  60.0  469   56-525     2-477 (478)
 21 TIGR02299 HpaE 5-carboxymethyl 100.0  4E-101  9E-106  826.4  59.1  468   56-525     2-477 (488)
 22 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0  5E-101  1E-105  823.8  59.3  470   54-524     6-480 (481)
 23 cd07097 ALDH_KGSADH-YcbD Bacil 100.0  6E-101  1E-105  822.3  58.9  467   56-524     2-473 (473)
 24 cd07086 ALDH_F7_AASADH-like NA 100.0  9E-101  2E-105  821.0  59.6  467   57-525     1-476 (478)
 25 cd07116 ALDH_ACDHII-AcoD Ralst 100.0  1E-100  3E-105  820.3  59.6  466   56-525     2-478 (479)
 26 cd07130 ALDH_F7_AASADH NAD+-de 100.0  2E-100  4E-105  817.5  59.2  465   57-525     1-472 (474)
 27 cd07143 ALDH_AldA_AN0554 Asper 100.0  2E-100  4E-105  817.1  59.8  470   55-525     7-480 (481)
 28 TIGR01236 D1pyr5carbox1 delta- 100.0  3E-100  7E-105  821.5  57.8  473   52-526    29-521 (533)
 29 PRK13968 putative succinate se 100.0  5E-100  1E-104  810.6  58.5  456   69-526     6-461 (462)
 30 cd07144 ALDH_ALD2-YMR170C Sacc 100.0  7E-100  2E-104  815.8  60.0  470   55-525     8-483 (484)
 31 PRK09406 gabD1 succinic semial 100.0  5E-100  1E-104  809.4  57.3  453   72-525     3-457 (457)
 32 cd07088 ALDH_LactADH-AldA Esch 100.0  6E-100  1E-104  814.4  58.8  467   58-524     1-468 (468)
 33 cd07123 ALDH_F4-17_P5CDH Delta 100.0  7E-100  1E-104  819.3  59.0  470   53-525    31-519 (522)
 34 TIGR01804 BADH glycine betaine 100.0  6E-100  1E-104  813.4  57.8  462   58-520     1-467 (467)
 35 cd07119 ALDH_BADH-GbsA Bacillu 100.0  8E-100  2E-104  815.6  58.8  468   58-526     1-474 (482)
 36 cd07091 ALDH_F1-2_Ald2-like AL 100.0 1.1E-99  2E-104  813.3  59.4  469   55-524     4-476 (476)
 37 cd07151 ALDH_HBenzADH NADP+-de 100.0   1E-99  2E-104  810.9  58.7  462   61-525     1-464 (465)
 38 PRK09847 gamma-glutamyl-gamma- 100.0 1.5E-99  3E-104  812.3  59.4  471   52-525    17-492 (494)
 39 TIGR01780 SSADH succinate-semi 100.0  7E-100  1E-104  808.7  55.4  447   74-520     1-448 (448)
 40 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 2.5E-99  5E-104  815.3  59.2  469   53-525    31-511 (512)
 41 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 4.1E-99  9E-104  809.8  59.4  469   57-525     1-476 (478)
 42 TIGR01237 D1pyr5carbox2 delta- 100.0 4.1E-99  9E-104  812.8  59.3  470   53-525    31-510 (511)
 43 TIGR01722 MMSDH methylmalonic  100.0 9.6E-99  2E-103  805.3  59.6  468   56-525     2-476 (477)
 44 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 7.1E-99  2E-103  805.0  58.2  461   57-523     1-465 (466)
 45 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.3E-98  3E-103  804.4  58.5  466   57-524     1-471 (471)
 46 PRK09457 astD succinylglutamic 100.0 2.4E-98  5E-103  802.9  58.7  465   57-526     3-471 (487)
 47 PRK03137 1-pyrroline-5-carboxy 100.0 2.9E-98  6E-103  806.7  59.1  469   52-524    34-512 (514)
 48 TIGR03250 PhnAcAld_DH putative 100.0   4E-98  9E-103  798.3  58.3  460   56-525     5-471 (472)
 49 cd07128 ALDH_MaoC-N N-terminal 100.0 2.2E-98  5E-103  801.9  56.1  461   56-523     2-502 (513)
 50 PLN00412 NADP-dependent glycer 100.0 5.5E-98  1E-102  800.6  59.3  466   53-525    14-487 (496)
 51 cd07083 ALDH_P5CDH ALDH subfam 100.0 5.5E-98  1E-102  802.6  59.4  471   51-524    15-498 (500)
 52 cd07111 ALDH_F16 Aldehyde dehy 100.0 5.3E-98  1E-102  796.9  56.1  456   54-521    21-477 (480)
 53 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 6.3E-98  1E-102  792.7  56.0  449   74-524     1-455 (455)
 54 cd07110 ALDH_F10_BADH Arabidop 100.0 1.3E-97  3E-102  793.8  56.6  450   74-523     1-455 (456)
 55 cd07107 ALDH_PhdK-like Nocardi 100.0 1.5E-97  3E-102  792.7  56.9  450   74-525     1-455 (456)
 56 cd07118 ALDH_SNDH Gluconobacte 100.0 1.5E-97  3E-102  791.4  55.9  450   75-524     2-454 (454)
 57 cd07145 ALDH_LactADH_F420-Bios 100.0   2E-97  4E-102  792.2  56.0  451   72-524     1-456 (456)
 58 PF00171 Aldedh:  Aldehyde dehy 100.0 3.6E-98  8E-103  799.2  48.7  458   63-522     1-462 (462)
 59 TIGR03240 arg_catab_astD succi 100.0 6.4E-97  1E-101  792.0  58.4  465   57-526     1-469 (484)
 60 cd07150 ALDH_VaniDH_like Pseud 100.0 3.1E-97  7E-102  790.5  55.5  450   72-524     1-451 (451)
 61 cd07148 ALDH_RL0313 Uncharacte 100.0 3.7E-97  8E-102  788.5  55.7  448   73-524     2-455 (455)
 62 PRK09407 gabD2 succinic semial 100.0 5.8E-97  1E-101  797.7  57.5  467   55-525    19-491 (524)
 63 TIGR02278 PaaN-DH phenylacetic 100.0 6.5E-97  1E-101  811.7  57.7  462   56-524     2-495 (663)
 64 cd07090 ALDH_F9_TMBADH NAD+-de 100.0   1E-96  2E-101  787.0  56.3  450   74-525     1-455 (457)
 65 cd07089 ALDH_CddD-AldA-like Rh 100.0 1.1E-96  2E-101  785.7  56.1  451   74-524     1-459 (459)
 66 cd07109 ALDH_AAS00426 Uncharac 100.0 1.4E-96  3E-101  785.2  56.6  449   74-524     1-454 (454)
 67 cd07115 ALDH_HMSADH_HapE Pseud 100.0 2.4E-96  5E-101  783.3  56.9  450   75-525     2-452 (453)
 68 cd07112 ALDH_GABALDH-PuuC Esch 100.0 2.6E-96  6E-101  783.5  56.8  454   70-524     2-462 (462)
 69 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 3.3E-96  7E-101  782.0  56.7  448   75-524     1-454 (454)
 70 cd07125 ALDH_PutA-P5CDH Delta( 100.0 5.9E-96  1E-100  789.5  59.1  467   53-525    31-507 (518)
 71 cd07106 ALDH_AldA-AAD23400 Str 100.0 3.5E-96  7E-101  780.6  56.0  445   74-523     1-445 (446)
 72 PLN02174 aldehyde dehydrogenas 100.0 2.2E-96  5E-101  778.6  54.0  431   89-525     7-444 (484)
 73 cd07094 ALDH_F21_LactADH-like  100.0 3.6E-96  8E-101  782.3  55.8  447   73-524     2-453 (453)
 74 cd07102 ALDH_EDX86601 Uncharac 100.0 5.4E-96  1E-100  781.2  57.0  449   75-524     1-452 (452)
 75 PRK11903 aldehyde dehydrogenas 100.0 3.4E-96  7E-101  787.3  55.4  464   56-525     6-507 (521)
 76 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 1.4E-95  3E-100  781.5  59.5  466   55-525     2-473 (473)
 77 TIGR01238 D1pyr5carbox3 delta- 100.0 1.1E-95  2E-100  781.3  55.8  455   51-521    34-500 (500)
 78 cd07114 ALDH_DhaS Uncharacteri 100.0 1.8E-95  4E-100  777.4  56.2  451   74-524     1-457 (457)
 79 PRK11563 bifunctional aldehyde 100.0 1.3E-95  3E-100  806.6  55.6  464   54-524     4-507 (675)
 80 cd07147 ALDH_F21_RNP123 Aldehy 100.0 2.6E-95  6E-100  775.6  55.3  447   72-524     1-452 (452)
 81 cd07092 ALDH_ABALDH-YdcW Esche 100.0 4.9E-95 1.1E-99  773.4  56.9  449   74-524     1-450 (450)
 82 cd07152 ALDH_BenzADH NAD-depen 100.0 4.5E-95   1E-99  771.4  55.6  440   80-524     1-443 (443)
 83 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 7.2E-95 1.6E-99  772.6  56.7  450   74-523     1-450 (451)
 84 cd07108 ALDH_MGR_2402 Magnetos 100.0 6.2E-95 1.3E-99  773.3  55.4  449   74-524     1-457 (457)
 85 cd07099 ALDH_DDALDH Methylomon 100.0 1.1E-94 2.4E-99  771.3  57.0  447   75-523     1-452 (453)
 86 cd07146 ALDH_PhpJ Streptomyces 100.0 1.5E-94 3.2E-99  767.2  55.4  444   73-524     2-451 (451)
 87 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 2.7E-94 5.9E-99  761.5  52.9  428   94-524     1-429 (429)
 88 cd07098 ALDH_F15-22 Aldehyde d 100.0 9.8E-94 2.1E-98  765.7  57.1  450   75-525     1-464 (465)
 89 PRK11904 bifunctional proline  100.0 7.3E-94 1.6E-98  813.4  59.2  464   52-525   550-1026(1038)
 90 cd07093 ALDH_F8_HMSADH Human a 100.0 3.4E-93 7.3E-98  760.3  56.4  450   74-524     1-455 (455)
 91 cd07149 ALDH_y4uC Uncharacteri 100.0 3.6E-93 7.7E-98  760.3  55.4  448   72-524     1-453 (453)
 92 cd07126 ALDH_F12_P5CDH Delta(1 100.0 2.3E-92 4.9E-97  749.7  53.9  442   57-510     1-474 (489)
 93 PRK10090 aldehyde dehydrogenas 100.0 2.6E-92 5.7E-97  738.1  50.6  406  120-525     1-407 (409)
 94 PLN02203 aldehyde dehydrogenas 100.0 8.6E-92 1.9E-96  746.1  53.9  432   88-525     2-443 (484)
 95 PRK11809 putA trifunctional tr 100.0 5.4E-92 1.2E-96  804.1  55.5  454   51-521   643-1111(1318)
 96 cd07095 ALDH_SGSD_AstD N-succi 100.0   6E-92 1.3E-96  742.6  50.7  426   93-522     1-429 (431)
 97 cd07104 ALDH_BenzADH-like ALDH 100.0 1.6E-91 3.5E-96  742.9  53.6  429   93-524     1-431 (431)
 98 cd07105 ALDH_SaliADH Salicylal 100.0 2.4E-91 5.2E-96  740.2  53.0  427   93-524     1-432 (432)
 99 cd07135 ALDH_F14-YMR110C Sacch 100.0 2.6E-91 5.7E-96  737.6  50.0  427   89-523     2-435 (436)
100 PRK11905 bifunctional proline  100.0 7.6E-91 1.6E-95  797.0  55.6  457   52-525   552-1018(1208)
101 cd07136 ALDH_YwdH-P39616 Bacil 100.0   6E-91 1.3E-95  734.8  50.4  420   96-525     2-427 (449)
102 cd07137 ALDH_F3FHI Plant aldeh 100.0 8.5E-91 1.8E-95  732.9  51.2  423   96-524     3-432 (432)
103 PTZ00381 aldehyde dehydrogenas 100.0 2.4E-89 5.1E-94  730.6  53.3  430   89-526     4-439 (493)
104 cd07133 ALDH_CALDH_CalB Conife 100.0 2.6E-89 5.6E-94  723.2  52.4  422   97-523     3-433 (434)
105 cd07134 ALDH_AlkH-like Pseudom 100.0 3.8E-89 8.2E-94  721.7  51.0  424   96-523     2-432 (433)
106 cd07132 ALDH_F3AB Aldehyde deh 100.0 5.4E-88 1.2E-92  714.3  50.5  421   96-526     2-428 (443)
107 cd07087 ALDH_F3-13-14_CALDH-li 100.0 1.2E-86 2.6E-91  702.2  49.9  418   96-523     2-425 (426)
108 COG4230 Delta 1-pyrroline-5-ca 100.0 3.3E-86 7.2E-91  666.0  36.7  478   29-522    82-575 (769)
109 cd07129 ALDH_KGSADH Alpha-Keto 100.0 4.9E-84 1.1E-88  686.7  47.9  419   94-525     1-453 (454)
110 TIGR02288 PaaN_2 phenylacetic  100.0 1.4E-82   3E-87  679.4  50.2  429   75-520    70-541 (551)
111 cd07078 ALDH NAD(P)+ dependent 100.0 6.8E-82 1.5E-86  670.0  53.8  429   95-523     1-431 (432)
112 cd07084 ALDH_KGSADH-like ALDH  100.0 1.6E-82 3.5E-87  672.4  45.6  415   95-522     2-440 (442)
113 KOG2454 Betaine aldehyde dehyd 100.0 7.1E-83 1.5E-87  616.8  33.0  458   68-526    62-532 (583)
114 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 1.1E-80 2.4E-85  666.3  50.9  446   67-523    62-544 (549)
115 KOG2452 Formyltetrahydrofolate 100.0   2E-82 4.3E-87  626.3  31.7  450   55-525   422-880 (881)
116 cd07121 ALDH_EutE Ethanolamine 100.0   9E-81   2E-85  654.4  38.9  399   91-523     3-421 (429)
117 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 1.6E-79 3.5E-84  644.7  41.3  408   94-524     1-438 (439)
118 PRK15398 aldehyde dehydrogenas 100.0 1.1E-78 2.3E-83  643.5  40.5  407   88-525    32-453 (465)
119 cd07079 ALDH_F18-19_ProA-GPR G 100.0 1.3E-78 2.9E-83  635.3  36.0  382   96-526     2-406 (406)
120 PRK00197 proA gamma-glutamyl p 100.0 4.2E-78 9.1E-83  633.6  38.1  386   92-526     4-412 (417)
121 KOG2456 Aldehyde dehydrogenase 100.0 3.1E-77 6.6E-82  583.7  34.9  423   94-525     4-432 (477)
122 PLN02418 delta-1-pyrroline-5-c 100.0 1.4E-76 3.1E-81  654.2  44.7  382   92-526   294-697 (718)
123 TIGR02518 EutH_ACDH acetaldehy 100.0 1.2E-75 2.5E-80  623.9  45.9  414   88-526     4-445 (488)
124 cd07122 ALDH_F20_ACDH Coenzyme 100.0 2.2E-76 4.7E-81  619.8  37.6  402   94-524     1-435 (436)
125 KOG2453 Aldehyde dehydrogenase 100.0 2.9E-76 6.2E-81  561.5  25.0  466   56-525    21-493 (507)
126 PRK13805 bifunctional acetalde 100.0 3.5E-73 7.5E-78  644.6  43.2  418   85-526     5-451 (862)
127 KOG2455 Delta-1-pyrroline-5-ca 100.0 1.3E-72 2.9E-77  553.8  32.7  469   51-522    56-544 (561)
128 cd07077 ALDH-like NAD(P)+-depe 100.0 4.8E-72   1E-76  586.2  37.1  373   99-523     1-396 (397)
129 cd06534 ALDH-SF NAD(P)+-depend 100.0 1.7E-70 3.7E-75  570.5  46.3  364  100-523     2-366 (367)
130 TIGR01092 P5CS delta l-pyrroli 100.0 1.1E-70 2.4E-75  608.8  42.8  378   93-525   287-690 (715)
131 TIGR00407 proA gamma-glutamyl  100.0 1.1E-70 2.4E-75  571.0  35.7  375  101-520     1-398 (398)
132 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 6.1E-34 1.3E-38  299.5  38.0  362   90-478     3-387 (422)
133 COG0014 ProA Gamma-glutamyl ph 100.0 3.2E-32 6.8E-37  269.7  28.8  387   92-526     3-412 (417)
134 KOG4165 Gamma-glutamyl phospha  99.9 1.3E-24 2.9E-29  208.2  27.1  381   94-525     2-405 (433)
135 PF05893 LuxC:  Acyl-CoA reduct  99.8   8E-15 1.7E-19  152.7  37.2  341  110-476     2-363 (399)
136 KOG2449 Methylmalonate semiald  99.4 2.6E-13 5.7E-18  115.1   7.1  145  347-500     9-155 (157)
137 PF07368 DUF1487:  Protein of u  99.2   6E-10 1.3E-14  104.0  15.2  171  304-496     6-179 (215)
138 PRK11905 bifunctional proline   98.8 4.3E-08 9.4E-13  114.7  12.7  109  175-301  1064-1175(1208)
139 PF00815 Histidinol_dh:  Histid  97.6   0.093   2E-06   54.6  28.1  258  180-522    96-376 (412)
140 COG0141 HisD Histidinol dehydr  97.1    0.28   6E-06   50.8  24.2  256  178-519   104-383 (425)
141 PRK11809 putA trifunctional tr  97.0  0.0023   5E-08   75.9   9.2  100  181-296  1178-1277(1318)
142 cd06572 Histidinol_dh Histidin  97.0     0.6 1.3E-05   48.4  29.5  286  151-522    55-363 (390)
143 TIGR00069 hisD histidinol dehy  96.7       1 2.2E-05   46.7  27.9  284  152-522    52-359 (393)
144 PRK13770 histidinol dehydrogen  96.6     1.2 2.7E-05   46.4  29.4  258  180-522   100-380 (416)
145 PRK12447 histidinol dehydrogen  96.5     1.4 3.1E-05   46.1  27.8  286  151-522    76-385 (426)
146 PRK00877 hisD bifunctional his  96.2     2.1 4.6E-05   44.9  31.3  259  179-522   109-390 (425)
147 PRK13769 histidinol dehydrogen  95.6     3.2 6.9E-05   42.7  29.1  272  151-522    57-339 (368)
148 PLN02926 histidinol dehydrogen  95.6     3.6 7.9E-05   43.2  31.3  257  180-522   110-393 (431)
149 COG4230 Delta 1-pyrroline-5-ca  85.2       7 0.00015   42.0  10.3  104  181-301   634-737 (769)
150 KOG2450 Aldehyde dehydrogenase  83.7   0.099 2.2E-06   55.1  -3.9  142  376-520    79-240 (501)
151 PF12340 DUF3638:  Protein of u  73.0      20 0.00044   34.5   8.5   87  296-402    46-138 (229)
152 cd00532 MGS-like MGS-like doma  58.1      26 0.00055   29.6   5.5   62  237-299    35-105 (112)
153 COG5470 Uncharacterized conser  55.8      33 0.00072   28.1   5.3   22  436-457    55-76  (96)
154 PF07045 DUF1330:  Protein of u  51.7      48   0.001   24.9   5.5   45  393-456    17-61  (65)
155 PF13376 OmdA:  Bacteriocin-pro  47.4      53  0.0011   24.6   5.1   35   91-125     7-41  (63)
156 PF03295 Pox_TAA1:  Poxvirus tr  41.8      27 0.00059   25.9   2.5   29  427-455     9-37  (63)
157 KOG2697 Histidinol dehydrogena  41.1 3.9E+02  0.0084   26.9  12.0  169  179-358   115-296 (446)
158 COG0521 MoaB Molybdopterin bio  40.8      53  0.0012   30.1   4.9   50  231-281    27-79  (169)
159 PF01513 NAD_kinase:  ATP-NAD k  37.4 1.5E+02  0.0033   29.5   8.2  100  221-326     4-134 (285)
160 cd01424 MGS_CPS_II Methylglyox  36.4      75  0.0016   26.5   5.0   63  237-300    36-102 (110)
161 PRK14046 malate--CoA ligase su  35.9   3E+02  0.0066   28.9  10.4   63  262-324   303-384 (392)
162 cd01422 MGS Methylglyoxal synt  35.7      90   0.002   26.5   5.4   62  237-300    37-108 (115)
163 PLN00125 Succinyl-CoA ligase [  34.6 4.8E+02    0.01   26.3  11.1  128  217-359   150-296 (300)
164 PF06945 DUF1289:  Protein of u  34.5      44 0.00095   24.0   2.7   21  107-127    29-49  (51)
165 TIGR02667 moaB_proteo molybden  32.0      45 0.00097   30.4   3.1   50  233-282    24-76  (163)
166 cd01390 HMGB-UBF_HMG-box HMGB-  31.3 1.1E+02  0.0024   22.4   4.8   32  102-133    33-64  (66)
167 PF07287 DUF1446:  Protein of u  28.3   1E+02  0.0022   32.0   5.3  104  286-405    64-170 (362)
168 COG1438 ArgR Arginine represso  27.4 4.6E+02  0.0099   23.6  10.2   47  206-256    80-126 (150)
169 PF09011 HMG_box_2:  HMG-box do  26.0 1.7E+02  0.0036   22.4   5.0   35   99-133    34-68  (73)
170 PF07085 DRTGG:  DRTGG domain;   25.0 1.1E+02  0.0024   25.2   4.0   50  245-295    38-87  (105)
171 KOG2924 Deoxyhypusine synthase  24.9 3.5E+02  0.0076   26.8   7.7  212  251-503   106-334 (366)
172 PRK10886 DnaA initiator-associ  24.8 5.8E+02   0.013   23.9   9.6   95  204-301    27-144 (196)
173 PF00505 HMG_box:  HMG (high mo  24.7 1.7E+02  0.0036   21.7   4.7   32  103-134    34-65  (69)
174 PRK05066 arginine repressor; P  24.3 5.3E+02   0.012   23.3  10.3   42  212-256    87-128 (156)
175 PRK13938 phosphoheptose isomer  24.2 5.2E+02   0.011   24.2   8.8   98  203-301    30-148 (196)
176 smart00398 HMG high mobility g  23.6 2.1E+02  0.0046   20.9   5.2   32  103-134    35-66  (70)
177 COG2237 Predicted membrane pro  23.2      76  0.0017   32.6   3.1   93  260-358    56-150 (364)
178 PF13344 Hydrolase_6:  Haloacid  22.5 2.5E+02  0.0055   23.0   5.8   84  200-285    12-95  (101)
179 PF11672 DUF3268:  Protein of u  22.3      95  0.0021   26.0   3.0   52   72-127    40-92  (102)
180 PRK05234 mgsA methylglyoxal sy  21.8 5.6E+02   0.012   22.6   9.1   96  193-300     7-113 (142)
181 cd01388 SOX-TCF_HMG-box SOX-TC  20.6 2.3E+02   0.005   21.5   4.8   30  103-132    35-64  (72)
182 PRK10680 molybdopterin biosynt  20.4      85  0.0019   33.2   3.0   50  233-282   206-256 (411)

No 1  
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=3.9e-122  Score=890.89  Aligned_cols=476  Identities=66%  Similarity=1.052  Sum_probs=465.5

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      +.+.||+|+|+++.++++|+|.||++||.|+.+++.+.+|.++||++|.+||++|+.++..+|.++|++|.++|.+|.++
T Consensus        23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd  102 (503)
T KOG2451|consen   23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD  102 (503)
T ss_pred             chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618          134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP  213 (530)
Q Consensus       134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~  213 (530)
                      |++++++|.|||+.||++||.++..+++||++++++.+|..++...+.+..++.++|+||+++|+|||||.++..++..+
T Consensus       103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA  182 (503)
T KOG2451|consen  103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA  182 (503)
T ss_pred             HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence            99999999999999999999999999999999999999999988888899999999999999999999999999999999


Q ss_pred             HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCC---chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN---APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      ||++||+||+||+++||++++.++++.++||+|+|++|+|+++   ..++|+.|+.+|+|++|+||||+.+|+.++.+++
T Consensus       183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa  262 (503)
T KOG2451|consen  183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA  262 (503)
T ss_pred             HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999963   4589999999999999999999999999999999


Q ss_pred             cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618          291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV  370 (530)
Q Consensus       291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  370 (530)
                      .++|++++|||||.|+||++|||+|+|++..+.++|.++||.|.+.+|+|||++|||+|+++|.++++++++||.+|+++
T Consensus       263 stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~t  342 (503)
T KOG2451|consen  263 STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGT  342 (503)
T ss_pred             hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-CCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      +.||+|+..+.++++.++++|+++||++++||+.. +.+++|++|||+.+++.+|.+.+||+|||+.+|++|+|+||+|+
T Consensus       343 t~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~  422 (503)
T KOG2451|consen  343 TQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIE  422 (503)
T ss_pred             ccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHH
Confidence            99999999999999999999999999999999954 36779999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEecCCC
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR  529 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~~  529 (530)
                      ++|+++.||++|+||+|.++..+++++|++|+|.+|...+++...||||+|+||+||||+.+|+++|+..|+|++++|..
T Consensus       423 ~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L~~  502 (503)
T KOG2451|consen  423 WANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTLPI  502 (503)
T ss_pred             HhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeecCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998864


No 2  
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=4.9e-114  Score=872.85  Aligned_cols=471  Identities=46%  Similarity=0.724  Sum_probs=455.8

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      .+.||||+|+++.++++++++||.||+++++|+.++.+|++.++++|++||+  .|+.++..+|.++|++++++++++++
T Consensus        21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~  100 (501)
T KOG2450|consen   21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD  100 (501)
T ss_pred             hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence            3689999999999999999999999999999999999999999999999999  69999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618          133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV  211 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l  211 (530)
                      .|+.+.+.+.|||+.+++ .++..+++.++||+.++....+..++.. .....++.++|+|||+.|+|||||+.+..|++
T Consensus       101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~-~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl  179 (501)
T KOG2450|consen  101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTD-GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL  179 (501)
T ss_pred             HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCC-CceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence            999999999999999999 8999999999999999988877665543 35678999999999999999999999999999


Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG  291 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~  291 (530)
                      +|||++||+||+||+++||++++.++++++++|+|+||+|+|+|.|.+.+.+|++|++|++|+||||+.+|+.|+++++.
T Consensus       180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~  259 (501)
T KOG2450|consen  180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE  259 (501)
T ss_pred             hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999885


Q ss_pred             -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-cccCCCCCCC
Q 009618          292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEG  369 (530)
Q Consensus       292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~  369 (530)
                       ++|++++|||||+|.||++|||+|.|++.++.+.|+|+||+|++.+|+|||+++||+|+++++++.++ +++|||+++.
T Consensus       260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~  339 (501)
T KOG2450|consen  260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEG  339 (501)
T ss_pred             cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcc
Confidence             58999999999999999999999999999999999999999999999999999999999999999966 9999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      +.+||++++.|++++.++|+.++++||++++||.+....|+|++|||+.++.++|.+++||+||||+.|++|++.||+|+
T Consensus       340 ~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~  419 (501)
T KOG2450|consen  340 TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIE  419 (501)
T ss_pred             cccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHH
Confidence            99999999999999999999999999999999988655689999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      ++|++.|||+++|||+|.++++++++++++|+||||++...+...||||+|+||+||+.|.+++++|++.|+|+++.
T Consensus       420 ~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~  496 (501)
T KOG2450|consen  420 RANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL  496 (501)
T ss_pred             HhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999873


No 3  
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00  E-value=1.9e-108  Score=876.84  Aligned_cols=475  Identities=58%  Similarity=1.030  Sum_probs=451.7

Q ss_pred             CCccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618           51 GLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH  130 (530)
Q Consensus        51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~  130 (530)
                      .+...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++
T Consensus         7 ~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~   86 (482)
T PRK11241          7 TLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEH   86 (482)
T ss_pred             ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence            33345689999999866678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618          131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  210 (530)
                      +++|++++++|+|||+.+++.|+..+++.++||+..+++..+...+...++...+++++|+|||++|+|||||+.+.+++
T Consensus        87 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  166 (482)
T PRK11241         87 QDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK  166 (482)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHH
Confidence            99999999999999999999999999999999999988776665444334556788999999999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      +++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+++|+.|++.++
T Consensus       167 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa  246 (482)
T PRK11241        167 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA  246 (482)
T ss_pred             HHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999977788999999999999999999999999999999


Q ss_pred             cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618          291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV  370 (530)
Q Consensus       291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  370 (530)
                      +++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus       247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~  326 (482)
T PRK11241        247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV  326 (482)
T ss_pred             hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618          371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM  450 (530)
Q Consensus       371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~  450 (530)
                      ++||++++.+++++++++++++.+|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~  406 (482)
T PRK11241        327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQ  406 (482)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999999764335799999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +|+++|||++||||+|.++++++++++++|+||||++...++.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus       407 aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~  481 (482)
T PRK11241        407 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG  481 (482)
T ss_pred             hhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence            999999999999999999999999999999999999877677889999999999999999999999999999875


No 4  
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00  E-value=3.5e-107  Score=860.46  Aligned_cols=465  Identities=52%  Similarity=0.853  Sum_probs=445.1

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      +.||+|+|+....  +++++||.||+++++++.++.+|++.|+++|++||+.|+.+++.+|.++|++++++|++|+++|+
T Consensus         2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela   79 (472)
T COG1012           2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA   79 (472)
T ss_pred             CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            4699999999644  99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      +++++|+|||+.+++.|+..+++.++||++.+++..+...+... +...+++++|+|||++|+|||||+.+.+|++++||
T Consensus        80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL  158 (472)
T COG1012          80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL  158 (472)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence            99999999999999999999999999999999988777644333 67889999999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618          216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK  295 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~  295 (530)
                      ++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|++|+||||+++|+.|++.+++++||
T Consensus       159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~  238 (472)
T COG1012         159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP  238 (472)
T ss_pred             HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence            99999999999999999999999999999999999999997777999999999999999999999999999999999999


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-cccCCCCCCCcccCc
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVVQGP  374 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~~~~Gp  374 (530)
                      +++|||||||+||++|||+|.|++.+++++|+|+||+|++.+|+|||+++||+|+++|.++ ++ +++|||.|++|++||
T Consensus       239 ~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gp  317 (472)
T COG1012         239 VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGP  317 (472)
T ss_pred             EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999 65 999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC
Q 009618          375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT  454 (530)
Q Consensus       375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~  454 (530)
                      +++.++++++.+++++++.+|++++.||... . |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus       318 li~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~-~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t  395 (472)
T COG1012         318 LISEEQLDRVEGYIEDAVAEGARLLAGGKRP-G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDT  395 (472)
T ss_pred             CCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC-C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCC
Confidence            9999999999999999999999999999843 3 7999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          455 NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       455 ~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      +|||+++|||+|..++.++++++++|+||||++..  ....+||||+|.||+|+++|.+++++|++.|+|+...
T Consensus       396 ~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~  469 (472)
T COG1012         396 EYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL  469 (472)
T ss_pred             CCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence            99999999999999999999999999999999853  4467999999999999999999999999999998764


No 5  
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00  E-value=4.9e-106  Score=863.18  Aligned_cols=492  Identities=82%  Similarity=1.267  Sum_probs=465.3

Q ss_pred             cccccccchhhhccCCccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHH
Q 009618           37 SVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER  116 (530)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R  116 (530)
                      .|+.++...+++.+.+.+.++||+|+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R   86 (498)
T PLN02278          7 SMDAQSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASER   86 (498)
T ss_pred             ccccHHHHHHhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence            34444545677777777888999999998656789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEE
Q 009618          117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGA  196 (530)
Q Consensus       117 ~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~  196 (530)
                      .++|++++++|++++++|++++++|+|||..+++.|+..+++.++||+..+++..+...+...++...+++++|+|||++
T Consensus        87 ~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~  166 (498)
T PLN02278         87 SKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGA  166 (498)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEE
Confidence            99999999999999999999999999999999999999999999999999988776655544445567788999999999


Q ss_pred             ECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEee
Q 009618          197 ITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT  276 (530)
Q Consensus       197 i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ft  276 (530)
                      |+|||||+.+.++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++++.+.++.|+.||+|++|+||
T Consensus       167 I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fT  246 (498)
T PLN02278        167 ITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFT  246 (498)
T ss_pred             ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999998777888999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009618          277 GSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA  356 (530)
Q Consensus       277 Gs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~  356 (530)
                      ||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus       247 GS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~  326 (498)
T PLN02278        247 GSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKA  326 (498)
T ss_pred             CcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceE
Q 009618          357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA  436 (530)
Q Consensus       357 ~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~  436 (530)
                      ++++++|+|+++++++||++++.+++++.+++++++++|+++++||.....+++|++|||+.+++++|++++||+||||+
T Consensus       327 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl  406 (498)
T PLN02278        327 VQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVA  406 (498)
T ss_pred             HHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEE
Confidence            99999999999999999999999999999999999999999999997643357999999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhh
Q 009618          437 PLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEF  516 (530)
Q Consensus       437 ~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~  516 (530)
                      +|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+.....+.+||||+|.||+|+++|++|+++|
T Consensus       407 ~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f  486 (498)
T PLN02278        407 PLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEY  486 (498)
T ss_pred             EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999777667899999999999999999999999


Q ss_pred             heeeEEEEecCC
Q 009618          517 LEIKYVCLGDMN  528 (530)
Q Consensus       517 ~~~k~v~~~~~~  528 (530)
                      ++.|+|++++|+
T Consensus       487 t~~k~i~~~~~~  498 (498)
T PLN02278        487 LEIKYVCLGNMN  498 (498)
T ss_pred             heeEEEEEecCC
Confidence            999999998875


No 6  
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00  E-value=6.2e-106  Score=864.79  Aligned_cols=472  Identities=32%  Similarity=0.498  Sum_probs=446.9

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|++.|+++|++||+.|+.++..+|+++|++++++|++++++
T Consensus       113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~e  192 (604)
T PLN02419        113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDK  192 (604)
T ss_pred             ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence            45689999999876678899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618          134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP  213 (530)
Q Consensus       134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~  213 (530)
                      |++++++|+|||+.+++.|+..+++.++||++.+....+...+....+...+++++|+|||++|+|||||+...++++++
T Consensus       193 la~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iap  272 (604)
T PLN02419        193 LAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPV  272 (604)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHH
Confidence            99999999999999999999999999999999998877765443334556788999999999999999999999999999


Q ss_pred             HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618          214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV  293 (530)
Q Consensus       214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~  293 (530)
                      ||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+.++.|+.|++|++|+||||+.+|+.|++.+++++
T Consensus       273 ALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~l  351 (604)
T PLN02419        273 AVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKG  351 (604)
T ss_pred             HHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccC
Confidence            9999999999999999999999999999999999999999985 467899999999999999999999999999999999


Q ss_pred             ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618          294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG  373 (530)
Q Consensus       294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G  373 (530)
                      ||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|.++++++++|+|.|+++++|
T Consensus       352 k~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~G  430 (604)
T PLN02419        352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLG  430 (604)
T ss_pred             CcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence            999999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc---C-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRH---S-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~---~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      |++++.+++++.+++++|+.+||++++||...   . .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+
T Consensus       431 Plis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~  510 (604)
T PLN02419        431 PVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAIS  510 (604)
T ss_pred             CCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHH
Confidence            99999999999999999999999999999753   1 2479999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEec
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      ++|+++|||++||||+|.++++++++++++|+||||+.... .+.+||||+|.||+|  +++|.+|+++|++.|+|+++.
T Consensus       511 laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~  590 (604)
T PLN02419        511 IINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ  590 (604)
T ss_pred             HHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence            99999999999999999999999999999999999987543 467999999999999  789999999999999998875


Q ss_pred             C
Q 009618          527 M  527 (530)
Q Consensus       527 ~  527 (530)
                      -
T Consensus       591 ~  591 (604)
T PLN02419        591 K  591 (604)
T ss_pred             C
Confidence            3


No 7  
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00  E-value=3e-104  Score=849.21  Aligned_cols=474  Identities=41%  Similarity=0.676  Sum_probs=449.2

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHK  131 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~  131 (530)
                      ..+.||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+  .|+.++.++|+++|++++++|++++
T Consensus        20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~   99 (501)
T PLN02766         20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHI   99 (501)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence            45679999999876678999999999999999999999999999999999997  5999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618          132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  210 (530)
                      ++|++++++|+|||+.+++ .|+..+++.++||++.+.+..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus       100 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  178 (501)
T PLN02766        100 EELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMK  178 (501)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHH
Confidence            9999999999999999997 5999999999999999887766543322 2345678999999999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus       179 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa  258 (501)
T PLN02766        179 VAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA  258 (501)
T ss_pred             HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999977788999999999999999999999999999998


Q ss_pred             -cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618          291 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       291 -~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                       +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus       259 ~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~  338 (501)
T PLN02766        259 TSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPR  338 (501)
T ss_pred             hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence             5899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      +++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       339 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~  418 (501)
T PLN02766        339 ARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIK  418 (501)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999976433578999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEecCC
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN  528 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~  528 (530)
                      ++|+++|||++||||+|.+++.++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|++...+
T Consensus       419 ~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~~  497 (501)
T PLN02766        419 KANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYN  497 (501)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEeccc
Confidence            9999999999999999999999999999999999998777778899999999999999999999999999999887543


No 8  
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00  E-value=4.3e-104  Score=842.86  Aligned_cols=468  Identities=36%  Similarity=0.618  Sum_probs=443.8

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      .++||+|+|+.+ ++.+++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus         2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   80 (472)
T TIGR03374         2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF   80 (472)
T ss_pred             CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            467999999975 4788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618          135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP  213 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~  213 (530)
                      ++++++|+|||..++. .|+..+++.++||+..++.+.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~  160 (472)
T TIGR03374        81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP  160 (472)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence            9999999999999997 599999999999998887766543332223556789999999999999999999999999999


Q ss_pred             HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618          214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV  293 (530)
Q Consensus       214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~  293 (530)
                      ||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus       161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~  239 (472)
T TIGR03374       161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI  239 (472)
T ss_pred             HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999885 9999999999977788999999999999999999999999999999999


Q ss_pred             ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618          294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG  373 (530)
Q Consensus       294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G  373 (530)
                      ||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++|
T Consensus       240 ~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~G  319 (472)
T TIGR03374       240 KRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELG  319 (472)
T ss_pred             cceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618          374 PLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN  452 (530)
Q Consensus       374 pli~~~~~~~~~~~i~~a~~~G-a~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n  452 (530)
                      |+++..+++++.++|++++++| +++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       320 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an  399 (472)
T TIGR03374       320 PLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWAN  399 (472)
T ss_pred             CCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHh
Confidence            9999999999999999999999 799999976433478999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++|||++||||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       400 ~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~  471 (472)
T TIGR03374       400 DSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV  471 (472)
T ss_pred             CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence            999999999999999999999999999999999987777789999999999999999999999999999875


No 9  
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00  E-value=2.6e-103  Score=838.99  Aligned_cols=471  Identities=37%  Similarity=0.655  Sum_probs=446.0

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+  .|+.++..+|.++|++++++|+++++
T Consensus         6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   85 (486)
T cd07140           6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE   85 (486)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            4579999999876678999999999999999999999999999999999998  59999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCC--CC-ceeEEEEeeceEEEEECCCCcchHHHH
Q 009618          133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATL--PD-RRLFVLKQPVGVAGAITPWNFPLAMIT  208 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~--~g-~~~~~~~~P~GVv~~i~p~n~P~~~~~  208 (530)
                      +|++++++|+|||+.++. .|+..+++.++||+.++++..+...+...  ++ ...+.+++|+|||++|+|||||+...+
T Consensus        86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~  165 (486)
T cd07140          86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA  165 (486)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence            999999999999999996 69999999999999988877665443221  22 246789999999999999999999999


Q ss_pred             HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618          209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG  288 (530)
Q Consensus       209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~  288 (530)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus       166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  245 (486)
T cd07140         166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS  245 (486)
T ss_pred             HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             Hhc-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618          289 AAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG  367 (530)
Q Consensus       289 ~a~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~  367 (530)
                      ++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus       246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~  325 (486)
T cd07140         246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD  325 (486)
T ss_pred             HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence            996 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC--CHH
Q 009618          368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE  445 (530)
Q Consensus       368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~~  445 (530)
                      +++++||++++.+++++.++|++++.+||++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+  |++
T Consensus       326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~  405 (486)
T cd07140         326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVD  405 (486)
T ss_pred             CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHH
Confidence            999999999999999999999999999999999997643457899999999999999999999999999999998  699


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |||+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++||++|++.|+|+++
T Consensus       406 eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  485 (486)
T cd07140         406 GVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE  485 (486)
T ss_pred             HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence            99999999999999999999999999999999999999999877777899999999999999999999999999999874


No 10 
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00  E-value=3.9e-103  Score=843.95  Aligned_cols=474  Identities=43%  Similarity=0.679  Sum_probs=449.1

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHK  131 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~  131 (530)
                      ..+.||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+.  |+.++.++|.++|++++++|++++
T Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  136 (538)
T PLN02466         57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHN  136 (538)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhH
Confidence            346799999998767899999999999999999999999999999999999984  999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618          132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  210 (530)
                      ++|++++++|+|||+.+++ .|+..+++.++||+.++.+..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus       137 ~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~  215 (538)
T PLN02466        137 DELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWK  215 (538)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHH
Confidence            9999999999999999996 5999999999999999888776655432 2345688999999999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      +++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+.+..|+.||+|++|+||||+.+|+.|++.++
T Consensus       216 i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa  295 (538)
T PLN02466        216 VGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAA  295 (538)
T ss_pred             HhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999977788999999999999999999999999999998


Q ss_pred             c-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618          291 G-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       291 ~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                      + ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|+|++
T Consensus       296 ~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~  375 (538)
T PLN02466        296 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKG  375 (538)
T ss_pred             hcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCC
Confidence            5 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      +++||+++.++++++++++++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       376 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~  455 (538)
T PLN02466        376 VEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIR  455 (538)
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999976533578999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEecCC
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN  528 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~  528 (530)
                      ++|+++|||+++|||+|.+++.++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|++...+
T Consensus       456 ~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~  534 (538)
T PLN02466        456 RANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKN  534 (538)
T ss_pred             HHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCC
Confidence            9999999999999999999999999999999999998777777899999999999999999999999999999876543


No 11 
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00  E-value=8.8e-103  Score=836.42  Aligned_cols=468  Identities=39%  Similarity=0.649  Sum_probs=443.4

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      +||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+. |+.++.++|.++|++++++|++++++|+
T Consensus         2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela   81 (477)
T cd07113           2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELA   81 (477)
T ss_pred             CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence            589999998766788999999999999999999999999999999999985 9999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCC-----CCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618          136 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL-----PDRRLFVLKQPVGVAGAITPWNFPLAMITR  209 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~-----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~  209 (530)
                      +++++|+|||..+++. |+..+++.++|+++++....+...+...     .+...+++++|+|||++|+|||||+.+.++
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~  161 (477)
T cd07113          82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW  161 (477)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence            9999999999999985 9999999999999888776665432211     124567899999999999999999999999


Q ss_pred             HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618          210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA  289 (530)
Q Consensus       210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~  289 (530)
                      ++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++. .+..|+.|++|++|+||||+++|+.|++.+
T Consensus       162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a  240 (477)
T cd07113         162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQA  240 (477)
T ss_pred             HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998765 889999999999999999999999999999


Q ss_pred             hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618          290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                      ++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus       241 a~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  320 (477)
T cd07113         241 ASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDES  320 (477)
T ss_pred             HhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      +++||++++.+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~  400 (477)
T cd07113         321 VMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQ  400 (477)
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999976433478999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ++|+++|||+++|||+|.++++++++++++|+||||++...++.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       401 ~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         401 LINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence            9999999999999999999999999999999999998877778899999999999999999999999999999764


No 12 
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00  E-value=1.4e-102  Score=835.04  Aligned_cols=468  Identities=31%  Similarity=0.510  Sum_probs=441.6

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      ..++||||+|+.+  +.+++++||.||+++++++.++.+|++.|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus        20 ~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~   97 (508)
T PLN02315         20 NLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDY   97 (508)
T ss_pred             ccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHH
Confidence            4568999999864  68899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618          134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP  213 (530)
Q Consensus       134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~  213 (530)
                      |++++++|+|||+.+++.|+..+++.++||++.++.+.+...+...++...+..++|+|||++|+|||||+.++++++++
T Consensus        98 la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~  177 (508)
T PLN02315         98 LGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI  177 (508)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhH
Confidence            99999999999999999999999999999999888876665554333455677899999999999999999999999999


Q ss_pred             HhhcCCEEEeecCCCcHHHHHH----HHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618          214 ALACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA  289 (530)
Q Consensus       214 ALaaGN~VVlKps~~~~~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~  289 (530)
                      ||++||+||+|||+.+|+++..    +.+++.++|+|+|++|++++ +.+.++.|+.||+|++|+||||+.+|+.|++.+
T Consensus       178 ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~a  256 (508)
T PLN02315        178 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTV  256 (508)
T ss_pred             HHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence            9999999999999999999887    67888999999999999998 778899999999999999999999999999999


Q ss_pred             hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618          290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                      +.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|++++
T Consensus       257 a~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~  336 (508)
T PLN02315        257 NARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKG  336 (508)
T ss_pred             HhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      +++||+++..+.+++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus       337 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~  415 (508)
T PLN02315        337 TLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIE  415 (508)
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHH
Confidence            999999999999999999999999999999999764345799999999 5999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHh--hccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSE--ALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~--~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ++|+++|||+++|||+|.++++++++  ++++|+||||+.... .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus       416 ~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  494 (508)
T PLN02315        416 INNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN  494 (508)
T ss_pred             HHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEEEEe
Confidence            99999999999999999999999985  799999999986554 46789999999999999999999999999998875


No 13 
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00  E-value=3.5e-102  Score=833.98  Aligned_cols=471  Identities=40%  Similarity=0.650  Sum_probs=446.8

Q ss_pred             ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      ...++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|+++++
T Consensus         5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~   84 (488)
T PRK13252          5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERND   84 (488)
T ss_pred             ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            34678999999986667899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618          133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV  211 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l  211 (530)
                      +|++++++|+|||..+++ .|+..+++.++||++.+....+...+.. .+...+.+++|+|||++|+|||||+.+.++++
T Consensus        85 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~  163 (488)
T PRK13252         85 ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKS  163 (488)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence            999999999999999998 4999999999999998877666544322 24567889999999999999999999999999


Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG  291 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~  291 (530)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++. .++.|+.|++|+.|+||||+++|+.|.+.++.
T Consensus       164 ~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~  242 (488)
T PRK13252        164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA  242 (488)
T ss_pred             HHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998665 88999999999999999999999999999999


Q ss_pred             ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618          292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV  371 (530)
Q Consensus       292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~  371 (530)
                      +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus       243 ~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  322 (488)
T PRK13252        243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATN  322 (488)
T ss_pred             cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618          372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA  447 (530)
Q Consensus       372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea  447 (530)
                      +||++++.+++++++++++++.+|+++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       323 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ea  402 (488)
T PRK13252        323 FGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEV  402 (488)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHH
Confidence            99999999999999999999999999999996432    24789999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus       403 i~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~  480 (488)
T PRK13252        403 IARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVE  480 (488)
T ss_pred             HHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEe
Confidence            999999999999999999999999999999999999998776667899999999999999999999999999999875


No 14 
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3),  which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00  E-value=3e-102  Score=832.09  Aligned_cols=469  Identities=42%  Similarity=0.706  Sum_probs=445.4

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.  |+.++.++|.++|++++++|+++++
T Consensus         4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07142           4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            45799999998666789999999999999999999999999999999999975  9999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618          133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV  211 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l  211 (530)
                      +|++++++|+|||..+++ .|+..+++.++||+.++++..+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus        84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i  162 (476)
T cd07142          84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV  162 (476)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence            999999999999999997 4999999999999998887766654432 23456789999999999999999999999999


Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG  291 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~  291 (530)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|++|+.|+||||+.+|+.|++.+++
T Consensus       163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~  242 (476)
T cd07142         163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK  242 (476)
T ss_pred             HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999777789999999999999999999999999999987


Q ss_pred             -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618          292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV  370 (530)
Q Consensus       292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  370 (530)
                       +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus       243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  322 (476)
T cd07142         243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV  322 (476)
T ss_pred             cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618          371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM  450 (530)
Q Consensus       371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~  450 (530)
                      ++||++++.+++++.+++++++.+|+++++||.....+++|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~  402 (476)
T cd07142         323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKR  402 (476)
T ss_pred             cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999999999765345789999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus       403 ~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  476 (476)
T cd07142         403 ANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM  476 (476)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEeC
Confidence            99999999999999999999999999999999999887777889999999999999999999999999999863


No 15 
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00  E-value=4.9e-102  Score=828.34  Aligned_cols=468  Identities=39%  Similarity=0.654  Sum_probs=444.6

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      +.||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA   81 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence            46999999987667899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618          136 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA  214 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A  214 (530)
                      +++++|+|||+.+++. |+..+++.++||+..+++..+...+.. .+...+++++|+|||++|+|||||+.++++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A  160 (475)
T cd07117          82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA  160 (475)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence            9999999999999985 999999999999988877665543322 24456889999999999999999999999999999


Q ss_pred             hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618          215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK  294 (530)
Q Consensus       215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~  294 (530)
                      |++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.++.|+.|++|+.|+||||+.+|+.|++.++++++
T Consensus       161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~  239 (475)
T cd07117         161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI  239 (475)
T ss_pred             HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence            99999999999999999999999999985 99999999998777889999999999999999999999999999999999


Q ss_pred             eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCc
Q 009618          295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP  374 (530)
Q Consensus       295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp  374 (530)
                      |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++||
T Consensus       240 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gp  319 (475)
T cd07117         240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGA  319 (475)
T ss_pred             cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618          375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM  450 (530)
Q Consensus       375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~  450 (530)
                      ++++.+++++.+++++++.+|+++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus       320 li~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~  399 (475)
T cd07117         320 QVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDM  399 (475)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHH
Confidence            99999999999999999999999999997642    24789999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +|+++|||+++|||+|.+++.++++++++|+|+||++...++.+||||+|+||+|+++|++|+++|++.|+|++.
T Consensus       400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~  474 (475)
T cd07117         400 ANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID  474 (475)
T ss_pred             HhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence            999999999999999999999999999999999999777777899999999999999999999999999999764


No 16 
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00  E-value=5.5e-102  Score=831.31  Aligned_cols=472  Identities=44%  Similarity=0.699  Sum_probs=448.4

