Your job contains 1 sequence.
>009619
MSHIMFQTTPVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVRRKNMLITCSVPSPLID
GGDHSVVLLERCYKAPSALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQQSETTP
ELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDR
KFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGIS
RAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAF
VVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVG
LSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALGYGAFLGLYANMRYQLLCGFDRAVINH
FDVIGVALFLSTALRVLNVQLGERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNGSTQ
KSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRKKVTA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009619
(530 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176826 - symbol:AT5G24690 "AT5G24690" species... 1394 7.0e-156 2
TAIR|locus:2158155 - symbol:RER1 "AT5G22790" species:3702... 233 7.2e-17 1
TAIR|locus:2078446 - symbol:AT3G56140 "AT3G56140" species... 237 9.4e-17 1
TAIR|locus:2063136 - symbol:AT2G40400 species:3702 "Arabi... 231 4.3e-16 1
TAIR|locus:2065649 - symbol:LCD1 "AT2G37860" species:3702... 208 5.2e-14 1
TAIR|locus:505006615 - symbol:AT5G12470 "AT5G12470" speci... 159 1.3e-08 1
TAIR|locus:2077828 - symbol:AT3G08630 "AT3G08630" species... 148 1.6e-07 1
TAIR|locus:2077838 - symbol:AT3G08640 "AT3G08640" species... 144 4.4e-07 1
>TAIR|locus:2176826 [details] [associations]
symbol:AT5G24690 "AT5G24690" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009706 "chloroplast inner
membrane" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] GO:GO:0005739 EMBL:CP002688 GO:GO:0009706
InterPro:IPR021825 Pfam:PF11891 EMBL:AF370204 EMBL:AY056434
EMBL:AY133867 EMBL:AK229775 EMBL:AK229818 EMBL:AK229879
EMBL:AK229887 EMBL:AK229942 EMBL:AK229959 EMBL:AK230063
EMBL:AK230067 EMBL:AK230098 EMBL:AK230099 EMBL:AK230309
EMBL:AK230320 EMBL:AK230414 IPI:IPI00531220 RefSeq:NP_197857.2
UniGene:At.49058 UniGene:At.71083 UniGene:At.75041 STRING:Q93W02
PRIDE:Q93W02 EnsemblPlants:AT5G24690.1 GeneID:832541
KEGG:ath:AT5G24690 TAIR:At5g24690 InParanoid:Q93W02 OMA:LRQAYEM
PhylomeDB:Q93W02 ProtClustDB:CLSN2690197 ArrayExpress:Q93W02
Genevestigator:Q93W02 Uniprot:Q93W02
Length = 521
Score = 1394 (495.8 bits), Expect = 7.0e-156, Sum P(2) = 7.0e-156
Identities = 270/346 (78%), Positives = 305/346 (88%)
Query: 167 LFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPT 226
LFRRR L E+FDRKFVDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPT
Sbjct: 161 LFRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPT 220
Query: 227 TTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDL 286
TTR ISR+LPQG+SRAF+GRMLADP+FLYKL+LEQAAT+GC+V WE++NRK R+K+EWDL
Sbjct: 221 TTRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDL 280
Query: 287 ALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRI 346
ALINVLTV+ACNA VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP REFDLQKR
Sbjct: 281 ALINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQKRF 340
Query: 347 HSLFYKAAELCMVGLSAGAVQGSLSNYLAGKK-DRLSVTIPSVSTSALGYGAFLGLYANM 405
HSLFYKAAEL ++GL+AG +QGSLSN LAGKK +R+SVT+PS+ST+ALGYGAFLG+YAN+
Sbjct: 341 HSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYGAFLGIYANL 400
Query: 406 RYQLLCGFDRAVINHFDVIGVALFLSTALRVLNVQLGERSRLAWLGVEADPLLQSDDLLK 465
RYQLLCGF+R V +HFDVIGVALF TALR++NVQLGE+SR WLGVEADPL QSDDLL
Sbjct: 401 RYQLLCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDDLLA 460
Query: 466 KAYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEE 511
KAYNRPS++ + S +W ISKNAIVSGL LG KQ DSV +
Sbjct: 461 KAYNRPSEEA--VAKPSSKWFISKNAIVSGL--LGKKQE--DSVSD 500
Score = 147 (56.8 bits), Expect = 7.0e-156, Sum P(2) = 7.0e-156
Identities = 37/70 (52%), Positives = 48/70 (68%)
