Your job contains 1 sequence.
>009626
MANAGGIPGPEQKPEALNPNLDEIEEEEEEDDDVVEEEDDDDLEEDDDAAQPQRKSRVDR
PKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINY
KLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSL
KYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYK
EQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRN
SPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLP
IGRDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRGDSSDENA
DASERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAKLTENEYRNFSLPK
FLQSTRSSVGAGIVFPTNLFRLEVNYCRILKKSSHDHGKNGIQISLSAPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009626
(530 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169702 - symbol:AT5G05520 "AT5G05520" species... 1760 2.3e-181 1
TAIR|locus:2074618 - symbol:AT3G11070 "AT3G11070" species... 1736 8.1e-179 1
UNIPROTKB|E1C8A2 - symbol:SAMM50 "Uncharacterized protein... 219 3.4e-23 2
POMBASE|SPAC17C9.06 - symbol:sam50 "mitochondrial sorting... 179 2.0e-17 2
ZFIN|ZDB-GENE-041114-30 - symbol:samm50l "sorting and ass... 237 4.5e-17 1
ASPGD|ASPL0000065328 - symbol:AN10873 species:162425 "Eme... 236 7.7e-17 1
MGI|MGI:1915903 - symbol:Samm50 "sorting and assembly mac... 232 1.7e-16 1
UNIPROTKB|F6UPR4 - symbol:SAMM50 "Uncharacterized protein... 225 9.5e-16 1
UNIPROTKB|Q9Y512 - symbol:SAMM50 "Sorting and assembly ma... 225 1.0e-15 1
RGD|1303219 - symbol:Samm50 "sorting and assembly machine... 225 1.0e-15 1
UNIPROTKB|E2QSZ0 - symbol:SAMM50 "Uncharacterized protein... 225 1.0e-15 1
ZFIN|ZDB-GENE-040426-806 - symbol:samm50 "sorting and ass... 222 2.2e-15 1
UNIPROTKB|G4N9M6 - symbol:MGG_09978 "Sorting assembly mac... 222 2.9e-15 1
UNIPROTKB|G3MZZ3 - symbol:SAMM50 "Sorting and assembly ma... 216 1.1e-14 1
UNIPROTKB|Q2HJ55 - symbol:SAMM50 "Sorting and assembly ma... 216 1.1e-14 1
UNIPROTKB|Q0C1B3 - symbol:bamA "Outer membrane protein as... 135 2.1e-09 2
WB|WBGene00001662 - symbol:gop-3 species:6239 "Caenorhabd... 136 3.3e-09 2
CGD|CAL0004681 - symbol:SAM50 species:5476 "Candida albic... 132 5.9e-09 2
UNIPROTKB|Q5A4H6 - symbol:CaO19.7358 "Putative uncharacte... 132 5.9e-09 2
FB|FBgn0033989 - symbol:CG7639 species:7227 "Drosophila m... 127 6.1e-08 3
UNIPROTKB|A8MZI2 - symbol:SAMM50 "Sorting and assembly ma... 137 1.5e-06 1
UNIPROTKB|Q74AT3 - symbol:yaeT "Outer membrane protein as... 120 4.1e-05 2
TIGR_CMR|GSU_2268 - symbol:GSU_2268 "outer membrane prote... 120 4.1e-05 2
UNIPROTKB|Q2GD52 - symbol:bamA "Outer membrane protein as... 115 5.0e-05 2
TIGR_CMR|NSE_0718 - symbol:NSE_0718 "outer membrane prote... 115 5.0e-05 2
UNIPROTKB|I3LQ32 - symbol:CGI-51 "Uncharacterized protein... 101 0.00016 1
UNIPROTKB|Q5HX37 - symbol:bamA "Outer membrane protein as... 125 0.00036 2
TIGR_CMR|CJE_0124 - symbol:CJE_0124 "outer membrane prote... 125 0.00036 2
SGD|S000004971 - symbol:SAM50 "Essential component of the... 73 0.00069 3
>TAIR|locus:2169702 [details] [associations]
symbol:AT5G05520 "AT5G05520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0043090 "amino acid
import" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051604 "protein maturation" evidence=RCA]
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
GO:GO:0005739 EMBL:CP002688 GO:GO:0009536 EMBL:AB005241
GO:GO:0019867 OMA:RNSAIFP EMBL:AY059801 EMBL:AY093246
IPI:IPI00524138 RefSeq:NP_568157.1 UniGene:At.24120
ProteinModelPortal:Q9FFG3 SMR:Q9FFG3 PRIDE:Q9FFG3
EnsemblPlants:AT5G05520.1 GeneID:830435 KEGG:ath:AT5G05520
TAIR:At5g05520 InParanoid:Q9FFG3 PhylomeDB:Q9FFG3
ProtClustDB:CLSN2684056 Genevestigator:Q9FFG3 Uniprot:Q9FFG3
Length = 524
Score = 1760 (624.6 bits), Expect = 2.3e-181, P = 2.3e-181
Identities = 318/469 (67%), Positives = 399/469 (85%)
Query: 59 DRPKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANII 118
DR K E+LFRR+R PV +RVHDVIVKGN KTKD +IEAE+D +R ATT+QE+++A+ +
Sbjct: 56 DRIKAESLFRRMRATPVAVRVHDVIVKGNEKTKDHVIEAEVDVVRQATTLQELLKASKVA 115
Query: 119 NYKLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEG 178
N+ L+ L+ FDSV+ITLDSGPPELPGT+NV+I VVE+K+P++GQIGT+TK EA+SS++EG
Sbjct: 116 NFNLQALDIFDSVKITLDSGPPELPGTTNVVIDVVESKSPITGQIGTFTKAEARSSSLEG 175
Query: 179 SLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSS 238
SLKYKN FGYGD+WD SLAYG D SAEV G+YLPRF+G TP T+RV+L +QDWLKFSS
Sbjct: 176 SLKYKNIFGYGDIWDGSLAYGCDHSAEVGLGMYLPRFRGRPTPFTSRVYLSTQDWLKFSS 235
Query: 239 YKEQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDK 298
YKE++LGLSLGL + ++H+L YN+AWR L DPS M+S ++RRQLGH+ +S+LKYTFKFD+
Sbjct: 236 YKERALGLSLGLIASKYHELAYNIAWRNLIDPSQMASRSIRRQLGHNLVSALKYTFKFDQ 295
Query: 299 RNSPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVV 358
RNS LRPTRGY+F+ST+QIGGLAPDSR LRFLRQE DLR+AVP GFYR ALNFGI+ G+
Sbjct: 296 RNSSLRPTRGYSFISTSQIGGLAPDSRTLRFLRQEIDLRYAVPLGFYRAALNFGIAGGIT 355
Query: 359 LPIGRDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRGDSSDE 418
P G + ++ +PERFFLGGN+SP+CSLGGPSALWGFKTRGLGP EPRR+V+ DE
Sbjct: 356 FPWGSGYKSRASCVPERFFLGGNISPVCSLGGPSALWGFKTRGLGPNEPRREVQ---DDE 412
Query: 419 NADASERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAKLTENEYRNFSL 478
+ D ERDF+GGD+AV+AFADLSFD PL+WFR++GIHGH+FACAGN+A+L+EN+YRNF+
Sbjct: 413 SGDTYERDFVGGDVAVTAFADLSFDFPLKWFRDRGIHGHVFACAGNMAELSENKYRNFTA 472
Query: 479 PKFLQSTRSSVGAGIVFPTNLFRLEVNYCRILKKSSHDHGKNGIQISLS 527
PK L++ RSSVGAGIV PT+LFR+E+NYC ILKK HD K+G ++ S
Sbjct: 473 PKLLETFRSSVGAGIVVPTSLFRMELNYCHILKKQEHDRAKSGFFMTFS 521
>TAIR|locus:2074618 [details] [associations]
symbol:AT3G11070 "AT3G11070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0031307 "integral to mitochondrial outer membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0031307 EMBL:AC009991
EMBL:AC073395 eggNOG:COG4775 ProtClustDB:CLSN2684056 EMBL:AY099576
EMBL:BT002158 IPI:IPI00540026 RefSeq:NP_187718.1 UniGene:At.39812
ProteinModelPortal:Q9SRL6 IntAct:Q9SRL6 PaxDb:Q9SRL6 PRIDE:Q9SRL6
EnsemblPlants:AT3G11070.1 GeneID:820278 KEGG:ath:AT3G11070
TAIR:At3g11070 HOGENOM:HOG000241488 InParanoid:Q9SRL6 OMA:CIADRFF
PhylomeDB:Q9SRL6 Genevestigator:Q9SRL6 Uniprot:Q9SRL6
Length = 520
Score = 1736 (616.2 bits), Expect = 8.1e-179, P = 8.1e-179
Identities = 318/473 (67%), Positives = 394/473 (83%)