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhc-----HhhhcCCHHHHHHHHHHHHHHHH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-----NSWSKLTAAERSKGLRKWYDLLM  128 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~-----~~w~~~~~~~R~~iL~~~a~~l~  128 (530)
                      +.++||+|+|+.+.++.+++++||.||+++++++.++.+|+++|+++|++||     +.|+.++..+|.++|++++++|+
T Consensus         7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~   86 (503)
T PLN02467          7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT   86 (503)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence            4578999999987667899999999999999999999999999999999999     89999999999999999999999


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-CCC--CCCceeEEEEeeceEEEEECCCCcchH
Q 009618          129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-PAT--LPDRRLFVLKQPVGVAGAITPWNFPLA  205 (530)
Q Consensus       129 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~-~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~  205 (530)
                      +++++|++++++|+|||+.+++.|+..+++.++||+..++++.+... +..  ..+...+++++|+|||++|+|||||+.
T Consensus        87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~  166 (503)
T PLN02467         87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL  166 (503)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence            99999999999999999999999999999999999999988766532 111  123457889999999999999999999


Q ss_pred             HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHH
Q 009618          206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL  285 (530)
Q Consensus       206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i  285 (530)
                      +.++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.+.++.|+.|++|+.|+||||+.+|+.|
T Consensus       167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v  246 (503)
T PLN02467        167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI  246 (503)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999777889999999999999999999999999


Q ss_pred             HHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618          286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG  365 (530)
Q Consensus       286 ~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p  365 (530)
                      ++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|
T Consensus       247 ~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p  326 (503)
T PLN02467        247 MTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDP  326 (503)
T ss_pred             HHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCC
Q 009618          366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT  443 (530)
Q Consensus       366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~  443 (530)
                      +|+++++||++++.+++++.+++++++.+|+++++||....  ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       327 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~  406 (503)
T PLN02467        327 LEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFST  406 (503)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCC
Confidence            99999999999999999999999999999999999997642  2478999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          444 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       444 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      +||||+++|+++|||+++|||+|.+++.++++++++|+||||+.......+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       407 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~  486 (503)
T PLN02467        407 EDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVT  486 (503)
T ss_pred             HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEE
Confidence            99999999999999999999999999999999999999999987766678999999999999999999999999999998


Q ss_pred             Ee
Q 009618          524 LG  525 (530)
Q Consensus       524 ~~  525 (530)
                      +.
T Consensus       487 ~~  488 (503)
T PLN02467        487 KY  488 (503)
T ss_pred             Ee
Confidence            85


No 17 
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00  E-value=6.1e-102  Score=829.31  Aligned_cols=468  Identities=36%  Similarity=0.623  Sum_probs=445.5

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA   81 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            47999999987677899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618          136 QLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA  214 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A  214 (530)
                      +++++|+|||+.+++ .|+..+++.++||++......+...+.. .+...+..++|+|||++|+|||||+...++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A  160 (480)
T cd07559          82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA  160 (480)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence            999999999999997 4999999999999998877655543322 34567889999999999999999999999999999


Q ss_pred             hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618          215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK  294 (530)
Q Consensus       215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~  294 (530)
                      |++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.++++.|+.|++|++|+||||+.+|+.|++.+++++|
T Consensus       161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~  239 (480)
T cd07559         161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLI  239 (480)
T ss_pred             HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence            99999999999999999999999999996 99999999999778899999999999999999999999999999999999


Q ss_pred             eEEeecCCCccEEEecCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618          295 KVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       295 ~~~lelgG~~~~iV~~dA-----D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                      |+++|+|||||+||++||     |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|++
T Consensus       240 p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~  319 (480)
T cd07559         240 PVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPE  319 (480)
T ss_pred             cEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999     999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE  445 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~  445 (530)
                      +++||++++.+++++.+++++++.+||++++||....    ..|+|++|||+.+++++|.+++||+||||++|++|+|+|
T Consensus       320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~  399 (480)
T cd07559         320 TMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEE  399 (480)
T ss_pred             CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHH
Confidence            9999999999999999999999999999999997642    247899999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+|+++|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       400 eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  479 (480)
T cd07559         400 EAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS  479 (480)
T ss_pred             HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence            99999999999999999999999999999999999999998777777899999999999999999999999999999764


No 18 
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00  E-value=1.5e-101  Score=827.71  Aligned_cols=468  Identities=38%  Similarity=0.614  Sum_probs=442.3

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      ++||||+|+.  ++++++++||.||+++++++.++.+|++.++++|++||+. |+.++..+|.++|++++++|++++++|
T Consensus         2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   79 (481)
T TIGR03216         2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF   79 (481)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            4799999997  4789999999999999999999999999999999999997 999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCC---CCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618          135 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL---PDRRLFVLKQPVGVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~---~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  210 (530)
                      ++++++|+|||..++.. |+..+++.++||++.++...+...+...   .+...+.+++|+|||++|+|||||+...+++
T Consensus        80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~  159 (481)
T TIGR03216        80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK  159 (481)
T ss_pred             HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence            99999999999999974 9999999999999988776555432211   1345678899999999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCch-hHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGA  289 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~  289 (530)
                      +++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++. +.++.|..|++|+.|+||||+.+|+.|++.+
T Consensus       160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~a  239 (481)
T TIGR03216       160 VGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA  239 (481)
T ss_pred             HHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998654 4788999999999999999999999999999


Q ss_pred             hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618          290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                      ++++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.|++
T Consensus       240 a~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~  319 (481)
T TIGR03216       240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPA  319 (481)
T ss_pred             hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE  444 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~  444 (530)
                      +++||++++.+++++++++++++++|+++++||....     .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~  399 (481)
T TIGR03216       320 TNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSE  399 (481)
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCH
Confidence            9999999999999999999999999999999997532     24799999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ||||+++|+++|||++||||+|.++++++++++++|+||||+....++.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus       400 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~  479 (481)
T TIGR03216       400 EEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI  479 (481)
T ss_pred             HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence            99999999999999999999999999999999999999999987777789999999999999999999999999999976


Q ss_pred             e
Q 009618          525 G  525 (530)
Q Consensus       525 ~  525 (530)
                      +
T Consensus       480 ~  480 (481)
T TIGR03216       480 K  480 (481)
T ss_pred             e
Confidence            4


No 19 
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00  E-value=3.7e-101  Score=824.49  Aligned_cols=470  Identities=40%  Similarity=0.667  Sum_probs=446.0

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      +.++||||+|+.+ ++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++
T Consensus         2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~   80 (475)
T PRK13473          2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADE   80 (475)
T ss_pred             CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3467999999875 578999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618          134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG  212 (530)
Q Consensus       134 la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~  212 (530)
                      |++++++|+|||..+++ .|+..+++.+++|+..++.+.+...+....+...++.++|+|||++|+|||||+...+++++
T Consensus        81 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~  160 (475)
T PRK13473         81 FARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA  160 (475)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence            99999999999999996 49999999999999888777665433222344568899999999999999999999999999


Q ss_pred             hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618          213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT  292 (530)
Q Consensus       213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~  292 (530)
                      +||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.+.+..|+.|++|+.|+||||+++|+.|++.++++
T Consensus       161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~  239 (475)
T PRK13473        161 PALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADS  239 (475)
T ss_pred             HHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999999 999999999997788999999999999999999999999999999999


Q ss_pred             cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618          293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ  372 (530)
Q Consensus       293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~  372 (530)
                      ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++
T Consensus       240 ~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~  319 (475)
T PRK13473        240 VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTEL  319 (475)
T ss_pred             CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          373 GPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       373 Gpli~~~~~~~~~~~i~~a~~~G-a~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      ||++++.+++++.++++++..+| +++++||......|+|++|||+.++++++.+++||+||||++|++|+|+||||+++
T Consensus       320 gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~  399 (475)
T PRK13473        320 GPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWA  399 (475)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHH
Confidence            99999999999999999999999 99999997643357899999999999999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus       400 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~  473 (475)
T PRK13473        400 NDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVK  473 (475)
T ss_pred             hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEe
Confidence            99999999999999999999999999999999999887777899999999999999999999999999999875


No 20 
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00  E-value=5e-101  Score=823.61  Aligned_cols=469  Identities=35%  Similarity=0.531  Sum_probs=443.2

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~   81 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA   81 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46999999987567899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      +++++|+|||+.+++.|+..+++.++|++.......+...+....+...+..++|+|||++|+|||||+...++++++||
T Consensus        82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL  161 (478)
T cd07085          82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI  161 (478)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence            99999999999999999999999999999887766665544323355678999999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618          216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK  295 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~  295 (530)
                      ++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.|++|+.|+||||+.+|+.|++.+++++||
T Consensus       162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~  240 (478)
T cd07085         162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR  240 (478)
T ss_pred             hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCc
Confidence            9999999999999999999999999999999999999998 457889999999999999999999999999999999999


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL  375 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl  375 (530)
                      +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus       241 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpl  320 (478)
T cd07085         241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPV  320 (478)
T ss_pred             EEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      +++.+++++.+++++++.+||++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       321 i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~  400 (478)
T cd07085         321 ISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII  400 (478)
T ss_pred             cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999997532    247899999999999999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEe
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+++|||++||||+|.++++++++++++|+||||++.... +.+||||+|.||+|  +++|++|+++|++.|+|+++
T Consensus       401 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~  477 (478)
T cd07085         401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR  477 (478)
T ss_pred             hCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence            9999999999999999999999999999999999875543 57899999999999  57899999999999999764


No 21 
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00  E-value=3.9e-101  Score=826.43  Aligned_cols=468  Identities=41%  Similarity=0.682  Sum_probs=444.4

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      +.||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~   81 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA   81 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            46899999987667899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH-HHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK-RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA  214 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~-~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A  214 (530)
                      +++++|+|||+.+++.|+..+++.++|+++.+. ...+...+..  +...+..++|+|||++|+|||||+.+.++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  159 (488)
T TIGR02299        82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVD--THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA  159 (488)
T ss_pred             HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccCC--CceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence            999999999999999999999999999998887 3334433322  3456889999999999999999999999999999


Q ss_pred             hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618          215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK  294 (530)
Q Consensus       215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~  294 (530)
                      |++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+.+|+.|++.+++++|
T Consensus       160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~  239 (488)
T TIGR02299       160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK  239 (488)
T ss_pred             HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999998777888999999999999999999999999999999999


Q ss_pred             eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCc
Q 009618          295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP  374 (530)
Q Consensus       295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp  374 (530)
                      |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||
T Consensus       240 ~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp  319 (488)
T TIGR02299       240 RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGP  319 (488)
T ss_pred             eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-------CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618          375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS-------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA  447 (530)
Q Consensus       375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea  447 (530)
                      ++++.+++++.+++++++.+|+++++||....       .+++|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus       320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ea  399 (488)
T TIGR02299       320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEA  399 (488)
T ss_pred             CcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHH
Confidence            99999999999999999999999999996532       14789999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+++|+++|||++||||+|.++++++++++++|+||||+.....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus       400 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~  477 (488)
T TIGR02299       400 IEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA  477 (488)
T ss_pred             HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEe
Confidence            999999999999999999999999999999999999998777777899999999999999999999999999999875


No 22 
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00  E-value=4.8e-101  Score=823.79  Aligned_cols=470  Identities=43%  Similarity=0.678  Sum_probs=445.8

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH---hhhcCCHHHHHHHHHHHHHHHHHh
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAH  130 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~  130 (530)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+   .|+.++.++|.++|+++++.|+++
T Consensus         6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~   85 (481)
T cd07141           6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD   85 (481)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence            35679999999876788999999999999999999999999999999999998   699999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618          131 KEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR  209 (530)
Q Consensus       131 ~~~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~  209 (530)
                      .++|++++++|+|||..++ ..|+..+++.++|+++.+++..+...+.. .+...+.+++|+|||++|+|||||+...++
T Consensus        86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~  164 (481)
T cd07141          86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAW  164 (481)
T ss_pred             HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHHH
Confidence            9999999999999999766 56999999999999998888776544322 234568899999999999999999999999


Q ss_pred             HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618          210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA  289 (530)
Q Consensus       210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~  289 (530)
                      ++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.+..|+.|++|+.|+||||+.+|+.|++.+
T Consensus       165 ~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a  244 (481)
T cd07141         165 KLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAA  244 (481)
T ss_pred             HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999997778889999999999999999999999999988


Q ss_pred             hc-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCC
Q 009618          290 AG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE  368 (530)
Q Consensus       290 a~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~  368 (530)
                      +. ++||+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus       245 a~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~  324 (481)
T cd07141         245 GKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDP  324 (481)
T ss_pred             hhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            86 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH
Q 009618          369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI  448 (530)
Q Consensus       369 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai  448 (530)
                      ++++||++++.+++++.+++++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       325 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai  404 (481)
T cd07141         325 KTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVI  404 (481)
T ss_pred             CCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHH
Confidence            99999999999999999999999999999999998753347899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       449 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++|+++|||++||||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus       405 ~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         405 ERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             HHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence            9999999999999999999999999999999999999877777789999999999999999999999999999876


No 23 
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00  E-value=5.5e-101  Score=822.26  Aligned_cols=467  Identities=40%  Similarity=0.671  Sum_probs=443.3

Q ss_pred             cceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      ++||+|+|+.+  +..++++||.| |+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus         2 ~~~i~g~~~~~--~~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   79 (473)
T cd07097           2 RNYIDGEWVAG--GDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEEL   79 (473)
T ss_pred             CceECCEEecC--CCCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            46999999975  34579999994 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618          135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA  214 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A  214 (530)
                      ++++++|+|||..+++.|+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus        80 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~A  159 (473)
T cd07097          80 ARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPA  159 (473)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHH
Confidence            99999999999999999999999999999999888776654433345667899999999999999999999999999999


Q ss_pred             hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618          215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK  294 (530)
Q Consensus       215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~  294 (530)
                      |++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.|++|++|+||||+.+|+.|++.+++++|
T Consensus       160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~  239 (473)
T cd07097         160 LAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA  239 (473)
T ss_pred             HHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999999999999999777889999999999999999999999999999999999


Q ss_pred             eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCc
Q 009618          295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP  374 (530)
Q Consensus       295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp  374 (530)
                      |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++||
T Consensus       240 ~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gp  319 (473)
T cd07097         240 RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGP  319 (473)
T ss_pred             cEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618          375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN  452 (530)
Q Consensus       375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n  452 (530)
                      ++++.+++++.+++++++.+|+++++||....  .+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|
T Consensus       320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n  399 (473)
T cd07097         320 VVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIAN  399 (473)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHh
Confidence            99999999999999999999999999997643  2478999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 009618          453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++|||+++|||+|.++++++++++++|+||||+.... .+.+||||+|.||+| +++|++|+++|++.|+|++
T Consensus       400 ~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~~  473 (473)
T cd07097         400 DTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVYV  473 (473)
T ss_pred             CCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEeC
Confidence            99999999999999999999999999999999987653 468999999999999 8999999999999999863


No 24 
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00  E-value=9.2e-101  Score=821.02  Aligned_cols=467  Identities=38%  Similarity=0.634  Sum_probs=444.3

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ  136 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~  136 (530)
                      +||||+|+.+. +.+++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|++
T Consensus         1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   79 (478)
T cd07086           1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR   79 (478)
T ss_pred             CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            58999999864 68899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618          137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA  216 (530)
Q Consensus       137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa  216 (530)
                      ++++|+|||+.+++.|+..+++.++|++..++++.+...+...++...+..++|+|||++|+|||||+.+.++++++||+
T Consensus        80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa  159 (478)
T cd07086          80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV  159 (478)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988877765544334556788999999999999999999999999999999


Q ss_pred             cCCEEEeecCCCcHHHHHHHHHHHHHc----CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618          217 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT  292 (530)
Q Consensus       217 aGN~VVlKps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~  292 (530)
                      +||+||+|||+.+|+++..++++++++    |+|+|++|++++++. .++.|..|++++.|+||||+.+|+.|++.++++
T Consensus       160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~  238 (478)
T cd07086         160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVARR  238 (478)
T ss_pred             cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence            999999999999999999999999999    999999999998654 889999999999999999999999999999999


Q ss_pred             cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618          293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ  372 (530)
Q Consensus       293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~  372 (530)
                      ++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++
T Consensus       239 ~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~  318 (478)
T cd07086         239 FGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLV  318 (478)
T ss_pred             CCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC--CCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618          373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM  450 (530)
Q Consensus       373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~  450 (530)
                      ||++++.+++++.+++++++.+|+++++||.....  +++|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       319 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~  398 (478)
T cd07086         319 GPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAI  398 (478)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999976432  4789999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          451 ANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       451 ~n~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +|+++|||+++|||+|.+++++++++  +++|+||||+.... .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       399 ~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07086         399 NNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  476 (478)
T ss_pred             HhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence            99999999999999999999999999  99999999987654 46789999999999999999999999999999875


No 25 
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00  E-value=1.2e-100  Score=820.32  Aligned_cols=466  Identities=35%  Similarity=0.592  Sum_probs=439.2

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (479)
T cd07116           2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLA   81 (479)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            47999999987678899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618          136 QLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA  214 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A  214 (530)
                      .++++|+|||+.+++ .|+..+++.++||++......+...+. ..+...+.+++|+|||++|+|||||+.+.++++++|
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A  160 (479)
T cd07116          82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA  160 (479)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence            999999999999997 499999999999999887765544332 234457889999999999999999999999999999


Q ss_pred             hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618          215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK  294 (530)
Q Consensus       215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~  294 (530)
                      |++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+.+..|+.||+|++|+||||+++|+.|++.+++++|
T Consensus       161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~  239 (479)
T cd07116         161 LAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENII  239 (479)
T ss_pred             HHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999998 99999999998777889999999999999999999999999999999999


Q ss_pred             eEEeecCCCccEEEecC------CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCC
Q 009618          295 KVSLELGGNAPCIVFDD------ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE  368 (530)
Q Consensus       295 ~~~lelgG~~~~iV~~d------AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~  368 (530)
                      |+++|||||||+||++|      ||+|.|++.++++. +|+||.|++++|||||+++||+|+++|.++++++++|+|+++
T Consensus       240 p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~  318 (479)
T cd07116         240 PVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDT  318 (479)
T ss_pred             eEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999998      79999999999865 589999999999999999999999999999999999999999


Q ss_pred             CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCH
Q 009618          369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE  444 (530)
Q Consensus       369 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~  444 (530)
                      ++++||++++.+++++++++++++.+|+++++||....    .+|+|++|||+.+++ +|.+++||+||||++|++|+|+
T Consensus       319 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~  397 (479)
T cd07116         319 ETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDE  397 (479)
T ss_pred             CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCH
Confidence            99999999999999999999999999999999997642    247899999999874 9999999999999999999999


Q ss_pred             HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ||||+++|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+||++|++.|+|++
T Consensus       398 ~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~  477 (479)
T cd07116         398 EEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV  477 (479)
T ss_pred             HHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence            99999999999999999999999999999999999999999877777789999999999999999999999999999976


Q ss_pred             e
Q 009618          525 G  525 (530)
Q Consensus       525 ~  525 (530)
                      +
T Consensus       478 ~  478 (479)
T cd07116         478 S  478 (479)
T ss_pred             e
Confidence            3


No 26 
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate.  Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid.  The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00  E-value=1.7e-100  Score=817.51  Aligned_cols=465  Identities=35%  Similarity=0.600  Sum_probs=437.2

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ  136 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~  136 (530)
                      ++|+|+|+.+  +++++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++
T Consensus         1 ~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~   78 (474)
T cd07130           1 GVYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGK   78 (474)
T ss_pred             CeECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4899999984  57899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618          137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA  216 (530)
Q Consensus       137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa  216 (530)
                      ++++|+|||+.+++.|+..+++.++|+++..+.+.+...+...++...+..++|+|||++|+|||||+.++++++++||+
T Consensus        79 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa  158 (474)
T cd07130          79 LVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALV  158 (474)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHH
Confidence            99999999999999999999999999998877766655444334556788899999999999999999999999999999


Q ss_pred             cCCEEEeecCCCcHHHHHHHHHH----HHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618          217 CGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT  292 (530)
Q Consensus       217 aGN~VVlKps~~~~~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~  292 (530)
                      +||+||+|||+.+|+++..++++    +.++|+|+|++|+++++ .+.++.|++|++|++|+||||+++|+.|++.++++
T Consensus       159 aGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~  237 (474)
T cd07130         159 CGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAAR  237 (474)
T ss_pred             cCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhc
Confidence            99999999999999999887766    57999999999999984 56789999999999999999999999999999999


Q ss_pred             cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618          293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ  372 (530)
Q Consensus       293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~  372 (530)
                      ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++
T Consensus       238 ~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~  317 (474)
T cd07130         238 FGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLV  317 (474)
T ss_pred             CCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618          373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN  452 (530)
Q Consensus       373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n  452 (530)
                      ||++++.+++++++++++++++|+++++||...+.+|+|++|||+.++++ |++++||+||||++|++|+|+||||+++|
T Consensus       318 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN  396 (474)
T cd07130         318 GPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNN  396 (474)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence            99999999999999999999999999999986433478999999998766 99999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          453 DTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       453 ~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +++|||+++|||+|.+++++++++  +++|+||||..... .+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus       397 ~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~  472 (474)
T cd07130         397 EVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  472 (474)
T ss_pred             CCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence            999999999999999999999987  99999999986543 46799999999999999999999999999998765


No 27 
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00  E-value=2.1e-100  Score=817.08  Aligned_cols=470  Identities=42%  Similarity=0.698  Sum_probs=444.9

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH-hhh-cCCHHHHHHHHHHHHHHHHHhHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWS-KLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~-~w~-~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      .+.||+|+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+ .|+ .++.++|.++|+++++.|+++++
T Consensus         7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~   86 (481)
T cd07143           7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD   86 (481)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence            3579999999876678899999999999999999999999999999999998 599 99999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618          133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV  211 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l  211 (530)
                      +|++++++|+|||..++ ..|+..+++.++|+++++.+..+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus        87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~  165 (481)
T cd07143          87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI  165 (481)
T ss_pred             HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence            99999999999999655 56999999999999999887766544332 34567889999999999999999999999999


Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG  291 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~  291 (530)
                      ++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++++.+.++.|+.||+|+.|+||||+.+|+.|++.+++
T Consensus       166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~  245 (481)
T cd07143         166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK  245 (481)
T ss_pred             HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999777889999999999999999999999999998885


Q ss_pred             -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618          292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV  370 (530)
Q Consensus       292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  370 (530)
                       +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++
T Consensus       246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  325 (481)
T cd07143         246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT  325 (481)
T ss_pred             hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence             7899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618          371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM  450 (530)
Q Consensus       371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~  450 (530)
                      ++||++++.+++++.+++++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus       326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  405 (481)
T cd07143         326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR  405 (481)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999999999765335789999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus       406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~  480 (481)
T cd07143         406 ANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN  480 (481)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence            999999999999999999999999999999999999877777899999999999999999999999999999864


No 28 
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00  E-value=3.1e-100  Score=821.52  Aligned_cols=473  Identities=26%  Similarity=0.400  Sum_probs=441.8

Q ss_pred             CccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHH-H
Q 009618           52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM-A  129 (530)
Q Consensus        52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~-~  129 (530)
                      ....++||+|+|+.+ ++.+++++||.| |+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|+ +
T Consensus        29 ~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~  107 (533)
T TIGR01236        29 PIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGP  107 (533)
T ss_pred             CeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhh
Confidence            456778999999975 467899999997 8999999999999999999999999999999999999999999999999 5


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeec-eEEEEECCCCcchHHH
Q 009618          130 HKEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMI  207 (530)
Q Consensus       130 ~~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~~  207 (530)
                      ++++|++++++|+|||+.+++.| +..+++.++|++.++++..+...+....+..+++.++|+ |||++|+|||||+...
T Consensus       108 ~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~  187 (533)
T TIGR01236       108 YREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAG  187 (533)
T ss_pred             cHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHH
Confidence            99999999999999999999886 999999999999988877665332222356688999999 9999999999999999


Q ss_pred             HHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHH
Q 009618          208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA  287 (530)
Q Consensus       208 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~  287 (530)
                      .+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++
T Consensus       188 ~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~  266 (533)
T TIGR01236       188 NLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWK  266 (533)
T ss_pred             HHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence            99999999 89999999999999999999999999999999999999977789999999999999999999999999999


Q ss_pred             HHhcccce------EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccc
Q 009618          288 GAAGTVKK------VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK  361 (530)
Q Consensus       288 ~~a~~~~~------~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~  361 (530)
                      .++++++|      +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus       267 ~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~  346 (533)
T TIGR01236       267 WVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVK  346 (533)
T ss_pred             HHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCC
Confidence            99998874      999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCC--CeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEE
Q 009618          362 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL  439 (530)
Q Consensus       362 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G--a~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~  439 (530)
                      +|+|.|+++++||++++.+++++.+++++++++|  +++++||......|+|++|||+.+++++|++++||+||||++|+
T Consensus       347 ~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~  426 (533)
T TIGR01236       347 VGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVY  426 (533)
T ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEE
Confidence            9999999999999999999999999999999987  79999997643347999999999999999999999999999999


Q ss_pred             EeCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHH
Q 009618          440 CFKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKY  511 (530)
Q Consensus       440 ~~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~  511 (530)
                      +|+|  +||||+++ |+++|||+++|||+|.+++.+++++++  +|+||||......  +.+||||+|.||+| +++|.+
T Consensus       427 ~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~  506 (533)
T TIGR01236       427 VYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPL  506 (533)
T ss_pred             EeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHH
Confidence            9998  49999999 889999999999999999999999977  9999999866533  57899999999998 999999


Q ss_pred             HHHhhheeeEEEEec
Q 009618          512 GMDEFLEIKYVCLGD  526 (530)
Q Consensus       512 ~l~~~~~~k~v~~~~  526 (530)
                      ||++|++.|+|+...
T Consensus       507 ~l~~f~~~k~v~~~~  521 (533)
T TIGR01236       507 NLLRWTSARSIKETF  521 (533)
T ss_pred             HHHHhcceEEEEEEc
Confidence            999999999997753


No 29 
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00  E-value=4.5e-100  Score=810.59  Aligned_cols=456  Identities=35%  Similarity=0.540  Sum_probs=432.0

Q ss_pred             CCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 009618           69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE  148 (530)
Q Consensus        69 ~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~  148 (530)
                      .++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|+++|++++++|++|+++|++++++|+|||..+
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~   85 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ   85 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCC
Q 009618          149 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF  228 (530)
Q Consensus       149 a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~  228 (530)
                      ++.|+..+++.++||+..+.+..+... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus        86 a~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~  164 (462)
T PRK13968         86 ARAEVAKSANLCDWYAEHGPAMLKAEP-TLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN  164 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            999999999999999998876654321 1223556789999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEE
Q 009618          229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV  308 (530)
Q Consensus       229 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV  308 (530)
                      +|+++..+++++.++|+|+|++|+|++++.+ +..|+.||+|+.|+||||+++|+.|++.++.++||+++|+|||||+||
T Consensus       165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV  243 (462)
T PRK13968        165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV  243 (462)
T ss_pred             ChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEE
Confidence            9999999999999999999999999986544 456889999999999999999999999999999999999999999999


Q ss_pred             ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618          309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV  388 (530)
Q Consensus       309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i  388 (530)
                      ++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus       244 ~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i  323 (462)
T PRK13968        244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQV  323 (462)
T ss_pred             CCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618          389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ  468 (530)
Q Consensus       389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~  468 (530)
                      ++++.+|+++++||......|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       324 ~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~  403 (462)
T PRK13968        324 EATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDET  403 (462)
T ss_pred             HHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence            99999999999999764333689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      ++.++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|++..
T Consensus       404 ~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~  461 (462)
T PRK13968        404 QARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR  461 (462)
T ss_pred             HHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence            9999999999999999988777778999999999999999999999999999998764


No 30 
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00  E-value=7.2e-100  Score=815.85  Aligned_cols=470  Identities=43%  Similarity=0.714  Sum_probs=445.0

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      .++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++|++. |+.++.++|.++|+++++.|++++++
T Consensus         8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~   87 (484)
T cd07144           8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDL   87 (484)
T ss_pred             cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            45799999998656788999999999999999999999999999999999996 88999999999999999999999999


Q ss_pred             HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618          134 LGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG  212 (530)
Q Consensus       134 la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~  212 (530)
                      |++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. .+...+..++|+|||++|+|||||+..++++++
T Consensus        88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~  166 (484)
T cd07144          88 LAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLA  166 (484)
T ss_pred             HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHHHH
Confidence            9999999999998765 67999999999999999888766544332 345568899999999999999999999999999


Q ss_pred             hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618          213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT  292 (530)
Q Consensus       213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~  292 (530)
                      +||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++++.+.++.|+.|++|+.|+||||+.+|+.|++.++++
T Consensus       167 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~  246 (484)
T cd07144         167 PALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQN  246 (484)
T ss_pred             HHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999997778999999999999999999999999999999999


Q ss_pred             cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-cccCCCCCCCcc
Q 009618          293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVV  371 (530)
Q Consensus       293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~~~  371 (530)
                      +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|++++++
T Consensus       247 ~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~  326 (484)
T cd07144         247 LKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTV  326 (484)
T ss_pred             CCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999985 999999999999


Q ss_pred             cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH
Q 009618          372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI  448 (530)
Q Consensus       372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai  448 (530)
                      +||++++.+++++.+++++++.+|+++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus       327 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai  406 (484)
T cd07144         327 VGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAI  406 (484)
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHH
Confidence            99999999999999999999999999999997642   247899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       449 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +++|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus       407 ~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  483 (484)
T cd07144         407 KKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN  483 (484)
T ss_pred             HHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence            99999999999999999999999999999999999999877777899999999999999999999999999999864


No 31 
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=4.8e-100  Score=809.37  Aligned_cols=453  Identities=37%  Similarity=0.561  Sum_probs=430.5

Q ss_pred             EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      ++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   82 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA   82 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCc
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT  229 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~  229 (530)
                      |+..+++.++||++.+++..+.....  ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~  162 (457)
T PRK09406         83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV  162 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence            99999999999999988776543211  1123467889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEe
Q 009618          230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF  309 (530)
Q Consensus       230 ~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~  309 (530)
                      |+++..+++++.++|+|+|++|+|++ +.+.+..|+.|+++++|+||||+.+|+.|++.+++++||+++|+|||||+||+
T Consensus       163 p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~  241 (457)
T PRK09406        163 PQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVM  241 (457)
T ss_pred             cHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEEC
Confidence            99999999999999999999999986 44567889999999999999999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHH
Q 009618          310 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE  389 (530)
Q Consensus       310 ~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~  389 (530)
                      +|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|+++++||++++.+++++.++++
T Consensus       242 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~  321 (457)
T PRK09406        242 PSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVD  321 (457)
T ss_pred             CCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009618          390 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR  469 (530)
Q Consensus       390 ~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~  469 (530)
                      +++.+|+++++||...+.+|+|++|||+.+++++|.+++||+||||++|++|+|+||+|+++|+++|||+++|||+|.++
T Consensus       322 ~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~  401 (457)
T PRK09406        322 DAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAE  401 (457)
T ss_pred             HHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence            99999999999997753457999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          470 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       470 ~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +.++++++++|+||||+.....+.+||||+|.||+|+++|++++++|++.|+|+++
T Consensus       402 ~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  457 (457)
T PRK09406        402 QERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG  457 (457)
T ss_pred             HHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEeC
Confidence            99999999999999999887778899999999999999999999999999999764


No 32 
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00  E-value=6.5e-100  Score=814.35  Aligned_cols=467  Identities=46%  Similarity=0.765  Sum_probs=446.4

Q ss_pred             eecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009618           58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL  137 (530)
Q Consensus        58 ~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~  137 (530)
                      ||||+|+.+.++++++++||.||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|+++++.|++++++|+++
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~   80 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL   80 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            69999997666789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhc
Q 009618          138 ITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC  217 (530)
Q Consensus       138 ~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa  217 (530)
                      +++|+|||..+++.|+..+++.++|++.++.+..+...+...++...+.+++|+|||++|+|||||+...++++++||++
T Consensus        81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a  160 (468)
T cd07088          81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT  160 (468)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999998887766655544346677899999999999999999999999999999999


Q ss_pred             CCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEE
Q 009618          218 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS  297 (530)
Q Consensus       218 GN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~  297 (530)
                      ||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.++.|+.|+++++|+||||+++|+.|++.+++++||++
T Consensus       161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~  240 (468)
T cd07088         161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS  240 (468)
T ss_pred             CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence            99999999999999999999999999999999999999777788999999999999999999999999999999999999


Q ss_pred             eecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCC
Q 009618          298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN  377 (530)
Q Consensus       298 lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~  377 (530)
                      +|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||+++
T Consensus       241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~  320 (468)
T cd07088         241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVN  320 (468)
T ss_pred             EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCC
Q 009618          378 KAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA  456 (530)
Q Consensus       378 ~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~  456 (530)
                      +.+++++.+++++++.+|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|
T Consensus       321 ~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~  400 (468)
T cd07088         321 EAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY  400 (468)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCC
Confidence            99999999999999999999999997653 35789999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          457 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       457 gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ||+++|||+|.++++++++++++|+||||+.....+..||||+|.||+|+++|++|+++||+.|+|++
T Consensus       401 gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~  468 (468)
T cd07088         401 GLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL  468 (468)
T ss_pred             CceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence            99999999999999999999999999999987766677999999999999999999999999999863


No 33 
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily.  Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans,  is a mitochondrial  homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00  E-value=6.9e-100  Score=819.32  Aligned_cols=470  Identities=26%  Similarity=0.413  Sum_probs=438.3

Q ss_pred             ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH-h
Q 009618           53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-H  130 (530)
Q Consensus        53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~-~  130 (530)
                      ...++||+|+|+.+  +.+++++||.| |+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++ +
T Consensus        31 ~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~  108 (522)
T cd07123          31 VEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKY  108 (522)
T ss_pred             cccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhC
Confidence            34678999999974  67899999995 99999999999999999999999999999999999999999999999996 8


Q ss_pred             HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeec-eEEEEECCCCcchHHHH
Q 009618          131 KEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMIT  208 (530)
Q Consensus       131 ~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~~~  208 (530)
                      +++|+.++++|+|||+.++.. |+..++++++||+..+.++.+...+....+...++.++|+ |||++|+|||||+....
T Consensus       109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~  188 (522)
T cd07123         109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN  188 (522)
T ss_pred             HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence            999999999999999999964 8899999999999988877655433222256678999998 99999999999999999


Q ss_pred             HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618          209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG  288 (530)
Q Consensus       209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~  288 (530)
                      +++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.|++|++|+||||+++|+.|++.
T Consensus       189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~  267 (522)
T cd07123         189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ  267 (522)
T ss_pred             HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence            9999999 699999999999999999999999999999999999999777789999999999999999999999999999


Q ss_pred             Hhcccc------eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc
Q 009618          289 AAGTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV  362 (530)
Q Consensus       289 ~a~~~~------~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~  362 (530)
                      ++++++      ++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       268 aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~  347 (522)
T cd07123         268 IGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKM  347 (522)
T ss_pred             HHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCcc
Confidence            998877      89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCccCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEe
Q 009618          363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF  441 (530)
Q Consensus       363 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~  441 (530)
                      |+|+|+++++||+++..+++++.+++++++++ |+++++||.....+|+|++|||+.+++++|++++||+||||++|++|
T Consensus       348 G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~  427 (522)
T cd07123         348 GDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVY  427 (522)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEe
Confidence            99999999999999999999999999999999 99999999754334789999999999999999999999999999999


Q ss_pred             CC--HHHHHHHHHcCC-CCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHHH
Q 009618          442 KT--EEEAIHMANDTN-AGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGM  513 (530)
Q Consensus       442 ~~--~~eai~~~n~~~-~gL~a~v~s~d~~~~~~~a~~l--~~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l  513 (530)
                      +|  +||+|+++|++. |||++||||+|.+++.++++++  ++|+||||+....  .+.+||||+|.||+| +++|++++
T Consensus       428 ~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l  507 (522)
T cd07123         428 PDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNL  507 (522)
T ss_pred             CCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHH
Confidence            95  799999999985 9999999999999999999996  5999999987653  357899999999996 99999999


Q ss_pred             HhhheeeEEEEe
Q 009618          514 DEFLEIKYVCLG  525 (530)
Q Consensus       514 ~~~~~~k~v~~~  525 (530)
                      ++|++.|+|+..
T Consensus       508 ~~~~~~k~~~~~  519 (522)
T cd07123         508 LRWVSPRTIKET  519 (522)
T ss_pred             HHhcceEEEEEe
Confidence            999999998764


No 34 
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00  E-value=6.2e-100  Score=813.41  Aligned_cols=462  Identities=44%  Similarity=0.723  Sum_probs=440.4

Q ss_pred             eecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009618           58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL  137 (530)
Q Consensus        58 ~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~  137 (530)
                      ||+|+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|+++
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~   80 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL   80 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            69999998766789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618          138 ITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA  216 (530)
Q Consensus       138 ~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa  216 (530)
                      +++|+|||..++ ..|+..+++.++|+++.+++..+...+...+ ...+..++|+|||++|+|||||+...++++++||+
T Consensus        81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa  159 (467)
T TIGR01804        81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIP-SFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA  159 (467)
T ss_pred             HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-ceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence            999999999999 6799999999999999888766654433222 45688999999999999999999999999999999


Q ss_pred             cCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceE
Q 009618          217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV  296 (530)
Q Consensus       217 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~  296 (530)
                      +||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+++|+.|++.+++++||+
T Consensus       160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~  239 (467)
T TIGR01804       160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV  239 (467)
T ss_pred             cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence            99999999999999999999999999999999999999876789999999999999999999999999999999999999


Q ss_pred             EeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccC
Q 009618          297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI  376 (530)
Q Consensus       297 ~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli  376 (530)
                      ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++
T Consensus       240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli  319 (467)
T TIGR01804       240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLI  319 (467)
T ss_pred             EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618          377 NKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN  452 (530)
Q Consensus       377 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n  452 (530)
                      ++.+.+++.+++++++.+|+++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       320 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n  399 (467)
T TIGR01804       320 SAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARAN  399 (467)
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence            999999999999999999999999997642    2478999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheee
Q 009618          453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK  520 (530)
Q Consensus       453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  520 (530)
                      +++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+|+++|.+|+++|++.|
T Consensus       400 ~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       400 DTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence            99999999999999999999999999999999998777778999999999999999999999999876


No 35 
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00  E-value=8.1e-100  Score=815.59  Aligned_cols=468  Identities=43%  Similarity=0.681  Sum_probs=445.6

Q ss_pred             eecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        58 ~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      ||||+|+.+.++.+++++||.||+++++++.++.+|++.+++.|++||+  .|+.++..+|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   80 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA   80 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999999765678999999999999999999999999999999999997  59999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      +++++|+|||..+++.|+..+++.++|+++..++..+...+.. .+...+++++|+|||++|+|||||+...++++++||
T Consensus        81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL  159 (482)
T cd07119          81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL  159 (482)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999877655544332 355678999999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618          216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK  295 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~  295 (530)
                      ++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|+++++|+||||+.+|+.|++.+++++||
T Consensus       160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~  239 (482)
T cd07119         160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK  239 (482)
T ss_pred             hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999999999987777899999999999999999999999999999999999


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL  375 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl  375 (530)
                      +++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus       240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpl  319 (482)
T cd07119         240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL  319 (482)
T ss_pred             EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      +++.+++++++++++++++|+++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       320 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~  399 (482)
T cd07119         320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLA  399 (482)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHH
Confidence            9999999999999999999999999997532    247899999999999999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      |+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus       400 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~  474 (482)
T cd07119         400 NDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL  474 (482)
T ss_pred             hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            999999999999999999999999999999999987666778999999999999999999999999999998864


No 36 
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00  E-value=1.1e-99  Score=813.34  Aligned_cols=469  Identities=44%  Similarity=0.715  Sum_probs=444.5

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhh--hcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW--SKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w--~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      .++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+.|  +.++.++|.++|+++++.|+++++
T Consensus         4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07091           4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            467999999976667899999999999999999999999999999999999985  499999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618          133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV  211 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l  211 (530)
                      +|++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. .+...+..++|+|||++|+|||||+..+++++
T Consensus        84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~  162 (476)
T cd07091          84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL  162 (476)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence            99999999999999655 46999999999999998877766544432 35667899999999999999999999999999


Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG  291 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~  291 (530)
                      ++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|+||||+.+|+.|++.++.
T Consensus       163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~  242 (476)
T cd07091         163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK  242 (476)
T ss_pred             HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999777889999999999999999999999999999987


Q ss_pred             -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618          292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV  370 (530)
Q Consensus       292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  370 (530)
                       +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus       243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~  322 (476)
T cd07091         243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDT  322 (476)
T ss_pred             cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618          371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM  450 (530)
Q Consensus       371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~  450 (530)
                      ++||++++.+++++.+++++++.+|+++++||......++|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       323 ~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  402 (476)
T cd07091         323 FQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIER  402 (476)
T ss_pred             cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHH
Confidence            99999999999999999999999999999999765445789999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus       403 ~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~  476 (476)
T cd07091         403 ANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI  476 (476)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence            99999999999999999999999999999999999977777889999999999999999999999999999864


No 37 
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00  E-value=1e-99  Score=810.87  Aligned_cols=462  Identities=39%  Similarity=0.660  Sum_probs=440.1

Q ss_pred             CEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 009618           61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL  140 (530)
Q Consensus        61 G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~  140 (530)
                      |+|+.+.++.+++++||+||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|++++++|++++++|++++++
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~   80 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR   80 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            67887655778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCE
Q 009618          141 EQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCT  220 (530)
Q Consensus       141 e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~  220 (530)
                      |+|||+.++..|+..+++.++|++..+.+..+...+...++...+.+++|+|||++|+|||||+.+.++++++||++||+
T Consensus        81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~  160 (465)
T cd07151          81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA  160 (465)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence            99999999999999999999999988877766555443346677889999999999999999999999999999999999


Q ss_pred             EEeecCCCcHHHH-HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEee
Q 009618          221 VVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE  299 (530)
Q Consensus       221 VVlKps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~le  299 (530)
                      ||+|||+.+|+++ ..+.+++.++|+|+|++|+|++++.+++..|+.|+.+++|.||||+.+|+.|++.+++++||+++|
T Consensus       161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE  240 (465)
T cd07151         161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE  240 (465)
T ss_pred             EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence            9999999999996 789999999999999999999877788999999999999999999999999999999999999999


Q ss_pred             cCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHH
Q 009618          300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKA  379 (530)
Q Consensus       300 lgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~  379 (530)
                      +|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.
T Consensus       241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~  320 (465)
T cd07151         241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINES  320 (465)
T ss_pred             CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcE
Q 009618          380 ALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA  459 (530)
Q Consensus       380 ~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~  459 (530)
                      +++++.+++++++.+|+++++||..   +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus       321 ~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~  397 (465)
T cd07151         321 QVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLS  397 (465)
T ss_pred             HHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccce
Confidence            9999999999999999999999965   3689999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          460 AYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       460 a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ++|||+|.++++++++++++|+|+||+..... +.+||||+|.||+|+++|++||++|++.|+|++.
T Consensus       398 a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~  464 (465)
T cd07151         398 GAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ  464 (465)
T ss_pred             EEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence            99999999999999999999999999887653 6799999999999999999999999999999774


No 38 
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00  E-value=1.5e-99  Score=812.32  Aligned_cols=471  Identities=37%  Similarity=0.616  Sum_probs=446.0

Q ss_pred             CccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHH
Q 009618           52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMA  129 (530)
Q Consensus        52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~  129 (530)
                      .++.++||+|+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+  .|+.+|..+|+++|++++++|++
T Consensus        17 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~   96 (494)
T PRK09847         17 AIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEA   96 (494)
T ss_pred             ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence            4556789999999876688999999999999999999999999999999999997  59999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618          130 HKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT  208 (530)
Q Consensus       130 ~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~  208 (530)
                      ++++|++++++|+|||+.++. .|+..+++.++||++.+++..+...+.. .+...++.++|+|||++|+|||||+..++
T Consensus        97 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  175 (494)
T PRK09847         97 HAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTC  175 (494)
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHH
Confidence            999999999999999999875 5999999999999999988777654432 34456889999999999999999999999


Q ss_pred             HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618          209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG  288 (530)
Q Consensus       209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~  288 (530)
                      +++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.
T Consensus       176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~  255 (494)
T PRK09847        176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD  255 (494)
T ss_pred             HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999998


Q ss_pred             Hh-cccceEEeecCCCccEEEecCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCC
Q 009618          289 AA-GTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF  366 (530)
Q Consensus       289 ~a-~~~~~~~lelgG~~~~iV~~dA-D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~  366 (530)
                      ++ .+++|+++|+|||||+||++|+ |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus       256 aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~  335 (494)
T PRK09847        256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPL  335 (494)
T ss_pred             hhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            88 5899999999999999999997 999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHH
Q 009618          367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE  446 (530)
Q Consensus       367 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~e  446 (530)
                      ++++++||++++.+++++.+++++++.+| ++++||... ..+.|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       336 ~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e  413 (494)
T PRK09847        336 DPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ  413 (494)
T ss_pred             CCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence            99999999999999999999999999999 999998764 2467999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          447 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       447 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ||+++|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus       414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS  492 (494)
T ss_pred             HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence            9999999999999999999999999999999999999999877777899999999999999999999999999999864


No 39 
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00  E-value=6.6e-100  Score=808.66  Aligned_cols=447  Identities=65%  Similarity=1.066  Sum_probs=428.7

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV  153 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev  153 (530)
                      ++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev   80 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI   80 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618          154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA  233 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~  233 (530)
                      ..+++.++|++...++..+...+....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~  160 (448)
T TIGR01780        81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA  160 (448)
T ss_pred             HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence            99999999999988887766554434456677889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCccEEeecCC-chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          234 LAAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       234 ~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      ..+++++.++|+|+|++|+++++ +.+.++.|+.|+++++|+||||+.+|+.|++.++.++||+++|+|||||+||++||
T Consensus       161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da  240 (448)
T TIGR01780       161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA  240 (448)
T ss_pred             HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence            99999999999999999999986 67888999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.+++++++
T Consensus       241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~  320 (448)
T TIGR01780       241 DIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV  320 (448)
T ss_pred             CHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618          393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR  472 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~  472 (530)
                      ++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus       321 ~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~  400 (448)
T TIGR01780       321 EKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWR  400 (448)
T ss_pred             HCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHH
Confidence            99999999997643357899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheee
Q 009618          473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK  520 (530)
Q Consensus       473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k  520 (530)
                      +++++++|+||||++...++.+||||+|.||+|+++|.+|+++|++.|
T Consensus       401 ~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       401 VAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            999999999999998777778999999999999999999999999976


No 40 
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00  E-value=2.5e-99  Score=815.28  Aligned_cols=469  Identities=35%  Similarity=0.564  Sum_probs=444.2

Q ss_pred             ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618           53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK  131 (530)
Q Consensus        53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~  131 (530)
                      ...+.||||+|+.+  +.+++++||+| |+++++++.++.+|++.+++.|++||+.|+.++..+|.++|++++++|++++
T Consensus        31 ~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~  108 (512)
T cd07124          31 REYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRR  108 (512)
T ss_pred             cccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence            34578999999974  67899999998 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618          132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV  211 (530)
Q Consensus       132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l  211 (530)
                      ++|++++++|+|||..+++.|+..+++.++||++.+++..+...+.. .+...+++++|+|||++|+|||||+.+.++++
T Consensus       109 ~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i  187 (512)
T cd07124         109 FELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMV-PGEDNRYVYRPLGVGAVISPWNFPLAILAGMT  187 (512)
T ss_pred             HHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence            99999999999999999999999999999999999988755544322 35678899999999999999999999999999


Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG  291 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~  291 (530)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|+||||+.+|+.|++.+++
T Consensus       188 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~  267 (512)
T cd07124         188 TAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAK  267 (512)
T ss_pred             HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999777889999999999999999999999999999886


Q ss_pred             ------ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618          292 ------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG  365 (530)
Q Consensus       292 ------~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p  365 (530)
                            ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       268 ~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  347 (512)
T cd07124         268 VQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP  347 (512)
T ss_pred             ccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence                  68999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC--CCceEeceEecCCCCCCcccccccccceEEEEEeCC
Q 009618          366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT  443 (530)
Q Consensus       366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~  443 (530)
                      .|+++++||++++.+++++.+++++++. |+++++||.....  +|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus       348 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~  426 (512)
T cd07124         348 EDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKD  426 (512)
T ss_pred             CCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCC
Confidence            9999999999999999999999999988 9999999976532  579999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHHHHhhheee
Q 009618          444 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIK  520 (530)
Q Consensus       444 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k  520 (530)
                      +||+|+++|+++|||+++|||+|.+++.++++++++|+||||+....  .+.+||||+|+||+| +++|.+|+++||+.|
T Consensus       427 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k  506 (512)
T cd07124         427 FDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPK  506 (512)
T ss_pred             HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEE
Confidence            99999999999999999999999999999999999999999987653  356899999999999 889999999999999


Q ss_pred             EEEEe
Q 009618          521 YVCLG  525 (530)
Q Consensus       521 ~v~~~  525 (530)
                      +|+++
T Consensus       507 ~v~~~  511 (512)
T cd07124         507 TVTEN  511 (512)
T ss_pred             EEEEe
Confidence            99875


No 41 
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00  E-value=4.1e-99  Score=809.78  Aligned_cols=469  Identities=43%  Similarity=0.735  Sum_probs=445.4

Q ss_pred             ceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      +||||+|+.+.++++++++||.| ++++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|+
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela   80 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA   80 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999765678999999999 68999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      +++++|+|||+.+++.|+..+++.++|++...+.+.+...+...++...+.+++|+|||++|+|||||+.+.++++++||
T Consensus        81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL  160 (478)
T cd07131          81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL  160 (478)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988877665544333345678999999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618          216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK  295 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~  295 (530)
                      ++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+.+|+.|++.+++++||
T Consensus       161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~  240 (478)
T cd07131         161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR  240 (478)
T ss_pred             HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence            99999999999999999999999999999999999999987777899999999999999999999999999999999999


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL  375 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl  375 (530)
                      +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus       241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl  320 (478)
T cd07131         241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPL  320 (478)
T ss_pred             EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      +++.+++++.+++++++.+|+++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       321 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~  400 (478)
T cd07131         321 INEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIA  400 (478)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999997532    247899999999999999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+++|||+++|||+|.++++++++++++|+||||+.... .+.+||||+|+||+| +++|.+|+++|++.|+|+++
T Consensus       401 n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07131         401 NDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD  476 (478)
T ss_pred             hCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence            999999999999999999999999999999999987764 468999999999999 88999999999999999875