Query: 63 DHSVVLLERCYKAPSALP-----SGS---TAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQ 114
D SV LERC + PS + SGS + + P+MKG ++G+ GAVTLEKGKLD TQ+
Sbjct: 50 DDSVSGLERCLQLPSGVELGTSSSGSFSASTQMCPVMKG-KFGSVGAVTLEKGKLDMTQK 108
Query: 115 QSETTPELAT 124
SET+PE+AT
Sbjct: 109 ISETSPEIAT 118
>TAIR|locus:2158155 [details] [associations]
symbol:RER1 "AT5G22790" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009706 "chloroplast inner
membrane" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009706 EMBL:AB025618
eggNOG:NOG239107 InterPro:IPR021825 Pfam:PF11891 EMBL:AF367348
EMBL:AY081723 IPI:IPI00548224 RefSeq:NP_197671.1 UniGene:At.28733
PaxDb:Q9FGP9 PRIDE:Q9FGP9 EnsemblPlants:AT5G22790.1 GeneID:832342
KEGG:ath:AT5G22790 TAIR:At5g22790 HOGENOM:HOG000152462
InParanoid:Q9FGP9 OMA:PYARIGK PhylomeDB:Q9FGP9
ProtClustDB:CLSN2916941 Genevestigator:Q9FGP9 Uniprot:Q9FGP9
Length = 433
Score = 233 (87.1 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 74/248 (29%), Positives = 118/248 (47%)
Query: 181 KFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGIS 240
KF + V+ E + + LP +A + + ++++L + F+ RS +
Sbjct: 150 KF-EEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSC--AML 206
Query: 241 RAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAF 300
R RMLADPSFL+K+ E A C E++ R E E++L ++L +
Sbjct: 207 R---NRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVA 263
Query: 301 VVWSLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAA 354
+V LAP G +T F DL+ LP+++FE P +F + +RI + FYK
Sbjct: 264 LVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGL 323
Query: 355 ELCMVGLSAGAVQGSLSNYL-----AGKKDRLSVTIPSVSTSALGYGAFLGLYANMRYQL 409
VG G + ++N + + KK V IP + SA +G FLGL +N RYQ+
Sbjct: 324 LYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQI 383
Query: 410 LCGFDRAV 417
+ G +R V
Sbjct: 384 INGLERVV 391
>TAIR|locus:2078446 [details] [associations]
symbol:AT3G56140 "AT3G56140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009543 "chloroplast thylakoid lumen"
evidence=ISS] GO:GO:0009507 EMBL:CP002686 InterPro:IPR021825
Pfam:PF11891 EMBL:AY093111 EMBL:BT010340 EMBL:AK227110
IPI:IPI00520041 RefSeq:NP_191173.2 UniGene:At.34962
ProteinModelPortal:Q8RWG3 STRING:Q8RWG3 PaxDb:Q8RWG3 PRIDE:Q8RWG3
EnsemblPlants:AT3G56140.1 GeneID:824780 KEGG:ath:AT3G56140
TAIR:At3g56140 eggNOG:NOG242091 HOGENOM:HOG000082965
InParanoid:Q8RWG3 OMA:RRKENFF PhylomeDB:Q8RWG3
ProtClustDB:CLSN2688835 ArrayExpress:Q8RWG3 Genevestigator:Q8RWG3
InterPro:IPR007314 Pfam:PF04187 Uniprot:Q8RWG3
Length = 745
Score = 237 (88.5 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 80/251 (31%), Positives = 121/251 (48%)
Query: 178 FDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQ 237
FDR + V+N + LP + ++GLVS + + P + R Q
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRF--Q 475
Query: 238 GISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTAC 297
G F R+LADP FL +L +E+A +I T++ + E RKE +E D + + + +
Sbjct: 476 G----FRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 531
Query: 298 NAFVVWSLAPCRSY----GNTFRFD----LQNTLQKLPNNIFERSYPFREFDLQKRIHSL 349
+ F VW AP S+ T D L+ L +P+N F++S RE++L RI S+
Sbjct: 532 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 591
Query: 350 FYKAAELCMVGL--SAGAVQGSLSNYLAGK--KDRLSVTI-PSVST---SALGYGAFLGL 401
+L VG+ S AV S + +A K K L V P S +A+ YG FLG
Sbjct: 592 IVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGT 651
Query: 402 YANMRYQLLCG 412
AN+RYQ++ G
Sbjct: 652 SANLRYQIIAG 662
>TAIR|locus:2063136 [details] [associations]
symbol:AT2G40400 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009543 "chloroplast
thylakoid lumen" evidence=ISS] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] EMBL:CP002685 EMBL:AC007020
InterPro:IPR021825 Pfam:PF11891 ProtClustDB:CLSN2688835