Query: 56 SRVDRPKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAA 115
S VDR K E+LFRR+R PVP+RVHDVI+ GN KTKD +IEAE+DA+R ATT+QE+++A+
Sbjct: 56 SSVDRIKAESLFRRMRAAPVPVRVHDVIIGGNEKTKDHIIEAEVDAVREATTLQELLEAS 115
Query: 116 NIINYKLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSST 175
+ N LR L+ FDSV ITLDSGPPELPGT+NV+I VVE+K+PL+GQIG YT+ EA+SS+
Sbjct: 116 RVANSNLRALDIFDSVNITLDSGPPELPGTTNVVIDVVESKSPLTGQIGAYTRAEARSSS 175
Query: 176 VEGSLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLK 235
VE SLKYKN FGYGD+WD S+ YG D SAEV G+YLPRF+GL TP T+R+FL +QDWLK
Sbjct: 176 VEASLKYKNIFGYGDIWDGSIVYGCDNSAEVGLGMYLPRFRGLSTPFTSRLFLSTQDWLK 235
Query: 236 FSSYKEQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFK 295
FSSYKE+SLGLSLGLFS ++H+L+Y +AWR L DPS ++ ++RRQLGH LS+LKYTF+
Sbjct: 236 FSSYKERSLGLSLGLFSSKYHELIYTIAWRNLIDPSQAAAVSIRRQLGHSLLSALKYTFR 295
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISS 355
FD+RNS LRPT GYAF+ST+QIGGLAPDSR LRFL+QE DLR+AVPFGFY A+NFG+S
Sbjct: 296 FDQRNSSLRPTNGYAFISTSQIGGLAPDSRSLRFLKQEVDLRYAVPFGFYNAAINFGVSG 355
Query: 356 GVVLPIGRDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRGDS 415
GV P G + +S+PERFFLGGN SP+CSL GPSALWGFKTRG+GP+EP+R +GDS
Sbjct: 356 GVSFPWGSGYQNRPSSIPERFFLGGNSSPVCSLSGPSALWGFKTRGVGPSEPKR--KGDS 413
Query: 416 SDENADASERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAKLTENEYRN 475
ERDF+GGD AV+AFADLSFDLP+RW RE+GIHGH+FACAGN+AKL+ENE+RN
Sbjct: 414 --------ERDFVGGDAAVTAFADLSFDLPVRWLRERGIHGHVFACAGNMAKLSENEFRN 465
Query: 476 FSLPKFLQSTRSSVGAGIVFPTNLFRLEVNYCRILKKSSHDHGKNGIQISLSA 528
F+ PKFL++ R+SVGAGIV PT+LFR+E+NYC ILKK HD ++G+ ++ SA
Sbjct: 466 FTAPKFLETFRTSVGAGIVLPTSLFRMELNYCHILKKQEHDQARSGVFLTFSA 518
>UNIPROTKB|E1C8A2 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001401 "mitochondrial sorting and assembly
machinery complex" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
GO:GO:0005743 GO:GO:0045040 GO:GO:0001401 CTD:25813
GeneTree:ENSGT00390000011355 OMA:DTRNSSI EMBL:AADN02006711
IPI:IPI00602465 RefSeq:XP_416458.2 UniGene:Gga.10268
ProteinModelPortal:E1C8A2 Ensembl:ENSGALT00000022959 GeneID:418234
KEGG:gga:418234 NextBio:20821433 Uniprot:E1C8A2
Length = 469
Score = 219 (82.2 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 80/312 (25%), Positives = 143/312 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +T+D +I E+ + A + ++++ ++ KL L F VE+ +D+
Sbjct: 47 VQHVHFDGLGRTRDDIIMYEIADVFKAKNLIDVMRKSHEAREKLLRLGIFRQVEVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK+ N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKFPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGISTEFNFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
+H L + WR L + +S +VR + GH SS+ + D RNS + P RG
Sbjct: 220 WKTNHTLKWEGVWRELGCLARTASFSVREESGHSLKSSISHAMVIDSRNSSILPKRGALL 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + FL+++F+ + + + + + G+++PIG D +S
Sbjct: 280 KINQELAGYTGGD--VSFLKEDFEFQLNKQL-LWDSVFSASLWGGMLVPIG-D---KPSS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 120 (47.3 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 51/149 (34%), Positives = 65/149 (43%)