No 42 
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00  E-value=4.1e-99  Score=812.76  Aligned_cols=470  Identities=31%  Similarity=0.517  Sum_probs=442.1

Q ss_pred             ccccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618           53 LRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK  131 (530)
Q Consensus        53 ~~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~  131 (530)
                      ...++||+|+|+.+  +.+++++||. ||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|++++++|++++
T Consensus        31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~  108 (511)
T TIGR01237        31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRR  108 (511)
T ss_pred             cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence            34567999999974  5679999999 49999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618          132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV  211 (530)
Q Consensus       132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l  211 (530)
                      ++|++++++|+|||+.++..|+..+++.++||++.+++..+...+....+...+++++|+|||++|+|||||+..+++++
T Consensus       109 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i  188 (511)
T TIGR01237       109 HELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMT  188 (511)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHH
Confidence            99999999999999999999999999999999999888766543333345677899999999999999999999999999


Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh-
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-  290 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-  290 (530)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|.||||+.+|+.|++.++ 
T Consensus       189 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~  268 (511)
T TIGR01237       189 VAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAK  268 (511)
T ss_pred             HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999977789999999999999999999999999999887 


Q ss_pred             -----cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618          291 -----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG  365 (530)
Q Consensus       291 -----~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p  365 (530)
                           ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|
T Consensus       269 ~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~  348 (511)
T TIGR01237       269 VQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPT  348 (511)
T ss_pred             ccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence                 578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618          366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE  445 (530)
Q Consensus       366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~  445 (530)
                      .++++++||++++.+++++.+++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       349 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~d  427 (511)
T TIGR01237       349 DDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFD  427 (511)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHH
Confidence            999999999999999999999999999888 8999886543347899999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCCC-CChHHHHHhhheeeEE
Q 009618          446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYV  522 (530)
Q Consensus       446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v  522 (530)
                      |||+++|+++|||+++|||+|.+++.++++++++|+||||+....  .+.+||||+|.||+|+ ++|++++++|++.|+|
T Consensus       428 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v  507 (511)
T TIGR01237       428 EALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTV  507 (511)
T ss_pred             HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEE
Confidence            999999999999999999999999999999999999999987653  2468999999999996 7999999999999999


Q ss_pred             EEe
Q 009618          523 CLG  525 (530)
Q Consensus       523 ~~~  525 (530)
                      +.+
T Consensus       508 ~~~  510 (511)
T TIGR01237       508 TEN  510 (511)
T ss_pred             EEe
Confidence            764


No 43 
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00  E-value=9.6e-99  Score=805.26  Aligned_cols=468  Identities=32%  Similarity=0.493  Sum_probs=442.6

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      ++||+|+|+.+.++++++++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~   81 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA   81 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46999999987667899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      +++++|+|||+.+++.|+..+++.++|++.....+.+...+...++...+.+++|+|||++|+|||||+.+.++++++||
T Consensus        82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL  161 (477)
T TIGR01722        82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI  161 (477)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence            99999999999999999999999999999888877666544333355677899999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618          216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK  295 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~  295 (530)
                      ++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++ +.+.++.|+.||+|+.|+||||+.+|+.|.+.++.++||
T Consensus       162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~  240 (477)
T TIGR01722       162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKR  240 (477)
T ss_pred             hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCe
Confidence            9999999999999999999999999999999999999998 456788999999999999999999999999999999999


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL  375 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl  375 (530)
                      +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.++++++||+
T Consensus       241 v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~  319 (477)
T TIGR01722       241 VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPL  319 (477)
T ss_pred             EEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      +++.+++++.+++++++++|+++++||....    .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++
T Consensus       320 i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~  399 (477)
T TIGR01722       320 ITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALI  399 (477)
T ss_pred             cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999997631    247899999999999999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEe
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+++|||+++|||+|.++++++++++++|+||||++.... +.+||||+|.||+|  +++|.+++++||+.|+|+++
T Consensus       400 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~  476 (477)
T TIGR01722       400 NASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR  476 (477)
T ss_pred             hCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence            9999999999999999999999999999999999865543 67899999999999  57899999999999999875


No 44 
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00  E-value=7.1e-99  Score=805.03  Aligned_cols=461  Identities=40%  Similarity=0.657  Sum_probs=437.9

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ  136 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~  136 (530)
                      +||+|+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.+|..+|.++|++++++|++++++|++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~   80 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ   80 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            48999999876678899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          137 LITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       137 ~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      ++++|+|||..++. .|+..+++.++|+++..+.+.+...     ....+.+++|+|||++|+|||||+.++++++++||
T Consensus        81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL  155 (466)
T cd07138          81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL  155 (466)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence            99999999999986 4999999999999988876644321     23457789999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618          216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK  295 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~  295 (530)
                      ++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.++++.|+.|++++.|+||||+.+|+.|++.++.+++|
T Consensus       156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~  235 (466)
T cd07138         156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR  235 (466)
T ss_pred             hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence            99999999999999999999999999999999999999987778899999999999999999999999999999999999


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL  375 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl  375 (530)
                      +++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||+
T Consensus       236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl  315 (466)
T cd07138         236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL  315 (466)
T ss_pred             EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618          376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN  452 (530)
Q Consensus       376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n  452 (530)
                      +++.+++++.+++++++++|+++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       316 i~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n  395 (466)
T cd07138         316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIAN  395 (466)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHh
Confidence            9999999999999999999999999996432   2478999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      +++|||+++|||+|.+++.++++++++|+||||+.. ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       396 ~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  465 (466)
T cd07138         396 DTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             CCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence            999999999999999999999999999999999864 5678999999999999999999999999999875


No 45 
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase  AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase  PDB structure,  3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase  AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00  E-value=1.3e-98  Score=804.38  Aligned_cols=466  Identities=39%  Similarity=0.655  Sum_probs=439.1

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      +||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.  |+.++.++|.++|++++++|++++++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   80 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL   80 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            489999998655688999999999999999999999999999999999985  999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618          135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP  213 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~  213 (530)
                      ++++++|+|||..++. .|+..+++.++||++.+++..+........+...+..++|+|||++|+|||||+.+.++++++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~  160 (471)
T cd07139          81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP  160 (471)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence            9999999999998775 499999999999999887765432211112456788999999999999999999999999999


Q ss_pred             HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618          214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV  293 (530)
Q Consensus       214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~  293 (530)
                      ||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++
T Consensus       161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~  239 (471)
T cd07139         161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERL  239 (471)
T ss_pred             HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999998 5678899999999999999999999999999999999


Q ss_pred             ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618          294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG  373 (530)
Q Consensus       294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G  373 (530)
                      ||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++|
T Consensus       240 ~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  319 (471)
T cd07139         240 ARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIG  319 (471)
T ss_pred             CEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      |++++.+++++.+++++++.+|+++++||....  .+++|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       320 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~  399 (471)
T cd07139         320 PLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIA  399 (471)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHH
Confidence            999999999999999999999999999997643  247899999999999999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      |+++|||+++|||+|.+++.++++++++|+|+||+.. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus       400 n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~~  471 (471)
T cd07139         400 NDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIYL  471 (471)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEeC
Confidence            9999999999999999999999999999999999876 56789999999999999999999999999999863


No 46 
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=2.4e-98  Score=802.92  Aligned_cols=465  Identities=31%  Similarity=0.483  Sum_probs=433.9

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ  136 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~  136 (530)
                      +||||+|+.+ ++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++
T Consensus         3 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   81 (487)
T PRK09457          3 LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE   81 (487)
T ss_pred             ceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            6899999875 367899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618          137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA  216 (530)
Q Consensus       137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa  216 (530)
                      ++++|+|||+.+++.|+..+++.++|++....+..+...+. .++...+++++|+|||++|+|||||+..+++++++||+
T Consensus        82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa  160 (487)
T PRK09457         82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL  160 (487)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988876665544322 23556788999999999999999999999999999999


Q ss_pred             cCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc-cce
Q 009618          217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK  295 (530)
Q Consensus       217 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~-~~~  295 (530)
                      +||+||+|||+.+|+++..+++++.++|+|+|++|+|++ +.+.+..|+.|++|+.|+||||+++|+.|++.++++ .++
T Consensus       161 aGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~  239 (487)
T PRK09457        161 AGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI  239 (487)
T ss_pred             cCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence            999999999999999999999999999999999999998 567899999999999999999999999999987755 578


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhccccCCCC-CCCcccC
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGF-GEGVVQG  373 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p~-~~~~~~G  373 (530)
                      +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|+ ++++++|
T Consensus       240 ~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~G  319 (487)
T PRK09457        240 LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMG  319 (487)
T ss_pred             EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccC
Confidence            899999999999999999999999999999999999999999999999998 99999999999999999997 7889999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc
Q 009618          374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND  453 (530)
Q Consensus       374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~  453 (530)
                      |+++..+++++.+++++++++|+++++||...+.+++|++|||+ +++++|++++||+||||++|++|+|+||||+++|+
T Consensus       320 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~  398 (487)
T PRK09457        320 AVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANN  398 (487)
T ss_pred             CCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence            99999999999999999999999999988654345789999999 69999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       454 ~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      ++|||+++|||+|.++++++++++++|+||||+..... +.+||||+|.||+|+++|. ...+|++.|++++..
T Consensus       399 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~-~~~~~~~~k~~~~~~  471 (487)
T PRK09457        399 TRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAY-YAADYCAYPMASLES  471 (487)
T ss_pred             CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCch-hHhhheeeeEEEEec
Confidence            99999999999999999999999999999999876543 5789999999999999995 556699999998773


No 47 
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00  E-value=2.9e-98  Score=806.67  Aligned_cols=469  Identities=31%  Similarity=0.514  Sum_probs=439.9

Q ss_pred             CccccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618           52 LLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH  130 (530)
Q Consensus        52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~  130 (530)
                      ....+.||+|+|+.+  +++++++||+ ||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|+++
T Consensus        34 ~~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~  111 (514)
T PRK03137         34 GQDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRR  111 (514)
T ss_pred             ccccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence            345568999999974  6789999999 6999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618          131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  210 (530)
                      +++|++++++|+|||..+++.|+..+++.++||+..+.+..+........+...+++++|+|||++|+|||||+..++++
T Consensus       112 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  191 (514)
T PRK03137        112 KHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM  191 (514)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence            99999999999999999999999999999999999987764222111224667889999999999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++|++|+||||+.+|+.|++.++
T Consensus       192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa  271 (514)
T PRK03137        192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA  271 (514)
T ss_pred             HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999977788999999999999999999999999999988


Q ss_pred             c------ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCC
Q 009618          291 G------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD  364 (530)
Q Consensus       291 ~------~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~  364 (530)
                      +      ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       272 ~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~  351 (514)
T PRK03137        272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGN  351 (514)
T ss_pred             cccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCC
Confidence            6      6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCH
Q 009618          365 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE  444 (530)
Q Consensus       365 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~  444 (530)
                      |.+++ ++||++++.+++++.+++++++.+ +++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       352 p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~  429 (514)
T PRK03137        352 PEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDF  429 (514)
T ss_pred             CCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCH
Confidence            99998 999999999999999999999887 6999999764335799999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHHHHhhheeeE
Q 009618          445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKY  521 (530)
Q Consensus       445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~  521 (530)
                      ||||+++|+++|||++||||+|.++++++++++++|+||||+....  .+.+||||+|.||+| +++|.++|++|++.|+
T Consensus       430 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~  509 (514)
T PRK03137        430 DHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKT  509 (514)
T ss_pred             HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEE
Confidence            9999999999999999999999999999999999999999987553  346899999999999 6899999999999999


Q ss_pred             EEE
Q 009618          522 VCL  524 (530)
Q Consensus       522 v~~  524 (530)
                      |+.
T Consensus       510 v~~  512 (514)
T PRK03137        510 VSE  512 (514)
T ss_pred             EEE
Confidence            865


No 48 
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00  E-value=4e-98  Score=798.29  Aligned_cols=460  Identities=38%  Similarity=0.595  Sum_probs=432.0

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      ..||||+|+.  ++++++++||.||+++++++.++.+|++.|+++|++|+   +.++..+|.++|++++++|++++++|+
T Consensus         5 ~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela   79 (472)
T TIGR03250         5 ALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS   79 (472)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            4689999986  36889999999999999999999999999999998875   578999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCC----CCCCceeEEEEeec-eEEEEECCCCcchHHHHHH
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA----TLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~----~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~  210 (530)
                      +++++|+|||+.+++.|+..+++.++||+..+.+..+...+.    ...+...+..++|+ |||++|+|||||+.+++++
T Consensus        80 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~  159 (472)
T TIGR03250        80 DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHK  159 (472)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHH
Confidence            999999999999999999999999999999887766544321    11234568899998 9999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.++
T Consensus       160 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~  239 (472)
T TIGR03250       160 IAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG  239 (472)
T ss_pred             HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999877788999999999999999999999999998875


Q ss_pred             cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618          291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV  370 (530)
Q Consensus       291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  370 (530)
                        .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus       240 --~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  317 (472)
T TIGR03250       240 --YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSV  317 (472)
T ss_pred             --CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence              789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618          371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM  450 (530)
Q Consensus       371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~  450 (530)
                      ++||++++.+++++++++++++.+|+++++||...   |+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       318 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~---g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~  394 (472)
T TIGR03250       318 DMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRD---GALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRI  394 (472)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC---CEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999998653   789999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009618          451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +|+++|||++||||+|.+++.++++++++|+||||...... +.+||||+|.||+| +++|.+|+++|++.|+|+++
T Consensus       395 aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~  471 (472)
T TIGR03250       395 SNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP  471 (472)
T ss_pred             HhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence            99999999999999999999999999999999999876533 46899999999999 56889999999999999875


No 49 
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00  E-value=2.2e-98  Score=801.91  Aligned_cols=461  Identities=27%  Similarity=0.375  Sum_probs=421.3

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-cHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      ++||||+|+.+ ++++++++||.||+++++++.++ +|+++|+++|++| |+.|+.+++.+|+++|++++++|++++++|
T Consensus         2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~l   79 (513)
T cd07128           2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDL   79 (513)
T ss_pred             ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            57999999986 36889999999999999999875 8999999999997 799999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--------cccCCCCCC-ceeEEEEee-ceEEEEECCCCcch
Q 009618          135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG--------EIIPATLPD-RRLFVLKQP-VGVAGAITPWNFPL  204 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g--------~~~~~~~~g-~~~~~~~~P-~GVv~~i~p~n~P~  204 (530)
                      +++ +.|+|||+.+++.|+..+++.++||++.+++..+        ...+...++ ...++.++| +|||++|+|||||+
T Consensus        80 a~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~  158 (513)
T cd07128          80 YAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPV  158 (513)
T ss_pred             HHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHH
Confidence            996 8999999999999999999999999999877642        222221112 135678999 59999999999999


Q ss_pred             HHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHH
Q 009618          205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK  283 (530)
Q Consensus       205 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~  283 (530)
                      .++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++.|   +.+++|+||||+++|+
T Consensus       159 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G~  235 (513)
T cd07128         159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATAA  235 (513)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHHH
Confidence            9999999999999999999999999999999999999999 99999999998654444443   5789999999999999


Q ss_pred             HHHHHH--hcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009618          284 KLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA  356 (530)
Q Consensus       284 ~i~~~~--a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~  356 (530)
                      .|++.+  +++++|+++|||||||+||++|||     +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|+++
T Consensus       236 ~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~  315 (513)
T cd07128         236 KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKAR  315 (513)
T ss_pred             HHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHH
Confidence            999985  478999999999999999999999     9999999999999999999999999999999999999999999


Q ss_pred             hhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceEeceEecCCCCC--Cccc
Q 009618          357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKSE--MLVS  427 (530)
Q Consensus       357 ~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-------~~~~~~~~Ptvl~~~~~~--~~~~  427 (530)
                      ++++++|+|+++++++||++++.+++++.+++++++.+ |++++||...       ..+|+|++|||+.+++++  |.++
T Consensus       316 ~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~  394 (513)
T cd07128         316 LAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVH  394 (513)
T ss_pred             HHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHH
Confidence            99999999999999999999999999999999999988 9999999652       124789999999988874  8999


Q ss_pred             ccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCC---------CCCCCcc
Q 009618          428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI---------STEVAPF  496 (530)
Q Consensus       428 ~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~---------~~~~~pf  496 (530)
                      +||+||||++|++|+|+||+|+++|+++|||++||||+|.+++.+++++|+  +|+||||....         ..+.+||
T Consensus       395 ~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pf  474 (513)
T cd07128         395 DVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVH  474 (513)
T ss_pred             hCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999997  99999998642         2357899


Q ss_pred             cCCCCCCCCCC-ChHHHHHhhheeeEEE
Q 009618          497 GGVKQSGLGRE-GSKYGMDEFLEIKYVC  523 (530)
Q Consensus       497 GG~~~SG~G~~-~g~~~l~~~~~~k~v~  523 (530)
                      ||+|.||+|++ +|.+|+++|++.|+|+
T Consensus       475 GG~k~SG~G~~~gg~~~l~~~~~~k~v~  502 (513)
T cd07128         475 GGPGRAGGGEELGGLRGVKHYMQRTAVQ  502 (513)
T ss_pred             CCcccCCCCcccccHHHHHHhheeeeee
Confidence            99999999999 5799999999999874


No 50 
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00  E-value=5.5e-98  Score=800.56  Aligned_cols=466  Identities=31%  Similarity=0.510  Sum_probs=436.7

Q ss_pred             ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      ...++||+|+|+.+.++++++++||.||+++++++.++.+|++.+++.|++||+.|+.++..+|.++|+++++.|+++++
T Consensus        14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~   93 (496)
T PLN00412         14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA   93 (496)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            34578999999976567899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc--ccCC-----CCCCceeEEEEeeceEEEEECCCCcchH
Q 009618          133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE--IIPA-----TLPDRRLFVLKQPVGVAGAITPWNFPLA  205 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~--~~~~-----~~~g~~~~~~~~P~GVv~~i~p~n~P~~  205 (530)
                      +|++++++|+|||..+++.|+..+++.++|++..+.+..+.  ..+.     ...+...+.+++|+|||++|+|||||+.
T Consensus        94 el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~  173 (496)
T PLN00412         94 PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN  173 (496)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence            99999999999999999999999999999999887765432  2211     1112345788999999999999999999


Q ss_pred             HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHH
Q 009618          206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL  285 (530)
Q Consensus       206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i  285 (530)
                      .+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|++|+.|.|||| .+|+.|
T Consensus       174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v  252 (496)
T PLN00412        174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAI  252 (496)
T ss_pred             HHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHH
Confidence            9999999999999999999999999999999999999999999999999877788999999999999999999 999999


Q ss_pred             HHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618          286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG  365 (530)
Q Consensus       286 ~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p  365 (530)
                      ++.++  .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|
T Consensus       253 ~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  330 (496)
T PLN00412        253 SKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP  330 (496)
T ss_pred             HHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence            98875  7899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618          366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE  445 (530)
Q Consensus       366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~  445 (530)
                      .+ ++++||++++.+++++.+++++++.+|+++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus       331 ~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~d  406 (496)
T PLN00412        331 ED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE  406 (496)
T ss_pred             cc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHH
Confidence            87 789999999999999999999999999999998754   36999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      |||+++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus       407 eai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~  486 (496)
T PLN00412        407 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVI  486 (496)
T ss_pred             HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEE
Confidence            99999999999999999999999999999999999999999764 34579999999999999999999999999999987


Q ss_pred             e
Q 009618          525 G  525 (530)
Q Consensus       525 ~  525 (530)
                      +
T Consensus       487 ~  487 (496)
T PLN00412        487 N  487 (496)
T ss_pred             e
Confidence            5


No 51 
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate.  P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00  E-value=5.5e-98  Score=802.63  Aligned_cols=471  Identities=31%  Similarity=0.505  Sum_probs=443.0

Q ss_pred             CCccccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH
Q 009618           51 GLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA  129 (530)
Q Consensus        51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~  129 (530)
                      .+...+.||+|+|+.+  +.+++++||. ||+++++++.++.+|++.++++|++||+.|+.+|.++|.++|++++++|++
T Consensus        15 ~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~   92 (500)
T cd07083          15 FGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRR   92 (500)
T ss_pred             ccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence            3455678999999974  6789999997 699999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccC-CCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618          130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT  208 (530)
Q Consensus       130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~  208 (530)
                      ++++|++++++|+|||+.++..|+..+++.++||++.+.+..+.... ....+...+++++|+|||++|+|||||+.+.+
T Consensus        93 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~  172 (500)
T cd07083          93 RRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFT  172 (500)
T ss_pred             CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHH
Confidence            99999999999999999999999999999999999999887664321 11245667889999999999999999999999


Q ss_pred             HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618          209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG  288 (530)
Q Consensus       209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~  288 (530)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.|++|++|+||||+.+|+.|++.
T Consensus       173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~  252 (500)
T cd07083         173 GMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA  252 (500)
T ss_pred             HHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             Hhccc------ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc
Q 009618          289 AAGTV------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV  362 (530)
Q Consensus       289 ~a~~~------~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~  362 (530)
                      +++++      +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus       253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  332 (500)
T cd07083         253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSV  332 (500)
T ss_pred             HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCC
Confidence            98876      999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC
Q 009618          363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK  442 (530)
Q Consensus       363 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~  442 (530)
                      |+|.++++++||++++.+++++++++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~  411 (500)
T cd07083         333 GPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYK  411 (500)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeC
Confidence            999999999999999999999999999998887 9999997653347899999999999999999999999999999999


Q ss_pred             --CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHHHHHhhh
Q 009618          443 --TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFL  517 (530)
Q Consensus       443 --~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~  517 (530)
                        |+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.....  +.+||||+|.||+| +++|++++++|+
T Consensus       412 d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~  491 (500)
T cd07083         412 DDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFL  491 (500)
T ss_pred             CCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhh
Confidence              9999999999999999999999999999999999999999999876543  46899999999999 689999999999


Q ss_pred             eeeEEEE
Q 009618          518 EIKYVCL  524 (530)
Q Consensus       518 ~~k~v~~  524 (530)
                      +.|+|+.
T Consensus       492 ~~k~~~~  498 (500)
T cd07083         492 EMKAVAE  498 (500)
T ss_pred             heeEEEE
Confidence            9999875


No 52 
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00  E-value=5.3e-98  Score=796.94  Aligned_cols=456  Identities=40%  Similarity=0.661  Sum_probs=433.5

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      ..++||+|+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~e  100 (480)
T cd07111          21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRL  100 (480)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence            45689999999865578899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618          134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG  212 (530)
Q Consensus       134 la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~  212 (530)
                      |++++++|+|||+.+++ .|+..+++.+++++...+...+           .+..++|+|||++|+|||||+.+.+++++
T Consensus       101 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i~  169 (480)
T cd07111         101 FAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLMLAWKIC  169 (480)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHHHHHHHH
Confidence            99999999999999998 4999999999999877765422           13457999999999999999999999999


Q ss_pred             hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618          213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT  292 (530)
Q Consensus       213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~  292 (530)
                      +||++||+||+|||+.+|+++..++++++++|+|+|++|+|++++ +.+..|+.|++|+.|+||||+.+|+.|++.++++
T Consensus       170 ~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~  248 (480)
T cd07111         170 PALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGT  248 (480)
T ss_pred             HHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999854 6789999999999999999999999999999999


Q ss_pred             cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618          293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ  372 (530)
Q Consensus       293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~  372 (530)
                      +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++
T Consensus       249 ~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~  328 (480)
T cd07111         249 GKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDM  328 (480)
T ss_pred             CCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618          373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN  452 (530)
Q Consensus       373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n  452 (530)
                      ||++++.+++++.+++++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus       329 gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n  408 (480)
T cd07111         329 GAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALAN  408 (480)
T ss_pred             ccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHh
Confidence            99999999999999999999999999999865333579999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeE
Q 009618          453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY  521 (530)
Q Consensus       453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~  521 (530)
                      +++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+
T Consensus       409 ~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         409 NTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             CCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence            999999999999999999999999999999999987777789999999999999999999999999985


No 53 
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00  E-value=6.3e-98  Score=792.69  Aligned_cols=449  Identities=39%  Similarity=0.604  Sum_probs=428.4

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      ++||.||+++++++.++.+|++.|++.|++||+.  |+. ++.+|.++|++++++|++++++|++++++|+|||..+++.
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~   79 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF   79 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            4799999999999999999999999999999985  998 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL  231 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  231 (530)
                      |+..+++.++||++.++...+...+. .++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~  158 (455)
T cd07120          80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ  158 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence            99999999999999988876654432 23567789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-cCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618          232 TALAAAELALQ-AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD  310 (530)
Q Consensus       232 ~~~~l~~~l~~-aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~  310 (530)
                      ++..+++++++ +|+|+|++|++++++.++++.|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+||++
T Consensus       159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~  238 (455)
T cd07120         159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD  238 (455)
T ss_pred             HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence            99999999999 79999999999987778899999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHH
Q 009618          311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED  390 (530)
Q Consensus       311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~  390 (530)
                      |||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++
T Consensus       239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~  318 (455)
T cd07120         239 DADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER  318 (455)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618          391 AVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL  467 (530)
Q Consensus       391 a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~  467 (530)
                      ++++|+++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus       319 a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~  398 (455)
T cd07120         319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDL  398 (455)
T ss_pred             HHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence            9999999999876532   2478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       468 ~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|++
T Consensus       399 ~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~  455 (455)
T cd07120         399 ARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL  455 (455)
T ss_pred             HHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence            999999999999999999988777789999999999999999999999999999864


No 54 
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00  E-value=1.3e-97  Score=793.77  Aligned_cols=450  Identities=45%  Similarity=0.710  Sum_probs=429.2

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV  153 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev  153 (530)
                      ++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev   80 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV   80 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhC---cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcH
Q 009618          154 DYGAKFIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP  230 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g---~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~  230 (530)
                      ..+++.++||++.++++.+   ...+...++...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p  160 (456)
T cd07110          81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS  160 (456)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence            9999999999998877642   2222222356678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618          231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD  310 (530)
Q Consensus       231 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~  310 (530)
                      +++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus       161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~  240 (456)
T cd07110         161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD  240 (456)
T ss_pred             HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence            99999999999999999999999997777899999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHH
Q 009618          311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED  390 (530)
Q Consensus       311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~  390 (530)
                      |||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++
T Consensus       241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~  320 (456)
T cd07110         241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIAR  320 (456)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618          391 AVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ  468 (530)
Q Consensus       391 a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~  468 (530)
                      ++.+|+++++||....  ..++|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus       321 a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~  400 (456)
T cd07110         321 GKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAE  400 (456)
T ss_pred             HHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence            9999999999997643  34789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      ++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       401 ~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         401 RCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             HHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence            9999999999999999997767778999999999999999999999999999985


No 55 
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00  E-value=1.5e-97  Score=792.66  Aligned_cols=450  Identities=36%  Similarity=0.608  Sum_probs=429.1

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV  153 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev  153 (530)
                      ++||.||+++++++.++.+|++.+++.|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev   80 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV   80 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618          154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA  233 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~  233 (530)
                      ..+++.++|++.....+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus        81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~  159 (456)
T cd07107          81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA  159 (456)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence            9999999999988877766554433 255678999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618          234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD  313 (530)
Q Consensus       234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD  313 (530)
                      ..+++++.++ +|+|++|++++++.+.++.|+.|+++++|+||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus       160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dad  238 (456)
T cd07107         160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD  238 (456)
T ss_pred             HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCC
Confidence            9999999995 999999999987777889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH-hhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          314 LNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       314 ~~~a~~~i~~s~-f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      +|.|++.+++++ |.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++++++
T Consensus       239 l~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~  318 (456)
T cd07107         239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAK  318 (456)
T ss_pred             HHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHH
Confidence            999999999995 9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618          393 SKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ  468 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~  468 (530)
                      .+|+++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       319 ~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~  398 (456)
T cd07107         319 REGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS  398 (456)
T ss_pred             HCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHH
Confidence            99999999997532    24789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus       399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~  455 (456)
T cd07107         399 QAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR  455 (456)
T ss_pred             HHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            999999999999999999887777899999999999999999999999999999874


No 56 
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans,  D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent,  L-sorbosone dehydrogenase.
Probab=100.00  E-value=1.5e-97  Score=791.37  Aligned_cols=450  Identities=42%  Similarity=0.685  Sum_probs=429.9

Q ss_pred             ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618           75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE  152 (530)
Q Consensus        75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E  152 (530)
                      +||+||+++++++.++.+|++.+++.|++||+.  |+.+|.++|.++|++++++|++++++|++++++|+|||+.+++.|
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e   81 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE   81 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            689999999999999999999999999999985  999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618          153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT  232 (530)
Q Consensus       153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~  232 (530)
                      +..+++.++|++...+++.+...+...++...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus        82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~  161 (454)
T cd07118          82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT  161 (454)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence            99999999999998777765544332234566889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      +..+++++.++|+|+|++|++++++.++++.|+.|++|+.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus       162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA  241 (454)
T cd07118         162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA  241 (454)
T ss_pred             HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence            99999999999999999999998777789999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|+++++++||++++.+.+++.+++++++
T Consensus       242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  321 (454)
T cd07118         242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR  321 (454)
T ss_pred             CHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618          393 SKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW  471 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~  471 (530)
                      .+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus       322 ~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~  401 (454)
T cd07118         322 AEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTAL  401 (454)
T ss_pred             hCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHH
Confidence            99999999998753 35789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       472 ~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++++++++|+|+||+....++.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus       402 ~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~~  454 (454)
T cd07118         402 TVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVHL  454 (454)
T ss_pred             HHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence            99999999999999988878889999999999999999999999999999863


No 57 
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00  E-value=2e-97  Score=792.23  Aligned_cols=451  Identities=47%  Similarity=0.743  Sum_probs=428.5

Q ss_pred             EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      ++++||.||+++++++.++.+|++.+++.|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   80 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV   80 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE  227 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~  227 (530)
                      |+..+++.++|+++.+..+.+...+...    .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus        81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~  160 (456)
T cd07145          81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS  160 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence            9999999999999888766655433221    134567889999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618          228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI  307 (530)
Q Consensus       228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i  307 (530)
                      .+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++++.|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i  240 (456)
T cd07145         161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI  240 (456)
T ss_pred             cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence            99999999999999999999999999997778899999999999999999999999999999999999999999999999


Q ss_pred             EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618          308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF  387 (530)
Q Consensus       308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~  387 (530)
                      |++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++++++
T Consensus       241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~  320 (456)
T cd07145         241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL  320 (456)
T ss_pred             ECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618          388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL  467 (530)
Q Consensus       388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~  467 (530)
                      +++++.+|+++++||...  .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus       321 i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~  398 (456)
T cd07145         321 VNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDI  398 (456)
T ss_pred             HHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence            999999999999999764  278999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          468 QRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       468 ~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++.++++++++|+||||+..... +.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       399 ~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~  456 (456)
T cd07145         399 NRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI  456 (456)
T ss_pred             HHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence            999999999999999999876543 579999999999999999999999999999864


No 58 
>PF00171 Aldedh:  Aldehyde dehydrogenase family;  InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation.  The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00  E-value=3.6e-98  Score=799.20  Aligned_cols=458  Identities=47%  Similarity=0.776  Sum_probs=434.4

Q ss_pred             eeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 009618           63 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ  142 (530)
Q Consensus        63 ~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~  142 (530)
                      |+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus         1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~   79 (462)
T PF00171_consen    1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET   79 (462)
T ss_dssp             EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence            787754 7899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEE
Q 009618          143 GKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV  222 (530)
Q Consensus       143 Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV  222 (530)
                      |||+.+++.|+..+++.++||++.++++.+...+. ..+...+..++|+|||++|+|||||+.++++++++||++||+||
T Consensus        80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV  158 (462)
T PF00171_consen   80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV  158 (462)
T ss_dssp             TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred             ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence            99999999999999999999999999977766555 36888999999999999999999999999999999999999999


Q ss_pred             eecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCC
Q 009618          223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG  302 (530)
Q Consensus       223 lKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG  302 (530)
                      +|||+.+|.++..++++++++|+|+|++|++++++.+.+..|+.||+++.|.||||+++|+.|++.++++++|+++|+||
T Consensus       159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG  238 (462)
T PF00171_consen  159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGG  238 (462)
T ss_dssp             EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECE
T ss_pred             eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccc
Confidence            99999999999999999999999999999999988899999999999999999999999999999999999999999999


Q ss_pred             CccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHH
Q 009618          303 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE  382 (530)
Q Consensus       303 ~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~  382 (530)
                      |||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+.+
T Consensus       239 ~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~  318 (462)
T PF00171_consen  239 KNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRE  318 (462)
T ss_dssp             EEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHH
T ss_pred             cceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCeEeeCCc---ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcE
Q 009618          383 KVETFVEDAVSKGAKVLLGGR---RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA  459 (530)
Q Consensus       383 ~~~~~i~~a~~~Ga~vl~gg~---~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~  459 (530)
                      ++++++++++.+||++++||.   .....|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+
T Consensus       319 ~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~  398 (462)
T PF00171_consen  319 RVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLT  398 (462)
T ss_dssp             HHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESE
T ss_pred             hcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCce
Confidence            999999999999999999993   22245799999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCHHHHHHHHhhccceEEEECCCCCCCCC-CcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          460 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       460 a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~-~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                      ++|||+|.++++++++++++|+||||++...++. +||||+|.||+|+++|.+||++|++.|+|
T Consensus       399 a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  399 ASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             EEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             eEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence            9999999999999999999999999999876655 59999999999999999999999999987


No 59 
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00  E-value=6.4e-97  Score=791.99  Aligned_cols=465  Identities=32%  Similarity=0.500  Sum_probs=432.8

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ  136 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~  136 (530)
                      .||+|+|+.+ ++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++
T Consensus         1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   79 (484)
T TIGR03240         1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR   79 (484)
T ss_pred             CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            4899999875 468899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618          137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA  216 (530)
Q Consensus       137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa  216 (530)
                      ++++|+|||..+++.|+..+++.++|++.......+...+. .++...++.++|+|||++|+|||||+...++++++||+
T Consensus        80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa  158 (484)
T TIGR03240        80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL  158 (484)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999888877665544322 23445688899999999999999999999999999999


Q ss_pred             cCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc-cce
Q 009618          217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK  295 (530)
Q Consensus       217 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~-~~~  295 (530)
                      +||+||+|||+.+|+++..++++++++|+|+|++|+|++ +.+.++.|+.||+|++|+||||+++|+.|++.++++ .++
T Consensus       159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~  237 (484)
T TIGR03240       159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKI  237 (484)
T ss_pred             cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCc
Confidence            999999999999999999999999999999999999998 567899999999999999999999999999987765 688


Q ss_pred             EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhccccCCC-CCCCcccC
Q 009618          296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDG-FGEGVVQG  373 (530)
Q Consensus       296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p-~~~~~~~G  373 (530)
                      +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|+| .++++++|
T Consensus       238 ~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~g  317 (484)
T TIGR03240       238 LALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMG  317 (484)
T ss_pred             EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCccc
Confidence            999999999999999999999999999999999999999999999999985 9999999999999999997 57889999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc
Q 009618          374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND  453 (530)
Q Consensus       374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~  453 (530)
                      |++++.+++++.+++++++++|+++++||...+.+++|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+
T Consensus       318 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~  396 (484)
T TIGR03240       318 AVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANN  396 (484)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence            99999999999999999999999999988654345689999999 58899999999999999999999999999999999


Q ss_pred             CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       454 ~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      ++|||+++|||+|.++++++++++++|+||||..... .+.+||||+|.||+|+++|.++++ |++.|+++++.
T Consensus       397 ~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~  469 (484)
T TIGR03240       397 TRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA  469 (484)
T ss_pred             CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence            9999999999999999999999999999999987653 457899999999999999976655 99999998873


No 60 
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related  sequences are included in this CD.  The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+  and exhibited a broad substrate preference, including vanillin,  benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00  E-value=3.1e-97  Score=790.46  Aligned_cols=450  Identities=43%  Similarity=0.715  Sum_probs=431.5

Q ss_pred             EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      ++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   80 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF   80 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL  231 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  231 (530)
                      |+..+++.+++++..+++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~  160 (451)
T cd07150          81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV  160 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence            99999999999999988876665554435667889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618          232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD  311 (530)
Q Consensus       232 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d  311 (530)
                      ++..+++++.++|+|+|++|++++++.+.++.|+.|++|++|.||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus       161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d  240 (451)
T cd07150         161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD  240 (451)
T ss_pred             HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence            99999999999999999999999877788999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618          312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA  391 (530)
Q Consensus       312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a  391 (530)
                      ||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus       241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a  320 (451)
T cd07150         241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA  320 (451)
T ss_pred             CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618          392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW  471 (530)
Q Consensus       392 ~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~  471 (530)
                      +.+|+++++||...   |+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus       321 ~~~Ga~vl~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~  397 (451)
T cd07150         321 VAKGAKLLTGGKYD---GNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAF  397 (451)
T ss_pred             HhCCCEEEeCCccC---CcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHH
Confidence            99999999998653   689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          472 RVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       472 ~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++++++++|+|+||++.... +.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus       398 ~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~  451 (451)
T cd07150         398 KLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV  451 (451)
T ss_pred             HHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence            99999999999999987644 578999999999999999999999999999864


No 61 
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00  E-value=3.7e-97  Score=788.53  Aligned_cols=448  Identities=35%  Similarity=0.519  Sum_probs=423.7

Q ss_pred             EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        73 ~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      +++||.||+++++++.++.+|++.++++|++||+. |+.++.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus         2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   81 (455)
T cd07148           2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV   81 (455)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            47899999999999999999999999999999998 56799999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE  227 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~  227 (530)
                      |+..+++.++|++..++++.+...+..    .++...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~  161 (455)
T cd07148          82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL  161 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence            999999999999999888766543321    1345678899999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618          228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI  307 (530)
Q Consensus       228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i  307 (530)
                      .+|+++..+++++.++|+|+|++|+++++ .+.++.|+.|++|+.|+||||+++|+.|++.++. .+|+++|+|||||+|
T Consensus       162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~i  239 (455)
T cd07148         162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVI  239 (455)
T ss_pred             cccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceE
Confidence            99999999999999999999999999984 4678999999999999999999999999998876 489999999999999


Q ss_pred             EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618          308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF  387 (530)
Q Consensus       308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~  387 (530)
                      |++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++++++
T Consensus       240 V~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~  319 (455)
T cd07148         240 VDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEW  319 (455)
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618          388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL  467 (530)
Q Consensus       388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~  467 (530)
                      +++++.+|+++++||...  +++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus       320 i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~  397 (455)
T cd07148         320 VNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL  397 (455)
T ss_pred             HHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence            999999999999999764  368999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          468 QRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       468 ~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++.++++++++|+||||++.... +.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus       398 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~  455 (455)
T cd07148         398 DVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI  455 (455)
T ss_pred             HHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence            999999999999999999876543 468999999999999999999999999999864


No 62 
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=5.8e-97  Score=797.67  Aligned_cols=467  Identities=40%  Similarity=0.614  Sum_probs=438.9

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      .+++|.|.|-.  ++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|
T Consensus        19 ~~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el   96 (524)
T PRK09407         19 LRRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL   96 (524)
T ss_pred             HHHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            35678888755  5889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccC-CCCC-CceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618          135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVG  212 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~-g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~  212 (530)
                      ++++++|+|||..++..|+..++..++||+..+.+..+.... ...+ ....+..++|+|||++|+|||||+...+++++
T Consensus        97 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~  176 (524)
T PRK09407         97 LDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAI  176 (524)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHH
Confidence            999999999999999999999999999999988876654321 1111 25678899999999999999999999999999


Q ss_pred             hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618          213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT  292 (530)
Q Consensus       213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~  292 (530)
                      +||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|  ++.|+||||+.+|+.|++.++++
T Consensus       177 ~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~  254 (524)
T PRK09407        177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR  254 (524)
T ss_pred             HHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999777889999986  68899999999999999999999


Q ss_pred             cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618          293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ  372 (530)
Q Consensus       293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~  372 (530)
                      ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++
T Consensus       255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~  334 (524)
T PRK09407        255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADM  334 (524)
T ss_pred             CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      ||++++++++++++++++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++
T Consensus       335 Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~  414 (524)
T PRK09407        335 GSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERA  414 (524)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHH
Confidence            9999999999999999999999999999997532 357899999999999999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC---CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~---~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+++|||++||||+|.+++.++++++++|+||||+...   .++.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       415 N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  491 (524)
T PRK09407        415 NDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQ  491 (524)
T ss_pred             hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEc
Confidence            99999999999999999999999999999999998654   345689999999999999999999999999999876


No 63 
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00  E-value=6.5e-97  Score=811.66  Aligned_cols=462  Identities=25%  Similarity=0.358  Sum_probs=422.6

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-cHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      ++||||+|+.+. +++++++||.||+++++++.++ +|+++|+++|++| |+.|+.++..+|+++|++++++|++++++|
T Consensus         2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el   79 (663)
T TIGR02278         2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL   79 (663)
T ss_pred             ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            469999999863 6789999999999999999999 6999999999996 999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--------CcccCCCCCC-ceeEEEEeec-eEEEEECCCCcch
Q 009618          135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNFPL  204 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--------g~~~~~~~~g-~~~~~~~~P~-GVv~~i~p~n~P~  204 (530)
                      ++ +++|+|||+.+++.|+..+++.++||+..+++..        |...+...++ ...++.++|+ |||++|+|||||+
T Consensus        80 a~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~  158 (663)
T TIGR02278        80 YA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPV  158 (663)
T ss_pred             HH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHH
Confidence            99 5999999999999999999999999999887632        3333322222 3468899997 9999999999999


Q ss_pred             HHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHH
Q 009618          205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK  283 (530)
Q Consensus       205 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~  283 (530)
                      .++++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+|+|+..+   .+..+++++.|+||||+++|+
T Consensus       159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~~---~~~~~~~~~~V~FTGS~~~G~  235 (663)
T TIGR02278       159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGD---LLDHLDHRDVVAFTGSAATAD  235 (663)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChHH---HHhcCCCCCEEEEECCHHHHH
Confidence            9999999999999999999999999999999999999999 999999999985322   333346789999999999999


Q ss_pred             HHHHHH--hcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009618          284 KLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA  356 (530)
Q Consensus       284 ~i~~~~--a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~  356 (530)
                      .|++.+  +++++|+++|||||||+||++|||     +|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++
T Consensus       236 ~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~  315 (663)
T TIGR02278       236 RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQAR  315 (663)
T ss_pred             HHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHH
Confidence            999874  478999999999999999999999     9999999999999999999999999999999999999999999


Q ss_pred             hhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCC-cccccccccce
Q 009618          357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEVFGPV  435 (530)
Q Consensus       357 ~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~-~~~~eE~FGPv  435 (530)
                      ++++++|+|+++++++||++++.+++++++++++++++|+++++||... .+|+|++|||+.+++++| .+++||+||||
T Consensus       316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~FGPV  394 (663)
T TIGR02278       316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAFGPV  394 (663)
T ss_pred             HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhccccCCe
Confidence            9999999999999999999999999999999999999999999999764 347999999999998886 79999999999


Q ss_pred             EEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEE-CCC-------C-CCCCCCcccCCCCCCC
Q 009618          436 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGV-NEG-------L-ISTEVAPFGGVKQSGL  504 (530)
Q Consensus       436 ~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~v~v-N~~-------~-~~~~~~pfGG~~~SG~  504 (530)
                      ++|++|+|.||||+++|+++|||++||||+|.+++.+++++|  ++|+||| |..       . ...+.+||||+|.||+
T Consensus       395 l~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~  474 (663)
T TIGR02278       395 ATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGG  474 (663)
T ss_pred             EEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcC
Confidence            999999999999999999999999999999999999999999  8999999 642       1 1235789999999999


Q ss_pred             CCC-ChHHHHHhhheeeEEEE
Q 009618          505 GRE-GSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       505 G~~-~g~~~l~~~~~~k~v~~  524 (530)
                      |++ +|.+++++|++.|+|+.
T Consensus       475 G~~~g~~~~l~~f~~~k~v~~  495 (663)
T TIGR02278       475 GEELGGLRSVKHYMQRTAIQG  495 (663)
T ss_pred             CCccchHHHHHHhceeEEEEc
Confidence            999 57899999999999865


No 64 
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis  and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00  E-value=1e-96  Score=786.99  Aligned_cols=450  Identities=44%  Similarity=0.703  Sum_probs=430.0

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV  153 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev  153 (530)
                      ++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev   80 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI   80 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618          154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA  233 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~  233 (530)
                      ..+++.++||++.++.+.+...+.. .+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~  159 (457)
T cd07090          81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence            9999999999998877665544332 256778999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618          234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD  313 (530)
Q Consensus       234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD  313 (530)
                      ..+.+++.++|+|+|++|+++++ .+.++.|+.|++|+.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus       160 ~~l~~~~~~aGlP~g~~~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAd  238 (457)
T cd07090         160 LLLAEILTEAGLPDGVFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDAD  238 (457)
T ss_pred             HHHHHHHHHcCCCcccEEEEeCC-hhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCC
Confidence            99999999999999999999985 46889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618          314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS  393 (530)
Q Consensus       314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~  393 (530)
                      +|.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||+++..+++++.+++++++.
T Consensus       239 l~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  318 (457)
T cd07090         239 LENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQ  318 (457)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEeeCCcccC-----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618          394 KGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ  468 (530)
Q Consensus       394 ~Ga~vl~gg~~~~-----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~  468 (530)
                      +|+++++||....     .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus       319 ~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~  398 (457)
T cd07090         319 EGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ  398 (457)
T ss_pred             CCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHH
Confidence            9999999997532     24789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +++++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus       399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~  455 (457)
T cd07090         399 RAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE  455 (457)
T ss_pred             HHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence            999999999999999999877777899999999999999999999999999999874


No 65 
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00  E-value=1.1e-96  Score=785.69  Aligned_cols=451  Identities=41%  Similarity=0.645  Sum_probs=429.0

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-G  151 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~  151 (530)
                      ++||.||+++++++.++.+|+++++++|++|++.|+ .++..+|.++|++++++|++++++|++++++|+|||+.++. .
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   80 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM   80 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence            479999999999999999999999999999999999 99999999999999999999999999999999999998775 5


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCccc-CCC---CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEII-PAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE  227 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~-~~~---~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~  227 (530)
                      |+..+++.++||++.+.+..+... +..   ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~  160 (459)
T cd07089          81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP  160 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999999887665542 221   1355678999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618          228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI  307 (530)
Q Consensus       228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i  307 (530)
                      .+|.++..+.+++.++|+|+|++|++++++.+++..|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i  240 (459)
T cd07089         161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI  240 (459)
T ss_pred             CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence            99999999999999999999999999997777899999999999999999999999999999999999999999999999


Q ss_pred             EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618          308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF  387 (530)
Q Consensus       308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~  387 (530)
                      |++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+.++++++
T Consensus       241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~  320 (459)
T cd07089         241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY  320 (459)
T ss_pred             ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009618          388 VEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN  465 (530)
Q Consensus       388 i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~  465 (530)
                      +++++.+|+++++||....  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus       321 i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~  400 (459)
T cd07089         321 IARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSA  400 (459)
T ss_pred             HHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcC
Confidence            9999999999999997643  25789999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       466 d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      |.++++++++++++|+|+||+....++.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       401 d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~  459 (459)
T cd07089         401 DVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY  459 (459)
T ss_pred             CHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence            99999999999999999999988777889999999999999999999999999999864


No 66 
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00  E-value=1.4e-96  Score=785.20  Aligned_cols=449  Identities=41%  Similarity=0.660  Sum_probs=427.6

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE  152 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E  152 (530)
                      ++||+||+++++++.++.+|++.++++|++|++.|. .++.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e   80 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD   80 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence            479999999999999999999999999999999876 9999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618          153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT  232 (530)
Q Consensus       153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~  232 (530)
                      +..+++.++||++..++..+...+.. ++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus        81 v~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~  159 (454)
T cd07109          81 VEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT  159 (454)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence            99999999999998877766554432 35678899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      +..+++++.++|+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus       160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da  239 (454)
T cd07109         160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA  239 (454)
T ss_pred             HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence            99999999999999999999998777889999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++++.+++.+++++++
T Consensus       240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~  318 (454)
T cd07109         240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARAR  318 (454)
T ss_pred             CHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999986 689999999999999999999999


Q ss_pred             HCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009618          393 SKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR  469 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~  469 (530)
                      .+|+++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++
T Consensus       319 ~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~  398 (454)
T cd07109         319 ARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDR  398 (454)
T ss_pred             hCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHH
Confidence            99999999987542   257899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccceEEEECCCC-CCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          470 TWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       470 ~~~~a~~l~~G~v~vN~~~-~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +.++++++++|+|+||+.. ..++.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       399 ~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~~  454 (454)
T cd07109         399 ALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV  454 (454)
T ss_pred             HHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEeC
Confidence            9999999999999999987 456679999999999999999999999999999863


No 67 
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00  E-value=2.4e-96  Score=783.25  Aligned_cols=450  Identities=44%  Similarity=0.727  Sum_probs=430.5

Q ss_pred             ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHH
Q 009618           75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV  153 (530)
Q Consensus        75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev  153 (530)
                      +||.||+++++++.++.++++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev   81 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV   81 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            6999999999999999999999999999999999999999999999999999999999999999999999999997 499


Q ss_pred             HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618          154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA  233 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~  233 (530)
                      ..+++.++|++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus        82 ~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~  160 (453)
T cd07115          82 PRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA  160 (453)
T ss_pred             HHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence            9999999999998877766544432 356678999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618          234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD  313 (530)
Q Consensus       234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD  313 (530)
                      ..+.+++.++|+|+|+++++++++.++++.|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus       161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd  240 (453)
T cd07115         161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD  240 (453)
T ss_pred             HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence            99999999999999999999997778889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618          314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS  393 (530)
Q Consensus       314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~  393 (530)
                      ++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++++
T Consensus       241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  320 (453)
T cd07115         241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE  320 (453)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618          394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV  473 (530)
Q Consensus       394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~  473 (530)
                      +|+++++||......++|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++
T Consensus       321 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~  400 (453)
T cd07115         321 EGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV  400 (453)
T ss_pred             CCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHH
Confidence            99999999976433478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus       401 ~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~  452 (453)
T cd07115         401 AAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN  452 (453)
T ss_pred             HHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            9999999999998777778899999999999999999999999999999774