InterPro:IPR007314 Pfam:PF04187 EMBL:AF410285 EMBL:AY102131
IPI:IPI00518341 PIR:A84829 RefSeq:NP_565930.1 RefSeq:NP_850329.1
UniGene:At.14284 ProteinModelPortal:Q9SIY5 STRING:Q9SIY5
PRIDE:Q9SIY5 EnsemblPlants:AT2G40400.1 EnsemblPlants:AT2G40400.2
GeneID:818633 KEGG:ath:AT2G40400 TAIR:At2g40400 InParanoid:Q9SIY5
OMA:IEHRISD PhylomeDB:Q9SIY5 ArrayExpress:Q9SIY5
Genevestigator:Q9SIY5 Uniprot:Q9SIY5
Length = 735
Score = 231 (86.4 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 77/251 (30%), Positives = 121/251 (48%)
Query: 178 FDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQ 237
FDR + V+N + LP ++ ++GLVS + F + P + R Q
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRF--Q 466
Query: 238 GISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTAC 297
G F R+LADP FL +L +E+A +I T++ + E RKE +E D + + + +
Sbjct: 467 G----FRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 522
Query: 298 NAFVVWSLAPCRSY----GNTF---RFD-LQNTLQKLPNNIFERSYPFREFDLQKRIHSL 349
+ F VW AP S+ T D L+ L +P+N F++S +E+ L RI S+
Sbjct: 523 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 582
Query: 350 FYKAAELCMVGL--SAGAVQGSLSNYLAGK--KDRLSVTIPSVST----SALGYGAFLGL 401
+L VG+ S AV S + Y K K L V + + +AL YG +LG
Sbjct: 583 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGT 642
Query: 402 YANMRYQLLCG 412
+N+RYQ++ G
Sbjct: 643 SSNIRYQIIAG 653
>TAIR|locus:2065649 [details] [associations]
symbol:LCD1 "AT2G37860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0048366
"leaf development" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0009941 GO:GO:0048366 EMBL:AK316808 IPI:IPI00518318
RefSeq:NP_001031506.1 UniGene:At.14627 PaxDb:B9DFK5 PRIDE:B9DFK5
EnsemblPlants:AT2G37860.3 GeneID:818362 KEGG:ath:AT2G37860
TAIR:At2g37860 eggNOG:NOG239107 HOGENOM:HOG000242221 OMA:IKSAALW
PhylomeDB:B9DFK5 ProtClustDB:CLSN2680100 Genevestigator:B9DFK5
InterPro:IPR021825 Pfam:PF11891 Uniprot:B9DFK5
Length = 432
Score = 208 (78.3 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 67/247 (27%), Positives = 114/247 (46%)
Query: 181 KFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGIS 240
KF + V+ E LP+ +A + + ++++L + + F RS +
Sbjct: 150 KF-EEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSW--AML 206
Query: 241 RAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAF 300
R RMLADPSFL+K+ E C + E++ R + E++L + ++L T N
Sbjct: 207 R---NRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIA 263
Query: 301 VVWSLAPCRSYGNT-----FRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAE 355
+V LAP +G F + LP+++FE P F Q+R+ + FYK
Sbjct: 264 LVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIM 323
Query: 356 LCMVGLSAGAVQGSLSNYLAGKKDRLS-----VTIPSVSTSALGYGAFLGLYANMRYQLL 410
VG G V ++N + K ++ + +P + SA +G FL + +N RYQ++
Sbjct: 324 YGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQII 383
Query: 411 CGFDRAV 417
G +R V
Sbjct: 384 NGLERVV 390
>TAIR|locus:505006615 [details] [associations]
symbol:AT5G12470 "AT5G12470" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009706 "chloroplast inner membrane"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] GO:GO:0005739 EMBL:CP002688 GO:GO:0009706
EMBL:AL592312 InterPro:IPR021825 Pfam:PF11891 EMBL:AY091130
EMBL:AY114001 EMBL:BT002454 EMBL:BT008470 EMBL:AK176209
IPI:IPI00525191 RefSeq:NP_568280.1 UniGene:At.23837 PRIDE:Q94CJ5
EnsemblPlants:AT5G12470.1 GeneID:831122 KEGG:ath:AT5G12470
TAIR:At5g12470 InParanoid:Q94CJ5 OMA:MAIASCF PhylomeDB:Q94CJ5
ProtClustDB:CLSN2917616 Genevestigator:Q94CJ5 Uniprot:Q94CJ5
Length = 386
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/268 (24%), Positives = 121/268 (45%)
Query: 197 LPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYK 256
LP A E G + + + +FL + + R++ + G F R+LAD F+ K