Query: 379 GGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGGDLAVSAFA 438
GG L PI PS++ G GP VRG S S+ D+LGG+ +
Sbjct: 320 GGMLVPIGDK--PSSIADRFYLG-GPTS----VRGFSMYSIGPQSDGDYLGGEAYWAGGL 372
Query: 439 DLSFDLPLRWFREK-G--IHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVF 495
L LP R R G H F AGN+ L + L K + R S GAGIV
Sbjct: 373 HLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGDGPKAHLQKLAEYIRWSYGAGIVL 432
Query: 496 PT-NLFRLEVNYCRILKKSSHDHGKNGIQ 523
N+ RLE+NYC + S D +G+Q
Sbjct: 433 RLGNIARLELNYCFPMGVQSGDRICDGVQ 461
>POMBASE|SPAC17C9.06 [details] [associations]
symbol:sam50 "mitochondrial sorting and assembly
machinery complex subunit Sam50 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043623 "cellular protein complex assembly" evidence=ISO]
[GO:0045040 "protein import into mitochondrial outer membrane"
evidence=ISO] InterPro:IPR000184 Pfam:PF01103 PomBase:SPAC17C9.06
GO:GO:0016021 EMBL:CU329670 GO:GO:0043623 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 OMA:DTRNSSI PIR:T11586
RefSeq:NP_594600.1 ProteinModelPortal:Q10478 STRING:Q10478
EnsemblFungi:SPAC17C9.06.1 GeneID:2542441 KEGG:spo:SPAC17C9.06
HOGENOM:HOG000170308 OrthoDB:EOG45XC52 NextBio:20803498
Uniprot:Q10478
Length = 475
Score = 179 (68.1 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 90/359 (25%), Positives = 149/359 (41%)
Query: 72 NGPVPLRVHDVIVKGNTKTKDCLIEAEL----DAIRNATTMQEIIQAANIINYKLRELEC 127
N +P+ + + V G T+ I L D + A + + +++ N I L
Sbjct: 39 NSTLPVGISSIRVTGAHHTRPSFIRKVLKTCLDTSKPAKS-RSLLETLNAIQETTGNLMA 97
Query: 128 FDSVE---ITLDSGPPELPGTSN--VIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKY 182
F+ E I +D + G + V IQV E K L + GT G + + V ++
Sbjct: 98 FNVYETANIKIDRASSSVSGDDDLDVTIQVKE-KPRLYVETGTDV-GNVEGN-VHANVLA 154
Query: 183 KNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQ 242
+N FG +L +++YG + +S P T + +D SS+
Sbjct: 155 RNVFGGAELLSGNVSYGTRNRSTMSVNFETPVNADPKTRLRFNGHSNLRDNKSISSHDLL 214
Query: 243 SLGLSLGLFSIRHHDL-------VYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFK 295
+ G++L S++H DL NL WR +T + +S +VR + G SL YT+
Sbjct: 215 TKGITL---SLQHQDLWSGEHLLSQNLLWRQVTHLTEYASPSVRLEAGDSLKQSLSYTYT 271
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRT-ALNFGIS 354
D R+ + PT+G T ++ G FL+ EF + AV R+ +L+
Sbjct: 272 RDTRDHLMIPTKGDYVRQTLELAGFGFLPGDASFLKSEFWGQKAVALNSSRSVSLSLSAR 331
Query: 355 SGVVLPIGRDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRG 413
G + + + SL +RF LGG+ S L GF +GP + R + G
Sbjct: 332 IGALHSLNKK----QVSLCDRFMLGGSTS----------LRGFSEDRIGPKDGRDSLGG 376
Score = 109 (43.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 38/115 (33%), Positives = 52/115 (45%)
Query: 411 VRGDSSDENADASERDFLGGDLAVSAFA-DLSFDLPLRWFREKGIHGHLFACAGNVAKLT 469
+RG S D RD LGG A AF+ L F LP + K LFA AG ++ LT
Sbjct: 357 LRGFSEDRIGPKDGRDSLGGT-AYMAFSMSLLFPLP-KVDASKPFRLQLFANAGGLSNLT 414
Query: 470 E-NEYRNFSLPKFLQSTRSSVGAGIVFPTNLFRLEVNYCRILKKSSHDHGKNGIQ 523
N + L S G G+V+ T R E+N+ + + D G+ G+Q
Sbjct: 415 SPNPCGTYK--SILSKPCISTGLGLVYATPAARFELNFTLPIATTEKDIGRKGLQ 467
>ZFIN|ZDB-GENE-041114-30 [details] [associations]