No 68 
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of  Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00  E-value=2.6e-96  Score=783.45  Aligned_cols=454  Identities=42%  Similarity=0.695  Sum_probs=431.7

Q ss_pred             CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009618           70 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK  147 (530)
Q Consensus        70 ~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~  147 (530)
                      ++++++||.||+++++++.++.+|++.+++.|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   81 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS   81 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence            4688999999999999999999999999999999998  49999999999999999999999999999999999999999


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecC
Q 009618          148 EAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS  226 (530)
Q Consensus       148 ~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps  226 (530)
                      +++. |+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus        82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps  160 (462)
T cd07112          82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTG-PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA  160 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence            9975 999999999999999887766543322 34567889999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh-cccceEEeecCCCcc
Q 009618          227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVKKVSLELGGNAP  305 (530)
Q Consensus       227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-~~~~~~~lelgG~~~  305 (530)
                      +.+|+++..+++++.++|+|+|++|+|++++.+.+..|+.|++++.|.||||+++|+.|++.++ .++||+++|+||+||
T Consensus       161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~  240 (462)
T cd07112         161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP  240 (462)
T ss_pred             CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence            9999999999999999999999999999977788999999999999999999999999999988 489999999999999


Q ss_pred             EEEecCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHH
Q 009618          306 CIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV  384 (530)
Q Consensus       306 ~iV~~dA-D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~  384 (530)
                      +||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++
T Consensus       241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v  320 (462)
T cd07112         241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKV  320 (462)
T ss_pred             EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence            9999999 999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEE
Q 009618          385 ETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI  462 (530)
Q Consensus       385 ~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v  462 (530)
                      .+++++++++|+++++||....  .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|
T Consensus       321 ~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i  400 (462)
T cd07112         321 LGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASV  400 (462)
T ss_pred             HHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEE
Confidence            9999999999999999997642  24789999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          463 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       463 ~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       401 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~~  462 (462)
T cd07112         401 WTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTWI  462 (462)
T ss_pred             EcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEEC
Confidence            99999999999999999999999987777789999999999999999999999999999863


No 69 
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate.  SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00  E-value=3.3e-96  Score=782.00  Aligned_cols=448  Identities=39%  Similarity=0.622  Sum_probs=423.0

Q ss_pred             ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Q 009618           75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD  154 (530)
Q Consensus        75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~  154 (530)
                      .||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++..|+.
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~   80 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL   80 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence            38999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccc-CCCCC-CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618          155 YGAKFIEFYAEEAKRVYGEII-PATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT  232 (530)
Q Consensus       155 ~~~~~l~~~a~~~~~~~g~~~-~~~~~-g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~  232 (530)
                      .+++.++|++..+.+..+... +...+ ....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~  160 (454)
T cd07101          81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT  160 (454)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence            999999999998877654432 11111 3467889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      +..+.+++.++|+|+|++|++++++.+.+..|++|  ++.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus       161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dA  238 (454)
T cd07101         161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA  238 (454)
T ss_pred             HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCC
Confidence            99999999999999999999999878889999987  4789999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++++++
T Consensus       239 dl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~  318 (454)
T cd07101         239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAV  318 (454)
T ss_pred             CHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618          393 SKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW  471 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~  471 (530)
                      ++|+++++||.... .+++|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.
T Consensus       319 ~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~  398 (454)
T cd07101         319 AKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGR  398 (454)
T ss_pred             HCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence            99999999986532 34689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceEEEECCCCC---CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          472 RVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       472 ~~a~~l~~G~v~vN~~~~---~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++++++++|+||||++..   ..+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       399 ~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~  454 (454)
T cd07101         399 RIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV  454 (454)
T ss_pred             HHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence            999999999999998654   34678999999999999999999999999999864


No 70 
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00  E-value=5.9e-96  Score=789.48  Aligned_cols=467  Identities=32%  Similarity=0.445  Sum_probs=437.7

Q ss_pred             ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618           53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK  131 (530)
Q Consensus        53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~  131 (530)
                      ....+||+|+|..  ++++++++||.| |+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++
T Consensus        31 ~~~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~  108 (518)
T cd07125          31 WEAIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANR  108 (518)
T ss_pred             cccCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            3456899999984  588999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618          132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~-~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  210 (530)
                      ++|++++++|+|||+.+++.|+..+++.++|+++.+++..+.. .+.. .+...+.+++|+|||++|+|||||+...+++
T Consensus       109 ~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  187 (518)
T cd07125         109 GELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGP-TGELNGLELHGRGVFVCISPWNFPLAIFTGQ  187 (518)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CCceeEEEEecccEEEEECCcchHHHHHHHH
Confidence            9999999999999999999999999999999999888766543 2222 2566789999999999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.|++|+.|+||||+++|+.|++.++
T Consensus       188 i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa  267 (518)
T cd07125         188 IAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALA  267 (518)
T ss_pred             HHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999876678899999999999999999999999999888


Q ss_pred             cc---cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618          291 GT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG  367 (530)
Q Consensus       291 ~~---~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~  367 (530)
                      ++   ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++
T Consensus       268 ~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~  347 (518)
T cd07125         268 ERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWD  347 (518)
T ss_pred             hccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCC
Confidence            54   899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC--CHH
Q 009618          368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE  445 (530)
Q Consensus       368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~~  445 (530)
                      +++++||++++.+++++.+++++++. ++++++||.....+|+|++|||+.++  +|.+++||+||||++|++|+  |+|
T Consensus       348 ~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~d  424 (518)
T cd07125         348 LSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLD  424 (518)
T ss_pred             CCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHH
Confidence            99999999999999999999999987 57899998754225799999999887  89999999999999999999  999


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCCC-CChHHHHHhhheeeEE
Q 009618          446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYV  522 (530)
Q Consensus       446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v  522 (530)
                      |||+++|+++|||++||||+|.++++++++++++|+||||+....  .+.+||||+|.||+|+ ++|++++++|++.|+|
T Consensus       425 eAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i  504 (518)
T cd07125         425 EAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTV  504 (518)
T ss_pred             HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEE
Confidence            999999999999999999999999999999999999999987653  3568999999999995 6899999999999999


Q ss_pred             EEe
Q 009618          523 CLG  525 (530)
Q Consensus       523 ~~~  525 (530)
                      +++
T Consensus       505 ~~~  507 (518)
T cd07125         505 SLN  507 (518)
T ss_pred             EEE
Confidence            875


No 71 
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00  E-value=3.5e-96  Score=780.61  Aligned_cols=445  Identities=43%  Similarity=0.650  Sum_probs=423.7

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV  153 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev  153 (530)
                      ++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++.|+
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev   80 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV   80 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618          154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA  233 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~  233 (530)
                      ..+++.++++++...  .+...+. .++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus        81 ~~~~~~l~~~~~~~~--~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~  157 (446)
T cd07106          81 GGAVAWLRYTASLDL--PDEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT  157 (446)
T ss_pred             HHHHHHHHHHHhhhh--cCccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence            999999999987762  2222222 2356778999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618          234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD  313 (530)
Q Consensus       234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD  313 (530)
                      ..+++++.++ +|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus       158 ~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dAD  235 (446)
T cd07106         158 LKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVD  235 (446)
T ss_pred             HHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCC
Confidence            9999999996 99999999998 456889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618          314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS  393 (530)
Q Consensus       314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~  393 (530)
                      +|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++..
T Consensus       236 l~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~  315 (446)
T cd07106         236 IDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKA  315 (446)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618          394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV  473 (530)
Q Consensus       394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~  473 (530)
                      +|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus       316 ~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~  395 (446)
T cd07106         316 KGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAV  395 (446)
T ss_pred             CCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence            99999999976533478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      ++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus       396 ~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         396 ARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             HHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence            99999999999998877788999999999999999999999999999986


No 72 
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00  E-value=2.2e-96  Score=778.56  Aligned_cols=431  Identities=28%  Similarity=0.416  Sum_probs=403.0

Q ss_pred             CCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHH
Q 009618           89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEA  167 (530)
Q Consensus        89 ~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~  167 (530)
                      ....|++.++++|++||+.|+.++..+|.++|++++++|++|+++|++++++|+|||..++.. |+..+++.++|+++.+
T Consensus         7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~   86 (484)
T PLN02174          7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL   86 (484)
T ss_pred             cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999999999999999999975 9999999999999988


Q ss_pred             HHHhCccc---CCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC
Q 009618          168 KRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG  244 (530)
Q Consensus       168 ~~~~g~~~---~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG  244 (530)
                      ++..+...   +....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+ +
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~  165 (484)
T PLN02174         87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y  165 (484)
T ss_pred             HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence            87765211   1112234578999999999999999999999999999999999999999999999999999999999 6


Q ss_pred             CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHH
Q 009618          245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA  324 (530)
Q Consensus       245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s  324 (530)
                      +|+|++|+|+| +.+.+..|+. ++|++|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.++++
T Consensus       166 lp~gvv~vv~G-~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g  243 (484)
T PLN02174        166 LDSSAVRVVEG-AVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAG  243 (484)
T ss_pred             CCCCEEEEEEC-ChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            99999999998 4455677876 899999999999999999999999999999999999999999999999999999999


Q ss_pred             Hh-hccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 009618          325 KF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR  403 (530)
Q Consensus       325 ~f-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~  403 (530)
                      +| .|+||.|++++|+|||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||.
T Consensus       244 ~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~  321 (484)
T PLN02174        244 KWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGE  321 (484)
T ss_pred             HhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCC
Confidence            99 59999999999999999999999999999999999999988 89999999999999999999997 78999999997


Q ss_pred             ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEE
Q 009618          404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG  483 (530)
Q Consensus       404 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~  483 (530)
                      .. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+||
T Consensus       322 ~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~  400 (484)
T PLN02174        322 KD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV  400 (484)
T ss_pred             cC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEE
Confidence            53 35789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ECCCCCCC--CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          484 VNEGLIST--EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       484 vN~~~~~~--~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ||++....  +.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       401 IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  444 (484)
T PLN02174        401 VNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR  444 (484)
T ss_pred             ECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence            99876543  6789999999999999999999999999999876


No 73 
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00  E-value=3.6e-96  Score=782.33  Aligned_cols=447  Identities=44%  Similarity=0.710  Sum_probs=426.4

Q ss_pred             EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618           73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE  152 (530)
Q Consensus        73 ~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E  152 (530)
                      +++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus         2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e   81 (453)
T cd07094           2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARVE   81 (453)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCC
Q 009618          153 VDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF  228 (530)
Q Consensus       153 v~~~~~~l~~~a~~~~~~~g~~~~~~~----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~  228 (530)
                      +..+++.++|+++.+.+..+...+...    .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        82 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~  161 (453)
T cd07094          82 VDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK  161 (453)
T ss_pred             HHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            999999999999998887665443322    2456778899999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEE
Q 009618          229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV  308 (530)
Q Consensus       229 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV  308 (530)
                      +|+++..+++++.++|+|+|+++++++++.++++.|+.|++++.|+||||+++|+.|++.+  .++|+++|+|||||+||
T Consensus       162 ~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV  239 (453)
T cd07094         162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIV  239 (453)
T ss_pred             chHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEE
Confidence            9999999999999999999999999997778899999999999999999999999999887  58999999999999999


Q ss_pred             ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618          309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV  388 (530)
Q Consensus       309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i  388 (530)
                      ++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus       240 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i  319 (453)
T cd07094         240 DRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWV  319 (453)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618          389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ  468 (530)
Q Consensus       389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~  468 (530)
                      ++++.+|+++++||...   ++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus       320 ~~a~~~Ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~  396 (453)
T cd07094         320 EEAVEAGARLLCGGERD---GALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLN  396 (453)
T ss_pred             HHHHHCCCEEEeCccCC---CeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHH
Confidence            99999999999998653   689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          469 RTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       469 ~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++.++++++++|+||||++... .+.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus       397 ~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~~  453 (453)
T cd07094         397 VAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI  453 (453)
T ss_pred             HHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEeC
Confidence            9999999999999999998654 4689999999999999999999999999999863


No 74 
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00  E-value=5.4e-96  Score=781.15  Aligned_cols=449  Identities=33%  Similarity=0.519  Sum_probs=428.0

Q ss_pred             ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Q 009618           75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD  154 (530)
Q Consensus        75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~  154 (530)
                      +||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|++++++|++++++|++++++|+|||..+++.|+.
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~   80 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR   80 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHH
Q 009618          155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL  234 (530)
Q Consensus       155 ~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~  234 (530)
                      .+++.++|++..+++..+........+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~  160 (452)
T cd07102          81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE  160 (452)
T ss_pred             HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            99999999999888765543222223566788999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCH
Q 009618          235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL  314 (530)
Q Consensus       235 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~  314 (530)
                      .|.++++++|+|+|++|++++++ +.+..|+.|++|+.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       161 ~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl  239 (452)
T cd07102         161 RFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL  239 (452)
T ss_pred             HHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCH
Confidence            99999999999999999999966 78899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC
Q 009618          315 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK  394 (530)
Q Consensus       315 ~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~  394 (530)
                      |.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++..+++++++++++++.+
T Consensus       240 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~  319 (452)
T cd07102         240 DAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAK  319 (452)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618          395 GAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW  471 (530)
Q Consensus       395 Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~  471 (530)
                      |+++++||....   .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus       320 ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~  399 (452)
T cd07102         320 GARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE  399 (452)
T ss_pred             CCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence            999999997532   35789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       472 ~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++++++++|+||||++...++..||||+|+||+|+++|++|+++|++.|++++
T Consensus       400 ~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~  452 (452)
T cd07102         400 ALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL  452 (452)
T ss_pred             HHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence            99999999999999987777789999999999999999999999999999863


No 75 
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00  E-value=3.4e-96  Score=787.30  Aligned_cols=464  Identities=25%  Similarity=0.354  Sum_probs=420.5

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhc-HhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~-~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      ++||+|+|+.+ ++.+++++||.||+++++++. +.+|+++|+++|++|+ +.|+.+++.+|+++|++++++|++++++|
T Consensus         6 ~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~el   83 (521)
T PRK11903          6 ANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAY   83 (521)
T ss_pred             hhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            57999999975 357899999999999999997 8899999999999995 99999999999999999999999999999


Q ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC--------CCceeEEEEee-ceEEEEECCCCcchH
Q 009618          135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL--------PDRRLFVLKQP-VGVAGAITPWNFPLA  205 (530)
Q Consensus       135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~--------~g~~~~~~~~P-~GVv~~i~p~n~P~~  205 (530)
                      ++++++|+|||+.+++.|+..+++.++||++++..+.+.......        .....+..++| +|||++|+|||||+.
T Consensus        84 a~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~  163 (521)
T PRK11903         84 YDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAW  163 (521)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHH
Confidence            999999999999999999999999999999988776543211110        12234667899 699999999999999


Q ss_pred             HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHH
Q 009618          206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK  284 (530)
Q Consensus       206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~  284 (530)
                      .+++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+|+|++.++++.|   ++++.|+||||+++|+.
T Consensus       164 ~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~~  240 (521)
T PRK11903        164 GLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAAV  240 (521)
T ss_pred             HHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHHH
Confidence            999999999999999999999999999999999999999 99999999998666655544   78999999999999999


Q ss_pred             HHHHH--hcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHh
Q 009618          285 LMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV  357 (530)
Q Consensus       285 i~~~~--a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~  357 (530)
                      |++.+  +++++|+++|||||||+||++|||     ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|++++
T Consensus       241 v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~  320 (521)
T PRK11903        241 LRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARL  320 (521)
T ss_pred             HHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHH
Confidence            99864  478999999999999999999999     59999999999999999999999999999999999999999999


Q ss_pred             hccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC------CCCceEeceEecCCCC--CCccccc
Q 009618          358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKS--EMLVSRE  429 (530)
Q Consensus       358 ~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~------~~~~~~~Ptvl~~~~~--~~~~~~e  429 (530)
                      +++++|+|+++++++||++++.+++++.++++. ..+|+++++||....      .+|+|++|||+.++++  ++.+++|
T Consensus       321 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~e  399 (521)
T PRK11903        321 AKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDV  399 (521)
T ss_pred             HhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhC
Confidence            999999999999999999999999999999985 568999999996521      2478999999986554  4788999


Q ss_pred             ccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCC---------CCCCCcccC
Q 009618          430 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI---------STEVAPFGG  498 (530)
Q Consensus       430 E~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~v~vN~~~~---------~~~~~pfGG  498 (530)
                      |+||||++|++|+|+||+|+++|+++|||++||||+|.+++.++++++  ++|+||||+...         ..+.+||||
T Consensus       400 E~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG  479 (521)
T PRK11903        400 EVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGG  479 (521)
T ss_pred             cccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999  899999997542         345789999


Q ss_pred             CCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 009618          499 VKQSGLGRE-GSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       499 ~~~SG~G~~-~g~~~l~~~~~~k~v~~~  525 (530)
                      +|.||+|++ ||.+++++||+.|+|...
T Consensus       480 ~k~SG~Gr~~g~~~~l~~~t~~~~~~~~  507 (521)
T PRK11903        480 PGRAGGGEELGGLRALAFYHRRSAVQAS  507 (521)
T ss_pred             CCcCcCCcccccHHHHHHHhccceeeCC
Confidence            999999999 558999999998887543


No 76 
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions.  This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3  and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00  E-value=1.4e-95  Score=781.53  Aligned_cols=466  Identities=39%  Similarity=0.609  Sum_probs=441.9

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcC-CHHHHHHHHHHHHHHHHHhHHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL-TAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~-~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      .++||||+|+.+. +++++++||.||+++++++.++.+|+++++++|++|++.|+.+ +.++|.++|++++++|++++++
T Consensus         2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e   80 (473)
T cd07082           2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE   80 (473)
T ss_pred             CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3579999999864 6899999999999999999999999999999999999999998 9999999999999999999999


Q ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618          134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITR  209 (530)
Q Consensus       134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~  209 (530)
                      |++++++|+|||..++..|+..+++.++|+++..+++.+...+...    .+...+.+++|+|||++|+|||||+...++
T Consensus        81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~  160 (473)
T cd07082          81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS  160 (473)
T ss_pred             HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence            9999999999999999999999999999999998887665443321    355678899999999999999999999999


Q ss_pred             HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618          210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA  289 (530)
Q Consensus       210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~  289 (530)
                      ++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.++++.|+.|++++.|+||||+++|+.|++.+
T Consensus       161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  240 (473)
T cd07082         161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH  240 (473)
T ss_pred             HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999997778899999999999999999999999999987


Q ss_pred             hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618          290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                      +  ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.+++
T Consensus       241 ~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~  318 (473)
T cd07082         241 P--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNG  318 (473)
T ss_pred             C--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            6  89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH  449 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~  449 (530)
                      +++||++++.+++++++++++++.+|+++++||...  .++|++|||+.+++++|++++||+||||++|++|+|+||+|+
T Consensus       319 ~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~  396 (473)
T cd07082         319 VDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIE  396 (473)
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHH
Confidence            999999999999999999999999999999999764  378999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ++|+++|||+++|||+|.+++.++++++++|+||||++.... +.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       397 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~  473 (473)
T cd07082         397 LANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN  473 (473)
T ss_pred             HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence            999999999999999999999999999999999999976543 4689999999999999999999999999999763


No 77 
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00  E-value=1.1e-95  Score=781.33  Aligned_cols=455  Identities=30%  Similarity=0.450  Sum_probs=426.9

Q ss_pred             CCccccceecCEeeeCCCCCeEEeecCCCC-CEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH
Q 009618           51 GLLRTQGLIGGKWIDAYDGKTLEVHNPATG-EVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA  129 (530)
Q Consensus        51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g-~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~  129 (530)
                      ..++.++||||+|+.  ++++++++||.|+ +++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++
T Consensus        34 ~~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~  111 (500)
T TIGR01238        34 KTWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLEL  111 (500)
T ss_pred             CceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence            567889999999987  4789999999996 8999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618          130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR  209 (530)
Q Consensus       130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~  209 (530)
                      ++++|++++++|+|||..+++.|+..+++.++||++..+...+.            ..++|+|||++|+|||||+...++
T Consensus       112 ~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P~~~~~~  179 (500)
T TIGR01238       112 HMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFPLAIFTG  179 (500)
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchHHHHHHH
Confidence            99999999999999999999999999999999999887654321            358999999999999999999999


Q ss_pred             HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618          210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA  289 (530)
Q Consensus       210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~  289 (530)
                      ++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+.+|+.|++.+
T Consensus       180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~a  259 (500)
T TIGR01238       180 QISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTL  259 (500)
T ss_pred             HHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987778899999999999999999999999999999


Q ss_pred             hccc---ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCC
Q 009618          290 AGTV---KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF  366 (530)
Q Consensus       290 a~~~---~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~  366 (530)
                      +++.   +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus       260 a~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~  339 (500)
T TIGR01238       260 AQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH  339 (500)
T ss_pred             hhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence            9876   7999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc---cCCCCceEeceEecCCCCCCcccccccccceEEEEEeC-
Q 009618          367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK-  442 (530)
Q Consensus       367 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~---~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~-  442 (530)
                      ++++++||++++.++++++++++++++.|++++.++..   ...+|+|++|||+.+  ++|.+++||+||||++|++|+ 
T Consensus       340 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~  417 (500)
T TIGR01238       340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKA  417 (500)
T ss_pred             CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCC
Confidence            99999999999999999999999999999998754321   113579999999984  688899999999999999998 


Q ss_pred             -CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHHHHHhhhe
Q 009618          443 -TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLE  518 (530)
Q Consensus       443 -~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~~  518 (530)
                       ++||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.....  +.+||||+|.||+| +++|.+++++|++
T Consensus       418 ~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~  497 (500)
T TIGR01238       418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQ  497 (500)
T ss_pred             CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHh
Confidence             7999999999999999999999999999999999999999999876533  45799999999999 8999999999999


Q ss_pred             eeE
Q 009618          519 IKY  521 (530)
Q Consensus       519 ~k~  521 (530)
                      .|+
T Consensus       498 ~k~  500 (500)
T TIGR01238       498 VQY  500 (500)
T ss_pred             hcC
Confidence            884


No 78 
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00  E-value=1.8e-95  Score=777.44  Aligned_cols=451  Identities=45%  Similarity=0.727  Sum_probs=429.7

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      ++||.||+++++++.++.+|++.++++|++|++  .|+.++.++|.++|++++++|.+++++|++++++|+|||+.+++.
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~   80 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA   80 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            479999999999999999999999999999997  499999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL  231 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  231 (530)
                      |+..+++.++||+...+...+...+....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~  160 (457)
T cd07114          81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA  160 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence            99999999999998887765544443324566789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618          232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD  311 (530)
Q Consensus       232 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d  311 (530)
                      ++..++++|.++|+|+|++|++++++.+.++.|+.|++++.|+||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus       161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d  240 (457)
T cd07114         161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD  240 (457)
T ss_pred             HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence            99999999999999999999999977778999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618          312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA  391 (530)
Q Consensus       312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a  391 (530)
                      ||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.++++++
T Consensus       241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a  320 (457)
T cd07114         241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA  320 (457)
T ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618          392 VSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL  467 (530)
Q Consensus       392 ~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~  467 (530)
                      +.+|+++++||....    ..|+|++|||+.++++++.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.
T Consensus       321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~  400 (457)
T cd07114         321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL  400 (457)
T ss_pred             HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence            999999999997642    2478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       468 ~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus       401 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~  457 (457)
T cd07114         401 ARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI  457 (457)
T ss_pred             HHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence            999999999999999999877777889999999999999999999999999999864


No 79 
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00  E-value=1.3e-95  Score=806.63  Aligned_cols=464  Identities=26%  Similarity=0.364  Sum_probs=421.4

Q ss_pred             cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-cHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      ..++||||+|+.+ ++++++++||.||+++++++.++ +|++.|+++|++| ++.|+++++.+|+++|++++++|+++++
T Consensus         4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~   81 (675)
T PRK11563          4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKE   81 (675)
T ss_pred             cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            3468999999986 56789999999999999999987 6999999999998 7999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--------CcccCCCCCC-ceeEEEEeec-eEEEEECCCCc
Q 009618          133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNF  202 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--------g~~~~~~~~g-~~~~~~~~P~-GVv~~i~p~n~  202 (530)
                      +|++ +++|+|||+.+++.|+..+++.++||+..+++..        |...+...++ ...+..++|+ |||++|+||||
T Consensus        82 ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNf  160 (675)
T PRK11563         82 ELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNF  160 (675)
T ss_pred             HHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCch
Confidence            9998 5899999999999999999999999999886643        3333222112 2246788997 99999999999


Q ss_pred             chHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHH
Q 009618          203 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV  281 (530)
Q Consensus       203 P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~  281 (530)
                      |+.+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|+..   +.+..++.+++|+||||+++
T Consensus       161 P~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS~~~  237 (675)
T PRK11563        161 PVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGSAAT  237 (675)
T ss_pred             HHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECcHHH
Confidence            999999999999999999999999999999999999999999 99999999998532   23333467999999999999


Q ss_pred             HHHHHHH--HhcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHH
Q 009618          282 GKKLMAG--AAGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS  354 (530)
Q Consensus       282 g~~i~~~--~a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~  354 (530)
                      |+.|++.  +++++||+++|||||||+||++|||     +|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus       238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~  317 (675)
T PRK11563        238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALR  317 (675)
T ss_pred             HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHH
Confidence            9999985  4588999999999999999999995     99999999999999999999999999999999999999999


Q ss_pred             HHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceEeceEecCCCC--CCc
Q 009618          355 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS--EML  425 (530)
Q Consensus       355 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-------~~~~~~~~Ptvl~~~~~--~~~  425 (530)
                      ++++++++|+|+++++++||++++.+++++.+++++|+++ |++++||...       ..+|+|++|||+.++++  ++.
T Consensus       318 ~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~  396 (675)
T PRK11563        318 ARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA  396 (675)
T ss_pred             HHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence            9999999999999999999999999999999999999999 9999999531       12478999999999998  579


Q ss_pred             ccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCC--------C-CCCC
Q 009618          426 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI--------S-TEVA  494 (530)
Q Consensus       426 ~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~--------~-~~~~  494 (530)
                      +++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++  +|+||||..+.        . .+.+
T Consensus       397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~  476 (675)
T PRK11563        397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL  476 (675)
T ss_pred             HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999997  99999997521        1 2578


Q ss_pred             cccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 009618          495 PFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       495 pfGG~~~SG~G~~-~g~~~l~~~~~~k~v~~  524 (530)
                      ||||+|.||+|++ +|.+++++|++.|+|..
T Consensus       477 pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~  507 (675)
T PRK11563        477 VHGGPGRAGGGEELGGLRGVKHYMQRTAVQG  507 (675)
T ss_pred             CcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence            9999999999999 57999999999999864


No 80 
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00  E-value=2.6e-95  Score=775.57  Aligned_cols=447  Identities=41%  Similarity=0.659  Sum_probs=423.0

Q ss_pred             EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      ++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~   80 (452)
T cd07147           1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG   80 (452)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE  227 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~  227 (530)
                      |+..++..++|++..+.+..+...+..    ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~  160 (452)
T cd07147          81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS  160 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999998877655433221    1345667889999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618          228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI  307 (530)
Q Consensus       228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i  307 (530)
                      .+|.++..++++++++|+|+|++|+++++ .+.+..|+.|++++.|+||||+.+|+.|++.++  .+|+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~p~i  237 (452)
T cd07147         161 RTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNAAVI  237 (452)
T ss_pred             CCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCCcEE
Confidence            99999999999999999999999999984 567899999999999999999999999999876  469999999999999


Q ss_pred             EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618          308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF  387 (530)
Q Consensus       308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~  387 (530)
                      |++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus       238 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~  317 (452)
T cd07147         238 VDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW  317 (452)
T ss_pred             ECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618          388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL  467 (530)
Q Consensus       388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~  467 (530)
                      +++++.+|+++++||...   |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus       318 i~~a~~~Ga~~l~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~  394 (452)
T cd07147         318 VNEAVDAGAKLLTGGKRD---GALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDL  394 (452)
T ss_pred             HHHHHHCCCEEEecCCcC---CEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence            999999999999999763   68999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          468 QRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       468 ~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++.++++++++|+||||+.... .+.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus       395 ~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         395 EKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             HHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence            99999999999999999987654 4678999999999999999999999999999874


No 81 
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00  E-value=4.9e-95  Score=773.39  Aligned_cols=449  Identities=44%  Similarity=0.685  Sum_probs=426.1

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GE  152 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~E  152 (530)
                      ++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e   80 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE   80 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999998775 59


Q ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618          153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT  232 (530)
Q Consensus       153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~  232 (530)
                      +..+++.+++++..++.+.+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus        81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~  160 (450)
T cd07092          81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT  160 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence            99999999999988877655433222334567889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      +..+.+++++ |+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus       161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dA  239 (450)
T cd07092         161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA  239 (450)
T ss_pred             HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCC
Confidence            9999999999 999999999998777788999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++++++++.++++++.
T Consensus       240 dl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~  319 (450)
T cd07092         240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP  319 (450)
T ss_pred             CHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618          393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR  472 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~  472 (530)
                       +|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+++++
T Consensus       320 -~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~  398 (450)
T cd07092         320 -AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMR  398 (450)
T ss_pred             -cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence             9999999997643357899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++++++|+|+||++....+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus       399 ~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~~  450 (450)
T cd07092         399 LSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV  450 (450)
T ss_pred             HHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEeC
Confidence            9999999999999987777889999999999999999999999999999863


No 82 
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00  E-value=4.5e-95  Score=771.41  Aligned_cols=440  Identities=39%  Similarity=0.617  Sum_probs=419.1

Q ss_pred             CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 009618           80 GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF  159 (530)
Q Consensus        80 g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~  159 (530)
                      |+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~   80 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE   80 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH-HHHHH
Q 009618          160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAE  238 (530)
Q Consensus       160 l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~-~~l~~  238 (530)
                      +++++..+....+...+.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+.+
T Consensus        81 l~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~  159 (443)
T cd07152          81 LHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR  159 (443)
T ss_pred             HHHHHHhHHHhCCcccccc-CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence            9999987766555544432 456678899999999999999999999999999999999999999999999996 78999


Q ss_pred             HHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHH
Q 009618          239 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV  318 (530)
Q Consensus       239 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~  318 (530)
                      ++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|+
T Consensus       160 ~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa  238 (443)
T cd07152         160 LFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAA  238 (443)
T ss_pred             HHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHH
Confidence            99999999999999998 56788999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeE
Q 009618          319 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV  398 (530)
Q Consensus       319 ~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v  398 (530)
                      +.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.+++++++.+|+++
T Consensus       239 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v  318 (443)
T cd07152         239 SNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARL  318 (443)
T ss_pred             HHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc
Q 009618          399 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE  478 (530)
Q Consensus       399 l~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~  478 (530)
                      ++||...   |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++++++
T Consensus       319 l~gg~~~---g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~  395 (443)
T cd07152         319 EAGGTYD---GLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLR  395 (443)
T ss_pred             EeccCcC---CEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCC
Confidence            9999753   6899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEECCCCCCC-CCCcccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 009618          479 YGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       479 ~G~v~vN~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~  524 (530)
                      +|+||||++.... +.+||||+|.||+| +++|++||++|++.|++++
T Consensus       396 ~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~  443 (443)
T cd07152         396 TGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV  443 (443)
T ss_pred             cCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence            9999999877654 57999999999999 8899999999999999864


No 83 
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00  E-value=7.2e-95  Score=772.60  Aligned_cols=450  Identities=64%  Similarity=1.031  Sum_probs=432.6

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV  153 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev  153 (530)
                      ++||.||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev   80 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV   80 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618          154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA  233 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~  233 (530)
                      ..+++.++|++..+++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~  160 (451)
T cd07103          81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA  160 (451)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence            99999999999988877766555444567788999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618          234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD  313 (530)
Q Consensus       234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD  313 (530)
                      ..+.++|+++|+|+|+++++++++.+.++.|+.|++++.|+||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus       161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad  240 (451)
T cd07103         161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD  240 (451)
T ss_pred             HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence            99999999999999999999987777889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618          314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS  393 (530)
Q Consensus       314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~  393 (530)
                      ++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||++++.+++++.+++++++.
T Consensus       241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~  320 (451)
T cd07103         241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA  320 (451)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618          394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV  473 (530)
Q Consensus       394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~  473 (530)
                      +|+++++||.....+|+|++|||+.++++++.++++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus       321 ~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~  400 (451)
T cd07103         321 KGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRV  400 (451)
T ss_pred             CCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence            99999999976533578999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      ++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       401 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         401 AEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             HHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            99999999999998877788999999999999999999999999999985


No 84 
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00  E-value=6.2e-95  Score=773.30  Aligned_cols=449  Identities=42%  Similarity=0.666  Sum_probs=426.1

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-HHHHHH
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL-KEAVGE  152 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~E  152 (530)
                      ++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e   80 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE   80 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence            4799999999999999999999999999999999999999999999999999999999999999999999997 699999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618          153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT  232 (530)
Q Consensus       153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~  232 (530)
                      +..+++.++|++.....+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus        81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~  159 (457)
T cd07108          81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence            99999999999998877666554432 35566788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      +..+.+++.++ +|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus       160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dA  238 (457)
T cd07108         160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA  238 (457)
T ss_pred             HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCC
Confidence            99999999986 99999999998777888999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHH-HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA  391 (530)
Q Consensus       313 D~~~a~~~i~~s-~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a  391 (530)
                      |++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus       239 dl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a  318 (457)
T cd07108         239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLG  318 (457)
T ss_pred             CHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence            999999999999 4999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HH-CCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009618          392 VS-KGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN  466 (530)
Q Consensus       392 ~~-~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d  466 (530)
                      ++ +|+++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus       319 ~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d  398 (457)
T cd07108         319 LSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRD  398 (457)
T ss_pred             HhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCC
Confidence            98 9999999997642    347899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHH-HHhhheeeEEEE
Q 009618          467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYG-MDEFLEIKYVCL  524 (530)
Q Consensus       467 ~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~-l~~~~~~k~v~~  524 (530)
                      .++++++++++++|+|+||++....+.+||||+|.||+|+++|.++ +++|++.|+|++
T Consensus       399 ~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~~  457 (457)
T cd07108         399 LGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVNI  457 (457)
T ss_pred             HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEeC
Confidence            9999999999999999999987777789999999999999999866 799999999863


No 85 
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00  E-value=1.1e-94  Score=771.29  Aligned_cols=447  Identities=41%  Similarity=0.642  Sum_probs=424.2

Q ss_pred             ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Q 009618           75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD  154 (530)
Q Consensus        75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~  154 (530)
                      +||+||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~   80 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL   80 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCcc-cCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618          155 YGAKFIEFYAEEAKRVYGEI-IPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL  231 (530)
Q Consensus       155 ~~~~~l~~~a~~~~~~~g~~-~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  231 (530)
                      .+++.++|+++.+.+..+.. .+..  ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~  160 (453)
T cd07099          81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL  160 (453)
T ss_pred             HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence            99999999999887765442 2211  24567889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618          232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD  311 (530)
Q Consensus       232 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d  311 (530)
                      ++..|.+++.++|+|+|++|++++++ +.+..|+.| .|+.|+||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus       161 ~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~d  238 (453)
T cd07099         161 VGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLAD  238 (453)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCC
Confidence            99999999999999999999999865 788899987 5999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618          312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA  391 (530)
Q Consensus       312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a  391 (530)
                      ||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++++++
T Consensus       239 adl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a  318 (453)
T cd07099         239 ADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDA  318 (453)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618          392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW  471 (530)
Q Consensus       392 ~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~  471 (530)
                      +++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus       319 ~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~  398 (453)
T cd07099         319 VAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAE  398 (453)
T ss_pred             HhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHH
Confidence            99999999999764234789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          472 RVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       472 ~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      ++++++++|+||||+...  ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus       399 ~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         399 AIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             HHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            999999999999998754  3468999999999999999999999999999985


No 86 
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00  E-value=1.5e-94  Score=767.23  Aligned_cols=444  Identities=43%  Similarity=0.641  Sum_probs=419.0

Q ss_pred             EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618           73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE  152 (530)
Q Consensus        73 ~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E  152 (530)
                      +++||+||+++++++.++.+|++.++++|+++   |+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus         2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e   78 (451)
T cd07146           2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE   78 (451)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence            47899999999999999999999999998864   888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCC
Q 009618          153 VDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF  228 (530)
Q Consensus       153 v~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~  228 (530)
                      +..+++.++||++.+....+...+..    ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~  158 (451)
T cd07146          79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK  158 (451)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            99999999999998877655443321    13455678999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEE
Q 009618          229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV  308 (530)
Q Consensus       229 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV  308 (530)
                      +|+++..+.++++++|+|+|++|++++++.++++.|+.|++++.|+||||+.+|+.|++.++  .+++++|+|||||+||
T Consensus       159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV  236 (451)
T cd07146         159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV  236 (451)
T ss_pred             chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence            99999999999999999999999999877788999999999999999999999999998775  6899999999999999


Q ss_pred             ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618          309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV  388 (530)
Q Consensus       309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i  388 (530)
                      ++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++++++
T Consensus       237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v  316 (451)
T cd07146         237 MDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRV  316 (451)
T ss_pred             CCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618          389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ  468 (530)
Q Consensus       389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~  468 (530)
                      ++++.+|+++++||...   |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       317 ~~a~~~Ga~vl~gg~~~---g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~  393 (451)
T cd07146         317 EEAIAQGARVLLGNQRQ---GALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLD  393 (451)
T ss_pred             HHHHhCCCEEEeCCCcC---CEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence            99999999999998653   689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCC-CCCChHHHHHhhheeeEEEE
Q 009618          469 RTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGL-GREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       469 ~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~-G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++++++++++|+||||+.... .+.+||||+|.||+ |+++|++|+++|++.|+|++
T Consensus       394 ~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~~  451 (451)
T cd07146         394 TIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL  451 (451)
T ss_pred             HHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEeC
Confidence            9999999999999999986543 46799999999995 89999999999999999863


No 87 
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA)  to succinate.  SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731).  The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00  E-value=2.7e-94  Score=761.54  Aligned_cols=428  Identities=43%  Similarity=0.667  Sum_probs=406.8

Q ss_pred             HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Q 009618           94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE  173 (530)
Q Consensus        94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~  173 (530)
                      ++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++.|+..+++.++||+..+++..+.
T Consensus         1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~   80 (429)
T cd07100           1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD   80 (429)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999998876543


Q ss_pred             -ccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618          174 -IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV  252 (530)
Q Consensus       174 -~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~  252 (530)
                       ..+.  ++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+
T Consensus        81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~  158 (429)
T cd07100          81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN  158 (429)
T ss_pred             eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence             2322  2456788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCc
Q 009618          253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT  332 (530)
Q Consensus       253 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~  332 (530)
                      +++++ +.+..|+.|++|+.|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus       159 v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~  237 (429)
T cd07100         159 LLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQS  237 (429)
T ss_pred             EeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCC
Confidence            99854 56789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceE
Q 009618          333 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY  412 (530)
Q Consensus       333 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~  412 (530)
                      |++++|||||+++||+|+++|+++++++++|+|+|+++++||++++.+++++.+++++++.+|+++++||...+..|+|+
T Consensus       238 C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~  317 (429)
T cd07100         238 CIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFY  317 (429)
T ss_pred             CCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997643346899


Q ss_pred             eceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCC
Q 009618          413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE  492 (530)
Q Consensus       413 ~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~  492 (530)
                      +|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|+||||++....+
T Consensus       318 ~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~  397 (429)
T cd07100         318 PPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDP  397 (429)
T ss_pred             cCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887777


Q ss_pred             CCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          493 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       493 ~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      .+||||+|.||+|+++|++++++|++.|+|++
T Consensus       398 ~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  429 (429)
T cd07100         398 RLPFGGVKRSGYGRELGRFGIREFVNIKTVWV  429 (429)
T ss_pred             CCCcCCccccccCCcchHHHHHHhcceeEEeC
Confidence            89999999999999999999999999999863


No 88 
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde  derived from cellular lipid peroxidation.
Probab=100.00  E-value=9.8e-94  Score=765.67  Aligned_cols=450  Identities=34%  Similarity=0.552  Sum_probs=420.4

Q ss_pred             ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHH
Q 009618           75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV  153 (530)
Q Consensus        75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev  153 (530)
                      +||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||+.+++ .|+
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~   80 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI   80 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999996 599


Q ss_pred             HHHHHHHHHHHHHHHHHhCc-ccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcH
Q 009618          154 DYGAKFIEFYAEEAKRVYGE-IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP  230 (530)
Q Consensus       154 ~~~~~~l~~~a~~~~~~~g~-~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~  230 (530)
                      ..+++.++|++..+...... ..+..  ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  160 (465)
T cd07098          81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA  160 (465)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence            99999999999887664332 22221  1234567889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH----HHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccE
Q 009618          231 LTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC  306 (530)
Q Consensus       231 ~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~  306 (530)
                      +++..++++    |.++|+|+|++|+|++++ +.++.|+.|++|+.|.||||+.+|+.|++.+++++||+++|+|||||+
T Consensus       161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~  239 (465)
T cd07098         161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPA  239 (465)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeE
Confidence            999876655    578999999999999955 789999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHH
Q 009618          307 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET  386 (530)
Q Consensus       307 iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~  386 (530)
                      ||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.+
T Consensus       240 iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~  319 (465)
T cd07098         240 IVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEE  319 (465)
T ss_pred             EECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEE
Q 009618          387 FVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI  462 (530)
Q Consensus       387 ~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v  462 (530)
                      ++++++.+|+++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus       320 ~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i  399 (465)
T cd07098         320 LVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASV  399 (465)
T ss_pred             HHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence            99999999999999986532    24799999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCHHHHHHHHhhccceEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          463 FTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       463 ~s~d~~~~~~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ||+|.+++.++++++++|+||||....  ..+.+||||+|.||+|+++|++++++|++.|+|+++
T Consensus       400 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         400 FGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             EcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence            999999999999999999999998653  246899999999999999999999999999999774


No 89 
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=7.3e-94  Score=813.44  Aligned_cols=464  Identities=31%  Similarity=0.468  Sum_probs=435.2

Q ss_pred             CccccceecCEeeeCCCCCeEEeecCCCCC-EEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618           52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH  130 (530)
Q Consensus        52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~-~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~  130 (530)
                      .+....+|+|      ++++++++||.|++ ++++++.++.++++.|++.|++||+.|+.++..+|+++|++++++|+++
T Consensus       550 ~~~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~  623 (1038)
T PRK11904        550 QWQAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEAN  623 (1038)
T ss_pred             CceecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence            4566678888      36789999999988 9999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--cCCCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618          131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI--IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT  208 (530)
Q Consensus       131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~--~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~  208 (530)
                      +++|+.++++|+|||+.++..|+..++++|+||+..+++..+..  ++.. .++.+...++|+|||++|+|||||+.+++
T Consensus       624 ~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~-~ge~n~~~~~P~GVv~~IsPwNfPlai~~  702 (1038)
T PRK11904        624 RAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGP-TGESNELRLHGRGVFVCISPWNFPLAIFL  702 (1038)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCC-CCceeEEEEecceEEEEECCCccHHHHHH
Confidence            99999999999999999999999999999999999998876542  2322 36788999999999999999999999999


Q ss_pred             HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618          209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG  288 (530)
Q Consensus       209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~  288 (530)
                      +++++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+.|.+.
T Consensus       703 ~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~  782 (1038)
T PRK11904        703 GQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRT  782 (1038)
T ss_pred             HHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999998


Q ss_pred             Hhcc---cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618          289 AAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG  365 (530)
Q Consensus       289 ~a~~---~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p  365 (530)
                      ++.+   ++|+++|+|||||+||++|||+|+|++.+++|+|.++||+|++++++|||++++|+|+++|+++++++++|+|
T Consensus       783 ~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp  862 (1038)
T PRK11904        783 LAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDP  862 (1038)
T ss_pred             HhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCc
Confidence            8865   7899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeC-
Q 009618          366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK-  442 (530)
Q Consensus       366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~-  442 (530)
                      .++++++||+|++.+++++.++|+++.. |+++++||..++  ..|+|+.|||+..  +++.+++||+||||++|++|+ 
T Consensus       863 ~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~  939 (1038)
T PRK11904        863 RLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKA  939 (1038)
T ss_pred             ccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCC
Confidence            9999999999999999999999999765 899999997653  2479999999974  677889999999999999998 


Q ss_pred             -CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHHHHHhhhe
Q 009618          443 -TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLE  518 (530)
Q Consensus       443 -~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~~  518 (530)
                       ++||+|+++|+++|||+++|||+|.++++++++++++|+||||+...+.  ..+||||+|.||+| +.||+++|++|++
T Consensus       940 ~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~ 1019 (1038)
T PRK11904        940 SDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFAT 1019 (1038)
T ss_pred             CCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhc
Confidence             6899999999999999999999999999999999999999999987654  35899999999999 5699999999999


Q ss_pred             eeEEEEe
Q 009618          519 IKYVCLG  525 (530)
Q Consensus       519 ~k~v~~~  525 (530)
                      .|+|+++
T Consensus      1020 ~ktv~~~ 1026 (1038)
T PRK11904       1020 EKTVTVN 1026 (1038)
T ss_pred             eEEEEEc
Confidence            9999875


No 90 
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the  aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC  of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00  E-value=3.4e-93  Score=760.27  Aligned_cols=450  Identities=48%  Similarity=0.767  Sum_probs=428.2

Q ss_pred             eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-H
Q 009618           74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-E  152 (530)
Q Consensus        74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-E  152 (530)
                      ++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e   80 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD   80 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            379999999999999999999999999999999999999999999999999999999999999999999999998864 9


Q ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618          153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT  232 (530)
Q Consensus       153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~  232 (530)
                      +..+++.++||++...+..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus        81 v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~  159 (455)
T cd07093          81 IPRAAANFRFFADYILQLDGESYPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT  159 (455)
T ss_pred             HHHHHHHHHHHHHhHHHhCCccccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence            99999999999988776544433322 35677889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      +..+.++++++|+|+|+++++++++.+.++.|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus       160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA  239 (455)
T cd07093         160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA  239 (455)
T ss_pred             HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence            99999999999999999999998777889999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+.+++.+++++++
T Consensus       240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  319 (455)
T cd07093         240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR  319 (455)
T ss_pred             CHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618          393 SKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ  468 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~  468 (530)
                      .+|+++++||....    .+++|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus       320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~  399 (455)
T cd07093         320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG  399 (455)
T ss_pred             HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence            99999999997642    24789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      +++++++++++|+|+||+....++.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       400 ~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~~  455 (455)
T cd07093         400 RAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI  455 (455)
T ss_pred             HHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEeC
Confidence            99999999999999999988877889999999999999999999999999999863


No 91 
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00  E-value=3.6e-93  Score=760.26  Aligned_cols=448  Identities=46%  Similarity=0.731  Sum_probs=423.9

Q ss_pred             EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618           72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG  151 (530)
Q Consensus        72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  151 (530)
                      |+++||.||+++++++.++.++++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~   80 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK   80 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence            45799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE  227 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~  227 (530)
                      |+..+++.++|+++.+.+..+...+..    ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~  160 (453)
T cd07149          81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS  160 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999988877665543321    1133457889999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618          228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI  307 (530)
Q Consensus       228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i  307 (530)
                      .+|+++..+.+++.++|+|+|++|++++++.++++.|+.|+++++|+||||+++|+.|++.++  ++|+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i  238 (453)
T cd07149         161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI  238 (453)
T ss_pred             cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence            999999999999999999999999999877777899999999999999999999999998875  789999999999999


Q ss_pred             EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618          308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF  387 (530)
Q Consensus       308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~  387 (530)
                      |++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.++
T Consensus       239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~  318 (453)
T cd07149         239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW  318 (453)
T ss_pred             ECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618          388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL  467 (530)
Q Consensus       388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~  467 (530)
                      +++++.+|+++++||...   ++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus       319 i~~a~~~ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~  395 (453)
T cd07149         319 VEEAVEGGARLLTGGKRD---GAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDL  395 (453)
T ss_pred             HHHHHHCCCEEEeCCCCC---CeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCH
Confidence            999999999999998653   68999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          468 QRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       468 ~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++++++++++++|+||||+.... .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       396 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~~  453 (453)
T cd07149         396 QKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF  453 (453)
T ss_pred             HHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEeC
Confidence            99999999999999999987653 4678999999999999999999999999999863


No 92 
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate.  The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00  E-value=2.3e-92  Score=749.69  Aligned_cols=442  Identities=23%  Similarity=0.325  Sum_probs=404.8

Q ss_pred             ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhh--hcCCHHHH----HHHHHHHHHHHHHh
Q 009618           57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW--SKLTAAER----SKGLRKWYDLLMAH  130 (530)
Q Consensus        57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w--~~~~~~~R----~~iL~~~a~~l~~~  130 (530)
                      +||+|+|+.+  +++++++||.||+++++++.++.+|++.|+++|++||+.|  +.++..+|    .++|+++++.|+++
T Consensus         1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~   78 (489)
T cd07126           1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP   78 (489)
T ss_pred             CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence            4799999885  5789999999999999999999999999999999999988  56779999    89999999999998


Q ss_pred             --HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCccc--CCCCCCceeEEEEeeceEEEEECCCCcchHH
Q 009618          131 --KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII--PATLPDRRLFVLKQPVGVAGAITPWNFPLAM  206 (530)
Q Consensus       131 --~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~--~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~  206 (530)
                        .++|++++++|+|||+.+++.|+..+++.++||++...+..+...  +...++...+++++|+|||++|+|||||+.+
T Consensus        79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l  158 (489)
T cd07126          79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI  158 (489)
T ss_pred             CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence              499999999999999999999999999999999998877766542  2223456778999999999999999999999


Q ss_pred             HHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHH
Q 009618          207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM  286 (530)
Q Consensus       207 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~  286 (530)
                      .++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+ +..|+.|+++++|+||||+++|+.|.
T Consensus       159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~  237 (489)
T cd07126         159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLA  237 (489)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999986655 45688899999999999999999999


Q ss_pred             HHHhcccceEEeecCCCccEEEecCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhccccCC
Q 009618          287 AGAAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD  364 (530)
Q Consensus       287 ~~~a~~~~~~~lelgG~~~~iV~~dA-D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~  364 (530)
                      ..++   +++.+|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++++|+
T Consensus       238 ~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~  314 (489)
T cd07126         238 LELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED  314 (489)
T ss_pred             HHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC
Confidence            8876   5789999999999999999 999999999999999999999999999999995 6999999999999999874