Sbjct: 119 LPKDLAAAIEAGRIPGSVITRFLELQ-KSAVMRWLMQF---G---GFRERLLADDLFMAK 171
Query: 257 LILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFR 316
L +E I E E R+E E ++ +V + +V+ AP S
Sbjct: 172 LAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLA 231
Query: 317 FD---LQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSN- 372
+ P+N F+ + + L +R+ ++ A+L VG ++ V +++N
Sbjct: 232 LTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNA 291
Query: 373 YLAGKK--DRLSV----TIPSVSTSALGYGAFLGLYANMRYQLLCG-FDRAVIN---HFD 422
++ +K D+ S T+P VSTS + YG ++ + +N+RYQ++ G ++ ++ H
Sbjct: 292 FIKARKAVDQNSEGEVETVPIVSTS-VAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQH 350
Query: 423 VIGVALFLSTALRVLNVQLGERSRLAWL 450
+ ++ L A+R N LG L W+
Sbjct: 351 KLALSA-LCFAVRTGNTFLGS---LLWV 374
>TAIR|locus:2077828 [details] [associations]
symbol:AT3G08630 "AT3G08630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009536 "plastid" evidence=IDA] GO:GO:0009536
EMBL:CP002686 EMBL:AC012562 InterPro:IPR021825 Pfam:PF11891
ProtClustDB:CLSN2684953 EMBL:BT012218 EMBL:BT012416 IPI:IPI00533657
RefSeq:NP_187475.1 UniGene:At.17599 PRIDE:Q9C9Z3
EnsemblPlants:AT3G08630.1 GeneID:820010 KEGG:ath:AT3G08630
TAIR:At3g08630 InParanoid:Q9C9Z3 OMA:IEMSEIS PhylomeDB:Q9C9Z3
Genevestigator:Q9C9Z3 Uniprot:Q9C9Z3
Length = 339
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 57/219 (26%), Positives = 101/219 (46%)
Query: 236 PQGIS-RAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTV 294
P G+ + + R+ AD F +K+++E + VL ++ +R E D ++
Sbjct: 97 PLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVG 156
Query: 295 TACNAFVVWSLAPCR-SYGNTFRFDLQNTLQKLPNN-IFERSYPFREFDLQKRIHSLFYK 352
+ N +++ LAP S+G++ L + P++ +FE+ F L R +L YK
Sbjct: 157 SILNFTLMYLLAPSAISHGSSNL--LPGIFRSCPSSHMFEQG----NFTLMNRFGTLVYK 210
Query: 353 AAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTI------PSVSTSALGYGAFLGLYANMR 406
VGL+AG V ++SN L + ++ + P ++L + +G+ AN+R
Sbjct: 211 GMVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVR 270
Query: 407 YQLLCGFDRAVINHFDVIGVALFLSTALRVLNVQLGERS 445
YQ L G + + + V ALRV+N LG S
Sbjct: 271 YQTLNGAEFLLEKSLPPL-VFKTSVIALRVVNNVLGGMS 308
>TAIR|locus:2077838 [details] [associations]
symbol:AT3G08640 "AT3G08640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009941 EMBL:AC012562
InterPro:IPR021825 Pfam:PF11891 EMBL:AY081327 EMBL:AY128826
IPI:IPI00535020 RefSeq:NP_187476.1 UniGene:At.19866 PaxDb:Q9C9Z2
PRIDE:Q9C9Z2 EnsemblPlants:AT3G08640.1 GeneID:820011
KEGG:ath:AT3G08640 TAIR:At3g08640 eggNOG:NOG326812
HOGENOM:HOG000029112 InParanoid:Q9C9Z2 OMA:CANNVAG PhylomeDB:Q9C9Z2
ProtClustDB:CLSN2684953 ArrayExpress:Q9C9Z2 Genevestigator:Q9C9Z2
Uniprot:Q9C9Z2
Length = 337
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 44/176 (25%), Positives = 83/176 (47%)
Query: 246 RMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSL 305
R+ ADP F +K+++E+ + VL ++ +R E D ++ + N +++ L
Sbjct: 111 RVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYML 170
Query: 306 APCRSYGNTFRFDLQNTLQKLPNN-IFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAG 364
AP + + + L + P++ +FE+ F + R +L YK VGL+AG
Sbjct: 171 APTAATLGSSQ-TLPGIFRNCPSSHMFEQG----SFTVMNRFGTLVYKGMVFASVGLAAG 225
Query: 365 AVQGSLSNYLAGKKDRLSVTI------PSVSTSALGYGAFLGLYANMRYQLLCGFD 414
V ++SN L + ++ + P ++L + +G+ AN RYQ L G +
Sbjct: 226 LVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIE 281
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 530 453 0.00093 118 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 616 (65 KB)
Total size of DFA: 262 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.87u 0.15s 33.02t Elapsed: 00:00:01
Total cpu time: 32.87u 0.15s 33.02t Elapsed: 00:00:01
Start: Fri May 10 14:38:31 2013 End: Fri May 10 14:38:32 2013