Q ss_pred             CCCCCcccCccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCC----CC-ceEeceEecC------CCCCCcccccccc
Q 009618          365 GFGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSL----GM-TFYEPTVLSN------VKSEMLVSREEVF  432 (530)
Q Consensus       365 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~vl~gg~~~~~----~~-~~~~Ptvl~~------~~~~~~~~~eE~F  432 (530)
                           +++||+++.. .+++.++++++++ +|+++++||.....    ++ .|++|||+..      ++++|++++||+|
T Consensus       315 -----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiF  388 (489)
T cd07126         315 -----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVF  388 (489)
T ss_pred             -----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCc
Confidence                 5789999998 9999999999997 99999999976431    23 3899999952      5789999999999


Q ss_pred             cceEEEEEeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceE--EEECCCCCCCCC----CcccCCCCCCC
Q 009618          433 GPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL--VGVNEGLISTEV----APFGGVKQSGL  504 (530)
Q Consensus       433 GPv~~i~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~--v~vN~~~~~~~~----~pfGG~~~SG~  504 (530)
                      |||++|++|+|  +||||+++|+++|||++||||+|.++++++++++++|+  |+||+...+++.    .||||+|.||+
T Consensus       389 GPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~  468 (489)
T cd07126         389 GPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGI  468 (489)
T ss_pred             CCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCC
Confidence            99999999999  99999999999999999999999999999999999999  668887776554    89999999999


Q ss_pred             CCCChH
Q 009618          505 GREGSK  510 (530)
Q Consensus       505 G~~~g~  510 (530)
                      |+++..
T Consensus       469 g~~~~~  474 (489)
T cd07126         469 GTPEAI  474 (489)
T ss_pred             CCHhHH
Confidence            998754


No 93 
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00  E-value=2.6e-92  Score=738.14  Aligned_cols=406  Identities=42%  Similarity=0.689  Sum_probs=386.4

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECC
Q 009618          120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITP  199 (530)
Q Consensus       120 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p  199 (530)
                      |++++++|++++++|++++++|+|||+.+++.|+..+++.++||+.+++...+...+...++...+++++|+|||++|+|
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p   80 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP   80 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence            57899999999999999999999999999999999999999999999887766543333335567889999999999999


Q ss_pred             CCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCH
Q 009618          200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST  279 (530)
Q Consensus       200 ~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~  279 (530)
                      ||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|++++.+.++.|+.|++|++|+||||+
T Consensus        81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~  160 (409)
T PRK10090         81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV  160 (409)
T ss_pred             CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence            99999999999999999999999999999999999999999999999999999999777889999999999999999999


Q ss_pred             HHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc
Q 009618          280 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN  359 (530)
Q Consensus       280 ~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~  359 (530)
                      .+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++
T Consensus       161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~  240 (409)
T PRK10090        161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA  240 (409)
T ss_pred             HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCC-CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEE
Q 009618          360 LKVGDGFGE-GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL  438 (530)
Q Consensus       360 ~~~G~p~~~-~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i  438 (530)
                      +++|+|.++ ++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus       241 ~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v  320 (409)
T PRK10090        241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPV  320 (409)
T ss_pred             cCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEE
Confidence            999999998 9999999999999999999999999999999999765334689999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhhe
Q 009618          439 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE  518 (530)
Q Consensus       439 ~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~  518 (530)
                      ++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.....+..||||+|+||+|+++|.+|+++|++
T Consensus       321 ~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f~~  400 (409)
T PRK10090        321 VAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQ  400 (409)
T ss_pred             EEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999988766678999999999999999999999999


Q ss_pred             eeEEEEe
Q 009618          519 IKYVCLG  525 (530)
Q Consensus       519 ~k~v~~~  525 (530)
                      .|+|+++
T Consensus       401 ~k~v~~~  407 (409)
T PRK10090        401 TQVVYLQ  407 (409)
T ss_pred             eEEEEEe
Confidence            9999764


No 94 
>PLN02203 aldehyde dehydrogenase
Probab=100.00  E-value=8.6e-92  Score=746.11  Aligned_cols=432  Identities=29%  Similarity=0.440  Sum_probs=404.5

Q ss_pred             CCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Q 009618           88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEE  166 (530)
Q Consensus        88 ~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~  166 (530)
                      .+..+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.
T Consensus         2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~   81 (484)
T PLN02203          2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN   81 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999999999999999999995 6999999999999998


Q ss_pred             HHHHhCcc---cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHc
Q 009618          167 AKRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA  243 (530)
Q Consensus       167 ~~~~~g~~---~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a  243 (530)
                      .++..+..   .+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~  161 (484)
T PLN02203         82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY  161 (484)
T ss_pred             HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence            87775532   222123456789999999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec---CCCHHHHHHH
Q 009618          244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD---DADLNVAVNG  320 (530)
Q Consensus       244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~---dAD~~~a~~~  320 (530)
                       +|+|++|+++| +.++++.|+.|+ ++.|+||||+++|+.|++.++++++|+++|+|||||+||++   |||+|.|++.
T Consensus       162 -lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~  238 (484)
T PLN02203        162 -LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNR  238 (484)
T ss_pred             -CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHH
Confidence             99999999998 778999999995 99999999999999999999999999999999999999997   6999999999


Q ss_pred             HHHHHhh-ccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEe
Q 009618          321 ALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL  399 (530)
Q Consensus       321 i~~s~f~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl  399 (530)
                      +++++|. |+||.|++++|+|||++++|+|+++|.++++++++|+|.++ +++||++++.+++++++++++++.+ ++++
T Consensus       239 i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~  316 (484)
T PLN02203        239 IVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIV  316 (484)
T ss_pred             HHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEE
Confidence            9999996 89999999999999999999999999999999999999986 6899999999999999999999887 7899


Q ss_pred             eCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccc
Q 009618          400 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY  479 (530)
Q Consensus       400 ~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~  479 (530)
                      +||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus       317 ~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~  395 (484)
T PLN02203        317 HGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSS  395 (484)
T ss_pred             eCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence            998753 3579999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          480 GLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       480 G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |.||||++..  ..+.+||||+|+||+|+++|.+++++|++.|+|+++
T Consensus       396 G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~  443 (484)
T PLN02203        396 GSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRR  443 (484)
T ss_pred             ceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEc
Confidence            9999998754  336799999999999999999999999999999876


No 95 
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=5.4e-92  Score=804.07  Aligned_cols=454  Identities=29%  Similarity=0.447  Sum_probs=424.8

Q ss_pred             CCccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH
Q 009618           51 GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA  129 (530)
Q Consensus        51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~  129 (530)
                      ..++....|+|+.   ..+..++++||.| ++++++++.++.+|++.|+++|++|++.|+.+|..+|+++|++++++|++
T Consensus       643 ~~~~~~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~  719 (1318)
T PRK11809        643 QKWQAAPMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEA  719 (1318)
T ss_pred             CCcccCCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            3456677888842   2467899999999 89999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618          130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR  209 (530)
Q Consensus       130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~  209 (530)
                      ++++|+.++++|+|||+.++..||.+++++|+||+.+++....            ...++|+|||++|+|||||+.++++
T Consensus       720 ~~~eL~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g  787 (1318)
T PRK11809        720 QMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTG  787 (1318)
T ss_pred             CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHH
Confidence            9999999999999999999999999999999999988765311            2458999999999999999999999


Q ss_pred             HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618          210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA  289 (530)
Q Consensus       210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~  289 (530)
                      ++++||++||+||+|||++||+++..++++++++|+|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus       788 ~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~a  867 (1318)
T PRK11809        788 QVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNL  867 (1318)
T ss_pred             HHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999998


Q ss_pred             hccc------ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccC
Q 009618          290 AGTV------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG  363 (530)
Q Consensus       290 a~~~------~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G  363 (530)
                      ++++      +|+++|+||+||+||++|||+|+|++.+++|+|.++||+|++.+++|||++++|+|+++|+++++++++|
T Consensus       868 A~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vG  947 (1318)
T PRK11809        868 AGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMG  947 (1318)
T ss_pred             hhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence            8775      8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEE
Q 009618          364 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC  440 (530)
Q Consensus       364 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~  440 (530)
                      +|.+.++++||+|++.+.+++.++|++++.+|++++.|+....   ..|+|++|||+..  +++.++++|+||||++|++
T Consensus       948 dP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809        948 NPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred             CcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEE
Confidence            9999999999999999999999999999999999999875432   3479999999985  6788899999999999999


Q ss_pred             eC--CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCCC-CChHHHHHh
Q 009618          441 FK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDE  515 (530)
Q Consensus       441 ~~--~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G~-~~g~~~l~~  515 (530)
                      |+  ++||+|+++|+++|||+++|||+|.+++.++++++++|+||||+...+.  ..+||||+|.||+|+ .||+++|.+
T Consensus      1026 ~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~ 1105 (1318)
T PRK11809       1026 YNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYR 1105 (1318)
T ss_pred             eCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHH
Confidence            97  7999999999999999999999999999999999999999999987754  358999999999996 599999999


Q ss_pred             hheeeE
Q 009618          516 FLEIKY  521 (530)
Q Consensus       516 ~~~~k~  521 (530)
                      |++.+.
T Consensus      1106 f~~~~~ 1111 (1318)
T PRK11809       1106 LLATRP 1111 (1318)
T ss_pred             HhccCC
Confidence            999873


No 96 
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00  E-value=6e-92  Score=742.62  Aligned_cols=426  Identities=35%  Similarity=0.529  Sum_probs=399.4

Q ss_pred             HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009618           93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG  172 (530)
Q Consensus        93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g  172 (530)
                      |++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|++....+..+
T Consensus         1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~   80 (431)
T cd07095           1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG   80 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999988877765


Q ss_pred             cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618          173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV  252 (530)
Q Consensus       173 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~  252 (530)
                      ..... .++...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus        81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~  159 (431)
T cd07095          81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL  159 (431)
T ss_pred             CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence            44322 23567889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc-cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618          253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ  331 (530)
Q Consensus       253 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~-~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ  331 (530)
                      +++ +.+.++.|+.|++++.|+||||+++|+.|++.++.+ .+++++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus       160 v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ  238 (431)
T cd07095         160 VQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQ  238 (431)
T ss_pred             EeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            998 457889999999999999999999999999987754 699999999999999999999999999999999999999


Q ss_pred             ccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 009618          332 TCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT  410 (530)
Q Consensus       332 ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~  410 (530)
                      .|++++|||||++ ++|+|+++|.++++++++|+|.++++.+||+++..+++++.+++++++.+|+++++||...+.+++
T Consensus       239 ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~  318 (431)
T cd07095         239 RCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTA  318 (431)
T ss_pred             CCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCe
Confidence            9999999999999 999999999999999999999999999999999999999999999999999999999975434579


Q ss_pred             eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC
Q 009618          411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS  490 (530)
Q Consensus       411 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~  490 (530)
                      |++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+||||.....
T Consensus       319 ~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~  397 (431)
T cd07095         319 FLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTG  397 (431)
T ss_pred             EEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCC
Confidence            9999999 688999999999999999999999999999999999999999999999999999999999999999986653


Q ss_pred             -CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          491 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       491 -~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                       .+.+||||+|.||+|+++|.+|++ |++.|++
T Consensus       398 ~~~~~PfGG~k~SG~G~~~g~~~~~-~~~~~~~  429 (431)
T cd07095         398 ASSTAPFGGVGLSGNHRPSAYYAAD-YCAYPVA  429 (431)
T ss_pred             CCCCCCCCCcccccCCCCChHHHHH-HHhhhhc
Confidence             356899999999999999999999 5555554


No 97 
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28)  involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00  E-value=1.6e-91  Score=742.91  Aligned_cols=429  Identities=43%  Similarity=0.704  Sum_probs=409.2

Q ss_pred             HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009618           93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG  172 (530)
Q Consensus        93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g  172 (530)
                      |++++++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++....+..+
T Consensus         1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~   80 (431)
T cd07104           1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG   80 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999988877666


Q ss_pred             cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH-HHHHHHHHHHcCCCCccEE
Q 009618          173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVN  251 (530)
Q Consensus       173 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~-~~~l~~~l~~aGlP~gvv~  251 (530)
                      ...+....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|++|
T Consensus        81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~  160 (431)
T cd07104          81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN  160 (431)
T ss_pred             ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence            555544356778899999999999999999999999999999999999999999999998 5789999999999999999


Q ss_pred             eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618          252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ  331 (530)
Q Consensus       252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ  331 (530)
                      ++++++.++++.|+.|++++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus       161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ  240 (431)
T cd07104         161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ  240 (431)
T ss_pred             EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            99997778899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618          332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF  411 (530)
Q Consensus       332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~  411 (530)
                      .|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||...   |+|
T Consensus       241 ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~~---g~~  317 (431)
T cd07104         241 ICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYE---GLF  317 (431)
T ss_pred             CcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCC---Cce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998653   689


Q ss_pred             EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC
Q 009618          412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST  491 (530)
Q Consensus       412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~  491 (530)
                      ++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++...+
T Consensus       318 ~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~  397 (431)
T cd07104         318 YQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVND  397 (431)
T ss_pred             ECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             -CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          492 -EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       492 -~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                       +.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       398 ~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~  431 (431)
T cd07104         398 EPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV  431 (431)
T ss_pred             CCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence             689999999999999999999999999999863


No 98 
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00  E-value=2.4e-91  Score=740.18  Aligned_cols=427  Identities=41%  Similarity=0.632  Sum_probs=403.2

Q ss_pred             HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009618           93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG  172 (530)
Q Consensus        93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g  172 (530)
                      |++.++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++..|+..+++.++|+++......+
T Consensus         1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~   80 (432)
T cd07105           1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG   80 (432)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999998876544


Q ss_pred             cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618          173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV  252 (530)
Q Consensus       173 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~  252 (530)
                      ...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus        81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~  160 (432)
T cd07105          81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV  160 (432)
T ss_pred             eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence            44443334566788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCC---chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhcc
Q 009618          253 VMGN---APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS  329 (530)
Q Consensus       253 v~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~  329 (530)
                      ++++   +.++++.|+.|++|+.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus       161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~  240 (432)
T cd07105         161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS  240 (432)
T ss_pred             EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence            9974   3457899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CC
Q 009618          330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LG  408 (530)
Q Consensus       330 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~  408 (530)
                      ||.|++++++|||++++|+|+++|+++++++++|     ++++||++++.+++++.+++++++++|+++++||.... .+
T Consensus       241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~  315 (432)
T cd07105         241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPS  315 (432)
T ss_pred             CCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence            9999999999999999999999999999999998     68899999999999999999999999999999997653 35


Q ss_pred             CceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCC
Q 009618          409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL  488 (530)
Q Consensus       409 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~  488 (530)
                      ++|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+||||++.
T Consensus       316 ~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~  395 (432)
T cd07105         316 GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMT  395 (432)
T ss_pred             CeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             CC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          489 IS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       489 ~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      .. .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       396 ~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~  432 (432)
T cd07105         396 VHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI  432 (432)
T ss_pred             CCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence            54 4679999999999999999999999999999864


No 99 
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00  E-value=2.6e-91  Score=737.62  Aligned_cols=427  Identities=31%  Similarity=0.475  Sum_probs=399.9

Q ss_pred             CCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHH
Q 009618           89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA  167 (530)
Q Consensus        89 ~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~  167 (530)
                      ++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++||+..+
T Consensus         2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~   81 (436)
T cd07135           2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL   81 (436)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999997 59999999999999988


Q ss_pred             HHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHc
Q 009618          168 KRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA  243 (530)
Q Consensus       168 ~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a  243 (530)
                      .++.+...+..    ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++++ 
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-  160 (436)
T cd07135          82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-  160 (436)
T ss_pred             HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence            77643322211    1245678899999999999999999999999999999999999999999999999999999999 


Q ss_pred             CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHH
Q 009618          244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALA  323 (530)
Q Consensus       244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~  323 (530)
                      |+|+|++|++++++.+. ..|+.|+ |+.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++
T Consensus       161 ~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~  238 (436)
T cd07135         161 YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW  238 (436)
T ss_pred             hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHH
Confidence            69999999999866555 4689999 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 009618          324 AKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR  403 (530)
Q Consensus       324 s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~  403 (530)
                      ++|.++||.|++++|||||++++|+|+++|+++++++++|+| ++++++||+++..+.+++.++++++   |+++++||.
T Consensus       239 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~  314 (436)
T cd07135         239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE  314 (436)
T ss_pred             HHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC
Confidence            999999999999999999999999999999999999999999 9999999999999999999999986   889999997


Q ss_pred             ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEE
Q 009618          404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG  483 (530)
Q Consensus       404 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~  483 (530)
                      .. .+++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus       315 ~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~  393 (436)
T cd07135         315 MD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVV  393 (436)
T ss_pred             cC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEE
Confidence            65 35799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ECCCCCC--CCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          484 VNEGLIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       484 vN~~~~~--~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      ||+....  .+.+||||+|.||+|+++|.+|+++|++.|+|.
T Consensus       394 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         394 INDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             ECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            9987643  468999999999999999999999999999873


No 100
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=7.6e-91  Score=796.98  Aligned_cols=457  Identities=30%  Similarity=0.449  Sum_probs=427.5

Q ss_pred             CccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618           52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH  130 (530)
Q Consensus        52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~  130 (530)
                      .+....+|+|+...   +.+++++||.| ++++++++.++.++++.|++.|++||+.|+.++.++|+++|++++++|+++
T Consensus       552 ~~~~~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~  628 (1208)
T PRK11905        552 TWHAAPLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAH  628 (1208)
T ss_pred             Ceeecceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHh
Confidence            45556778886443   66799999999 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618          131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK  210 (530)
Q Consensus       131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  210 (530)
                      +++|+.++++|+||++.++..|+.+++++++||+..++...+            ...++|+|||++|+|||||+.+++++
T Consensus       629 ~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~  696 (1208)
T PRK11905        629 MPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQ  696 (1208)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHH
Confidence            999999999999999999999999999999999998866532            13568999999999999999999999


Q ss_pred             HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      +++||++||+||+|||+.+|+++..++++|+++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|.+.++
T Consensus       697 i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A  776 (1208)
T PRK11905        697 IAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLA  776 (1208)
T ss_pred             HHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988889999999999999999999999999999988


Q ss_pred             cc---cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618          291 GT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG  367 (530)
Q Consensus       291 ~~---~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~  367 (530)
                      ++   .+|+++|+|||||+||++|||+|+|++.+++|+|.++||+|++.+++|||++++|+|+++|+++++++++|+|.+
T Consensus       777 ~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d  856 (1208)
T PRK11905        777 KRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR  856 (1208)
T ss_pred             hhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchh
Confidence            76   489999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeC--CH
Q 009618          368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TE  444 (530)
Q Consensus       368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~  444 (530)
                      .++++||+|++++++++.++|+++..+|+.++.|+.... .+|+|+.|||+..  +++.+++||+||||++|++|+  ++
T Consensus       857 ~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dl  934 (1208)
T PRK11905        857 LSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADEL  934 (1208)
T ss_pred             ccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCH
Confidence            999999999999999999999999999998888764322 3579999999974  678899999999999999998  69


Q ss_pred             HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCCC-CChHHHHHhhheeeE
Q 009618          445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDEFLEIKY  521 (530)
Q Consensus       445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~  521 (530)
                      ||+|+++|+++||||++|||+|.+++.++++++++|+||||+...+.  ..+||||+|.||+|+ .||+++|.+|++.|+
T Consensus       935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~ 1014 (1208)
T PRK11905        935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAP 1014 (1208)
T ss_pred             HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcce
Confidence            99999999999999999999999999999999999999999987755  358999999999996 799999999999999


Q ss_pred             EEEe
Q 009618          522 VCLG  525 (530)
Q Consensus       522 v~~~  525 (530)
                      |+++
T Consensus      1015 v~~~ 1018 (1208)
T PRK11905       1015 TPIP 1018 (1208)
T ss_pred             eecc
Confidence            9864


No 101
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616)  most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00  E-value=6e-91  Score=734.75  Aligned_cols=420  Identities=30%  Similarity=0.481  Sum_probs=392.9

Q ss_pred             HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCc-
Q 009618           96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGE-  173 (530)
Q Consensus        96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~-  173 (530)
                      +.+++|++||+.|+.+++.+|+++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++.+.+. 
T Consensus         2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (449)
T cd07136           2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK   81 (449)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999999999999999999999999999997 59999999999999988776544 


Q ss_pred             ccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618          174 IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN  251 (530)
Q Consensus       174 ~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~  251 (530)
                      ..+..  ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~  160 (449)
T cd07136          82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA  160 (449)
T ss_pred             ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence            22211  12456788999999999999999999999999999999999999999999999999999999998 9999999


Q ss_pred             eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618          252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ  331 (530)
Q Consensus       252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ  331 (530)
                      +++| +.+.+..|+.|+ |+.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|+||
T Consensus       161 ~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ  238 (449)
T cd07136         161 VVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQ  238 (449)
T ss_pred             EEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCC
Confidence            9998 557788899775 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618          332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF  411 (530)
Q Consensus       332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~  411 (530)
                      .|++++|+|||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++     +++++||... .+|+|
T Consensus       239 ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~~-~~g~~  311 (449)
T cd07136         239 TCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTD-RETLY  311 (449)
T ss_pred             cccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCcC-CCCCE
Confidence            999999999999999999999999999999999998 8999999999999999999976     4899999764 35789


Q ss_pred             EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-
Q 009618          412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-  490 (530)
Q Consensus       412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-  490 (530)
                      ++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+.... 
T Consensus       312 ~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~  391 (449)
T cd07136         312 IEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHL  391 (449)
T ss_pred             EeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999987643 


Q ss_pred             -CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          491 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       491 -~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                       .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus       392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  427 (449)
T cd07136         392 ANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK  427 (449)
T ss_pred             cCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence             36799999999999999999999999999999876


No 102
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD.  In Arabidopsis thaliana, stress-regulated expression of ALDH3I1  was observed in  leaves and osmotic stress expression of  ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00  E-value=8.5e-91  Score=732.91  Aligned_cols=423  Identities=30%  Similarity=0.456  Sum_probs=394.4

Q ss_pred             HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618           96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI  174 (530)
Q Consensus        96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~  174 (530)
                      .++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.++||+....+..+..
T Consensus         3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   82 (432)
T cd07137           3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE   82 (432)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            4889999999999999999999999999999999999999999999999999996 599999999999999886655432


Q ss_pred             ---cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618          175 ---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN  251 (530)
Q Consensus       175 ---~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~  251 (530)
                         .+........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|
T Consensus        83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~  161 (432)
T cd07137          83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK  161 (432)
T ss_pred             ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence               121122345678999999999999999999999999999999999999999999999999999999995 9999999


Q ss_pred             eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHh-hccC
Q 009618          252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF-RNSG  330 (530)
Q Consensus       252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f-~~~G  330 (530)
                      +++| +.+.++.|+.| ++++|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+|
T Consensus       162 ~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~G  239 (432)
T cd07137         162 VIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNG  239 (432)
T ss_pred             EEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCC
Confidence            9998 56788899987 6999999999999999999999999999999999999999999999999999999999 5999


Q ss_pred             CccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 009618          331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT  410 (530)
Q Consensus       331 Q~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~  410 (530)
                      |.|++++|+|||++++|+|+++|.++++++++|+| ++++++||++++.+++++.+++++++. |+++++||... .+++
T Consensus       240 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~  316 (432)
T cd07137         240 QACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNL  316 (432)
T ss_pred             CcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCC
Confidence            99999999999999999999999999999999999 568999999999999999999999998 89999998653 3579


Q ss_pred             eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC
Q 009618          411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS  490 (530)
Q Consensus       411 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~  490 (530)
                      |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||.+...
T Consensus       317 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~  396 (432)
T cd07137         317 YIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQ  396 (432)
T ss_pred             EEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987653


Q ss_pred             --CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618          491 --TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       491 --~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~  524 (530)
                        .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       397 ~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~  432 (432)
T cd07137         397 YAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY  432 (432)
T ss_pred             ccCCCCCCCCcCcCcCCccccHHHHHHhccCceeeC
Confidence              3679999999999999999999999999999863


No 103
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00  E-value=2.4e-89  Score=730.57  Aligned_cols=430  Identities=29%  Similarity=0.457  Sum_probs=400.4

Q ss_pred             CCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHH
Q 009618           89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA  167 (530)
Q Consensus        89 ~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~  167 (530)
                      .+.+|++.++++|++||+.|+.++.++|.++|++++++|++|+++|++++++|+|||..++. .|+..+++.++|+++..
T Consensus         4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~   83 (493)
T PTZ00381          4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL   83 (493)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999996 59999999999999887


Q ss_pred             HHHhCcc-cC--CCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC
Q 009618          168 KRVYGEI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG  244 (530)
Q Consensus       168 ~~~~g~~-~~--~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG  244 (530)
                      ++..... ..  ........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ 
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-  162 (493)
T PTZ00381         84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-  162 (493)
T ss_pred             HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-
Confidence            7754332 11  1112345788999999999999999999999999999999999999999999999999999999996 


Q ss_pred             CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHH
Q 009618          245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA  324 (530)
Q Consensus       245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s  324 (530)
                      +|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++.++++
T Consensus       163 lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g  240 (493)
T PTZ00381        163 LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWG  240 (493)
T ss_pred             CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHH
Confidence            99999999998 677888999987 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 009618          325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR  404 (530)
Q Consensus       325 ~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~  404 (530)
                      +|.|+||.|+|++++|||++++|+|+++|++.++++. |++.++++++||+++.++++++.++++   .+|+++++||..
T Consensus       241 ~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~  316 (493)
T PTZ00381        241 KFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV  316 (493)
T ss_pred             HHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc
Confidence            9999999999999999999999999999999999986 777788999999999999999999996   379999999976


Q ss_pred             cCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEE
Q 009618          405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV  484 (530)
Q Consensus       405 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~v  484 (530)
                      + .++.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus       317 ~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~I  395 (493)
T PTZ00381        317 D-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVI  395 (493)
T ss_pred             C-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence            4 346899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          485 NEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       485 N~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      |+...  ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus       396 N~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~  439 (493)
T PTZ00381        396 NDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS  439 (493)
T ss_pred             CCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence            98754  3468999999999999999999999999999998764


No 104
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00  E-value=2.6e-89  Score=723.17  Aligned_cols=422  Identities=33%  Similarity=0.456  Sum_probs=392.1

Q ss_pred             HHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-HHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618           97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAV-GEVDYGAKFIEFYAEEAKRVYGEI  174 (530)
Q Consensus        97 av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~  174 (530)
                      .+++|++||+.|+.+++.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.++||++.+.+..+..
T Consensus         3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~   82 (434)
T cd07133           3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS   82 (434)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5788999999999999999999999999999999999999999999985 56764 699999999999999887655433


Q ss_pred             c-CC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618          175 I-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN  251 (530)
Q Consensus       175 ~-~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~  251 (530)
                      . ..  ...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++++++ +|+|++|
T Consensus        83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~  161 (434)
T cd07133          83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA  161 (434)
T ss_pred             ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence            2 11  112445788999999999999999999999999999999999999999999999999999999997 9999999


Q ss_pred             eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618          252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ  331 (530)
Q Consensus       252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ  331 (530)
                      ++++ +.+.++.|+.|+ ++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus       162 ~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ  239 (434)
T cd07133         162 VVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQ  239 (434)
T ss_pred             EEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCC
Confidence            9998 557888898776 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCC
Q 009618          332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGM  409 (530)
Q Consensus       332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~  409 (530)
                      .|++++|||||++++|+|+++|+++++++++|+  ++++++||++++.+++++.+++++++.+|+++++||....  .++
T Consensus       240 ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g  317 (434)
T cd07133         240 TCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAAT  317 (434)
T ss_pred             cccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCC
Confidence            999999999999999999999999999999986  4788999999999999999999999999999999987642  347


Q ss_pred             ceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 009618          410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI  489 (530)
Q Consensus       410 ~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~  489 (530)
                      +|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+||||++..
T Consensus       318 ~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  397 (434)
T cd07133         318 RKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLL  397 (434)
T ss_pred             cEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999998764


Q ss_pred             --CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          490 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       490 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                        .++.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus       398 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         398 HVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             ccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence              3478999999999999999999999999999874


No 105
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00  E-value=3.8e-89  Score=721.70  Aligned_cols=424  Identities=31%  Similarity=0.475  Sum_probs=398.2

Q ss_pred             HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618           96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI  174 (530)
Q Consensus        96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~  174 (530)
                      +++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++|++.......+..
T Consensus         2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (433)
T cd07134           2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK   81 (433)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5788999999999999999999999999999999999999999999999999997 799999999999998766544322


Q ss_pred             -c--CCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618          175 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN  251 (530)
Q Consensus       175 -~--~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~  251 (530)
                       .  +....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++++++ +|+|+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~  160 (433)
T cd07134          82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA  160 (433)
T ss_pred             ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence             2  11123566789999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618          252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ  331 (530)
Q Consensus       252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ  331 (530)
                      ++++ +.+.+..|+.|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.++||
T Consensus       161 ~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ  238 (433)
T cd07134         161 VFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQ  238 (433)
T ss_pred             EEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCC
Confidence            9998 567889999998 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCeEEEehhhHHHHHHHHHHHhhccccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 009618          332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT  410 (530)
Q Consensus       332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~  410 (530)
                      .|++++++|||++++|+|+++|+++++.++.|+| .+.++++||++++.+.+++.+++++++.+|+++++||... .+++
T Consensus       239 ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~  317 (433)
T cd07134         239 TCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQR  317 (433)
T ss_pred             cccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCC
Confidence            9999999999999999999999999999988887 8899999999999999999999999999999999999764 3468


Q ss_pred             eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC
Q 009618          411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS  490 (530)
Q Consensus       411 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~  490 (530)
                      |++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.++++++++++++|+||||+....
T Consensus       318 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~  397 (433)
T cd07134         318 YIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLH  397 (433)
T ss_pred             EEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987653


Q ss_pred             --CCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          491 --TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       491 --~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                        .+.+||||+|+||+|+++|++++++||+.|+|.
T Consensus       398 ~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         398 FLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             cCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence              467999999999999999999999999999885


No 106
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1  (ALDH3A1, ALDH3B1,  EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00  E-value=5.4e-88  Score=714.32  Aligned_cols=421  Identities=31%  Similarity=0.470  Sum_probs=389.7

Q ss_pred             HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618           96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI  174 (530)
Q Consensus        96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~  174 (530)
                      .++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|+++.++...+..
T Consensus         2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (443)
T cd07132           2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE   81 (443)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5789999999999999999999999999999999999999999999999999996 699999999999998887765433


Q ss_pred             cCCC---CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618          175 IPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN  251 (530)
Q Consensus       175 ~~~~---~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~  251 (530)
                      .+..   ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~  160 (443)
T cd07132          82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP  160 (443)
T ss_pred             cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence            2211   12345788999999999999999999999999999999999999999999999999999999986 9999999


Q ss_pred             eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618          252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ  331 (530)
Q Consensus       252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ  331 (530)
                      ++++++ +.+..|+. ++|+.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus       161 vv~g~~-~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ  238 (443)
T cd07132         161 VVLGGV-EETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQ  238 (443)
T ss_pred             EEeCCH-HHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            999854 44566775 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618          332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF  411 (530)
Q Consensus       332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~  411 (530)
                      .|++++|||||++++|+|+++|.+++++++.|+| ++++++||++++.+++++.+++++     +++++||... .+++|
T Consensus       239 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~  311 (443)
T cd07132         239 TCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERY  311 (443)
T ss_pred             ceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCE
Confidence            9999999999999999999999999999999988 789999999999999999999863     5899999764 35789


Q ss_pred             EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-
Q 009618          412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-  490 (530)
Q Consensus       412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-  490 (530)
                      ++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++... 
T Consensus       312 ~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~  391 (443)
T cd07132         312 IAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHY  391 (443)
T ss_pred             EeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999987653 


Q ss_pred             -CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          491 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       491 -~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                       .+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus       392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~  428 (443)
T cd07132         392 TLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS  428 (443)
T ss_pred             CCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence             367999999999999999999999999999998763


No 107
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1  (ALDH3A1, ALDH3B1,  EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar  sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00  E-value=1.2e-86  Score=702.24  Aligned_cols=418  Identities=34%  Similarity=0.532  Sum_probs=387.2

Q ss_pred             HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618           96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI  174 (530)
Q Consensus        96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~  174 (530)
                      .++++|++||+.|+.++..+|+++|++++++|++++++|++++++|+|||+.++. .|+..+++.++|++....+..+..
T Consensus         2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~   81 (426)
T cd07087           2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR   81 (426)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            3889999999999999999999999999999999999999999999999987775 599999999999998877654432


Q ss_pred             -c--CCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618          175 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN  251 (530)
Q Consensus       175 -~--~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~  251 (530)
                       .  +....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++++ |+|+|++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~  160 (426)
T cd07087          82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA  160 (426)
T ss_pred             ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence             1  1112345678899999999999999999999999999999999999999999999999999999999 69999999


Q ss_pred             eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618          252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ  331 (530)
Q Consensus       252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ  331 (530)
                      +++++ .+.+..|+.|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.++||
T Consensus       161 vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ  238 (426)
T cd07087         161 VVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQ  238 (426)
T ss_pred             EEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCC
Confidence            99984 46688999998 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618          332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF  411 (530)
Q Consensus       332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~  411 (530)
                      .|+++++||||++++|+|+++|.+.+++++.|+| ++++++||++++.+.+++.++++++     ++++||... .+|+|
T Consensus       239 ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~  311 (426)
T cd07087         239 TCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERY  311 (426)
T ss_pred             ccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCE
Confidence            9999999999999999999999999999986666 5789999999999999999999754     899998764 35789


Q ss_pred             EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--
Q 009618          412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--  489 (530)
Q Consensus       412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~--  489 (530)
                      ++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+...  
T Consensus       312 ~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~  391 (426)
T cd07087         312 IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHA  391 (426)
T ss_pred             EeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998764  


Q ss_pred             CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          490 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       490 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus       392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         392 AIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             CCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence            3468999999999999999999999999999874


No 108
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=3.3e-86  Score=666.03  Aligned_cols=478  Identities=29%  Similarity=0.437  Sum_probs=434.1

Q ss_pred             Cccccccccccccccchhhhcc------CCccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHH
Q 009618           29 TPAFSRQMSVGMKSVTDRLRDS------GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSA  101 (530)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A  101 (530)
                      .|.++.+++++..+....++..      ..|+....++|+-+.  .|+..+++||.+ .+++++|..++.+|+++|++.|
T Consensus        82 ~R~NSaG~Dlsne~~la~L~~al~~~a~~~w~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A  159 (769)
T COG4230          82 GRVNSAGLDLSNEHRLASLSSALLASAGQKWQAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAA  159 (769)
T ss_pred             ccccccccCcchHHHHHHHHHHHHhhhhhhhccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHH
Confidence            4667777777665544444321      346677889888766  488899999999 5678999999999999999999


Q ss_pred             HHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCC
Q 009618          102 FDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD  181 (530)
Q Consensus       102 ~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g  181 (530)
                      .+|++.|..+|+.+|+.+|++++++|+.+..+|..++++|.||++.++..||.++++||+||+.++++-.++        
T Consensus       160 ~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~--------  231 (769)
T COG4230         160 VAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN--------  231 (769)
T ss_pred             HhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc--------
Confidence            999999999999999999999999999999999999999999999999999999999999999998763332        


Q ss_pred             ceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHH
Q 009618          182 RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIG  261 (530)
Q Consensus       182 ~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~  261 (530)
                          ..++|+|+|+||+|||||+.++..+++.||++||+|+.||+++||+.+..-+++++++|+|++++++++|+|+.+|
T Consensus       232 ----~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvG  307 (769)
T COG4230         232 ----LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVG  307 (769)
T ss_pred             ----cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccc
Confidence                3457999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhcCCCceEEEeeCCHHHHHHHHHHHhc---ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCe
Q 009618          262 DALLTSPQVRKITFTGSTAVGKKLMAGAAG---TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR  338 (530)
Q Consensus       262 ~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~---~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~  338 (530)
                      ..|+.++++++|+||||+++++.|.++.++   ...|++.|+||.|+|||+.+|--++++.+++.|+|.++||+|++.+.
T Consensus       308 a~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRv  387 (769)
T COG4230         308 AALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRV  387 (769)
T ss_pred             hhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhh
Confidence            999999999999999999999999999887   35789999999999999999999999999999999999999999999


Q ss_pred             EEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEe
Q 009618          339 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVL  417 (530)
Q Consensus       339 v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl  417 (530)
                      +|+++++.|..+++|+..+.++++|+|....|++||+|+.+..+.++++|+..+..|-++..-....+ ..|.|+.||++
T Consensus       388 LclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~  467 (769)
T COG4230         388 LCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLI  467 (769)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeE
Confidence            99999999999999999999999999999999999999999999999999987777655433222221 25899999999


Q ss_pred             cCCCCCCcccccccccceEEEEEeC--CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCC--C
Q 009618          418 SNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE--V  493 (530)
Q Consensus       418 ~~~~~~~~~~~eE~FGPv~~i~~~~--~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~--~  493 (530)
                      +.  ++..-++.|+||||++|++|+  ++|++|+.+|.++||||.+|||+..+.+.++.+++++|++|||+..++..  .
T Consensus       468 El--~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGV  545 (769)
T COG4230         468 EL--ENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGV  545 (769)
T ss_pred             Ec--CCHHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEee
Confidence            86  455567899999999999998  67999999999999999999999999999999999999999999988664  7


Q ss_pred             CcccCCCCCCCCCC-ChHHHHHhhheeeEE
Q 009618          494 APFGGVKQSGLGRE-GSKYGMDEFLEIKYV  522 (530)
Q Consensus       494 ~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v  522 (530)
                      +||||.+.||+|.+ ||+.+|..|+..+..
T Consensus       546 QPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~  575 (769)
T COG4230         546 QPFGGEGLSGTGPKAGGPLYLLRLVSERPW  575 (769)
T ss_pred             ccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence            99999999999999 999999999987754


No 109
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00  E-value=4.9e-84  Score=686.66  Aligned_cols=419  Identities=26%  Similarity=0.343  Sum_probs=380.3

Q ss_pred             HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 009618           94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--  171 (530)
Q Consensus        94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--  171 (530)
                      +++|++.|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|++..+++..  
T Consensus         1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~   80 (454)
T cd07129           1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL   80 (454)
T ss_pred             ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            468999999999999999999999999999999999999999999999999999999999999999999998876432  


Q ss_pred             CcccCCC------CCCceeEEEEeeceEEEEECCCCcchHH--HHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH---
Q 009618          172 GEIIPAT------LPDRRLFVLKQPVGVAGAITPWNFPLAM--ITRKVGPALACGCTVVVKPSEFTPLTALAAAELA---  240 (530)
Q Consensus       172 g~~~~~~------~~g~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l---  240 (530)
                      +...+..      .++...+.+++|+|||++|+|||||+..  .++++++||++||+||+|||+.+|+++..+++++   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~  160 (454)
T cd07129          81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA  160 (454)
T ss_pred             cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence            2222111      1133457889999999999999999987  5589999999999999999999999999888776   


Q ss_pred             -HHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc--ccceEEeecCCCccEEEecCC---CH
Q 009618          241 -LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDA---DL  314 (530)
Q Consensus       241 -~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~--~~~~~~lelgG~~~~iV~~dA---D~  314 (530)
                       .++|+|+|++|+|++++.+.++.|++|++|++|+||||+.+|+.|++.+++  ++||+++|+|||||+||++||   |+
T Consensus       161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl  240 (454)
T cd07129         161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG  240 (454)
T ss_pred             HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence             589999999999999777789999999999999999999999999999988  699999999999999999999   89


Q ss_pred             HHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618          315 NVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS  393 (530)
Q Consensus       315 ~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~  393 (530)
                      |.|++.+++++|.|+||.|++++|||||++ ++|+|+++|.++++++++          ||++++.+.++..+.++++++
T Consensus       241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~  310 (454)
T cd07129         241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAA  310 (454)
T ss_pred             HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999 999999999999999976          477788888888899999999


Q ss_pred             C-CCeEeeCCcccCCCCceEeceEecCCC---CCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCC--H
Q 009618          394 K-GAKVLLGGRRHSLGMTFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN--L  467 (530)
Q Consensus       394 ~-Ga~vl~gg~~~~~~~~~~~Ptvl~~~~---~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d--~  467 (530)
                      + |+++++||... .+++|++|||+...+   ++|++++||+||||++|++|+|.||+|+++|+++|||++||||+|  .
T Consensus       311 ~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~  389 (454)
T cd07129         311 APGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL  389 (454)
T ss_pred             cCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence            8 99999999764 357999999998665   689999999999999999999999999999999999999999999  8


Q ss_pred             HHHHHHHhhc--cceEEEECCCCCCC---CCCcccC-CCCCCCCCC--ChHHHHHhhheeeEEEEe
Q 009618          468 QRTWRVSEAL--EYGLVGVNEGLIST---EVAPFGG-VKQSGLGRE--GSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       468 ~~~~~~a~~l--~~G~v~vN~~~~~~---~~~pfGG-~~~SG~G~~--~g~~~l~~~~~~k~v~~~  525 (530)
                      +++++++++|  ++|+||||++....   +.+|||| +|.||+|++  +|.+++++||++  ||+.
T Consensus       390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~--~~~~  453 (454)
T cd07129         390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP--VCYQ  453 (454)
T ss_pred             HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc--cccC
Confidence            9999999999  69999999876543   4899999 999999999  789999999986  4543


No 110
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00  E-value=1.4e-82  Score=679.38  Aligned_cols=429  Identities=24%  Similarity=0.296  Sum_probs=378.7

Q ss_pred             ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH---
Q 009618           75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG---  151 (530)
Q Consensus        75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~---  151 (530)
                      +||+|++++++++.++.   +.++++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+|||+.+++.   
T Consensus        70 ~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gk  146 (551)
T TIGR02288        70 RSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGG  146 (551)
T ss_pred             cCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccC
Confidence            89999999999999986   899999999999999999999999999999999999999999999999999999864   


Q ss_pred             --HHHHHHHHHHHHHHHHHHHhCccc---CCCCCCc---eeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEe
Q 009618          152 --EVDYGAKFIEFYAEEAKRVYGEII---PATLPDR---RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV  223 (530)
Q Consensus       152 --Ev~~~~~~l~~~a~~~~~~~g~~~---~~~~~g~---~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl  223 (530)
                        ++.+.++.++|++....++.+...   +....+.   .....++|+|||++|+|||||+++.++++++||++||+||+
T Consensus       147 p~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVl  226 (551)
T TIGR02288       147 PHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLV  226 (551)
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEE
Confidence              788899999999999888766543   2211111   12347899999999999999999999999999999999999


Q ss_pred             ecCCCcHHHHH----HHHHHHHHcCCCCccEEeecCC-chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEe
Q 009618          224 KPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSL  298 (530)
Q Consensus       224 Kps~~~~~~~~----~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~l  298 (530)
                      |||+.+|+++.    .+.+++.++|+|+|++|++++. +.++++.|+.||+|++|.||||+++|+.|++.++  .+++++
T Consensus       227 KPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~l  304 (551)
T TIGR02288       227 KPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYT  304 (551)
T ss_pred             ECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEe
Confidence            99999999665    5679999999999999999985 6788999999999999999999999999998876  479999


Q ss_pred             ecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHhhccccCCCCCCC
Q 009618          299 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAVKNLKVGDGFGEG  369 (530)
Q Consensus       299 elgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~G~p~~~~  369 (530)
                      |+|||||+||++|||+|.+++.+++++|.|+||.|++++|+|||++         +||+|+++|+++++++ +|+|.++.
T Consensus       305 ElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~  383 (551)
T TIGR02288       305 EKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARAT  383 (551)
T ss_pred             ecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccccc
Confidence            9999999999999999999999999999999999999999999999         7999999999999999 99999999


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE  445 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~  445 (530)
                      +++||++++.+++++    +++++.| ++++||....    .+++|++|||+....++|++++||+||||++|++|+|+|
T Consensus       384 ~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~d  458 (551)
T TIGR02288       384 AVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGA  458 (551)
T ss_pred             ccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHH
Confidence            999999999999996    5666778 6666665421    233688999996544599999999999999999999999


Q ss_pred             HHHHHHHcC--CCC-cEEEEEcCCHHHHHHHHhhc----------cceEEEECCCCCCCCCCcccCCCCCCCCCC-ChHH
Q 009618          446 EAIHMANDT--NAG-LAAYIFTNNLQRTWRVSEAL----------EYGLVGVNEGLISTEVAPFGGVKQSGLGRE-GSKY  511 (530)
Q Consensus       446 eai~~~n~~--~~g-L~a~v~s~d~~~~~~~a~~l----------~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~-~g~~  511 (530)
                      |||+++|++  +|| |+++|||+|.+++.++.+++          ++|.|+||.      ..||++.+.||.... +..+
T Consensus       459 eAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~------~~~~~~~~~sg~n~~a~~~~  532 (551)
T TIGR02288       459 HAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQ------SAAFSDFHGTGGNPAANASL  532 (551)
T ss_pred             HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEcc------CCCCCCCCCCCCCCccCCcc
Confidence            999999998  566 99999999999999999999          667777765      346888888888776 4445


Q ss_pred             HHHhhheee
Q 009618          512 GMDEFLEIK  520 (530)
Q Consensus       512 ~l~~~~~~k  520 (530)
                      .--.|...+
T Consensus       533 ~~~~~~~~r  541 (551)
T TIGR02288       533 SDGAFVANR  541 (551)
T ss_pred             cchhhhhcc
Confidence            555565544


No 111
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in  metabolic pathways, or as  binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme  is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00  E-value=6.8e-82  Score=670.01  Aligned_cols=429  Identities=52%  Similarity=0.835  Sum_probs=408.0

Q ss_pred             HHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Q 009618           95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI  174 (530)
Q Consensus        95 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~  174 (530)
                      +++++.|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+||+..+++.|+..+++.+++++...+.+.+..
T Consensus         1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~   80 (432)
T cd07078           1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV   80 (432)
T ss_pred             CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            36889999999999999999999999999999999999999999999999999999999999999999998887766554


Q ss_pred             cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeec
Q 009618          175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM  254 (530)
Q Consensus       175 ~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~  254 (530)
                      .+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|++++++++
T Consensus        81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~  160 (432)
T cd07078          81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT  160 (432)
T ss_pred             ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence            33223467788999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccc
Q 009618          255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV  334 (530)
Q Consensus       255 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~  334 (530)
                      +++.+.+..|+.|++++.|.||||..+++.|.+.++++++|+++|+||+|++||++|+|++.+++.+++++|.++||.|+
T Consensus       161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~  240 (432)
T cd07078         161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT  240 (432)
T ss_pred             cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence            87666889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceEe
Q 009618          335 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYE  413 (530)
Q Consensus       335 a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~-~~~~~~  413 (530)
                      ++++||||++++|+|+++|.++++++++|+|+|+++++||++++.+++++.++++++.++|+++++||..... +|+|++
T Consensus       241 a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~  320 (432)
T cd07078         241 AASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVP  320 (432)
T ss_pred             CCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999876532 479999


Q ss_pred             ceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CC
Q 009618          414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TE  492 (530)
Q Consensus       414 Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~  492 (530)
                      |||+.++++++++++||+||||++|++|+|+||+|+++|+.++||+++|||+|.+.++++++++++|+|+||+.... .+
T Consensus       321 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~  400 (432)
T cd07078         321 PTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEP  400 (432)
T ss_pred             cEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998876 78


Q ss_pred             CCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618          493 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       493 ~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      .+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       401 ~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         401 SAPFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             CCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            8999999999999999999999999999985


No 112
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00  E-value=1.6e-82  Score=672.37  Aligned_cols=415  Identities=19%  Similarity=0.204  Sum_probs=375.8

Q ss_pred             HHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--C
Q 009618           95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--G  172 (530)
Q Consensus        95 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--g  172 (530)
                      +.|++.|++||+.|+.++..+|+++|+++++.|++++++|++++++|+|||. ++..|+..+++.++||+..+....  +
T Consensus         2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~   80 (442)
T cd07084           2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH   80 (442)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence            5789999999999999999999999999999999999999999999999999 777899999999999998886531  1


Q ss_pred             cccC--CCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCC-CCcc
Q 009618          173 EIIP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGV  249 (530)
Q Consensus       173 ~~~~--~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGl-P~gv  249 (530)
                      ....  ....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++++++|+ |+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~  160 (442)
T cd07084          81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED  160 (442)
T ss_pred             cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence            1111  111134678899999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             EEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC-CHHHHHHHHHHHHhhc
Q 009618          250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRN  328 (530)
Q Consensus       250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA-D~~~a~~~i~~s~f~~  328 (530)
                      ++++++++. .+..|+.|++++.|+||||+++|+.|++.++.  +|+++|+|||||+||++|| |+|.+++.+++++|.|
T Consensus       161 ~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~  237 (442)
T cd07084         161 VTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC  237 (442)
T ss_pred             eEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcc
Confidence            999999665 88999999999999999999999999998874  8999999999999999999 6999999999999999


Q ss_pred             cCCccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccC
Q 009618          329 SGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHS  406 (530)
Q Consensus       329 ~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~~  406 (530)
                      +||.|++++|+|||++ ++|+|+++|.++++++++|     ++++||++++    ++.++++++..+ |+++++||....
T Consensus       238 ~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~  308 (442)
T cd07084         238 SGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELK  308 (442)
T ss_pred             cCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccc
Confidence            9999999999999999 9999999999999999998     7889999775    455666777777 599999997531


Q ss_pred             ------CCCceEeceEecCCCCCC---cccccccccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHh
Q 009618          407 ------LGMTFYEPTVLSNVKSEM---LVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE  475 (530)
Q Consensus       407 ------~~~~~~~Ptvl~~~~~~~---~~~~eE~FGPv~~i~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~  475 (530)
                            ..|+|++|||+.+++++|   ++++||+||||++|++|+|  ++|+|+++|+++|||++||||+|.++++++++
T Consensus       309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~  388 (442)
T cd07084         309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIG  388 (442)
T ss_pred             cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHH
Confidence                  137899999999999997   9999999999999999999  99999999999999999999999999999999


Q ss_pred             hc-cceEEEECCC-CC-CCCCCcccC-CCCCCCCCCC-hHHHHHhhheeeEE
Q 009618          476 AL-EYGLVGVNEG-LI-STEVAPFGG-VKQSGLGREG-SKYGMDEFLEIKYV  522 (530)
Q Consensus       476 ~l-~~G~v~vN~~-~~-~~~~~pfGG-~~~SG~G~~~-g~~~l~~~~~~k~v  522 (530)
                      ++ ++|+||||+. .. ..+..|||| .|.||+|+++ |.+++++||+...+
T Consensus       389 ~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         389 NLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             HHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence            99 9999999976 33 445577776 8899999995 99999999987643


No 113
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=7.1e-83  Score=616.81  Aligned_cols=458  Identities=30%  Similarity=0.500  Sum_probs=427.3

Q ss_pred             CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009618           68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK  147 (530)
Q Consensus        68 ~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~  147 (530)
                      +.++++.+.|.||+.++.++..++.|+++.+..|++|++.|.+.+...|.+.|+.+.+.+-+|+|.+++..++++||+.-
T Consensus        62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv  141 (583)
T KOG2454|consen   62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV  141 (583)
T ss_pred             CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHhCcccCCC---CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEe
Q 009618          148 EA-VGEVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV  223 (530)
Q Consensus       148 ~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~---~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl  223 (530)
                      +| .+||..+.+.+.|...+.++...+.....   .--...++.++|+||++.|.|||||+.+.+..+.+||.+||++|+
T Consensus       142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv  221 (583)
T KOG2454|consen  142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV  221 (583)
T ss_pred             hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence            77 58999999999998888777654432111   012346789999999999999999999999999999999999999


Q ss_pred             ecCCCcHHHHHHHH----HHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEee
Q 009618          224 KPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE  299 (530)
Q Consensus       224 Kps~~~~~~~~~l~----~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~le  299 (530)
                      |.|+.+.++.....    .+|+..|-|+++++++++ -++.+++|.+|+.|+.+.|.||..+++.|++.++++++|+.+|
T Consensus       222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-lpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lE  300 (583)
T KOG2454|consen  222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-LPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLE  300 (583)
T ss_pred             EeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-CcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEe
Confidence            99999998876544    456777999999999998 5688999999999999999999999999999999999999999


Q ss_pred             cCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHH
Q 009618          300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKA  379 (530)
Q Consensus       300 lgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~  379 (530)
                      ||||+++||++|||++..+.-++++.|..+||.|...+|++||.++||.|+..|..+++.++.|.|+...++||.|++.+
T Consensus       301 LGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~n  380 (583)
T KOG2454|consen  301 LGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQN  380 (583)
T ss_pred             ecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC
Q 009618          380 ALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN  455 (530)
Q Consensus       380 ~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~  455 (530)
                      +++.++.++++|+.+||+++.||.+..    +-|.|++||++.+++++|.+++||.||||++|+++++.|++|+++|+++
T Consensus       381 rfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~  460 (583)
T KOG2454|consen  381 RFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSR  460 (583)
T ss_pred             chHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCc
Confidence            999999999999999999999999754    3579999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          456 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       456 ~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      |||.++||+.|..+..+++++|++|+|.||+-.. ..-.+||||+|.||+||.+|.+||+..++.|+|++..
T Consensus       461 fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~  532 (583)
T KOG2454|consen  461 FGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDR  532 (583)
T ss_pred             ccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceeccc
Confidence            9999999999999999999999999999999654 4457999999999999999999999999999997763


No 114
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ  (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system.  This CD is limited to bacterial monofunctional enzymes.
Probab=100.00  E-value=1.1e-80  Score=666.33  Aligned_cols=446  Identities=22%  Similarity=0.252  Sum_probs=392.3

Q ss_pred             CCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 009618           67 YDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL  146 (530)
Q Consensus        67 ~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~  146 (530)
                      .+++..+++||.|++++++++.+   |++.++++|++|++.|+.+++.+|.++|++++++|++++++|++++++|+||++
T Consensus        62 ~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~  138 (549)
T cd07127          62 ASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAF  138 (549)
T ss_pred             CCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCH
Confidence            35788999999999999999987   999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH-----HHHHHHHHHHHHHHHHHHHhCcccCCCCCC------ceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          147 KEAVG-----EVDYGAKFIEFYAEEAKRVYGEIIPATLPD------RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       147 ~~a~~-----Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g------~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      .++..     |++.+++.++|++++..+..+...+....+      ......++|+||+++|+|||||+++.+.++++||
T Consensus       139 ~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~AL  218 (549)
T cd07127         139 MMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASL  218 (549)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHH
Confidence            88863     899999999999998877665432111011      1123478999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHH----HHHHHHHHcCCCCccEEeecCC-chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618          216 ACGCTVVVKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA  290 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~----~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a  290 (530)
                      ++||+||+|||+.+|+++.    .+.++|.++|+|+|++|+++++ +.++++.|+.||+|+.|.||||+.+|+.|++.++
T Consensus       219 aaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~  298 (549)
T cd07127         219 ATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR  298 (549)
T ss_pred             hcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc
Confidence            9999999999999998764    5668999999999999999975 4678999999999999999999999999999887


Q ss_pred             cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHhhccc
Q 009618          291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAVKNLK  361 (530)
Q Consensus       291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~  361 (530)
                        .+++++|+|||||+||++|||++.+++.+++++|.|+||.|++++|+|||++         +||+|+++|+++++++ 
T Consensus       299 --~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-  375 (549)
T cd07127         299 --QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-  375 (549)
T ss_pred             --cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-
Confidence              4799999999999999999999999999999999999999999999999999         8999999999999999 


Q ss_pred             cCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEE
Q 009618          362 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAP  437 (530)
Q Consensus       362 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~  437 (530)
                      +|+|.+..+++||++++++++++++    +++.|+ +++||....    .+++|++|||+..++++|.+++||+||||++
T Consensus       376 ~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~  450 (549)
T cd07127         376 LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAF  450 (549)
T ss_pred             cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEE
Confidence            9999999999999999999999864    455665 778876532    2334669999998889999999999999999


Q ss_pred             EEEeCCHHHHHHHHHcCC--C-CcEEEEEcCCHHHHHHHHhh-ccce-EEEECCCCCCCCCC--cccCCCCCCCCCC-Ch
Q 009618          438 LLCFKTEEEAIHMANDTN--A-GLAAYIFTNNLQRTWRVSEA-LEYG-LVGVNEGLISTEVA--PFGGVKQSGLGRE-GS  509 (530)
Q Consensus       438 i~~~~~~~eai~~~n~~~--~-gL~a~v~s~d~~~~~~~a~~-l~~G-~v~vN~~~~~~~~~--pfGG~~~SG~G~~-~g  509 (530)
                      |++|+|.||+|+++|++.  + ||+++|||+|.+.++++.++ .++| +++||.....-..+  ||||.+.||.... ++
T Consensus       451 V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~  530 (549)
T cd07127         451 VVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANA  530 (549)
T ss_pred             EEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCccccc
Confidence            999999999999999984  4 69999999999999999998 4555 99999433222334  5999999999988 66


Q ss_pred             HHHHHhhheeeEEE
Q 009618          510 KYGMDEFLEIKYVC  523 (530)
Q Consensus       510 ~~~l~~~~~~k~v~  523 (530)
                      .+..-.|...+--+
T Consensus       531 ~~~~~~fv~~r~~~  544 (549)
T cd07127         531 ALTDGAFVANRFRV  544 (549)
T ss_pred             ccchhhhhhcceEE
Confidence            67777777665433


No 115
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00  E-value=2e-82  Score=626.31  Aligned_cols=450  Identities=36%  Similarity=0.602  Sum_probs=421.5

Q ss_pred             ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618           55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus        55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      .+.||+|+|+.++++++++.+||.|+++|++++.++..|+++|+++|+.||+.  |++++..+|.+.+.++++++++|++
T Consensus       422 h~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~e  501 (881)
T KOG2452|consen  422 HQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQE  501 (881)
T ss_pred             HhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccc
Confidence            45699999999999999999999999999999999999999999999999984  9999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCC---CceeEEEEeeceEEEEECCCCcchHHHH
Q 009618          133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLP---DRRLFVLKQPVGVAGAITPWNFPLAMIT  208 (530)
Q Consensus       133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~---g~~~~~~~~P~GVv~~i~p~n~P~~~~~  208 (530)
                      +|+.+.+++.|.-+.-|. .-+...++.++||+++..++.|.++|....   .+-..+.++|+|||++|+|||||+.++.
T Consensus       502 elat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmls  581 (881)
T KOG2452|consen  502 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLS  581 (881)
T ss_pred             hhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHH
Confidence            999999999998777664 467778999999999999999998886542   3456789999999999999999999999


Q ss_pred             HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618          209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG  288 (530)
Q Consensus       209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~  288 (530)
                      |+.+++|++-                 ..++.+-    .|++|+++|.+.-+|..|..||+|++|-||||+++|+.||+.
T Consensus       582 wk~aaclaa~-----------------~~k~~e~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~s  640 (881)
T KOG2452|consen  582 WKTAACLAAQ-----------------VLKFAEL----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS  640 (881)
T ss_pred             HHHHHHHHHH-----------------Hhhhhhh----cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHH
Confidence            9999998531                 1222222    389999999998999999999999999999999999999999


Q ss_pred             Hhc-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618          289 AAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG  367 (530)
Q Consensus       289 ~a~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~  367 (530)
                      ++. ++|++++||||++|+|++.|||+++|+.....+.|++-|..|++..|+||..+|.|+|+.++.++++++++|+|+|
T Consensus       641 ca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pld  720 (881)
T KOG2452|consen  641 CAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLD  720 (881)
T ss_pred             HhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCccc
Confidence            985 6899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC--CHH
Q 009618          368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE  445 (530)
Q Consensus       368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~~  445 (530)
                      .+|+.||.-...+..++.++++.+++.||++.+||++.+..|.|++|||++++++.|.+.+||-||||+.|.+|+  |.|
T Consensus       721 r~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~  800 (881)
T KOG2452|consen  721 RDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLD  800 (881)
T ss_pred             ccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHH
Confidence            999999999999999999999999999999999999887668999999999999999999999999999999998  568


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      ++++.+|++++||+++|||+|..++.++++.|++|+|+||++.-.+...||||+|+||+|...|.++|.+|...|+|++.
T Consensus       801 ~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e  880 (881)
T KOG2452|consen  801 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE  880 (881)
T ss_pred             HHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence            99999999999999999999999999999999999999999998899999999999999999999999999999999874


No 116
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA.  This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium.  Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00  E-value=9e-81  Score=654.37  Aligned_cols=399  Identities=22%  Similarity=0.246  Sum_probs=351.6

Q ss_pred             HHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009618           91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV  170 (530)
Q Consensus        91 ~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~  170 (530)
                      -+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..++.      ++.++|+++..   
T Consensus         3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~---   73 (429)
T cd07121           3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKT---   73 (429)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhc---
Confidence            368999999999999999999999999999999999999999999999999999997763      44566665422   


Q ss_pred             hCcc-c-CC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH----HH
Q 009618          171 YGEI-I-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQ  242 (530)
Q Consensus       171 ~g~~-~-~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~  242 (530)
                      .+.. . +.  ..++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++    .+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~  153 (429)
T cd07121          74 PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE  153 (429)
T ss_pred             CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence            1211 1 11  112234578889999999999999999999999999999999999999999999999999877    47


Q ss_pred             cCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHH
Q 009618          243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL  322 (530)
Q Consensus       243 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~  322 (530)
                      +|+|+|++|++++++.+.++.|++||+|++|+||||+.+|+.|++.    .||+++|+|||||+||++|||+|.|++.++
T Consensus       154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~  229 (429)
T cd07121         154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIV  229 (429)
T ss_pred             cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHH
Confidence            8999999999998777889999999999999999999999999875    489999999999999999999999999999


Q ss_pred             HHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC--CCeEee
Q 009618          323 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK--GAKVLL  400 (530)
Q Consensus       323 ~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~--Ga~vl~  400 (530)
                      +++|.|+||.|++.+|+|||+++||+|+++|+++ .              .++++..+.+++.++++++.+.  |+++++
T Consensus       230 ~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~  294 (429)
T cd07121         230 QGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWV  294 (429)
T ss_pred             hcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCcccccccc
Confidence            9999999999999999999999999999999886 1              2478999999999999998864  799999


Q ss_pred             CCccc---CCCCceEe---ceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEEcCCHHHHHH
Q 009618          401 GGRRH---SLGMTFYE---PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWR  472 (530)
Q Consensus       401 gg~~~---~~~~~~~~---Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~~~~  472 (530)
                      ||...   ...|.|++   |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  +++|||+|.+++++
T Consensus       295 gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~  374 (429)
T cd07121         295 GKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTK  374 (429)
T ss_pred             CcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHH
Confidence            98641   11357776   599999999999999999999999999999999999999999999  99999999999999


Q ss_pred             HHhhccceEEEECCCCCCCCCCcccCCCCCCC--CCCChHHHHHhhheeeEEE
Q 009618          473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~--G~~~g~~~l~~~~~~k~v~  523 (530)
                      +++++++|+||||++..  +.+||||+|.|++  |.+-| +|+   +..|+++
T Consensus       375 ~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~  421 (429)
T cd07121         375 MARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFT  421 (429)
T ss_pred             HHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc---cChhhhh
Confidence            99999999999998754  6789999999999  55533 444   5555543


No 117
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00  E-value=1.6e-79  Score=644.69  Aligned_cols=408  Identities=18%  Similarity=0.218  Sum_probs=352.3

Q ss_pred             HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHh
Q 009618           94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAK--FIEFYAEEAKRVY  171 (530)
Q Consensus        94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~--~l~~~a~~~~~~~  171 (530)
                      ++.|+++|++||+.|+.+|+.+|.++|+++++.|++|+++|++++++|+|||+.+++.++..++.  ..++++..   ..
T Consensus         1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~---~~   77 (439)
T cd07081           1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE---KT   77 (439)
T ss_pred             CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence            46899999999999999999999999999999999999999999999999999999877665544  23443322   12


Q ss_pred             CcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH----HcCCCC
Q 009618          172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPP  247 (530)
Q Consensus       172 g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~----~aGlP~  247 (530)
                      +...+.. .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.    ++|+|+
T Consensus        78 ~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~  156 (439)
T cd07081          78 CGVLTGD-ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE  156 (439)
T ss_pred             CceecCC-CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence            2222321 13446889999999999999999999999999999999999999999999999988888775    789999


Q ss_pred             ccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhh
Q 009618          248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR  327 (530)
Q Consensus       248 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~  327 (530)
                      |++|+|++.+.+.++.|+.||+|++|+||||++    +++.+++++||+++|+|||||+||++|||+|.|++.+++++|.
T Consensus       157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~  232 (439)
T cd07081         157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF  232 (439)
T ss_pred             hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence            999999987778899999999999999999998    4666778899999999999999999999999999999999999


Q ss_pred             ccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-C
Q 009618          328 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-S  406 (530)
Q Consensus       328 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-~  406 (530)
                      |+||.|++.+|+|||+++||+|+++|.+++               ||+++.++.+++.++++++..+|++++.|+... .
T Consensus       233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~  297 (439)
T cd07081         233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIA  297 (439)
T ss_pred             CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHH
Confidence            999999999999999999999999999873               899999999999999999999999875443211 1


Q ss_pred             -CCCceEece---EecCCC--CCCcccccccccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEEcCC---HHHHHHH
Q 009618          407 -LGMTFYEPT---VLSNVK--SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNN---LQRTWRV  473 (530)
Q Consensus       407 -~~~~~~~Pt---vl~~~~--~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~----~~gL~a~v~s~d---~~~~~~~  473 (530)
                       ..|+|++||   ++.+++  ++|.+++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .++++++
T Consensus       298 ~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~  377 (439)
T cd07081         298 AAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQF  377 (439)
T ss_pred             HHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHH
Confidence             246899998   998888  999999999999999999999999999999975    799999999999   9999999


Q ss_pred             HhhccceEEEECCCC-CCC--CCCcccCCCCCCCC--CCChH-----HHHHhhheeeEEEE
Q 009618          474 SEALEYGLVGVNEGL-IST--EVAPFGGVKQSGLG--REGSK-----YGMDEFLEIKYVCL  524 (530)
Q Consensus       474 a~~l~~G~v~vN~~~-~~~--~~~pfGG~~~SG~G--~~~g~-----~~l~~~~~~k~v~~  524 (530)
                      ++++++|+||||.+. ...  ...-|||++.+-+|  ..||.     -+..+|++.|.|.+
T Consensus       378 a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (439)
T cd07081         378 ANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL  438 (439)
T ss_pred             HhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence            999999999999766 332  24567777654332  22221     25788999988764


No 118
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00  E-value=1.1e-78  Score=643.52  Aligned_cols=407  Identities=21%  Similarity=0.223  Sum_probs=356.7

Q ss_pred             CCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009618           88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA  167 (530)
Q Consensus        88 ~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~  167 (530)
                      ....+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.      ..++++++..
T Consensus        32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~  105 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKT  105 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHh
Confidence            3578999999999999999999999999999999999999999999999999999999988753      3345555443


Q ss_pred             HH---HhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH---
Q 009618          168 KR---VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL---  241 (530)
Q Consensus       168 ~~---~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~---  241 (530)
                      ..   ..+...  ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.   
T Consensus       106 ~~~~~~~~~~~--~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l  183 (465)
T PRK15398        106 PGVEDLTTEAL--TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAI  183 (465)
T ss_pred             ccccccccCcc--cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHH
Confidence            21   111111  1123456788899999999999999999999999999999999999999999999999998876   


Q ss_pred             -HcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHH
Q 009618          242 -QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNG  320 (530)
Q Consensus       242 -~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~  320 (530)
                       ++|+|+|++|++++.+.+.++.|++||+|++|+||||+++|+.|++    ..||+++|+|||||+||++|||+|.|++.
T Consensus       184 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~  259 (465)
T PRK15398        184 VAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARD  259 (465)
T ss_pred             HHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHH
Confidence             6999999999999866778899999999999999999999999998    36899999999999999999999999999


Q ss_pred             HHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEee
Q 009618          321 ALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL  400 (530)
Q Consensus       321 i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~  400 (530)
                      +++++|.|+||.|++++|||||+++||+|+++|+++.               +|++++.+++++.++++++..++++++.
T Consensus       260 i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~  324 (465)
T PRK15398        260 IVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWV  324 (465)
T ss_pred             HHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhh
Confidence            9999999999999999999999999999999999861               3789999999999999865445667787


Q ss_pred             CCccc---CCCCceE---eceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEEcCCHHHHHH
Q 009618          401 GGRRH---SLGMTFY---EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWR  472 (530)
Q Consensus       401 gg~~~---~~~~~~~---~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~~~~  472 (530)
                      ||...   ...|.|+   +|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  ++||||+|.+++++
T Consensus       325 g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~  404 (465)
T PRK15398        325 GKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNK  404 (465)
T ss_pred             CCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHH
Confidence            76431   1124555   4899999999999999999999999999999999999999999999  99999999999999


Q ss_pred             HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      +++++++|+||||++..  +.+||||+|.|.+-- +|+.| ...|..|+++.+
T Consensus       405 ~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~  453 (465)
T PRK15398        405 MARAIQTSIFVKNGPSY--AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRR  453 (465)
T ss_pred             HHHhCCceEEEECCCCc--cccCcCCCCCceeee-cccCC-CCccchhhhhhh
Confidence            99999999999998753  678999999998632 47777 888888887654


No 119
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl  5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00  E-value=1.3e-78  Score=635.29  Aligned_cols=382  Identities=20%  Similarity=0.224  Sum_probs=339.3

Q ss_pred             HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHH
Q 009618           96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EA--------VGEVDYGAKFIEFY  163 (530)
Q Consensus        96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~Ev~~~~~~l~~~  163 (530)
                      ..+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..    ++        ..|++.+++.++++
T Consensus         2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~   81 (406)
T cd07079           2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV   81 (406)
T ss_pred             hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999999999777666643    33        35999999999999


Q ss_pred             HHHHHHHhCcccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH
Q 009618          164 AEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL  241 (530)
Q Consensus       164 a~~~~~~~g~~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~  241 (530)
                      +...+ ..|...+..  ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++.
T Consensus        82 a~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~  158 (406)
T cd07079          82 AALPD-PVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ  158 (406)
T ss_pred             HhcCC-CCcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence            87654 334333321  1234568899999999999996 56 6788999999999999999999999999999998886


Q ss_pred             ----HcCCCCccEEeecCCch-hHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHH
Q 009618          242 ----QAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNV  316 (530)
Q Consensus       242 ----~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~  316 (530)
                          ++|+|+|++|++++.+. +.++.|+.||+|++|+||||+++|+.|++.+   ++|+++|||||||+||++|||+|.
T Consensus       159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~  235 (406)
T cd07079         159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM  235 (406)
T ss_pred             HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence                89999999999998544 6788899999999999999999999999876   699999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCC
Q 009618          317 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA  396 (530)
Q Consensus       317 a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga  396 (530)
                      |++.+++++|.|+| .|++++|||||+++||+|+++|++++++                                  .|+
T Consensus       236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga  280 (406)
T cd07079         236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGV  280 (406)
T ss_pred             HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCC
Confidence            99999999999999 9999999999999999999999998765                                  256


Q ss_pred             eEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhh
Q 009618          397 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA  476 (530)
Q Consensus       397 ~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~  476 (530)
                      +++.|+...    .|++||    ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++++
T Consensus       281 ~~~~g~~~~----~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~  352 (406)
T cd07079         281 ELRGDEETL----AILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLRE  352 (406)
T ss_pred             EEecCHHHH----Hhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHh
Confidence            655332211    478888    779999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceEEEECCCCCCCCCCcccCCCCCCC----CCCChHHHHHhhheeeEEEEec
Q 009618          477 LEYGLVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       477 l~~G~v~vN~~~~~~~~~pfGG~~~SG~----G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      +++|+||||++....+.+||||.|+||+    |+++|.+++++|++.|+|++++
T Consensus       353 ~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~~  406 (406)
T cd07079         353 VDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRGD  406 (406)
T ss_pred             CCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeCC
Confidence            9999999999877667789999999998    9999999999999999998874


No 120
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00  E-value=4.2e-78  Score=633.62  Aligned_cols=386  Identities=21%  Similarity=0.240  Sum_probs=342.7

Q ss_pred             HHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHH
Q 009618           92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAKF  159 (530)
Q Consensus        92 ~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~Ev~~~~~~  159 (530)
                      +|++.++++|++||+.|+.+|..+|.++|+++++.|++|+++|++++++|+||+..    +++        .|+..+++.
T Consensus         4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~   83 (417)
T PRK00197          4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG   83 (417)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999988877642    443        689999999


Q ss_pred             HHHHHHHHHHHhCcccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH
Q 009618          160 IEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA  237 (530)
Q Consensus       160 l~~~a~~~~~~~g~~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~  237 (530)
                      ++|++.++.. .+...+..  ..+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|+++..++
T Consensus        84 ~~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~  160 (417)
T PRK00197         84 LRQVAALPDP-VGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALV  160 (417)
T ss_pred             HHHHhhcCCC-ccccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence            9999977654 34433321  12346789999999999999986 4 678899999999999999999999999999988


Q ss_pred             HHH----HHcCCCCccEEeecCCc-hhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          238 ELA----LQAGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       238 ~~l----~~aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      +++    .++|+|+|++|+|++.+ .+.+..|..|++|++|+||||+.+|+.|++.+   +||+++|||||||+||++||
T Consensus       161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dA  237 (417)
T PRK00197        161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESA  237 (417)
T ss_pred             HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCC
Confidence            874    79999999999999644 45788888899999999999999999999865   69999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|.+++++++++                             
T Consensus       238 dl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------  287 (417)
T PRK00197        238 DLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE-----------------------------  287 (417)
T ss_pred             CHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-----------------------------
Confidence            999999999999999999 99999999999999999999999999988642                             


Q ss_pred             HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618          393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR  472 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~  472 (530)
                           ++ |+...  .+ |+ |||+   +++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus       288 -----~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~  354 (417)
T PRK00197        288 -----LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAER  354 (417)
T ss_pred             -----Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence                 11 11110  01 33 9998   4689999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceEEEECCCCCCCCCCcccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009618          473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      +++++++|+||||++....+..||||.|+||+|    |++|.+|+++|++.|+|++++
T Consensus       355 ~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~  412 (417)
T PRK00197        355 FLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD  412 (417)
T ss_pred             HHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence            999999999999998776778999999999999    999999999999999998865


No 121
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=3.1e-77  Score=583.68  Aligned_cols=423  Identities=31%  Similarity=0.478  Sum_probs=385.5

Q ss_pred             HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhC
Q 009618           94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYG  172 (530)
Q Consensus        94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g  172 (530)
                      +++.++.+|.+|.+-+..+.+.|.++|+++...+++|.++|.+++..+.+|+..++. .|+...+..++++.........
T Consensus         4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~   83 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK   83 (477)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence            455689999999999999999999999999999999999999999999999998885 5777777777777766655432


Q ss_pred             ccc-CC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCcc
Q 009618          173 EII-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV  249 (530)
Q Consensus       173 ~~~-~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gv  249 (530)
                      +.. +.  ...-.+.+++.+|+|||++|+|||||+.+.+..+++||+|||+||+|||+.+|.++..|++++-+. ++.++
T Consensus        84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~  162 (477)
T KOG2456|consen   84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL  162 (477)
T ss_pred             ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence            221 11  112356789999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             EEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhcc
Q 009618          250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS  329 (530)
Q Consensus       250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~  329 (530)
                      +.+|.| +.+....|+.+ +.|.|.||||+.+|+.||.+++++++|++||||||+|++|++|+|++-+++.|+++++.|+
T Consensus       163 ~~VV~G-gv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~  240 (477)
T KOG2456|consen  163 IRVVNG-GVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNS  240 (477)
T ss_pred             EEEecC-CCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccC
Confidence            999999 44444567766 8999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC
Q 009618          330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM  409 (530)
Q Consensus       330 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~  409 (530)
                      ||.|.+++.|+++.+++++++++++..++++ .|+-..++.+++.+|+..+++|+.+++++-    .+++.||..+. ..
T Consensus       241 GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~-~d  314 (477)
T KOG2456|consen  241 GQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE-SD  314 (477)
T ss_pred             CCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-hh
Confidence            9999999999999999999999999999998 577778899999999999999999998742    78999998764 34


Q ss_pred             ceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 009618          410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI  489 (530)
Q Consensus       410 ~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~  489 (530)
                      .|++|||+.+++++.++|+||+||||++|+.+.+.||+|+.+|+-+-.|++|+||+|.....++.+++.+|.|.+|+..+
T Consensus       315 ~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~  394 (477)
T KOG2456|consen  315 RYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIM  394 (477)
T ss_pred             cccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEE
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999765


Q ss_pred             --CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          490 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       490 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                        .-..+||||++.||+|+++|++|++.|+..|++..+
T Consensus       395 H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r  432 (477)
T KOG2456|consen  395 HVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR  432 (477)
T ss_pred             EEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence              346899999999999999999999999999998654


No 122
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00  E-value=1.4e-76  Score=654.20  Aligned_cols=382  Identities=20%  Similarity=0.209  Sum_probs=345.1

Q ss_pred             HHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CCHHHH----HHHHHHHHHH
Q 009618           92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLI------TLEQG--KPLKEA----VGEVDYGAKF  159 (530)
Q Consensus        92 ~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a----~~Ev~~~~~~  159 (530)
                      +++++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++      ++|+|  ||+.++    ..|+..+++.
T Consensus       294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~  373 (718)
T PLN02418        294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS  373 (718)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence            35999999999999999999999999999999999999999999996      77999  888877    4699999999


Q ss_pred             HHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH
Q 009618          160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA  237 (530)
Q Consensus       160 l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~  237 (530)
                      ++||++. .+..|...+.  ...+...++.++|+|||++|+||| |+.+. +++++||++||+||+|||+.||+++..|+
T Consensus       374 ~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~  450 (718)
T PLN02418        374 IRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH  450 (718)
T ss_pred             HHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence            9999987 4455554431  122444688999999999999999 99998 99999999999999999999999999999


Q ss_pred             HHHHHcCCCCcc----EEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618          238 ELALQAGIPPGV----VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD  313 (530)
Q Consensus       238 ~~l~~aGlP~gv----v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD  313 (530)
                      ++++++ +|+|+    +|+|++ +.+++..|+.||+|++|+||||+..   +++.++.++||+++|||||||+||++|||
T Consensus       451 ~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DAD  525 (718)
T PLN02418        451 KVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSAD  525 (718)
T ss_pred             HHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCC
Confidence            999999 99996    999997 5688999999999999999999964   45556667899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618          314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS  393 (530)
Q Consensus       314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~  393 (530)
                      +|.|++.+++++|.| ||.|++.+|+|||+++||+                        |         .+.++++++++
T Consensus       526 ld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~  571 (718)
T PLN02418        526 MDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVALRS  571 (718)
T ss_pred             HHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHHHHH
Confidence            999999999999999 9999999999999999997                        2         35889999999


Q ss_pred             CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618          394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV  473 (530)
Q Consensus       394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~  473 (530)
                      +||++ +||....  |      ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++.++
T Consensus       572 ~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~  640 (718)
T PLN02418        572 AGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIF  640 (718)
T ss_pred             CCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHH
Confidence            99999 6875531  3      233 3 7899999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceEEEECCCCCCCCCCcccCCCCCCC--CCCC--hHHHHHhhheeeEEEEec
Q 009618          474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREG--SKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~--G~~~--g~~~l~~~~~~k~v~~~~  526 (530)
                      ++++++|+||||++....+..||||+|+||+  ||++  |++||++|++.|+|++++
T Consensus       641 a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~  697 (718)
T PLN02418        641 LRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN  697 (718)
T ss_pred             HHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence            9999999999999877667789999999999  9885  999999999999998873


No 123
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00  E-value=1.2e-75  Score=623.90  Aligned_cols=414  Identities=18%  Similarity=0.211  Sum_probs=363.8

Q ss_pred             CCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Q 009618           88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEE  166 (530)
Q Consensus        88 ~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~  166 (530)
                      ..+.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+.+. +...+...+.+++..
T Consensus         4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~   83 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD   83 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence            3578899999999999999999999999999999999999999999999999999999988764 233455666555543


Q ss_pred             HHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHH----HHHHHH
Q 009618          167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA----AELALQ  242 (530)
Q Consensus       167 ~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l----~~~l~~  242 (530)
                      .+. .|. ... ..+...+..++|+|||++|+|||||+.+..+++++||++||+||+|||+.+|.++..+    .+++++
T Consensus        84 ~~~-~G~-~~~-~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e  160 (488)
T TIGR02518        84 MKT-IGI-LSE-DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE  160 (488)
T ss_pred             Ccc-cce-ecC-CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence            322 232 111 2355678899999999999999999999999999999999999999999999999974    455689


Q ss_pred             cCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHH
Q 009618          243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL  322 (530)
Q Consensus       243 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~  322 (530)
                      +|+|+|++|++++.+.+.++.|+.|++|++|+||||+.+++.    ++...||+++|+|||+|+||++|||+|.|++.++
T Consensus       161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv  236 (488)
T TIGR02518       161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYSSGTPAIGVGPGNGPAYIERTANVKKAVRDII  236 (488)
T ss_pred             cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence            999999999999877889999999999999999999996544    4456899999999999999999999999999999


Q ss_pred             HHHhhccCCccccCCeEEEehhhHHHHHHHHHHH-------hhccccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHHC
Q 009618          323 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA-------VKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSK  394 (530)
Q Consensus       323 ~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~-------~~~~~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~  394 (530)
                      +|+|+|+||.|++.+|+|||+++||+|+++|+++       .+.+++|+| +++++++||+++..+++++.++++.++.+
T Consensus       237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~  316 (488)
T TIGR02518       237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE  316 (488)
T ss_pred             HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence            9999999999999999999999999999999998       889999996 67899999999999999999999999999


Q ss_pred             CCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEEcCCHHHH
Q 009618          395 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTNNLQRT  470 (530)
Q Consensus       395 Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~----~~~gL~a~v~s~d~~~~  470 (530)
                      |+++++||..              .+++++++ ++|.||||++|++|+|+||||+++|+    ++|||+++|||+|.+++
T Consensus       317 gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a  381 (488)
T TIGR02518       317 DAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIV  381 (488)
T ss_pred             CCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHH
Confidence            9999999842              24567776 79999999999999999999999888    68999999999999999


Q ss_pred             HHHHhhccceEEEECCCCC------CCCCCc-----ccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          471 WRVSEALEYGLVGVNEGLI------STEVAP-----FGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       471 ~~~a~~l~~G~v~vN~~~~------~~~~~p-----fGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      +++++++++|+||||++..      +....|     ||+++.++++   .+-|++++++.|+|..+.
T Consensus       382 ~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~  445 (488)
T TIGR02518       382 REFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV  445 (488)
T ss_pred             HHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence            9999999999999997542      112344     7777766665   388999999999997764


No 124
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00  E-value=2.2e-76  Score=619.82  Aligned_cols=402  Identities=21%  Similarity=0.283  Sum_probs=352.2

Q ss_pred             HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHH-HHHHHHHHHHHHh
Q 009618           94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAK-FIEFYAEEAKRVY  171 (530)
Q Consensus        94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~-~l~~~a~~~~~~~  171 (530)
                      ++.++++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++ .++|++..  +..
T Consensus         1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~   78 (436)
T cd07122           1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV   78 (436)
T ss_pred             ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence            4689999999999999999999999999999999999999999999999999999986 8888887 78888853  333


Q ss_pred             CcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH----HHcCCCC
Q 009618          172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPP  247 (530)
Q Consensus       172 g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~  247 (530)
                      +...+  ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++    .++|+|+
T Consensus        79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~  156 (436)
T cd07122          79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE  156 (436)
T ss_pred             eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence            32211  12456788999999999999999999999999999999999999999999999999888776    4799999


Q ss_pred             ccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhh
Q 009618          248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR  327 (530)
Q Consensus       248 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~  327 (530)
                      |++|++++.+.+.++.|++||+|++|+||||+++++    .++++.+|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus       157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~  232 (436)
T cd07122         157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF  232 (436)
T ss_pred             hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence            999999987778899999999999999999999754    4566789999999999999999999999999999999999


Q ss_pred             ccCCccccCCeEEEehhhHHHHHHHHHHHhhcc-------ccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEe
Q 009618          328 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL  399 (530)
Q Consensus       328 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~-------~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl  399 (530)
                      |+||.|++++|+|||+++||+|+++|+++...+       ++|++ .+.++.+||+++..+.+++.+++..+..+|++++
T Consensus       233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl  312 (436)
T cd07122         233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL  312 (436)
T ss_pred             cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence            999999999999999999999999999999887       89999 4678889999999999888888777777777777


Q ss_pred             eCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEEcCCHHHHHHHHh
Q 009618          400 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNNLQRTWRVSE  475 (530)
Q Consensus       400 ~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~----~~gL~a~v~s~d~~~~~~~a~  475 (530)
                      +++              +.+++++|+++ +|.||||++|++|+|+||||+++|++    +|||++||||+|.++++++++
T Consensus       313 ~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~  377 (436)
T cd07122         313 VAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFAL  377 (436)
T ss_pred             EEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHh
Confidence            554              45778899987 56799999999999999999999997    899999999999999999999


Q ss_pred             hccceEEEECCCCCCCCCCcccCCCCC---------------CCCCCChHHHHHhhheeeEEEE
Q 009618          476 ALEYGLVGVNEGLISTEVAPFGGVKQS---------------GLGREGSKYGMDEFLEIKYVCL  524 (530)
Q Consensus       476 ~l~~G~v~vN~~~~~~~~~pfGG~~~S---------------G~G~~~g~~~l~~~~~~k~v~~  524 (530)
                      ++++|+||||++..      |||.|.+               |-+...+.-..++|+++|+|.+
T Consensus       378 ~l~aG~V~IN~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  435 (436)
T cd07122         378 RMPVSRILVNTPSS------LGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY  435 (436)
T ss_pred             hCCceEEEEeCCcc------ccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence            99999999998764      2222222               2222233457889999998854


No 125
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=2.9e-76  Score=561.47  Aligned_cols=466  Identities=33%  Similarity=0.538  Sum_probs=442.8

Q ss_pred             cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618           56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG  135 (530)
Q Consensus        56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  135 (530)
                      ....+|+|-.  +|...+.++|+++++|++|..++.+|.+.+++.|++|++.|-+.|...|.+|.+.++|.|+...+-|.
T Consensus        21 ~gvy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg   98 (507)
T KOG2453|consen   21 AGVYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLG   98 (507)
T ss_pred             cceeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence            3567789976  58999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618          136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL  215 (530)
Q Consensus       136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL  215 (530)
                      +++++|+||...+..+|+++.++.|+|..+..+.+.|..+|...++.-....|.|+|+|.+|+.+|||-...-|.-+.||
T Consensus        99 ~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaM  178 (507)
T KOG2453|consen   99 KLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM  178 (507)
T ss_pred             hhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             hcCCEEEeecCCCcHHHHHH----HHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618          216 ACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG  291 (530)
Q Consensus       216 aaGN~VVlKps~~~~~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~  291 (530)
                      .+||+|++||++.+|+++..    +.+.|.+--+|++.+....| +.+.++++..+.+++.+.||||+++++.+......
T Consensus       179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa  257 (507)
T KOG2453|consen  179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA  257 (507)
T ss_pred             hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH
Confidence            99999999999999998764    45667777899999999988 78999999999999999999999999999999988


Q ss_pred             ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618          292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV  371 (530)
Q Consensus       292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~  371 (530)
                      +..+..+||||||+.||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+...+++++|+|+|+.+.
T Consensus       258 rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl  337 (507)
T KOG2453|consen  258 RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTL  337 (507)
T ss_pred             HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCce
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618          372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA  451 (530)
Q Consensus       372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~  451 (530)
                      +||+.++....+.++-+++++++|+++++||+..+.+|+|++|||++ ..+|.++..+|.|.||++|.+|++++||+.+-
T Consensus       338 ~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ain  416 (507)
T KOG2453|consen  338 IGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAIN  416 (507)
T ss_pred             eccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheec
Confidence            99999999999999999999999999999999887678999999998 89999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618          452 NDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       452 n~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  525 (530)
                      |+.+.||++||||+|..++-++..-  -++|.|.||-++.++ ..-.|||.|..|-||+.|.++.++|++-.+.+++
T Consensus       417 nev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctin  493 (507)
T KOG2453|consen  417 NEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTIN  493 (507)
T ss_pred             cccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeee
Confidence            9999999999999999999999874  579999999988765 3678999999999999999999999998877765


No 126
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00  E-value=3.5e-73  Score=644.62  Aligned_cols=418  Identities=21%  Similarity=0.244  Sum_probs=366.2

Q ss_pred             EEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHH
Q 009618           85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY  163 (530)
Q Consensus        85 ~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~  163 (530)
                      .+...+.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++. ++..++..+.++
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~   84 (862)
T PRK13805          5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS   84 (862)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999999999999999999999999999875 444444555444


Q ss_pred             HHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH--
Q 009618          164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL--  241 (530)
Q Consensus       164 a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~--  241 (530)
                      .. ..+..|. .+ ..++...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.  
T Consensus        85 ~~-~~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~  161 (862)
T PRK13805         85 YK-DEKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA  161 (862)
T ss_pred             hc-CCCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence            32 1122222 11 1124557889999999999999999999999999999999999999999999999998888864  


Q ss_pred             --HcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHH
Q 009618          242 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVN  319 (530)
Q Consensus       242 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~  319 (530)
                        ++|+|+|++|++++.+.+.+..|++|++|++|+||||+.++    +.++.+++|+++|+|||||+||++|||++.|++
T Consensus       162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~  237 (862)
T PRK13805        162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN  237 (862)
T ss_pred             HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence              68999999999998777889999999999999999999964    455668999999999999999999999999999


Q ss_pred             HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeE-
Q 009618          320 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV-  398 (530)
Q Consensus       320 ~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v-  398 (530)
                      .+++++|+|+||.|++++|||||++++|+|+++|+++.               +|+++.+++++++++++++...|++. 
T Consensus       238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~  302 (862)
T PRK13805        238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNAD  302 (862)
T ss_pred             HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence            99999999999999999999999999999999998862               68999999999999999886665543 


Q ss_pred             eeCCcccC---CCCceEeceE------ecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEEcC
Q 009618          399 LLGGRRHS---LGMTFYEPTV------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTN  465 (530)
Q Consensus       399 l~gg~~~~---~~~~~~~Ptv------l~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~----~~~gL~a~v~s~  465 (530)
                      ++||....   ..|.|++||+      +.+++++|++++ |.||||++|++|+|+||||+++|+    ++|||+++|||+
T Consensus       303 ~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~  381 (862)
T PRK13805        303 IVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTN  381 (862)
T ss_pred             ccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence            45664311   2367889997      778899999887 799999999999999999999988    489999999999


Q ss_pred             CHHHHHHHHhhccceEEEECCCC----------CCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618          466 NLQRTWRVSEALEYGLVGVNEGL----------ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       466 d~~~~~~~a~~l~~G~v~vN~~~----------~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~  526 (530)
                      |.++++++++++++|+||||++.          ...+.+|||| |.||.|+.+|+.|+++|++.|+|..+.
T Consensus       382 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~  451 (862)
T PRK13805        382 DDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR  451 (862)
T ss_pred             CHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence            99999999999999999999876          3567899997 999999999999999999999997653


No 127
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00  E-value=1.3e-72  Score=553.75  Aligned_cols=469  Identities=25%  Similarity=0.367  Sum_probs=427.0

Q ss_pred             CCccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHH-
Q 009618           51 GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM-  128 (530)
Q Consensus        51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~-  128 (530)
                      ++...+..|+|+.+..  .......+|.+ ..+++.+..++.+++++||++|.+|++.|..+|..+|.+|+++.++++. 
T Consensus        56 ~~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlist  133 (561)
T KOG2455|consen   56 RPLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLIST  133 (561)
T ss_pred             CceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcc
Confidence            4567889999999985  45577889998 6688999999999999999999999999999999999999999999999 


Q ss_pred             HhHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeec-eEEEEECCCCcchHH
Q 009618          129 AHKEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAM  206 (530)
Q Consensus       129 ~~~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~  206 (530)
                      +++-+|....+.-.||...+|.-+ +.+.++++|+.+..+..+.........++.++...++|+ |-|++|+||||-...
T Consensus       134 kyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~  213 (561)
T KOG2455|consen  134 KYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIG  213 (561)
T ss_pred             hHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeec
Confidence            888899999999999999999655 678899999998888777654433335677788888887 999999999998766


Q ss_pred             HHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHH
Q 009618          207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM  286 (530)
Q Consensus       207 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~  286 (530)
                      .-...+||| +||+|++|||..+.++.+.+.++|+|||+|+|++|+||++++..++.+..+|++.++.||||+.+-+.+-
T Consensus       214 gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw  292 (561)
T KOG2455|consen  214 GNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW  292 (561)
T ss_pred             cccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence            666667777 7999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHhcc------cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcc
Q 009618          287 AGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL  360 (530)
Q Consensus       287 ~~~a~~------~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~  360 (530)
                      +..+.+      ..+++-|+||+|-.+|+++||++.++...++++|.++||.|++.+|+||++++++.+.++|.+.-+++
T Consensus       293 k~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~  372 (561)
T KOG2455|consen  293 KKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQL  372 (561)
T ss_pred             HHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhc
Confidence            887764      46899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEE
Q 009618          361 KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL  438 (530)
Q Consensus       361 ~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i  438 (530)
                      ++|+| .|.++.+||+|+...++|++++|+.|+. ....+++||..++..|+|++|||+..-+|.++++.||+||||++|
T Consensus       373 ~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsV  452 (561)
T KOG2455|consen  373 KIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSV  452 (561)
T ss_pred             ccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEE
Confidence            99998 7889999999999999999999999876 347899999998767899999999999999999999999999999


Q ss_pred             EEeCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCCCCC--CCcccCCCCCCCCCC-ChH
Q 009618          439 LCFKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLISTE--VAPFGGVKQSGLGRE-GSK  510 (530)
Q Consensus       439 ~~~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~~~~--~~pfGG~~~SG~G~~-~g~  510 (530)
                      +.|+|  ++|++.++ |.++||||.+||+.|.+.+.+..++|+  +|+.|||+-..++.  .+||||.+.||+... ||+
T Consensus       453 yvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp  532 (561)
T KOG2455|consen  453 YVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGP  532 (561)
T ss_pred             EEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCc
Confidence            99986  58999998 558999999999999999999999877  89999999777654  699999999999987 999


Q ss_pred             HHHHhhheeeEE
Q 009618          511 YGMDEFLEIKYV  522 (530)
Q Consensus       511 ~~l~~~~~~k~v  522 (530)
                      +.|-.|+...+|
T Consensus       533 ~~l~RwtSp~~i  544 (561)
T KOG2455|consen  533 HYLLRWTSPLSI  544 (561)
T ss_pred             eEEEeecCcchh
Confidence            999999988765


No 128
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase.  All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00  E-value=4.8e-72  Score=586.18  Aligned_cols=373  Identities=17%  Similarity=0.173  Sum_probs=339.0

Q ss_pred             HHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-----------HHHHHHHHHHHHHHHHH
Q 009618           99 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-----------GEVDYGAKFIEFYAEEA  167 (530)
Q Consensus        99 ~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-----------~Ev~~~~~~l~~~a~~~  167 (530)
                      ++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++.           .|+..+++.+++++...
T Consensus         1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~   80 (397)
T cd07077           1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV   80 (397)
T ss_pred             ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence            3688999999999999999999999999999999999999999999975543           48999999999998776


Q ss_pred             HHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHc---C
Q 009618          168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA---G  244 (530)
Q Consensus       168 ~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a---G  244 (530)
                      .+..+...+.   ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++..+++++.++   |
T Consensus        81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g  156 (397)
T cd07077          81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH  156 (397)
T ss_pred             CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence            5554433322   2357899999999999999999999 9999999999999999999999999999999999887   9


Q ss_pred             CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHH
Q 009618          245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA  324 (530)
Q Consensus       245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s  324 (530)
                      +|+++++++++.+.+.+..|+.|+++|+|+||||+++++.+++.+.  .+|+++|+||++|+||++|||++.|++.++++
T Consensus       157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~  234 (397)
T cd07077         157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDS  234 (397)
T ss_pred             CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence            9999999999867788999999999999999999999999988774  68999999999999999999999999999999


Q ss_pred             HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 009618          325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR  404 (530)
Q Consensus       325 ~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~  404 (530)
                      +|.| ||.|+++++||||+++||+|+++|.++++.                                  +|++++.||. 
T Consensus       235 ~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~-  278 (397)
T cd07077         235 KFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK-  278 (397)
T ss_pred             hccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-
Confidence            9999 999999999999999999999999998764                                  5777777763 


Q ss_pred             cCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH----HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccce
Q 009618          405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE----EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG  480 (530)
Q Consensus       405 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~----eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G  480 (530)
                          +.|+.||      ++|.+.+||+||||++|++|+|+|    +|++++|+++|||+++|||+|.+++.++++++++|
T Consensus       279 ----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G  348 (397)
T cd07077         279 ----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTA  348 (397)
T ss_pred             ----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEE
Confidence                3678886      788999999999999999999996    66678899999999999999999999999999999


Q ss_pred             EEEECCCCCCC--CCCcccCCC--CCCCCCCCh-HHHHHhhheeeEEE
Q 009618          481 LVGVNEGLIST--EVAPFGGVK--QSGLGREGS-KYGMDEFLEIKYVC  523 (530)
Q Consensus       481 ~v~vN~~~~~~--~~~pfGG~~--~SG~G~~~g-~~~l~~~~~~k~v~  523 (530)
                      +|+||+.....  ...||||+|  .||+|+++| .+++++|++.|+|+
T Consensus       349 ~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         349 SFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             EEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence            99999887654  678999999  899999999 99999999999985


No 129
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of  NAD(P)+-dependent enzymes, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00  E-value=1.7e-70  Score=570.46  Aligned_cols=364  Identities=52%  Similarity=0.829  Sum_probs=346.1

Q ss_pred             HHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC
Q 009618          100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL  179 (530)
Q Consensus       100 ~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~  179 (530)
                      +|++|++.|+.++.++|.++|+++++.|.++.++|++++++|+|||+.+++.|+..+++.++|++....+..+...+...
T Consensus         2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~   81 (367)
T cd06534           2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD   81 (367)
T ss_pred             hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence            57889999999999999999999999999999999999999999999999999999999999999988777654333334


Q ss_pred             CCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchh
Q 009618          180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPD  259 (530)
Q Consensus       180 ~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~  259 (530)
                      .+...+.+++|+|||++|.|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+
T Consensus        82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~  161 (367)
T cd06534          82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE  161 (367)
T ss_pred             CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence            46778999999999999999999999999999999999999999999999999999999999999999999999997767


Q ss_pred             HHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeE
Q 009618          260 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV  339 (530)
Q Consensus       260 ~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v  339 (530)
                      .++.|+.|++++.|+||||+++++.|.+.++++++|+++|+||+|++||++|||++.|++.++.++|.++||.|+++++|
T Consensus       162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v  241 (367)
T cd06534         162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL  241 (367)
T ss_pred             HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence            88999999999999999999999999999999899999999999999999999999999999999999999999999999


Q ss_pred             EEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecC
Q 009618          340 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN  419 (530)
Q Consensus       340 ~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~  419 (530)
                      |||++++|+|+++|+                                                            ||+.+
T Consensus       242 ~v~~~~~~~f~~~l~------------------------------------------------------------tl~~~  261 (367)
T cd06534         242 LVHESIYDEFVEKLV------------------------------------------------------------TVLVD  261 (367)
T ss_pred             EEcHHHHHHHHHhhc------------------------------------------------------------eeeeC
Confidence            999999999999988                                                            66677


Q ss_pred             CCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccC
Q 009618          420 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGG  498 (530)
Q Consensus       420 ~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG  498 (530)
                      +++++++++||+|||+++|++|++.||+|+++|++++||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||
T Consensus       262 ~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg  341 (367)
T cd06534         262 VDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGG  341 (367)
T ss_pred             CCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999999999999999999999999999999998876 78899999


Q ss_pred             CCCCCCCCCChHHHHHhhheeeEEE
Q 009618          499 VKQSGLGREGSKYGMDEFLEIKYVC  523 (530)
Q Consensus       499 ~~~SG~G~~~g~~~l~~~~~~k~v~  523 (530)
                      +|+||+|+++|++++++|++.|+|.
T Consensus       342 ~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         342 VKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             cccCccCCCChHHHHHHhceEEEEe
Confidence            9999999999999999999999874


No 130
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00  E-value=1.1e-70  Score=608.83  Aligned_cols=378  Identities=17%  Similarity=0.175  Sum_probs=331.7

Q ss_pred             HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH----------------HHHHH
Q 009618           93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG----------------EVDYG  156 (530)
Q Consensus        93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----------------Ev~~~  156 (530)
                      +++..+++|++||+.|+.++.++|.++|++++++|+++.++|+    .|+||++.+++.                |+..+
T Consensus       287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~  362 (715)
T TIGR01092       287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL  362 (715)
T ss_pred             HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence            4788899999999999999999999999999999999999996    588999987765                47888


Q ss_pred             HHHHHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHH
Q 009618          157 AKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL  234 (530)
Q Consensus       157 ~~~l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~  234 (530)
                      ++.++++++ ..+..|...+.  ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|+++.
T Consensus       363 ~~~l~~~a~-~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~  439 (715)
T TIGR01092       363 AISLRQLAA-MEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA  439 (715)
T ss_pred             HHHHHHHhc-CCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence            999999987 33333443321  112344678999999999999999 9998 689999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCc----cEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618          235 AAAELALQAGIPPG----VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD  310 (530)
Q Consensus       235 ~l~~~l~~aGlP~g----vv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~  310 (530)
                      .+++++.++ +|+|    ++++|++ +.+.++.|..|++|++|+||||+.+|+.|++.++   ||+++|+|||||+||++
T Consensus       440 ~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~  514 (715)
T TIGR01092       440 ILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK  514 (715)
T ss_pred             HHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC
Confidence            999999999 9987    6899985 5677888999999999999999999999998874   99999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHH
Q 009618          311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED  390 (530)
Q Consensus       311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~  390 (530)
                      |||++.|++.+..++|.+ ||.|+|++|||||+++||+                         |        .+.+++++
T Consensus       515 dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~  560 (715)
T TIGR01092       515 SASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDM  560 (715)
T ss_pred             CCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHH
Confidence            999999987777777655 9999999999999999985                         1        26677888


Q ss_pred             HHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHH
Q 009618          391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT  470 (530)
Q Consensus       391 a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~  470 (530)
                      +.++|++++ ||...  . .|+.     ..+++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus       561 ~~~~Ga~l~-Gg~~~--~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a  631 (715)
T TIGR01092       561 LRTEGVTIH-GGPRF--A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVA  631 (715)
T ss_pred             HHHCCCEEE-CCcch--h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHH
Confidence            888999985 77543  1 3442     1356899999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCC----CChHHHHHhhheeeEEEEe
Q 009618          471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR----EGSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       471 ~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~----~~g~~~l~~~~~~k~v~~~  525 (530)
                      +++++++++|.||||++....+..||||+|+||+|+    ++|++++++|++.|+|+++
T Consensus       632 ~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g  690 (715)
T TIGR01092       632 EFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRG  690 (715)
T ss_pred             HHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEEC
Confidence            999999999999999886666778999999999996    3899999999999999886


No 131
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00  E-value=1.1e-70  Score=570.98  Aligned_cols=375  Identities=19%  Similarity=0.154  Sum_probs=323.5

Q ss_pred             HHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHH
Q 009618          101 AFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPL------KEAVGEVDYGAKFIEFYAEEAK  168 (530)
Q Consensus       101 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~Ev~~~~~~l~~~a~~~~  168 (530)
                      |++||+.|+.++..+|.++|+++++.|++++++|+++      +++|+|||.      .++..|+..+++.++||++.+.
T Consensus         1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~   80 (398)
T TIGR00407         1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD   80 (398)
T ss_pred             ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999999999999      999999994      3467899999999999998886


Q ss_pred             HHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHH----HHH
Q 009618          169 RVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQ  242 (530)
Q Consensus       169 ~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~----l~~  242 (530)
                      . .|...+.  ..++...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|+++..++++    +.+
T Consensus        81 ~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e  157 (398)
T TIGR00407        81 P-VGKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ  157 (398)
T ss_pred             C-CcccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence            5 3554443  124567788999999999999997 6 67889999999999999999999999999999999    569


Q ss_pred             cCCCCccEEeecCCc-hhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHH
Q 009618          243 AGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGA  321 (530)
Q Consensus       243 aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i  321 (530)
                      +|+|+|++|+|++.+ .+.++.|..||+|++|+||||+.+++.+++..   .+|+++|+|||||+||++|||+|.|++.+
T Consensus       158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~~i  234 (398)
T TIGR00407       158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIKVI  234 (398)
T ss_pred             cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence            999999999999744 45788899999999999999999999988653   57999999999999999999999999999


Q ss_pred             HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeC
Q 009618          322 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG  401 (530)
Q Consensus       322 ~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~g  401 (530)
                      ++++|.+ ||.|++.+|+|||+++||+|+++|.++++++++        .+++      .+.+++++..    |      
T Consensus       235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g------  289 (398)
T TIGR00407       235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G------  289 (398)
T ss_pred             HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c------
Confidence            9999965 999999999999999999999999999997643        1222      1334444321    1      


Q ss_pred             CcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceE
Q 009618          402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL  481 (530)
Q Consensus       402 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~  481 (530)
                      |           ||++   ..+|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+
T Consensus       290 ~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~  355 (398)
T TIGR00407       290 P-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAA  355 (398)
T ss_pred             C-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeE
Confidence            1           3544   2337899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcccCCCCCC----CCCCChHHHHHhhheee
Q 009618          482 VGVNEGLISTEVAPFGGVKQSG----LGREGSKYGMDEFLEIK  520 (530)
Q Consensus       482 v~vN~~~~~~~~~pfGG~~~SG----~G~~~g~~~l~~~~~~k  520 (530)
                      ||||++...++..|||=-.+-|    ..-..|+.+++.||+.|
T Consensus       356 v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       356 VYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             EEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence            9999998877788998223322    33348999999999876


No 132
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde  substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=100.00  E-value=6.1e-34  Score=299.54  Aligned_cols=362  Identities=16%  Similarity=0.121  Sum_probs=264.8

Q ss_pred             CHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH--HH
Q 009618           90 GGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM----AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIE--FY  163 (530)
Q Consensus        90 ~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~--~~  163 (530)
                      +.++++..++..+...+....++.++..+++.++++.+.    ..+.+..+.+...+|.+.......+......|+  ..
T Consensus         3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l   82 (422)
T cd07080           3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL   82 (422)
T ss_pred             CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence            455666666666666666778888888888888888775    345566667777788886666555555555443  11


Q ss_pred             HHHHHHHhCc--ccCCCCC-CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH
Q 009618          164 AEEAKRVYGE--IIPATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA  240 (530)
Q Consensus       164 a~~~~~~~g~--~~~~~~~-g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l  240 (530)
                      ........+.  .+....+ +...++.++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..+.++|
T Consensus        83 ~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l  161 (422)
T cd07080          83 ERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSL  161 (422)
T ss_pred             HHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHH
Confidence            1111111121  1111122 455688999999999999999999 79999999999999999999999999999999999


Q ss_pred             HHcCCCC----ccEEee--cCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCcc-EEEecCC-
Q 009618          241 LQAGIPP----GVVNVV--MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP-CIVFDDA-  312 (530)
Q Consensus       241 ~~aGlP~----gvv~~v--~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~-~iV~~dA-  312 (530)
                      .++ +|+    +.++++  +|.+.++++.|+.++  |.|+||||+++++.|++.++.+  +.++|+|||++ +|+.+++ 
T Consensus       162 ~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~  236 (422)
T cd07080         162 ADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREAL  236 (422)
T ss_pred             Hhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhh
Confidence            999 787    888888  465556889999887  8999999999999999988855  46999999955 5555558 


Q ss_pred             ---CHHHHHHHHHHHHhhccCCccccCCeEEEehhh---HHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHH
Q 009618          313 ---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI---YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET  386 (530)
Q Consensus       313 ---D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~  386 (530)
                         |++.+++.+++++|.++||.|+|+++||||+++   +++|.++|.++++++.-..|..      ++ +.....++..
T Consensus       237 ~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~  309 (422)
T cd07080         237 ESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIAR  309 (422)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHH
Confidence               999999999999999999999999999999999   9999999999999876444421      21 4444455544


Q ss_pred             HHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009618          387 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN  466 (530)
Q Consensus       387 ~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d  466 (530)
                      .-..+...+.+....+.    .++    ||+....+.  +.. ...+=.+.|.++++.+|++..++.  +=.|.+++..+
T Consensus       310 ~r~~~~~~~~~~~~~~~----~~~----~v~~~~~~~--~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~  376 (422)
T cd07080         310 ARLEAEFYELKGGVSRD----LGW----TVIISDEIG--LEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSP  376 (422)
T ss_pred             HHHHHHHHHHhcCCCCC----CCe----EEEEeCCCC--ccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecCh
Confidence            44433333332221111    111    233222111  111 344457889999999999999985  77899999988


Q ss_pred             HHHHHHHHhhcc
Q 009618          467 LQRTWRVSEALE  478 (530)
Q Consensus       467 ~~~~~~~a~~l~  478 (530)
                      .+. .++++++.
T Consensus       377 ~~~-~~~~~~l~  387 (422)
T cd07080         377 AEL-AELADALA  387 (422)
T ss_pred             hhH-HHHHHHHH
Confidence            887 77777765


No 133
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00  E-value=3.2e-32  Score=269.70  Aligned_cols=387  Identities=19%  Similarity=0.226  Sum_probs=300.3

Q ss_pred             HHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH------HcCCCHHHHH------HHHHHHHHH
Q 009618           92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL------EQGKPLKEAV------GEVDYGAKF  159 (530)
Q Consensus        92 ~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a~------~Ev~~~~~~  159 (530)
                      .++.+..++|++|+.....++.++|.+.|.++++.|+++++++.+....      ++|.+.....      ..++..++.
T Consensus         3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g   82 (417)
T COG0014           3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG   82 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence            3567788899999999999999999999999999999999998886654      4454332221      234444444


Q ss_pred             HHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH
Q 009618          160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA  237 (530)
Q Consensus       160 l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~  237 (530)
                      ++..+...+.+ |.+...  ...|.+.+..+.|+||+++|  |..--..++...+.+|.+||+||+|.+..+..+...++
T Consensus        83 l~~Va~L~DPv-Gev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~  159 (417)
T COG0014          83 LRQVAALPDPV-GEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV  159 (417)
T ss_pred             HHHHhcCCCch-HhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence            44444333222 222222  12478888999999999999  66666677888899999999999999999999998887


Q ss_pred             HH----HHHcCCCCccEEeecCCchh-HHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618          238 EL----ALQAGIPPGVVNVVMGNAPD-IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA  312 (530)
Q Consensus       238 ~~----l~~aGlP~gvv~~v~g~~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA  312 (530)
                      ++    |.++|+|++.+|+++..+.+ +.+.|..+..||.|+-.||..--+.+.+.+   -.|++-..-|++.++|+++|
T Consensus       160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a---~vPVi~~~~G~CHiyvd~~A  236 (417)
T COG0014         160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA---TVPVIEHGVGNCHIYVDESA  236 (417)
T ss_pred             HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC---cCCEEecCcceEEEEecccC
Confidence            66    56789999999999875544 555555578899999999999877776655   35666555699999999999


Q ss_pred             CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618          313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV  392 (530)
Q Consensus       313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~  392 (530)
                      |+|.|.+-++.++...-+ .|.+.+.++||+.+.++|+..|.+.+....                               
T Consensus       237 Dld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~g-------------------------------  284 (417)
T COG0014         237 DLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAG-------------------------------  284 (417)
T ss_pred             CHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcC-------------------------------
Confidence            999999999999999876 999999999999999999999998876421                               


Q ss_pred             HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618          393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR  472 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~  472 (530)
                         -++........     +-|..  ..+....-+..|..-+++.|..+++.|+||+.+|..+.++|=+|.|+|...+++
T Consensus       285 ---velr~d~~~~~-----~~~~~--~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~  354 (417)
T COG0014         285 ---VELRGDAEALA-----LLPDA--VKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAER  354 (417)
T ss_pred             ---eEEEcCHHHHH-----hcccc--CCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHH
Confidence               11111110000     00000  012222345688999999999999999999999999999999999999999999


Q ss_pred             HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCC----ChHHHHHhhheeeEEEEec
Q 009618          473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLGD  526 (530)
Q Consensus       473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~----~g~~~l~~~~~~k~v~~~~  526 (530)
                      |.+.+++..||||..+.+....-||=--+-|+...    .|+-||+++|..|+|..+.
T Consensus       355 F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~  412 (417)
T COG0014         355 FVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD  412 (417)
T ss_pred             HHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence            99999999999999998888777764445555544    8999999999999998873


No 134
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=99.94  E-value=1.3e-24  Score=208.17  Aligned_cols=381  Identities=18%  Similarity=0.181  Sum_probs=287.9

Q ss_pred             HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHHH------HHHHHHHHHHH
Q 009618           94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPLKEAV------GEVDYGAKFIE  161 (530)
Q Consensus        94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a~------~Ev~~~~~~l~  161 (530)
                      +++..+.|++++..++.++.++|.++|.+++++|+.+..++...      .+.|+|.....-.      +.+.....-++
T Consensus         2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~   81 (433)
T KOG4165|consen    2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR   81 (433)
T ss_pred             HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence            35667889999999999999999999999999999877766553      3445664322211      23333333344


Q ss_pred             HHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHH
Q 009618          162 FYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL  239 (530)
Q Consensus       162 ~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~  239 (530)
                      ..++ .+...|.+...  -..|...+....|+||.++|  |......+..-...|+++||.+++|....+..+...|.++
T Consensus        82 ~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~  158 (433)
T KOG4165|consen   82 QIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL  158 (433)
T ss_pred             HHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence            4443 22333433221  12466677888999999999  6666666666677899999999999999999999888877


Q ss_pred             HHHc----CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHH
Q 009618          240 ALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLN  315 (530)
Q Consensus       240 l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~  315 (530)
                      ..++    |.|.+.+++|.. ..++.+.|-.+..||.|+-.||+.--+.|.....   .|+.-+-.|.+.++|++|||++
T Consensus       159 v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~  234 (433)
T KOG4165|consen  159 VQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLD  234 (433)
T ss_pred             HHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHH
Confidence            6655    779999999987 5678777777888999999999998888766542   6888888899999999999999


Q ss_pred             HHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC
Q 009618          316 VAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK  394 (530)
Q Consensus       316 ~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~  394 (530)
                      .|.+-+..++..+- -.|.+...+++|++. ...|.+.|...++                                  .+
T Consensus       235 kA~riv~DaK~dYP-AaCNAmETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~  279 (433)
T KOG4165|consen  235 KAKRIVRDAKCDYP-AACNAMETLLIHKDLEQSPFFDDLINMLK----------------------------------EE  279 (433)
T ss_pred             HHHHHHhcccCCCc-hhhhhHHHHhccHhhhhcchHHHHHHHHH----------------------------------hc
Confidence            99888888887765 489999999999973 2334333333222                                  23


Q ss_pred             CCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHH
Q 009618          395 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS  474 (530)
Q Consensus       395 Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a  474 (530)
                      |.++.+|.....         ++.--++...-++.|.-.-.++|-.+++.++||+.+|..+.++|-.|.|+|...+++|.
T Consensus       280 gVtl~agpkl~~---------~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl  350 (433)
T KOG4165|consen  280 GVTLHAGPKLAA---------LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFL  350 (433)
T ss_pred             CeEEecChhHHh---------hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHH
Confidence            444433332210         01111344455678887788999999999999999999999999999999999999999


Q ss_pred             hhccceEEEECCCCCCCCCCcccCCCCCCCCCC----ChHHHHHhhheeeEEEEe
Q 009618          475 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLG  525 (530)
Q Consensus       475 ~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~----~g~~~l~~~~~~k~v~~~  525 (530)
                      ..+++..|+.|..+.++...-||=--+-|+...    +||-|++-++.+|++..+
T Consensus       351 ~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG  405 (433)
T KOG4165|consen  351 KHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG  405 (433)
T ss_pred             hccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence            999999999999999888888875556665443    799999999999998665


No 135
>PF05893 LuxC:  Acyl-CoA reductase (LuxC);  InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.76  E-value=8e-15  Score=152.75  Aligned_cols=341  Identities=16%  Similarity=0.141  Sum_probs=218.3

Q ss_pred             cCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH--HHHHHHHHhCc--ccCCCCCCce
Q 009618          110 KLTAAERSKGLRKWYDLLMAH--KEELGQLITLEQGKPLKEAVGEVDYGAKFIEF--YAEEAKRVYGE--IIPATLPDRR  183 (530)
Q Consensus       110 ~~~~~~R~~iL~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~--~a~~~~~~~g~--~~~~~~~g~~  183 (530)
                      .+|.++..++|.++++.+...  .....+.+..-+|.+....+. ++....+|+.  .....+.-.+.  .+....+...
T Consensus         2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~   80 (399)
T PF05893_consen    2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD   80 (399)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence            456666677777777766642  222555566667777666654 4444433321  11111111122  1111122333


Q ss_pred             eEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCC----ccEEee--cCCc
Q 009618          184 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP----GVVNVV--MGNA  257 (530)
Q Consensus       184 ~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~----gvv~~v--~g~~  257 (530)
                      .+..+.|+|+++.|.|.|-|+.. ++.++.+|.+||..|+|+|+..+..+..|.+.|.+. .|.    ..+.++  ++.+
T Consensus        81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d  158 (399)
T PF05893_consen   81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD  158 (399)
T ss_pred             chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence            67789999999999999999954 566788999999999999999999999999999887 554    345566  4545


Q ss_pred             hhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-CCccEEEecCCCHHHHHHHHHHHHhhccCCccccC
Q 009618          258 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA  336 (530)
Q Consensus       258 ~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~  336 (530)
                      .++.+.+.+  ..|+|+.+||.++.+.+.+.+. ...+ .+..| -.+-.++..+++++.+++.+..-.+...+|.|+|+
T Consensus       159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~-~~~~-~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp  234 (399)
T PF05893_consen  159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLP-PGAR-LIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP  234 (399)
T ss_pred             hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC-CCCc-EeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence            677777774  4688999999999999988333 3233 44444 45667777788999999999999999999999999


Q ss_pred             CeEEEe---hhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHH-----HHHHCCCeEeeCCcccCCC
Q 009618          337 NRVLVQ---EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE-----DAVSKGAKVLLGGRRHSLG  408 (530)
Q Consensus       337 ~~v~V~---~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~-----~a~~~Ga~vl~gg~~~~~~  408 (530)
                      +.|||.   ..-.++|.++|.+++.+..---|..       ..+......+....+     .+...+.++..+....   
T Consensus       235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---  304 (399)
T PF05893_consen  235 QVIFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNS---  304 (399)
T ss_pred             eEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCC---
Confidence            999998   3446788888877776532111111       122222222322222     2344444454222111   


Q ss_pred             CceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhh
Q 009618          409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA  476 (530)
Q Consensus       409 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~  476 (530)
                           -||+....+  .. ....++=.+.|.++++.+|++..++....=.|.+++... .+...+++.
T Consensus       305 -----~~V~~~~~~--~~-~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~  363 (399)
T PF05893_consen  305 -----WTVIVSPEP--PL-LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARA  363 (399)
T ss_pred             -----EEEEECCCc--cc-ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHH
Confidence                 144433221  11 223345588999999999999999887332588887544 455555553


No 136
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=99.43  E-value=2.6e-13  Score=115.11  Aligned_cols=145  Identities=26%  Similarity=0.358  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH-HCCCeEeeCCcccCCCCceEeceEecCCCCCCc
Q 009618          347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEML  425 (530)
Q Consensus       347 d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~-~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~  425 (530)
                      ....+.|++..+.+++-+...++++.     .+..+++.++|+.-. ..|-....-|-   ..++|+.||+|. ++|+|.
T Consensus         9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~ms   79 (157)
T KOG2449|consen    9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNMS   79 (157)
T ss_pred             hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCcc
Confidence            44556778888889998888888886     566778888887511 11222222222   347899999999 999999


Q ss_pred             ccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCC
Q 009618          426 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVK  500 (530)
Q Consensus       426 ~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~  500 (530)
                      ++.||+||||+....-.++||+|..+|+.+||....|||.+.+.++.+....++|-+.+|.+... .+...|.|-+
T Consensus        80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~  155 (157)
T KOG2449|consen   80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR  155 (157)
T ss_pred             eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence            99999999999999999999999999999999999999999999999999999999999986542 2344455543


No 137
>PF07368 DUF1487:  Protein of unknown function (DUF1487);  InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=99.19  E-value=6e-10  Score=103.97  Aligned_cols=171  Identities=22%  Similarity=0.251  Sum_probs=129.1

Q ss_pred             ccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHH
Q 009618          304 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK  383 (530)
Q Consensus       304 ~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~  383 (530)
                      .-+||++|.|++.|+.-++.+.-.--|  ..+.-.|+|||++.|+|+++++.+++.+.      +..     -+...+.+
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~v-----a~Hpny~r   72 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQV-----ANHPNYLR   72 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hhh-----ccCcHHHH
Confidence            348999999999999999999865433  34667899999999999999999987653      222     23334555


Q ss_pred             HHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC--CCCcEEE
Q 009618          384 VETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT--NAGLAAY  461 (530)
Q Consensus       384 ~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~--~~gL~a~  461 (530)
                      -.+.++   .-+++++.++....  ..--.|.++.+.+.+.  +-. --.+|+++..|++..||+++++.-  +|+ +.+
T Consensus        73 sl~~i~---~l~~~~I~~~~~~~--~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs  143 (215)
T PF07368_consen   73 SLKKIK---CLNAKTIVADFENV--PPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVS  143 (215)
T ss_pred             HHHHHH---hcCCeEEEecccCC--CCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence            555554   47899988843321  1234688888766543  233 334799999999999999999974  455 999


Q ss_pred             EEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcc
Q 009618          462 IFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPF  496 (530)
Q Consensus       462 v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pf  496 (530)
                      ||++-.+.+-.++.+|++..+|||+... ..|..++
T Consensus       144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~  179 (215)
T PF07368_consen  144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPF  179 (215)
T ss_pred             EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhh
Confidence            9999999999999999999999999776 3444444


No 138
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.77  E-value=4.3e-08  Score=114.73  Aligned_cols=109  Identities=15%  Similarity=0.151  Sum_probs=86.9

Q ss_pred             cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeec
Q 009618          175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM  254 (530)
Q Consensus       175 ~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~  254 (530)
                      +|+.. |+.+..+..|+|+++||+|||   ..++.|++.||++||+||+||++.++.       .  -+.+|..+.+.+ 
T Consensus      1064 LPGPT-GEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~- 1129 (1208)
T PRK11905       1064 LPGPT-GESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI- 1129 (1208)
T ss_pred             CCCCC-CcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc-
Confidence            44443 899999999999999999999   568899999999999999999998762       1  122566555544 


Q ss_pred             CCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc---cceEEeecC
Q 009618          255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVSLELG  301 (530)
Q Consensus       255 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~---~~~~~lelg  301 (530)
                          .++..+..+++++.|.|+|++++.+.|.++++++   +.|++.|..
T Consensus      1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905       1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred             ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence                2334677888999999999999999999998876   456666664


No 139
>PF00815 Histidinol_dh:  Histidinol dehydrogenase;  InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=97.62  E-value=0.093  Score=54.64  Aligned_cols=258  Identities=23%  Similarity=0.264  Sum_probs=125.3

Q ss_pred             CCceeEEEEeeceEEEEECC-CCcchH-HHHHHHhhHhhcCCEEEe--ecCCCcHHHHHHHHHHHHHcCCCCccEEeecC
Q 009618          180 PDRRLFVLKQPVGVAGAITP-WNFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG  255 (530)
Q Consensus       180 ~g~~~~~~~~P~GVv~~i~p-~n~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g  255 (530)
                      +|.....++.|+--|++-.| ..+|+. +.+....||-.+|..=|+  -|+...-.....+.-.++.+|+.+ ++ -+ |
T Consensus        96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e-vy-~v-G  172 (412)
T PF00815_consen   96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE-VY-KV-G  172 (412)
T ss_dssp             TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE-EE-E---
T ss_pred             CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE-EE-ec-c
Confidence            46677788999999999998 344443 334567799999975443  444432233334455567788853 22 22 3


Q ss_pred             CchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-CCCccE--EEecCCCHHHHHHHHHHHHhhc
Q 009618          256 NAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPC--IVFDDADLNVAVNGALAAKFRN  328 (530)
Q Consensus       256 ~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-gG~~~~--iV~~dAD~~~a~~~i~~s~f~~  328 (530)
                       |.+.-.+|.-    -|.||+|+=.|..=+...=..-..    .+-+.+ -|.+=+  |-+++||.++.+.+++..+=..
T Consensus       173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd  247 (412)
T PF00815_consen  173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHD  247 (412)
T ss_dssp             -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred             -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence             4444444443    388999997777655322111111    222222 244433  3445789999999998877655


Q ss_pred             cCCccccCCeEEEe--hhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 009618          329 SGQTCVCANRVLVQ--EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS  406 (530)
Q Consensus       329 ~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~  406 (530)
                      ..     .+-++|.  +.+.++..+.+.+.+..+.               ..       +.++.++.             
T Consensus       248 ~~-----a~~vLvt~s~~la~~V~~~v~~~l~~l~---------------r~-------~i~~~sl~-------------  287 (412)
T PF00815_consen  248 PD-----AQAVLVTTSEELAEAVEAEVERQLEELP---------------RR-------EIAEKSLE-------------  287 (412)
T ss_dssp             TT------EEEEEES-HHHHHHHHHHHHHHHTT-T---------------TH-------HHHHHHHT-------------
T ss_pred             CC-----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------ch-------HHHHHHHH-------------
Confidence            43     2335553  3445555555555554431               11       11222221             


Q ss_pred             CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEEC
Q 009618          407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN  485 (530)
Q Consensus       407 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v~vN  485 (530)
                                               +|   .++.++|.+|+++++|..-.= -..|.++|..   .+..+++ +|.|++.
T Consensus       288 -------------------------~g---~ii~~~~l~ea~~~~N~~APE-HLel~~~~~~---~~~~~i~~AGaiFlG  335 (412)
T PF00815_consen  288 -------------------------NG---AIIVVDSLEEAIELANEYAPE-HLELQVEDPE---ELLEKIRNAGAIFLG  335 (412)
T ss_dssp             -------------------------T----EEEE-SSHHHHHHHHHHH--S-EEEEESTTHH---HHGGG--S-SEEEES
T ss_pred             -------------------------CC---eEEEECCHHHHHHHHHHhhHH-HHHHHHcCHH---HHHHHhhccChhhcC
Confidence                                     11   355679999999999985332 4567788874   5667765 8999999


Q ss_pred             CCCC---------CCCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          486 EGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       486 ~~~~---------~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                      .++.         .+..+|=     +|..|..|.-+...|++.-++
T Consensus       336 ~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~  376 (412)
T PF00815_consen  336 EYTPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISV  376 (412)
T ss_dssp             TT--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEE
T ss_pred             CCCCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeE
Confidence            8664         1234554     556777777788888876554


No 140
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=97.10  E-value=0.28  Score=50.85  Aligned_cols=256  Identities=21%  Similarity=0.259  Sum_probs=146.3

Q ss_pred             CCCCceeEEEEeeceEEEEECC---CCcchHHHHHHHhhHhhcCCEEE--eecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618          178 TLPDRRLFVLKQPVGVAGAITP---WNFPLAMITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNV  252 (530)
Q Consensus       178 ~~~g~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~VV--lKps~~~~~~~~~l~~~l~~aGlP~gvv~~  252 (530)
                      ..+|-....++.|+--|++-.|   .-||... +....||-.+|+.=|  .-|++..- ....+.-..+.+|+.+ ++. 
T Consensus       104 ~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStv-LM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-  179 (425)
T COG0141         104 TEPGVVLGQRWRPIERVGLYVPGGKAAYPSTV-LMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-  179 (425)
T ss_pred             ccCCcEEEEEEEEhhheEEEccCCCcCChHHH-HHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-
Confidence            3457778889999999999888   4555543 445679999998543  44555422 2233334456666653 222 


Q ss_pred             ecCCchhHHhHhhcC----CCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-CCccEE--EecCCCHHHHHHHHHHHH
Q 009618          253 VMGNAPDIGDALLTS----PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCI--VFDDADLNVAVNGALAAK  325 (530)
Q Consensus       253 v~g~~~~~~~~L~~~----~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G~~~~i--V~~dAD~~~a~~~i~~s~  325 (530)
                      + | |.+.-.+|.-.    +.||+|+=.|+.-+.-.  +..-.  ..+-..+- |.+=++  -+++||.++.+.+++.-+
T Consensus       180 v-G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~--g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQA  253 (425)
T COG0141         180 V-G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS--GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQA  253 (425)
T ss_pred             c-c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh--CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence            1 3 55555566655    88999987777654311  11100  11111111 443333  344589999999988776


Q ss_pred             hhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 009618          326 FRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR  403 (530)
Q Consensus       326 f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~  403 (530)
                      =..-     ..+.++|..  .+.++..+++.+.+..+.                +  .+...+-+.   .          
T Consensus       254 EHd~-----~a~aiLvT~s~~la~~v~~~v~~~l~~l~----------------~--~ei~~~~l~---~----------  297 (425)
T COG0141         254 EHDP-----DAQAILVTDSEELAEAVEAAVERQLETLP----------------R--AEIARKALE---N----------  297 (425)
T ss_pred             hcCC-----CceEEEEeCcHHHHHHHHHHHHHHHHhcc----------------H--HHHHHHHHH---h----------
Confidence            5542     244566644  334444444444444331                0  112221111   1          


Q ss_pred             ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEE
Q 009618          404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLV  482 (530)
Q Consensus       404 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v  482 (530)
                                                  ||   .|+..+|+||+++++|..-.= -.-|.++|..   .+..+++ +|.|
T Consensus       298 ----------------------------~g---~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGsI  342 (425)
T COG0141         298 ----------------------------YG---AIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGSI  342 (425)
T ss_pred             ----------------------------CC---eEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhccccee
Confidence                                        11   345669999999999985322 3456777765   4666665 8999


Q ss_pred             EECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhhee
Q 009618          483 GVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEI  519 (530)
Q Consensus       483 ~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~  519 (530)
                      +++.++..         +..+|     .+|+-|..|.-++..|++.
T Consensus       343 FlG~~sPe~~GDY~aG~NHVLP-----T~g~AR~~s~L~v~dF~K~  383 (425)
T COG0141         343 FLGHYSPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKR  383 (425)
T ss_pred             eecCCCCccccccccCCCccCC-----CCccchhcCCccHHHhhhH
Confidence            99986642         22445     4556666666677777653


No 141
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=96.99  E-value=0.0023  Score=75.90  Aligned_cols=100  Identities=15%  Similarity=0.123  Sum_probs=75.8

Q ss_pred             CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhH
Q 009618          181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDI  260 (530)
Q Consensus       181 g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~  260 (530)
                      |+.|..+..|+|+|+|+.+-.   ...+.+++++|++||.||+..++..   .    +++  +++|+.+.+.+.-.   .
T Consensus      1178 GE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~----~~~--~~Lp~~v~~~v~~~---~ 1242 (1318)
T PRK11809       1178 GERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---R----ALV--AALPAAVQARIQLA---K 1242 (1318)
T ss_pred             CCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---H----HHH--HhccHHHHhHhhhc---c
Confidence            899999999999999998733   3678999999999999988654432   1    122  46999888876331   1


Q ss_pred             HhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceE
Q 009618          261 GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV  296 (530)
Q Consensus       261 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~  296 (530)
                       ........++.|.|.|..+..+.+.++++++-.++
T Consensus      1243 -~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaI 1277 (1318)
T PRK11809       1243 -DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPI 1277 (1318)
T ss_pred             -ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCe
Confidence             22334467999999999999999999988775443


No 142
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=96.97  E-value=0.6  Score=48.42  Aligned_cols=286  Identities=20%  Similarity=0.232  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecC
Q 009618          151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPS  226 (530)
Q Consensus       151 ~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps  226 (530)
                      ..++.+.+.++.|......  ....-...+|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+  -|+
T Consensus        55 ~ai~~A~~nI~~fh~~q~~--~~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp  132 (390)
T cd06572          55 EAIELAAENIRAFHEAQLP--KDWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP  132 (390)
T ss_pred             HHHHHHHHHHHHHHHHhCC--CCeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence            3455556666655543221  11111122577778899999989888885 35554 334567899999986543  444


Q ss_pred             CCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-C
Q 009618          227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-G  301 (530)
Q Consensus       227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-g  301 (530)
                      ...-.....+.-..+.+|+.+ ++ -+ | |.+...+|.-    -|.||+|+=.|..-+...=.. ..   ..+-+.+ -
T Consensus       133 ~~~g~i~p~iL~aa~~~Gv~e-iy-~v-G-GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~-v~---g~V~ID~~A  204 (390)
T cd06572         133 RKDGKINPAILAAAKLAGVDE-IY-KV-G-GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRL-VS---GDVGIDMPA  204 (390)
T ss_pred             CCCCCCCHHHHHHHHHcCCcE-Ee-cc-C-CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHH-hc---CCcCccCCC
Confidence            321112222333456677754 12 12 3 4444444443    678999987776554321111 11   1122222 2


Q ss_pred             CCccEEE--ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCC
Q 009618          302 GNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN  377 (530)
Q Consensus       302 G~~~~iV--~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~  377 (530)
                      |.+=++|  +++||.++.+.+++..+=...    . .+.++|..  .+.++..+.+.+.++.+.               .
T Consensus       205 GPSEvlIiAD~~A~p~~vAaDLLaQAEH~~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r  264 (390)
T cd06572         205 GPSEVLVIADETANPEFVAADLLSQAEHDP----D-SQAILVTTSEELAEAVEEEVERQLAELP---------------R  264 (390)
T ss_pred             CCceEEEEeCCCCCHHHHHHHHHhhhccCC----C-CeEEEEECCHHHHHHHHHHHHHHHHhCC---------------c
Confidence            4444433  445899999999887765432    1 33455533  445555555555555441               0


Q ss_pred             HHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCC
Q 009618          378 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG  457 (530)
Q Consensus       378 ~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~g  457 (530)
                      .   +    .++.+..+                                     +   -.|+.++|.+|+++++|..-.=
T Consensus       265 ~---~----~~~~~~~~-------------------------------------~---g~ii~~~~~~eai~~~N~~APE  297 (390)
T cd06572         265 R---E----IAAKSLLD-------------------------------------Y---GAIILVDDLEEAIELANEYAPE  297 (390)
T ss_pred             H---H----HHHHHHHh-------------------------------------C---CEEEEECCHHHHHHHHHhhchh
Confidence            0   1    11111111                                     1   1245669999999999985322


Q ss_pred             cEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          458 LAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       458 L~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                       -.-|+++|...   +..+++ +|.|++..++..         +..+|-     +|..|..|..+...|++.-++
T Consensus       298 -HLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT-----~G~Ar~~sgL~v~~F~K~~s~  363 (390)
T cd06572         298 -HLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPT-----GGTARFYSGLSVDDFLKRITV  363 (390)
T ss_pred             -hheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCC-----CcceeecCCCCHHHheeccee
Confidence             34567778754   666665 899999876541         224554     456677666788888876544


No 143
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=96.68  E-value=1  Score=46.74  Aligned_cols=284  Identities=20%  Similarity=0.216  Sum_probs=161.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecCC
Q 009618          152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSE  227 (530)
Q Consensus       152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps~  227 (530)
                      -++.+.+.++.|......  ........+|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+  -|+.
T Consensus        52 ai~~A~~~I~~fh~~q~~--~~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~  129 (393)
T TIGR00069        52 ALELAAENIRAFHEAQLP--RSWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPG  129 (393)
T ss_pred             HHHHHHHHHHHHHHHhCC--CCeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCC
Confidence            455555666555433221  11111123567777889999999999996 33443 344567799999986543  4442


Q ss_pred             CcHHHHHHHHHHHHHcCCCCccEEeec-CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-
Q 009618          228 FTPLTALAAAELALQAGIPPGVVNVVM-GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-  301 (530)
Q Consensus       228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~-g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-  301 (530)
                      ..--....+.-..+.+|+.+    +.. | |.+.-.+|.-    -|.||+|+=.|..-+...  +..-  ...+-+.+- 
T Consensus       130 ~~g~i~p~iL~AA~~~Gv~e----Iy~vG-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~A  200 (393)
T TIGR00069       130 KDGKINPAVLAAAKLAGVDE----VYKVG-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLV--FGDVGIDMPA  200 (393)
T ss_pred             cCCCCCHHHHHHHHHcCCCe----ehhcC-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHh--cCccCcCCCC
Confidence            21012222333557787764    222 3 4444344433    468999987776654321  1110  012222222 


Q ss_pred             CCccEEE--ecCCCHHHHHHHHHHHHhhccCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCC
Q 009618          302 GNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN  377 (530)
Q Consensus       302 G~~~~iV--~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~  377 (530)
                      |.+=++|  +++||.++.+.+++..+=....     .+.++|  .+++.++..+.+.+.+..+.                
T Consensus       201 GPSEvlViAD~~Anp~~iAaDLLaQAEHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------  259 (393)
T TIGR00069       201 GPSEVLVIADETANPEFVAADLLSQAEHDPD-----AQAILVTTSEELAEAVQEEIERQLATLP----------------  259 (393)
T ss_pred             CCceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------
Confidence            5444444  4458999999998877655432     344555  44555666666666655541                


Q ss_pred             HHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCC
Q 009618          378 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG  457 (530)
Q Consensus       378 ~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~g  457 (530)
                        ..    +..++++..                                     +|   .|+.++|.||+++++|..-.=
T Consensus       260 --r~----~i~~~al~~-------------------------------------~g---~ii~v~~l~ea~~~~N~~APE  293 (393)
T TIGR00069       260 --RR----EIARKSLED-------------------------------------NG---AIILVDDLEEAIEISNDYAPE  293 (393)
T ss_pred             --hH----HHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhhChH
Confidence              01    122222221                                     11   234668999999999985322


Q ss_pred             cEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          458 LAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       458 L~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                       -.-|+++|..   .+..+++ +|.|++..++..         +..+|     .+|..|..|.-+...|++.-++
T Consensus       294 -HLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLP-----T~G~Ar~~sgL~v~~F~K~~s~  359 (393)
T TIGR00069       294 -HLELQTKNPE---ELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLP-----TGGTARFYSGLSVLDFLKRITV  359 (393)
T ss_pred             -hheehhCCHH---HHHhhcCccceeccCCCCchhhhhccCCCCcccC-----CCcceeecCCccHHHhccceeE
Confidence             2346777774   4666665 899999776541         12344     4567777777788889876554


No 144
>PRK13770 histidinol dehydrogenase; Provisional
Probab=96.56  E-value=1.2  Score=46.37  Aligned_cols=258  Identities=19%  Similarity=0.205  Sum_probs=149.2

Q ss_pred             CCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecCCCcHHHHHHHHHHHHHcCCCCccEEeecC
Q 009618          180 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG  255 (530)
Q Consensus       180 ~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g  255 (530)
                      +|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+  -|++... ....+.-..+.+|+.+  +--+ |
T Consensus       100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e--Iy~i-G  175 (416)
T PRK13770        100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ--VFQV-G  175 (416)
T ss_pred             CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe--eecc-C
Confidence            456667788999999999884 44543 334567899999986554  3433211 2222333457777764  2222 3


Q ss_pred             CchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-CCCccEEE--ecCCCHHHHHHHHHHHHhhc
Q 009618          256 NAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPCIV--FDDADLNVAVNGALAAKFRN  328 (530)
Q Consensus       256 ~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-gG~~~~iV--~~dAD~~~a~~~i~~s~f~~  328 (530)
                       |.+.-.+|.-    -|.||+|+=.|..=+...  +..-  ...+-+.+ -|.+=+.|  +++||.++.+.+++..+=..
T Consensus       176 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd  250 (416)
T PRK13770        176 -GAQSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYL--FGQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHD  250 (416)
T ss_pred             -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHh--cCCcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhccC
Confidence             4443344433    568999987776654321  1100  11222222 14444443  44589999999988776554


Q ss_pred             cCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 009618          329 SGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS  406 (530)
Q Consensus       329 ~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~  406 (530)
                      ..     .+.++|  .+.+.++..+.+.+.+..+.               .   .    +.+++++..            
T Consensus       251 ~~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~i~~~al~~------------  291 (416)
T PRK13770        251 EL-----ARTYVISEDAQVLKDLESRIAKALPNVD---------------R---Y----DIVSKSIAN------------  291 (416)
T ss_pred             CC-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh------------
Confidence            32     344555  44555666666666655541               0   1    122222211            


Q ss_pred             CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEEC
Q 009618          407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN  485 (530)
Q Consensus       407 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v~vN  485 (530)
                                               +|   .|+.++|.||+++++|..-.= -.-|.++|..   .+..+++ +|.|++.
T Consensus       292 -------------------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG  339 (416)
T PRK13770        292 -------------------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALFIG  339 (416)
T ss_pred             -------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceeccC
Confidence                                     11   245669999999999985322 2347778874   5666666 8999997


Q ss_pred             CCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          486 EGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       486 ~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                      .++..         +..+|     .+|..|..|.-+...|++.-++
T Consensus       340 ~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~  380 (416)
T PRK13770        340 HYSPEVIGDYVAGPSHVLP-----TNRTARFTNGLSVNDFLTRNTV  380 (416)
T ss_pred             CCCchhhhccccCCCCcCC-----CCcceeccCCCcHHHeecceee
Confidence            76541         12344     4566777666788888876544


No 145
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=96.48  E-value=1.4  Score=46.13  Aligned_cols=286  Identities=19%  Similarity=0.221  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecC
Q 009618          151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPS  226 (530)
Q Consensus       151 ~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps  226 (530)
                      .-+..+.+.++.|......-.........+|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+  -|+
T Consensus        76 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp  155 (426)
T PRK12447         76 EDIRFAQDQVRRFAEAQRDSLQDLEVETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPP  155 (426)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCceEEecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence            34555556665555332110000110123466677789999999999884 44553 334567899999986543  444


Q ss_pred             CCcHHHHHHHHHHHHHcCCCCccEEeec-CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-
Q 009618          227 EFTPLTALAAAELALQAGIPPGVVNVVM-GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-  300 (530)
Q Consensus       227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~-g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-  300 (530)
                      .........| -..+.+|+.+    +.. | |.+.-.+|.-    -|.||+|+=.|..-+...  +..-  ...+-+.+ 
T Consensus       156 ~~~~i~p~iL-~Aa~~~Gv~e----Iy~vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~  225 (426)
T PRK12447        156 FPGEPPPAIV-AAMHLAGADE----IYVLG-GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA--KRQL--FGRVGIDLF  225 (426)
T ss_pred             CCCCCCHHHH-HHHHHcCCCe----ehhcC-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHh--cCccCcCCC
Confidence            3211222223 3457777764    222 3 4443344433    568999987776654321  1110  11222222 


Q ss_pred             CCCccEEE--ecCCCHHHHHHHHHHHHhhccCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccC
Q 009618          301 GGNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI  376 (530)
Q Consensus       301 gG~~~~iV--~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli  376 (530)
                      -|.+=+.|  +++||.++.+.+++..+=....     .+.++|  .+.+.++..+.+.+.++.+.               
T Consensus       226 AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------  285 (426)
T PRK12447        226 AGPTETLVIADDTADPELVATDLLGQAEHGPN-----SPAVLITTSRKLAEEVLAEIERLLAILP---------------  285 (426)
T ss_pred             CCCceeEEEeCCCCCHHHHHHHHHHHhccCCC-----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------
Confidence            25444444  3458999999998877755432     334555  34555565555555555441               


Q ss_pred             CHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCC
Q 009618          377 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA  456 (530)
Q Consensus       377 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~  456 (530)
                       +  .    +.+++++.+                                     +|   .|+.++|.||+++++|..-.
T Consensus       286 -r--~----~i~~~sl~~-------------------------------------~g---~ii~v~~l~ea~~~~N~~AP  318 (426)
T PRK12447        286 -T--A----DVASAAWRD-------------------------------------YG---EVILCDDLEEMVAEADRYAS  318 (426)
T ss_pred             -H--H----HHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhhCh
Confidence             1  1    122222211                                     11   23456899999999999533


Q ss_pred             CcEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          457 GLAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       457 gL~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                      = -.-|.++|.   +.+..+++ +|.|++..++..         +..+|     .+|..|..|.-+.+.|++.-++
T Consensus       319 E-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~Ar~~sgLsv~~FlK~~s~  385 (426)
T PRK12447        319 E-HVQVMTEDP---DWFLENMTNYGALFLGERTNVAYGDKVIGTNHVLP-----TSGAARYTGGLWVGKFLKTVTY  385 (426)
T ss_pred             H-heeehhCCH---HHHHhhcCccceeccCCCCchhhhhcccCCCcccC-----CCcceeecCCCcHHHhccceeE
Confidence            2 234777887   45666665 899999765541         12344     4667788777788889876544


No 146
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=96.16  E-value=2.1  Score=44.88  Aligned_cols=259  Identities=22%  Similarity=0.255  Sum_probs=149.9

Q ss_pred             CCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecCCCcHHHHHHHHHHHHHcCCCCccEEeec
Q 009618          179 LPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM  254 (530)
Q Consensus       179 ~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~  254 (530)
                      .+|...-..+.|+--|++-.|. .+|+. +.+....||-.+|..=|+  -|+.... ....+.-.++.+|+.+  +--+ 
T Consensus       109 ~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e--Iy~v-  184 (425)
T PRK00877        109 APGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE--VYKV-  184 (425)
T ss_pred             cCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe--eecc-
Confidence            3466677788999999999996 33433 344567899999986543  4443111 2223333557777764  2222 


Q ss_pred             CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-CCCccEEEe--cCCCHHHHHHHHHHHHhh
Q 009618          255 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPCIVF--DDADLNVAVNGALAAKFR  327 (530)
Q Consensus       255 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-gG~~~~iV~--~dAD~~~a~~~i~~s~f~  327 (530)
                      | |.+.-.+|.-    -|.||+|+=.|..=|...  +..-  ...+-..+ -|.+=++|.  ++||.++.+.+++..+=.
T Consensus       185 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH  259 (425)
T PRK00877        185 G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTAA--KRLV--FGVVGIDMIAGPSEILVIADETADPDFVAADLLSQAEH  259 (425)
T ss_pred             C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHH--cCCcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence            3 4444445543    468999987776654321  1110  01222222 244444443  458999999999887755


Q ss_pred             ccCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 009618          328 NSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH  405 (530)
Q Consensus       328 ~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~  405 (530)
                      ...     .+.++|  .+.+.++..+.+.+.+..+.                +  .    ...++++..           
T Consensus       260 d~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~ia~~sl~~-----------  301 (425)
T PRK00877        260 DPD-----AQSILVTTSEELAEAVAAEVERQLATLP----------------R--A----EIARASLEG-----------  301 (425)
T ss_pred             CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh-----------
Confidence            432     344555  33445555555555554431                0  1    122222211           


Q ss_pred             CCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEE
Q 009618          406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV  484 (530)
Q Consensus       406 ~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v~v  484 (530)
                                                +|   .|+.++|.||+++++|..-.= -.-|.++|..   .+..+++ +|.|++
T Consensus       302 --------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFl  348 (425)
T PRK00877        302 --------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAIFL  348 (425)
T ss_pred             --------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceecc
Confidence                                      11   245669999999999985322 2447778874   4566665 899999


Q ss_pred             CCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          485 NEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       485 N~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                      ..++..         +..+|     .+|..|..|.-+...|++.-++
T Consensus       349 G~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~F~K~~s~  390 (425)
T PRK00877        349 GPYTPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKRSSV  390 (425)
T ss_pred             CCCCchhhhhcccCCCcccC-----CCcceeecCCccHHHhccceeE
Confidence            776541         12334     4667788777899999876544


No 147
>PRK13769 histidinol dehydrogenase; Provisional
Probab=95.64  E-value=3.2  Score=42.74  Aligned_cols=272  Identities=18%  Similarity=0.105  Sum_probs=152.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcH
Q 009618          151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP  230 (530)
Q Consensus       151 ~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~  230 (530)
                      ..+..+.+.++.|........ ...  ..+|.....++.|+--|++-.|.-||. +.+....||-.+|+.=|+-.+|-..
T Consensus        57 ~ai~~a~~~I~~fh~~q~~~~-~~~--~~~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~  132 (368)
T PRK13769         57 AAALEAAKSLEALYSRLKPPE-AVD--FYGGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRG  132 (368)
T ss_pred             HHHHHHHHHHHHHHHHhCCCC-eEe--cCCCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCC
Confidence            345555666665554332211 111  235777778899999999999965553 4456678999999865543332111


Q ss_pred             HHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-CCc-cEEE
Q 009618          231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNA-PCIV  308 (530)
Q Consensus       231 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G~~-~~iV  308 (530)
                       ..-.+.-.++.+|+.+  +--+ | |.+.-.++...-+||+|+=.|..-+...=.. ..   ..+-..+- |.+ -+|+
T Consensus       133 -i~p~vL~aa~~~Gv~e--Iy~v-G-GAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~-v~---g~V~ID~~AGPSEvlVi  203 (368)
T PRK13769        133 -VTGELLAVAKELGVKG--VLAI-G-GPHGLAYAVFHMGVDMVAGPGGLYVQAAKYV-LS---QYVGIDGIEGPTELVVY  203 (368)
T ss_pred             -CCHHHHHHHHHcCCCe--eecc-c-CHHHHHHHhcCCCcCEEECCCcHHHHHHHHH-Hh---CCcCCCCcCCCcceEEE
Confidence             2222333557777764  2222 4 4444346666558999987777655322111 11   12222221 333 3555


Q ss_pred             ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618          309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV  388 (530)
Q Consensus       309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i  388 (530)
                      -++||.++.+.+++..+=...     ..+.++|..+  .++.++..+++++.                           +
T Consensus       204 AD~a~p~~vAaDLLaQAEH~~-----~a~~iLvT~s--~~la~~V~~~v~~~---------------------------~  249 (368)
T PRK13769        204 AEGVPPEVAVRGALAQLEHGP-----TSFAYLLSTD--AELLKAAEEIYRRE---------------------------R  249 (368)
T ss_pred             cCCCCHHHHHHHHHHHhhcCC-----CCcEEEEECC--HHHHHHHHHHHHHH---------------------------H
Confidence            556899999888877665432     2344555444  34444444443320                           1


Q ss_pred             HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC-CCcEEEEEcCCH
Q 009618          389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN-AGLAAYIFTNNL  467 (530)
Q Consensus       389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~-~gL~a~v~s~d~  467 (530)
                      ..     .        .  + .                         ..|+.++|.||+++++|..- -.|...  +.  
T Consensus       250 ~~-----~--------~--~-~-------------------------~~iivv~~leeai~~~N~~APEHLel~--~~--  284 (368)
T PRK13769        250 TS-----S--------M--G-P-------------------------LEVRKVAGVEEAVRFIDEIAPEHLEVW--GR--  284 (368)
T ss_pred             Hh-----c--------C--C-C-------------------------CeEEEECCHHHHHHHHHhhChHheEee--Cc--
Confidence            00     0        0  0 0                         24677899999999999953 334443  32  


Q ss_pred             HHHHHHHhhcc-ceEEEECCCCCC-------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          468 QRTWRVSEALE-YGLVGVNEGLIS-------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       468 ~~~~~~a~~l~-~G~v~vN~~~~~-------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                         +.+..+++ +|.|+++++...       +..+|     .+|..|..|.-+...|++.-++
T Consensus       285 ---~~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~t~  339 (368)
T PRK13769        285 ---REVAYRVRNVGAVSVNMPSPYLDYVAGISHVLP-----TGGTARWRGIITPLTFMKPIGV  339 (368)
T ss_pred             ---HHHHhhCCccCChhcCCchhhhccccCCCCcCC-----CCcceeccCCCcHHHcccceeE
Confidence               22555665 899999664331       12344     4567777776788888775544


No 148
>PLN02926 histidinol dehydrogenase
Probab=95.61  E-value=3.6  Score=43.23  Aligned_cols=257  Identities=20%  Similarity=0.236  Sum_probs=148.3

Q ss_pred             CCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEE--eecCCCcHHHHHHHHHHHHHcCCCCccEEeec-
Q 009618          180 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVM-  254 (530)
Q Consensus       180 ~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VV--lKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~-  254 (530)
                      +|.....++.|+.-|++-.|. .+|+. +.+....||-.+|+.=|  .-|+...-.....+.-..+.+|+.+    +.. 
T Consensus       110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e----Iy~v  185 (431)
T PLN02926        110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCAKKAGVTH----ILKA  185 (431)
T ss_pred             CCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHHHHHHcCCCe----eecc
Confidence            566777889999999999996 33432 34456789999998644  3444321012222233557787764    222 


Q ss_pred             CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccce---EEeec-CCCccEEEe--cCCCHHHHHHHHHHH
Q 009618          255 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKK---VSLEL-GGNAPCIVF--DDADLNVAVNGALAA  324 (530)
Q Consensus       255 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~---~~lel-gG~~~~iV~--~dAD~~~a~~~i~~s  324 (530)
                      | |.+.-.+|.-    -|+||+|+=.|..=+...=.. ..   ..   +-..+ -|.+=++|.  ++||.++++.+++..
T Consensus       186 G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v~---G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQ  260 (431)
T PLN02926        186 G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMI-LQ---NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQ  260 (431)
T ss_pred             C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHH-hh---CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence            3 4444344443    468999987777654321111 11   11   22222 254444444  458999999998887


Q ss_pred             HhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCC
Q 009618          325 KFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG  402 (530)
Q Consensus       325 ~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg  402 (530)
                      +=....     .+.++|..  .+.++..+.+.+.++.+.                +      .+..++++..        
T Consensus       261 AEHdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~--------  305 (431)
T PLN02926        261 AEHGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH--------  305 (431)
T ss_pred             hccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC--------
Confidence            755432     33455533  444555555555444431                0      1112222111        


Q ss_pred             cccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceE
Q 009618          403 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGL  481 (530)
Q Consensus       403 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~  481 (530)
                                                       -.|+.++|.||+++++|..-.= -.-|+++|..   .+..+++ +|.
T Consensus       306 ---------------------------------g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~---~~l~~i~nAGa  348 (431)
T PLN02926        306 ---------------------------------SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAE---SWLDKIDNAGS  348 (431)
T ss_pred             ---------------------------------CEEEEECCHHHHHHHHHhhChH-hheehhcCHH---HHHhhcCccce
Confidence                                             1345679999999999985322 2347777774   5666665 899


Q ss_pred             EEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618          482 VGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV  522 (530)
Q Consensus       482 v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v  522 (530)
                      |++..++..         +..+|     .+|.+|..|.-+...|++.-++
T Consensus       349 iFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~  393 (431)
T PLN02926        349 VFLGRWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTV  393 (431)
T ss_pred             eccCCCCchhhhccccCcCcccC-----CCcceeecCCCcHHHhcceeeE
Confidence            999765541         12344     4567777777788899876544


No 149
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=85.22  E-value=7  Score=42.03  Aligned_cols=104  Identities=17%  Similarity=0.154  Sum_probs=73.5

Q ss_pred             CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhH
Q 009618          181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDI  260 (530)
Q Consensus       181 g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~  260 (530)
                      |+.+.....|.|-|+++.+   +....+.+++.+|+.||.+++-+.+..       ++++.  .+|..+-..+.-.+   
T Consensus       634 GErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~~~~~---  698 (769)
T COG4230         634 GERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRIQVAK---  698 (769)
T ss_pred             ccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhheeecc---
Confidence            7889999999999999876   667888999999999999998765532       22221  25555433332111   


Q ss_pred             HhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC
Q 009618          261 GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG  301 (530)
Q Consensus       261 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg  301 (530)
                       .. +.+-.++.+.|.|.++-.+.+.+..+.+..|++.-.+
T Consensus       699 -~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~  737 (769)
T COG4230         699 -DW-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG  737 (769)
T ss_pred             -ch-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence             12 3344578899999999989999877777666655444


No 150
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=83.71  E-value=0.099  Score=55.08  Aligned_cols=142  Identities=16%  Similarity=0.092  Sum_probs=95.0

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceE---EEEEeCCHHHHHHHHH
Q 009618          376 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA---PLLCFKTEEEAIHMAN  452 (530)
Q Consensus       376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~---~i~~~~~~~eai~~~n  452 (530)
                      .+..+..++...+.+.+.++..++...+.. +.|.++.++...+++.....++  .|++..   .........+.+...+
T Consensus        79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~  155 (501)
T KOG2450|consen   79 RDAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR  155 (501)
T ss_pred             CCHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence            466788888888888888888888877665 3457788888777777666654  444443   2233344567777788


Q ss_pred             cCCCC--cEEEEEc-CCHHHHHHHHhhccceEEEECCCCCCCCC--------CcccCCC------CCCCCCCChHHHHHh
Q 009618          453 DTNAG--LAAYIFT-NNLQRTWRVSEALEYGLVGVNEGLISTEV--------APFGGVK------QSGLGREGSKYGMDE  515 (530)
Q Consensus       453 ~~~~g--L~a~v~s-~d~~~~~~~a~~l~~G~v~vN~~~~~~~~--------~pfGG~~------~SG~G~~~g~~~l~~  515 (530)
                      ..+.|  ...+.|. --.-.+++++-.|.+|+++||.+....|.        ...-|..      -+|.|++-|..=..+
T Consensus       156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH  235 (501)
T KOG2450|consen  156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASH  235 (501)
T ss_pred             CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhC
Confidence            88999  4555665 34677899999999999999987664431        1111221      377777766655555


Q ss_pred             hheee
Q 009618          516 FLEIK  520 (530)
Q Consensus       516 ~~~~k  520 (530)
                      +--.|
T Consensus       236 ~dv~k  240 (501)
T KOG2450|consen  236 PDVDK  240 (501)
T ss_pred             CCCce
Confidence            44433


No 151
>PF12340 DUF3638:  Protein of unknown function (DUF3638);  InterPro: IPR022099  This domain family is found in eukaryotes, and is approximately 230 amino acids in length. There are two conserved sequence motifs: LLE and NMG. 
Probab=73.04  E-value=20  Score=34.54  Aligned_cols=87  Identities=22%  Similarity=0.420  Sum_probs=60.9

Q ss_pred             EEeecC-CCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCC-----CCCCC
Q 009618          296 VSLELG-GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD-----GFGEG  369 (530)
Q Consensus       296 ~~lelg-G~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~-----p~~~~  369 (530)
                      ..+-+| ||+.+|+.           ++.....++.+    .=|++|....+++-.+.|.+++..+ +|.     |++.+
T Consensus        46 ~QlnMGeGKTsVI~P-----------mla~~LAdg~~----LvrviVpk~Ll~q~~~~L~~~lg~l-~~r~i~~lpFsR~  109 (229)
T PF12340_consen   46 MQLNMGEGKTSVIVP-----------MLALALADGSR----LVRVIVPKALLEQMRQMLRSRLGGL-LNRRIYHLPFSRS  109 (229)
T ss_pred             eeecccCCccchHHH-----------HHHHHHcCCCc----EEEEEcCHHHHHHHHHHHHHHHHHH-hCCeeEEecccCC
Confidence            455666 88877652           22223334333    4588999999999888898888764 332     56666


Q ss_pred             cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCC
Q 009618          370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGG  402 (530)
Q Consensus       370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg  402 (530)
                      +.    ++.+..+.+.+.++++...|+.+++-.
T Consensus       110 ~~----~~~~~~~~~~~l~~~~~~~~gill~~P  138 (229)
T PF12340_consen  110 TP----LTPETLEKIRQLLEECMRSGGILLATP  138 (229)
T ss_pred             CC----CCHHHHHHHHHHHHHHHHcCCEEEeCh
Confidence            65    466788999999999998888777644


No 152
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=58.11  E-value=26  Score=29.62  Aligned_cols=62  Identities=18%  Similarity=0.166  Sum_probs=42.5

Q ss_pred             HHHHHHcCCCCccEEeecC-CchhHHhHhhcC-CCceEEEeeCCHHH-------HHHHHHHHhcccceEEee
Q 009618          237 AELALQAGIPPGVVNVVMG-NAPDIGDALLTS-PQVRKITFTGSTAV-------GKKLMAGAAGTVKKVSLE  299 (530)
Q Consensus       237 ~~~l~~aGlP~gvv~~v~g-~~~~~~~~L~~~-~~v~~V~ftGs~~~-------g~~i~~~~a~~~~~~~le  299 (530)
                      ++.|++.|+|...++-++. ..+++.+.+ .+ .+|+.|++|-+...       +..|.+.+.....|+...
T Consensus        35 a~~L~~~Gi~~~~v~~~~~~g~~~i~~~i-~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~  105 (112)
T cd00532          35 SRVLADAGIPVRAVSKRHEDGEPTVDAAI-AEKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTP  105 (112)
T ss_pred             HHHHHHcCCceEEEEecCCCCCcHHHHHH-hCCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEEC
Confidence            3445678999877776654 245665554 56 78999999765433       777888887777776654


No 153
>COG5470 Uncharacterized conserved protein [Function unknown]
Probab=55.79  E-value=33  Score=28.07  Aligned_cols=22  Identities=18%  Similarity=0.117  Sum_probs=18.7

Q ss_pred             EEEEEeCCHHHHHHHHHcCCCC
Q 009618          436 APLLCFKTEEEAIHMANDTNAG  457 (530)
Q Consensus       436 ~~i~~~~~~~eai~~~n~~~~g  457 (530)
                      +.|+.|+|.+.|.+.-|+.+|.
T Consensus        55 ~vviEFps~~~ar~~y~SpeYq   76 (96)
T COG5470          55 NVVIEFPSLEAARDCYNSPEYQ   76 (96)
T ss_pred             EEEEEcCCHHHHHHHhcCHHHH
Confidence            4688999999999998887765


No 154
>PF07045 DUF1330:  Protein of unknown function (DUF1330);  InterPro: IPR010753 This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.; PDB: 2FIU_B 3HHL_A 3DCA_D 3LO3_I.
Probab=51.74  E-value=48  Score=24.92  Aligned_cols=45  Identities=24%  Similarity=0.297  Sum_probs=30.3

Q ss_pred             HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCC
Q 009618          393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA  456 (530)
Q Consensus       393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~  456 (530)
                      .-|++++..|..         |.++.+ ..+         ...+.|+.|+|.+.+.++.|+.+|
T Consensus        17 ~~GG~~l~~~~~---------~~~leG-~~~---------~~~~viieFPs~~aa~~~~~speY   61 (65)
T PF07045_consen   17 KYGGRVLARGGE---------PEVLEG-DWD---------PDRVVIIEFPSMEAAKAWYNSPEY   61 (65)
T ss_dssp             HTT-EEEEECEE---------EEEEES-T-S---------SSEEEEEEESSHHHHHHHHCSHHH
T ss_pred             HcCCEEEEECCc---------eeEEec-CCC---------CCeEEEEECCCHHHHHHHHCCHhH
Confidence            368888875433         355655 111         256789999999999999887654


No 155
>PF13376 OmdA:  Bacteriocin-protection, YdeI or OmpD-Associated
Probab=47.44  E-value=53  Score=24.59  Aligned_cols=35  Identities=17%  Similarity=0.157  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHH
Q 009618           91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYD  125 (530)
Q Consensus        91 ~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~  125 (530)
                      ++|+..+++....|...|..++...|..++..+..
T Consensus         7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~   41 (63)
T PF13376_consen    7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS   41 (63)
T ss_pred             CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence            46889999988899999999999999999887764


No 156
>PF03295 Pox_TAA1:  Poxvirus trans-activator protein A1 C-terminal;  InterPro: IPR004975 Late transcription factor VLTF-2, acts with RNA polymerase to initiate transcription from late gene promoters [].
Probab=41.85  E-value=27  Score=25.90  Aligned_cols=29  Identities=31%  Similarity=0.453  Sum_probs=24.9

Q ss_pred             cccccccceEEEEEeCCHHHHHHHHHcCC
Q 009618          427 SREEVFGPVAPLLCFKTEEEAIHMANDTN  455 (530)
Q Consensus       427 ~~eE~FGPv~~i~~~~~~~eai~~~n~~~  455 (530)
                      ++||.=--+++++.|++.|++++++|...
T Consensus         9 LREEPKisLLPLv~Y~~Pe~Vi~iIN~lR   37 (63)
T PF03295_consen    9 LREEPKISLLPLVFYEDPEEVINIINELR   37 (63)
T ss_pred             eccCCcceEEeeeeccCHHHHHHHHHHhh
Confidence            56777667899999999999999999863


No 157
>KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=41.06  E-value=3.9e+02  Score=26.86  Aligned_cols=169  Identities=21%  Similarity=0.261  Sum_probs=89.8

Q ss_pred             CCCceeEEEEeeceEEEEECCCCcch-H-HHHHHHhhHhhcCCEEEe--ecCCCcHHHHHHHHHHHHHcCCCCccEEeec
Q 009618          179 LPDRRLFVLKQPVGVAGAITPWNFPL-A-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM  254 (530)
Q Consensus       179 ~~g~~~~~~~~P~GVv~~i~p~n~P~-~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~  254 (530)
                      ..|..+....+|+|-|+...|.--.+ . ..+..-.||-.+||.-|+  -|....--++..+.-+..++|.-.    ++-
T Consensus       115 m~GV~C~R~sRpI~~VGLYiPGGTAvLPSTALMLgvPAqvAgCk~vV~atPprKDG~v~pEvvY~A~k~Ga~~----I~l  190 (446)
T KOG2697|consen  115 MKGVRCKRVSRPIGSVGLYIPGGTAVLPSTALMLGVPAQVAGCKTVVLATPPRKDGSVCPEVVYCAKKAGATH----ILL  190 (446)
T ss_pred             cCceeeeecCccccceeEEccCCceeccchHhhhcCcHhhcCCceEEEecCCCcCCccCcceeeehhhcChhh----eec
Confidence            34666777778888887776643322 1 222233688889996554  344444344444555566665443    332


Q ss_pred             CCchhHHhHhh----cCCCceEEEeeCCHHH--HHHHHHHHhcccceEEeecC-CCccEEE--ecCCCHHHHHHHHHHHH
Q 009618          255 GNAPDIGDALL----TSPQVRKITFTGSTAV--GKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAK  325 (530)
Q Consensus       255 g~~~~~~~~L~----~~~~v~~V~ftGs~~~--g~~i~~~~a~~~~~~~lelg-G~~~~iV--~~dAD~~~a~~~i~~s~  325 (530)
                      ..|.+.-.++.    .-|+|++|.=.|..-+  ++.+.+.-  +..-+.+.+. |.+-++|  +++|+.+..+.+++..+
T Consensus       191 AGGAQAiAAMAyGt~~~PKV~KIfGPGNQfVTAAKM~vQNd--~~AlvsIDmPAGPSEVLVIADE~a~p~~vA~DLLSQA  268 (446)
T KOG2697|consen  191 AGGAQAIAAMAYGTDSCPKVEKIFGPGNQFVTAAKMIVQND--YEALVSIDMPAGPSEVLVIADEHASPVYVAADLLSQA  268 (446)
T ss_pred             cccHHHHHHHHhccccCcchhhhcCCchhhhhhhhhheecc--ccceEEeccCCCCceEEEEecCCCChHHHHHHHHhHh
Confidence            22444333332    3578888876554432  22222221  1233555665 6555544  56788988888776554


Q ss_pred             hhccCCccccCCeEEEehhhHHHHHHHHHHHhh
Q 009618          326 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK  358 (530)
Q Consensus       326 f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~  358 (530)
                      -.  |   .-.+.++|.-+.-.+.++++.+++.
T Consensus       269 EH--G---~DSQviLv~V~lS~~~~~~Iq~ai~  296 (446)
T KOG2697|consen  269 EH--G---PDSQVILVVVGLSVDMLNAIQEAIA  296 (446)
T ss_pred             hc--C---CCceEEEEEecCCHHHHHHHHHHHH
Confidence            32  1   2235566544444454555554443


No 158
>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]
Probab=40.75  E-value=53  Score=30.10  Aligned_cols=50  Identities=22%  Similarity=0.254  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhc---CCCceEEEeeCCHHH
Q 009618          231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT---SPQVRKITFTGSTAV  281 (530)
Q Consensus       231 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~---~~~v~~V~ftGs~~~  281 (530)
                      .+...+.+.|+++|.-.....+++.+...+-..+..   .. +|.|..||++..
T Consensus        27 ~sG~~l~~~L~~ag~~~~~~~iV~D~~~~I~~~l~~~~~~~-~DvvlttGGTG~   79 (169)
T COG0521          27 KSGPLLVELLEEAGHNVAAYTIVPDDKEQIRATLIALIDED-VDVVLTTGGTGI   79 (169)
T ss_pred             cchhHHHHHHHHcCCccceEEEeCCCHHHHHHHHHHHhcCC-CCEEEEcCCccC
Confidence            367789999999999888889998765555544444   34 899999999954


No 159
>PF01513 NAD_kinase:  ATP-NAD kinase;  InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=37.38  E-value=1.5e+02  Score=29.52  Aligned_cols=100  Identities=17%  Similarity=0.167  Sum_probs=65.1

Q ss_pred             EEeecC-CCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHh-----------------------------HhhcCCCc
Q 009618          221 VVVKPS-EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGD-----------------------------ALLTSPQV  270 (530)
Q Consensus       221 VVlKps-~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~-----------------------------~L~~~~~v  270 (530)
                      +|.||. +.+...+..+.+.|.+..   +...++..   .+++                             ......++
T Consensus         4 ii~np~~~~~~~~~~~~~~~L~~~~---~~~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (285)
T PF01513_consen    4 IIANPNKPEAIELANELARWLLEKQ---GIEVLVEG---SIAEDILEAIKKRYEVISVEKKLKTLDDTRNALEEMLEEGV   77 (285)
T ss_dssp             EEESSCGHCCCHHHHHHHHHHHHTT---TEEEEEEH---HHHHSHCCCSHSCCCCCTTSHCCCCTCEEEECCHHHHCCCS
T ss_pred             EEEcCCCHHHHHHHHHHHHHHHhCC---CEEEEECh---HHHHHHHHhccccccccccccccccccccchhhhhhcccCC
Confidence            567777 466667777888887762   33333321   1111                             11224678


Q ss_pred             eEEEeeCCHHHHHHHHHHHhcccceEE-eecCCCccEEEecCCCHHHHHHHHHHHHh
Q 009618          271 RKITFTGSTAVGKKLMAGAAGTVKKVS-LELGGNAPCIVFDDADLNVAVNGALAAKF  326 (530)
Q Consensus       271 ~~V~ftGs~~~g~~i~~~~a~~~~~~~-lelgG~~~~iV~~dAD~~~a~~~i~~s~f  326 (530)
                      |.++.-|+..|-..+.+......+|+. +.+|-++.+-..+..+++.+++.++.+.+
T Consensus        78 D~ii~lGGDGT~L~~~~~~~~~~~Pilgin~G~lgfl~~~~~~~~~~~l~~~~~g~~  134 (285)
T PF01513_consen   78 DLIIVLGGDGTFLRAARLFGDYDIPILGINTGTLGFLTEFEPEDIEEALEKILAGEY  134 (285)
T ss_dssp             SEEEEEESHHHHHHHHHHCTTST-EEEEEESSSSTSSSSEEGCGHHHHHHHHHHTHC
T ss_pred             CEEEEECCCHHHHHHHHHhccCCCcEEeecCCCccccccCCHHHHHHHHHHHhcCCe
Confidence            999999999999999988876556653 45554444444456789999999998766


No 160
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=36.39  E-value=75  Score=26.48  Aligned_cols=63  Identities=27%  Similarity=0.248  Sum_probs=43.5

Q ss_pred             HHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHH----HHHHHHHHHhcccceEEeec
Q 009618          237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA----VGKKLMAGAAGTVKKVSLEL  300 (530)
Q Consensus       237 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~----~g~~i~~~~a~~~~~~~lel  300 (530)
                      ++.|.+.|++...++.+++..+++.+.+ .+.+++.|+.+=+..    .+..+.+.+.+...|++.+.
T Consensus        36 ~~~l~~~gi~~~~v~~~~~~~~~i~~~i-~~~~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T~~  102 (110)
T cd01424          36 AKYLQEAGIPVEVVNKVSEGRPNIVDLI-KNGEIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFTTL  102 (110)
T ss_pred             HHHHHHcCCeEEEEeecCCCchhHHHHH-HcCCeEEEEECCCCCccCccHHHHHHHHHHhCCCEEecH
Confidence            3446678999887887765456665555 566899998864332    36788888888878877543


No 161
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=35.87  E-value=3e+02  Score=28.88  Aligned_cols=63  Identities=17%  Similarity=0.193  Sum_probs=31.7

Q ss_pred             hHhhcCCCceEEEe------eCCHHHHHHHHHHHhc--ccceEEeecCCCcc-----------EEEecCCCHHHHHHHHH
Q 009618          262 DALLTSPQVRKITF------TGSTAVGKKLMAGAAG--TVKKVSLELGGNAP-----------CIVFDDADLNVAVNGAL  322 (530)
Q Consensus       262 ~~L~~~~~v~~V~f------tGs~~~g~~i~~~~a~--~~~~~~lelgG~~~-----------~iV~~dAD~~~a~~~i~  322 (530)
                      +.++++|.|+.|..      +....+++.|.+...+  ..+|++.-+.|.+.           +-++.+-|++.|++.++
T Consensus       303 ~~ll~Dp~VdaVlv~i~ggi~~~~~vA~~Ii~a~~~~~~~kPvvv~l~G~~~e~~~~iL~~~Gipvf~~~~~~~a~~~~v  382 (392)
T PRK14046        303 RLVLSDRNVKAILVNIFAGINRCDWVAEGVVQAAREVGIDVPLVVRLAGTNVEEGRKILAESGLPIITADTLAEAAEKAV  382 (392)
T ss_pred             HHHHcCCCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEcCCCCHHHHHHHHHHcCCCeeecCCHHHHHHHHH
Confidence            44566666666652      1223455555544433  34566555554221           22344556666666666


Q ss_pred             HH
Q 009618          323 AA  324 (530)
Q Consensus       323 ~s  324 (530)
                      ..
T Consensus       383 ~~  384 (392)
T PRK14046        383 EA  384 (392)
T ss_pred             HH
Confidence            43


No 162
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=35.72  E-value=90  Score=26.52  Aligned_cols=62  Identities=13%  Similarity=0.152  Sum_probs=41.5

Q ss_pred             HHHHHH-cCCCCccEEee--cCCchhHHhHhhcCCCceEEEeeCC-------HHHHHHHHHHHhcccceEEeec
Q 009618          237 AELALQ-AGIPPGVVNVV--MGNAPDIGDALLTSPQVRKITFTGS-------TAVGKKLMAGAAGTVKKVSLEL  300 (530)
Q Consensus       237 ~~~l~~-aGlP~gvv~~v--~g~~~~~~~~L~~~~~v~~V~ftGs-------~~~g~~i~~~~a~~~~~~~lel  300 (530)
                      ++.|++ .|++-..+ -+  .+..+++.+.+ .+..++.|++|-+       ...+..|.+.+-.+..|+..-+
T Consensus        37 a~~L~~~~Gi~v~~v-k~~~~~g~~~i~~~i-~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~~Ip~~Ttl  108 (115)
T cd01422          37 GLLIQEATGLTVNRM-KSGPLGGDQQIGALI-AEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVYNIPLATNR  108 (115)
T ss_pred             HHHHHHhhCCcEEEE-ecCCCCchhHHHHHH-HcCceeEEEEcCCCCCCCcccccHHHHHHHHHHcCCCEEEcH
Confidence            344666 78987666 33  33245666555 4668999999965       3348888888887777776543


No 163
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=34.56  E-value=4.8e+02  Score=26.34  Aligned_cols=128  Identities=20%  Similarity=0.172  Sum_probs=75.1

Q ss_pred             cCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeec-CCc-------hhHHhHhhcCCCceEEEeeCC-----HHHHH
Q 009618          217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM-GNA-------PDIGDALLTSPQVRKITFTGS-----TAVGK  283 (530)
Q Consensus       217 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~-g~~-------~~~~~~L~~~~~v~~V~ftGs-----~~~g~  283 (530)
                      .|+.-++--|-.   .+..+...+.+.|+  |.=.++. |+.       .+..+.|.++|+.+.|.+-+-     ...++
T Consensus       150 ~G~ValiSQSG~---l~~~l~~~~~~~gi--G~S~~VS~Gn~~~adv~~~d~L~yl~~Dp~T~~I~ly~E~~G~~~~d~~  224 (300)
T PLN00125        150 PGRIGIVSRSGT---LTYEAVFQTTAVGL--GQSTCVGIGGDPFNGTNFVDCLEKFVKDPQTEGIILIGEIGGTAEEDAA  224 (300)
T ss_pred             CCcEEEEeCCcc---HHHHHHHHHHHcCC--CeEEEEEeCCCCCCCCCHHHHHHHHhhCCCCcEEEEEeccCCchHHHHH
Confidence            687666644432   22345566667776  3334443 321       256678889999999987765     34677


Q ss_pred             HHHHHHhcccceEEeecCCCcc-EEEe--cCCCHHH---HHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHh
Q 009618          284 KLMAGAAGTVKKVSLELGGNAP-CIVF--DDADLNV---AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV  357 (530)
Q Consensus       284 ~i~~~~a~~~~~~~lelgG~~~-~iV~--~dAD~~~---a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~  357 (530)
                      .+.+.+. +.||+++--.|.+. .=.-  ...-+..   --..+..++|...|        +++.++ .+++.+.+++.+
T Consensus       225 ~f~~aa~-~~KPVV~lk~Grs~~~g~~~sHTGala~~~~G~~~~~~a~~rq~G--------vi~v~~-~~el~~~~~~~~  294 (300)
T PLN00125        225 AFIKESG-TEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAG--------VTVVES-PAKIGVAMLEVF  294 (300)
T ss_pred             HHHHHhc-CCCCEEEEEecCCCCCCCCccchhhhhcCCCCCHHHHHHHHHHCC--------CeEeCC-HHHHHHHHHHHH
Confidence            7776654 46999888888774 1111  1111100   01234566777777        444444 578888887777


Q ss_pred             hc
Q 009618          358 KN  359 (530)
Q Consensus       358 ~~  359 (530)
                      +.
T Consensus       295 ~~  296 (300)
T PLN00125        295 KE  296 (300)
T ss_pred             Hh
Confidence            54


No 164
>PF06945 DUF1289:  Protein of unknown function (DUF1289);  InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=34.48  E-value=44  Score=24.01  Aligned_cols=21  Identities=19%  Similarity=0.330  Sum_probs=18.3

Q ss_pred             hhhcCCHHHHHHHHHHHHHHH
Q 009618          107 SWSKLTAAERSKGLRKWYDLL  127 (530)
Q Consensus       107 ~w~~~~~~~R~~iL~~~a~~l  127 (530)
                      .|..++..+|.+++.++....
T Consensus        29 ~W~~~s~~er~~i~~~l~~R~   49 (51)
T PF06945_consen   29 DWKSMSDDERRAILARLRARR   49 (51)
T ss_pred             HHhhCCHHHHHHHHHHHHHHh
Confidence            599999999999999887654


No 165
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=32.01  E-value=45  Score=30.35  Aligned_cols=50  Identities=22%  Similarity=0.200  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhc---CCCceEEEeeCCHHHH
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT---SPQVRKITFTGSTAVG  282 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~---~~~v~~V~ftGs~~~g  282 (530)
                      ...+..++++.|...-.+.+++.+..++.+.|.+   ..+.|.|..||++..+
T Consensus        24 ~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVIttGGtg~g   76 (163)
T TIGR02667        24 GQYLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQVILITGGTGFT   76 (163)
T ss_pred             HHHHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence            4467788899998877777887655555555544   2468999999988653


No 166
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=31.27  E-value=1.1e+02  Score=22.37  Aligned_cols=32  Identities=19%  Similarity=0.046  Sum_probs=23.2

Q ss_pred             HHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618          102 FDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus       102 ~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      +.....|+.++.++|............++..+
T Consensus        33 ~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e   64 (66)
T cd01390          33 KILGEKWKELSEEEKKKYEEKAEKDKERYEKE   64 (66)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence            34446799999999988877776666555444


No 167
>PF07287 DUF1446:  Protein of unknown function (DUF1446);  InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=28.33  E-value=1e+02  Score=31.99  Aligned_cols=104  Identities=19%  Similarity=0.203  Sum_probs=55.4

Q ss_pred             HHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH---hhcccc
Q 009618          286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA---VKNLKV  362 (530)
Q Consensus       286 ~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~---~~~~~~  362 (530)
                      ...+.++..|++...||-||.-      ....++.+    ....|..   .+.-+|+.+...+.+..+.+.   +..+..
T Consensus        64 L~~~~~~gIkvI~NaGg~np~~------~a~~v~ei----a~e~Gl~---lkvA~V~gDd~~~~v~~~~~~g~~~~~l~~  130 (362)
T PF07287_consen   64 LPAAAEKGIKVITNAGGLNPAG------CADIVREI----ARELGLS---LKVAVVYGDDLKDEVKELLAEGETIRPLDT  130 (362)
T ss_pred             HHHHHhCCCCEEEeCCCCCHHH------HHHHHHHH----HHhcCCC---eeEEEEECccchHhHHHHHhCCCCCccCCC
Confidence            4455567788999999888742      33334444    3344533   677777776554444444332   334444


Q ss_pred             CCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 009618          363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH  405 (530)
Q Consensus       363 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~  405 (530)
                      |.|++....-  .++...+--. .-|-+|+++||.++..|..-
T Consensus       131 ~~~l~~~~~~--~~~a~aylGa-~pI~~AL~~GADIVI~GR~~  170 (362)
T PF07287_consen  131 GPPLSEWDDR--IVSANAYLGA-EPIVEALEAGADIVITGRVA  170 (362)
T ss_pred             CCCcchhccc--cceEEEecCh-HHHHHHHHcCCCEEEeCccc
Confidence            5544431110  1111111112 23446788999998888653


No 168
>COG1438 ArgR Arginine repressor [Transcription]
Probab=27.41  E-value=4.6e+02  Score=23.57  Aligned_cols=47  Identities=19%  Similarity=0.126  Sum_probs=36.1

Q ss_pred             HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCC
Q 009618          206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN  256 (530)
Q Consensus       206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~  256 (530)
                      .+...+...=-.||-+|+|..|-   .+..+++++...+.| +.+-.+.|+
T Consensus        80 ~~~~~v~~vd~~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGd  126 (150)
T COG1438          80 YLKDLVLSIDRNGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGD  126 (150)
T ss_pred             HHHHHheeeccCCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCC
Confidence            34455666667899999998886   467888999888787 788877764


No 169
>PF09011 HMG_box_2:  HMG-box domain;  InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=26.02  E-value=1.7e+02  Score=22.36  Aligned_cols=35  Identities=11%  Similarity=0.082  Sum_probs=22.1

Q ss_pred             HHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618           99 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE  133 (530)
Q Consensus        99 ~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  133 (530)
                      +..+.+...|+.|+..+|...-.+....=++...+
T Consensus        34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e   68 (73)
T PF09011_consen   34 EVMKEISERWKSLSEEEKEPYEERAKEDKERYERE   68 (73)
T ss_dssp             HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            34445667899999999988766655543333333


No 170
>PF07085 DRTGG:  DRTGG domain;  InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=25.01  E-value=1.1e+02  Score=25.25  Aligned_cols=50  Identities=20%  Similarity=0.252  Sum_probs=31.4

Q ss_pred             CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618          245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK  295 (530)
Q Consensus       245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~  295 (530)
                      +.+|.+-+++++..+.-...+.+ .+.++.+||+......+.+.+.+...|
T Consensus        38 ~~~~~lvIt~gdR~di~~~a~~~-~i~~iIltg~~~~~~~v~~la~~~~i~   87 (105)
T PF07085_consen   38 LKPGDLVITPGDREDIQLAAIEA-GIACIILTGGLEPSEEVLELAKELGIP   87 (105)
T ss_dssp             HHTTEEEEEETT-HHHHHHHCCT-TECEEEEETT----HHHHHHHHHHT-E
T ss_pred             cCCCeEEEEeCCcHHHHHHHHHh-CCCEEEEeCCCCCCHHHHHHHHHCCCE
Confidence            44477777778766665555443 499999999999999988887765433


No 171
>KOG2924 consensus Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones]
Probab=24.87  E-value=3.5e+02  Score=26.83  Aligned_cols=212  Identities=17%  Similarity=0.213  Sum_probs=103.1

Q ss_pred             EeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccC
Q 009618          251 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG  330 (530)
Q Consensus       251 ~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~G  330 (530)
                      |+|+..-.++-+.|++|.-|+.|+-|++--- ..+.+-++.+.. --.+|.|         +++.            ..|
T Consensus       106 NliSSGlRetirylvqh~mVdviVttaGGvE-EDlIKclaPTy~-g~F~L~G---------~~LR------------~~G  162 (366)
T KOG2924|consen  106 NLISSGLRETIRYLVQHNMVDVIVTTAGGVE-EDLIKCLAPTYL-GDFSLDG---------KELR------------ENG  162 (366)
T ss_pred             hhhhhhHHHHHHHHHHhcceeEEEecCCccH-HHHHHHhCccce-eeeecCh---------HHHH------------hhh
Confidence            3444324677899999999999988775433 333333332210 0112222         2222            122


Q ss_pred             CccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 009618          331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT  410 (530)
Q Consensus       331 Q~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~  410 (530)
                      .  .-.-.++|+.+-|-+|-+-+...+.++-.     +....|++-++...   -+.+-+-+...-.+++=....  .-.
T Consensus       163 l--NRiGNllvPndNYckfEdWl~pIld~mle-----eq~~~~~iwTPSk~---I~rlGk~IndesSvlYWA~Kn--~IP  230 (366)
T KOG2924|consen  163 L--NRIGNLLVPNDNYCKFEDWLMPILDEMLE-----EQKTEGVIWTPSKM---IARLGKEINDESSVLYWAAKN--HIP  230 (366)
T ss_pred             h--hhhccEecCCcchhhHHHHHHHHHHHHHH-----HhhhcCcccCHHHH---HHHHhhhhCCccceeehhhhC--CCc
Confidence            1  22346788888888888776665554322     22334677776432   222222233333444321111  123


Q ss_pred             eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC-----CCC---cEEEEEcCCHHHHHHHHhhccceEE
Q 009618          411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT-----NAG---LAAYIFTNNLQRTWRVSEALEYGLV  482 (530)
Q Consensus       411 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~-----~~g---L~a~v~s~d~~~~~~~a~~l~~G~v  482 (530)
                      .+-|.+.++---||..++.---.| +.+    |.=|=|+.+|..     ..|   |.++|.-.....+.-+-+..+. .|
T Consensus       231 vf~PaltDGSlGDmlyFHs~k~~~-L~~----DIv~Dir~iNt~av~a~~tgmIIlGgGvvKHHI~NAnLmrNGad~-~V  304 (366)
T KOG2924|consen  231 VFSPALTDGSLGDMLYFHSFKNSG-LVL----DIVEDIRRINTEAVFANKTGMIILGGGVVKHHICNANLMRNGADY-AV  304 (366)
T ss_pred             eecccccCCcccceEEEeeccCCC-eEE----eHHHHHHhhhhhhhhccccceEEEcCchhhhhcchhhhhhcCcce-EE
Confidence            466777666555665444322223 221    222444555542     111   3444444444444443333333 69


Q ss_pred             EECCCCCC---------CCCCcccCCCCCC
Q 009618          483 GVNEGLIS---------TEVAPFGGVKQSG  503 (530)
Q Consensus       483 ~vN~~~~~---------~~~~pfGG~~~SG  503 (530)
                      +||+..-+         +.+..||-+|-+-
T Consensus       305 yINtaqEfDGSDsGArpDEAVSWGKir~~a  334 (366)
T KOG2924|consen  305 YINTAQEFDGSDSGARPDEAVSWGKIRPDA  334 (366)
T ss_pred             EecccccccCcccCCCcccccccccccCCC
Confidence            99986542         2246677666443


No 172
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=24.78  E-value=5.8e+02  Score=23.88  Aligned_cols=95  Identities=14%  Similarity=0.046  Sum_probs=59.5

Q ss_pred             hHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH-H-----HcCCCCccEEeecCCchhH----------------H
Q 009618          204 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA-L-----QAGIPPGVVNVVMGNAPDI----------------G  261 (530)
Q Consensus       204 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l-~-----~aGlP~gvv~~v~g~~~~~----------------~  261 (530)
                      +...+..++.++..|+.|.+...-.+...+..++.-| .     +.|+|.-  .+ ..+....                .
T Consensus        27 i~~a~~~l~~~l~~~~rI~~~G~GgSa~~A~~~a~~l~~~~~~~r~gl~a~--~l-~~d~~~~ta~and~~~~~~f~~ql  103 (196)
T PRK10886         27 ISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAI--AL-NTDNVVLTAIANDRLHDEVYAKQV  103 (196)
T ss_pred             HHHHHHHHHHHHHcCCEEEEEECcHHHHHHHHHHHHHhccccccCCCcceE--Ee-cCcHHHHHHHhccccHHHHHHHHH
Confidence            4556777888899999999998888888887777544 2     4466642  22 1111111                1


Q ss_pred             hHhhcCCCc-eEEEeeCCHHHHHHHHHHHhcccceEEeecC
Q 009618          262 DALLTSPQV-RKITFTGSTAVGKKLMAGAAGTVKKVSLELG  301 (530)
Q Consensus       262 ~~L~~~~~v-~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg  301 (530)
                      ..+....++ =.++.+|.+..-..+.+.+.++..+++.=+|
T Consensus       104 ~~~~~~gDvli~iS~SG~s~~v~~a~~~Ak~~G~~vI~IT~  144 (196)
T PRK10886        104 RALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTG  144 (196)
T ss_pred             HHcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            123333443 3466778777777777777777777776665


No 173
>PF00505 HMG_box:  HMG (high mobility group) box;  InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=24.70  E-value=1.7e+02  Score=21.68  Aligned_cols=32  Identities=13%  Similarity=0.111  Sum_probs=23.3

Q ss_pred             HhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618          103 DAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus       103 ~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      .+...|..++.++|...-....+....+..++
T Consensus        34 ~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~   65 (69)
T PF00505_consen   34 ILAQMWKNLSEEEKAPYKEEAEEEKERYEKEM   65 (69)
T ss_dssp             HHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34467999999999887777766666655544


No 174
>PRK05066 arginine repressor; Provisional
Probab=24.34  E-value=5.3e+02  Score=23.27  Aligned_cols=42  Identities=19%  Similarity=0.169  Sum_probs=33.5

Q ss_pred             hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCC
Q 009618          212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN  256 (530)
Q Consensus       212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~  256 (530)
                      ...-..+|-+|+|-.|..   +..++.++.+.++|++++-.+.|+
T Consensus        87 ~~v~~~~~~ivIkT~pG~---A~~va~~iD~~~~~~~IlGTIAGd  128 (156)
T PRK05066         87 LDIDHNDALIVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD  128 (156)
T ss_pred             eeeeecCCEEEEEcCCCh---HHHHHHHHHcCCCCCCeEEEEecC
Confidence            334457999999988766   557888899988999999988774


No 175
>PRK13938 phosphoheptose isomerase; Provisional
Probab=24.16  E-value=5.2e+02  Score=24.21  Aligned_cols=98  Identities=13%  Similarity=0.064  Sum_probs=60.5

Q ss_pred             chHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH-H--cCCCC-ccEEeecCCchhH----------------Hh
Q 009618          203 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-Q--AGIPP-GVVNVVMGNAPDI----------------GD  262 (530)
Q Consensus       203 P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~-~--aGlP~-gvv~~v~g~~~~~----------------~~  262 (530)
                      ++......+..+|..|+.+++-..-.....+..++.-|. .  .+.|+ +.+.+..+ +...                ..
T Consensus        30 ~~~~~a~~~~~~l~~g~rI~i~G~G~S~~~A~~fa~~L~~~~~~~r~~lg~~~l~~~-~~~~~a~~nd~~~~~~~~~~~~  108 (196)
T PRK13938         30 AARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHAN-SSHLTAVANDYDYDTVFARALE  108 (196)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHcCCCccCCcCccceEEEeCC-hHHHHHhhccccHHHHHHHHHH
Confidence            455677888899999999999998888888887775442 1  22333 33443332 2221                01


Q ss_pred             HhhcCCC-ceEEEeeCCHHHHHHHHHHHhcccceEEeecC
Q 009618          263 ALLTSPQ-VRKITFTGSTAVGKKLMAGAAGTVKKVSLELG  301 (530)
Q Consensus       263 ~L~~~~~-v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg  301 (530)
                      ......+ +=.++++|.+..-..+.+.+.++..+++.=++
T Consensus       109 ~~~~~~DllI~iS~SG~t~~vi~a~~~Ak~~G~~vI~iT~  148 (196)
T PRK13938        109 GSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTG  148 (196)
T ss_pred             hcCCCCCEEEEEcCCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            2333333 33455667777766677777777777776665


No 176
>smart00398 HMG high mobility group.
Probab=23.62  E-value=2.1e+02  Score=20.93  Aligned_cols=32  Identities=19%  Similarity=0.119  Sum_probs=23.4

Q ss_pred             HhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618          103 DAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL  134 (530)
Q Consensus       103 ~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  134 (530)
                      .....|+.++..+|...........+++..++
T Consensus        35 ~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~   66 (70)
T smart00398       35 KLGERWKLLSEEEKAPYEEKAKKDKERYEEEM   66 (70)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34467999999999888777766666655544


No 177
>COG2237 Predicted membrane protein [Function unknown]
Probab=23.20  E-value=76  Score=32.60  Aligned_cols=93  Identities=20%  Similarity=0.183  Sum_probs=59.6

Q ss_pred             HHhHhhcC-CCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCe
Q 009618          260 IGDALLTS-PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR  338 (530)
Q Consensus       260 ~~~~L~~~-~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~  338 (530)
                      +-+.|... +|+....+||+..+|-.-....++.+-.+..+++-....+|.+.++=+.++.- +.|+     -.-.+.+|
T Consensus        56 iydeLk~~geDveIA~vsG~~~vgv~sd~~l~~qld~vl~~~~pd~av~VsDGaeDe~ivPi-I~Sr-----~~I~svkr  129 (364)
T COG2237          56 IYDELKAKGEDVEIAVVSGDKDVGVESDLKLSEQLDEVLSELDPDDAVVVSDGAEDERIVPI-IQSR-----VKIDSVKR  129 (364)
T ss_pred             HHHHHhccCCceEEEEEecCCCcchhhHHHHHHHHHHHHHcCCCcEEEEeccCcccchhhhh-hhcc-----cceeEEEE
Confidence            33444443 47888889999887766666666666677777877778888888877766654 4443     35577899


Q ss_pred             EEEehh-hHHHHHHHHHHHhh
Q 009618          339 VLVQEG-IYEKFADAFSKAVK  358 (530)
Q Consensus       339 v~V~~~-i~d~f~~~l~~~~~  358 (530)
                      ++|..+ -.|.--=.+++.++
T Consensus       130 VVVrQs~~iEStYyli~~~l~  150 (364)
T COG2237         130 VVVRQSRGIESTYYLIKRYLK  150 (364)
T ss_pred             EEEecCCChhHHHHHHHHHHh
Confidence            999432 12333334444444


No 178
>PF13344 Hydrolase_6:  Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=22.53  E-value=2.5e+02  Score=22.99  Aligned_cols=84  Identities=17%  Similarity=0.141  Sum_probs=51.6

Q ss_pred             CCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCH
Q 009618          200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST  279 (530)
Q Consensus       200 ~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~  279 (530)
                      ++-|+......+-..-..|-.+++-.... ..+...+.+-|...|++-..=++++. +......|.++...+.|...|+.
T Consensus        12 g~~~ipga~e~l~~L~~~g~~~~~lTNns-~~s~~~~~~~L~~~Gi~~~~~~i~ts-~~~~~~~l~~~~~~~~v~vlG~~   89 (101)
T PF13344_consen   12 GNEPIPGAVEALDALRERGKPVVFLTNNS-SRSREEYAKKLKKLGIPVDEDEIITS-GMAAAEYLKEHKGGKKVYVLGSD   89 (101)
T ss_dssp             TTEE-TTHHHHHHHHHHTTSEEEEEES-S-SS-HHHHHHHHHHTTTT--GGGEEEH-HHHHHHHHHHHTTSSEEEEES-H
T ss_pred             CCCcCcCHHHHHHHHHHcCCCEEEEeCCC-CCCHHHHHHHHHhcCcCCCcCEEECh-HHHHHHHHHhcCCCCEEEEEcCH
Confidence            45566555555554555577777755543 34445666667999998766666654 55666777776678889999998


Q ss_pred             HHHHHH
Q 009618          280 AVGKKL  285 (530)
Q Consensus       280 ~~g~~i  285 (530)
                      ..-+.+
T Consensus        90 ~l~~~l   95 (101)
T PF13344_consen   90 GLREEL   95 (101)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            754443


No 179
>PF11672 DUF3268:  Protein of unknown function (DUF3268);  InterPro: IPR021686 This entry is represented by Listeria phage P100, Gp150. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=22.30  E-value=95  Score=25.96  Aligned_cols=52  Identities=23%  Similarity=0.270  Sum_probs=34.9

Q ss_pred             EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHH
Q 009618           72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLL  127 (530)
Q Consensus        72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l  127 (530)
                      ..-..|.|..++++.++   ++++.+-..|+++|+. |+.-. -+|.+..+-+++.|
T Consensus        40 yVG~H~~t~~PlGtLAd---~~lR~~R~~ah~~fd~lw~~~~-~~R~~aY~wLA~~l   92 (102)
T PF11672_consen   40 YVGCHPGTDIPLGTLAD---AELRRARKAAHRAFDPLWQSGH-MSRSDAYRWLAKKL   92 (102)
T ss_pred             eeeeeCCCCCcCcccCC---HHHHHHHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHc
Confidence            33466788899998774   4677788889999986 66332 23666555555544


No 180
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=21.81  E-value=5.6e+02  Score=22.63  Aligned_cols=96  Identities=16%  Similarity=0.054  Sum_probs=58.0

Q ss_pred             EEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHc-CCCCccEEeecC---CchhHHhHhhcCC
Q 009618          193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA-GIPPGVVNVVMG---NAPDIGDALLTSP  268 (530)
Q Consensus       193 Vv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a-GlP~gvv~~v~g---~~~~~~~~L~~~~  268 (530)
                      |.+.+....-+-...+.+-...+..|..++.=     +-|    ++.|++. |++-..+  +.+   ..+++.+.+ .+.
T Consensus         7 v~lsv~d~dK~~l~~~a~~l~~ll~Gf~l~AT-----~gT----a~~L~~~~Gi~v~~v--i~~~~gg~~~i~~~I-~~g   74 (142)
T PRK05234          7 IALIAHDHKKDDLVAWVKAHKDLLEQHELYAT-----GTT----GGLIQEATGLDVTRL--LSGPLGGDQQIGALI-AEG   74 (142)
T ss_pred             EEEEEeccchHHHHHHHHHHHHHhcCCEEEEe-----ChH----HHHHHhccCCeeEEE--EcCCCCCchhHHHHH-HcC
Confidence            34444444445555555666677778886542     223    4556677 9986554  433   235565555 566


Q ss_pred             CceEEEeeC---C----HHHHHHHHHHHhcccceEEeec
Q 009618          269 QVRKITFTG---S----TAVGKKLMAGAAGTVKKVSLEL  300 (530)
Q Consensus       269 ~v~~V~ftG---s----~~~g~~i~~~~a~~~~~~~lel  300 (530)
                      +|+.|++|-   +    ...+..|.+.+-.+..|++..+
T Consensus        75 ~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l  113 (142)
T PRK05234         75 KIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNR  113 (142)
T ss_pred             ceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCH
Confidence            899999975   1    2246678888877766665433


No 181
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=20.59  E-value=2.3e+02  Score=21.50  Aligned_cols=30  Identities=17%  Similarity=0.154  Sum_probs=20.9

Q ss_pred             HhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618          103 DAFNSWSKLTAAERSKGLRKWYDLLMAHKE  132 (530)
Q Consensus       103 ~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~  132 (530)
                      .....|+.++.+++...........+++.+
T Consensus        35 ~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~   64 (72)
T cd01388          35 ILGDRWKALSNEEKQPYYEEAKKLKELHMK   64 (72)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence            344679999999998776666555555443


No 182
>PRK10680 molybdopterin biosynthesis protein MoeA; Provisional
Probab=20.37  E-value=85  Score=33.23  Aligned_cols=50  Identities=18%  Similarity=0.246  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhc-CCCceEEEeeCCHHHH
Q 009618          233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT-SPQVRKITFTGSTAVG  282 (530)
Q Consensus       233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~-~~~v~~V~ftGs~~~g  282 (530)
                      ...|..++++.|.-...+.+++.+..++.+.|.+ ..+.|.|+.||++.+|
T Consensus       206 ~~~l~a~l~~~G~~~~~~~~v~Dd~~~i~~~l~~a~~~~DlvIttGG~S~G  256 (411)
T PRK10680        206 RLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVG  256 (411)
T ss_pred             HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHhccCCCEEEEcCCCCCC
Confidence            3467778899987655566666654455555543 2457889999998865


Done!