symbol:samm50l "sorting and assembly machinery
component 50 homolog, like" species:7955 "Danio rerio" [GO:0019867
"outer membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 ZFIN:ZDB-GENE-041114-30
GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775 OrthoDB:EOG4H72BD
HOGENOM:HOG000015411 EMBL:BC085536 IPI:IPI00489535
RefSeq:NP_001007344.1 UniGene:Dr.124972 ProteinModelPortal:Q5U3I0
GeneID:492471 KEGG:dre:492471 CTD:492471 NextBio:20865031
Uniprot:Q5U3I0
Length = 469
Score = 237 (88.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 84/313 (26%), Positives = 143/313 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLD-- 136
V V ++G +TK+ + E+ + A + E+++ ++ +L L F VE+ +D
Sbjct: 47 VQHVNIEGLGRTKEDYLGYEISDVFTARNLVEVMRKSHEARQRLLRLGIFRDVEVVIDIS 106
Query: 137 SGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E K L+G T G + S V G +K N G G+
Sbjct: 107 EGADALPNGLDVTFEVTELKR-LTGSYNTMV-GNNEGSMVLG-IKLPNMLGRGEKLTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLG----LSLGL 250
+YG + E S G+ + P+ T ++ + + +SS KE G LSL L
Sbjct: 164 SYG---TKETSYGLSFFKPQSGYFERNFTVNLYKVTGQF-PWSSLKETDRGVSTELSLPL 219
Query: 251 FSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYA 310
+ + H L + WR L + +S VR + GH S+L +T D RNS + P +G
Sbjct: 220 W-MTDHTLKWEGVWRELGCLARSASFAVREESGHTLKSALSHTMVVDTRNSAILPRKGAL 278
Query: 311 FVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMST 370
++ G FL+++ +L+ F + + L+ + G++ P+G T
Sbjct: 279 LRINQELAGYTGGDA--NFLKEDVELQLNKQF-IWGSVLSASLWGGMIYPLGAQ----PT 331
Query: 371 SLPERFFLGGNLS 383
S+ +RF+LGG S
Sbjct: 332 SIADRFYLGGPTS 344
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 87/339 (25%), Positives = 134/339 (39%)
Query: 209 GVYLPRFKGLVTPMTARVFLQSQDW-LKFSSYKEQSLGLSLGLFSIRHHDLVYNLAWRTL 267
G+ LP G +T + +++ S +K QS G F++ + + W +L
Sbjct: 146 GIKLPNMLGRGEKLTFQFSYGTKETSYGLSFFKPQS-GYFERNFTVNLYKVTGQFPWSSL 204
Query: 268 --TD---------PSHMSSNTVR-----RQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
TD P M+ +T++ R+LG S + + ++ L+ +
Sbjct: 205 KETDRGVSTELSLPLWMTDHTLKWEGVWRELGC-LARSASFAVR-EESGHTLKSALSHTM 262
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
V T+ + P L + QE G+ NF + V L + + F+ S
Sbjct: 263 VVDTRNSAILPRKGALLRINQELA-------GYTGGDANF-LKEDVELQLNKQFIWGSV- 313
Query: 372 LPERFFLGGNLSPICSLGG-PSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGG 430
L + GG + P LG P+++ G GP VRG SE D+LGG
Sbjct: 314 LSASLW-GGMIYP---LGAQPTSIADRFYLG-GPTS----VRGFGMYSIGPQSEGDYLGG 364
Query: 431 DLAVSAFADLSFDLPLRWFREKG-----IHGHLFACAGNVAKLTENEYRNFSLPKFLQST 485
+ + L LP R KG H F AGN+ L E L K +
Sbjct: 365 EAYWAGGLHLYTPLPFR--SNKGGLADLFRTHFFLNAGNICNLNYGEGPRAHLQKLAECI 422
Query: 486 RSSVGAGIVFPT-NLFRLEVNYCRILKKSSHDHGKNGIQ 523
R S GAGI+ N+ RLE+NYC + S D +G+Q
Sbjct: 423 RWSYGAGIILRLGNIARLELNYCFPMGVQSGDRICDGVQ 461
>ASPGD|ASPL0000065328 [details] [associations]
symbol:AN10873 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019867 "outer membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000184 Pfam:PF01103 EMBL:BN001304 GO:GO:0019867
EnsemblFungi:CADANIAT00000489 OMA:RNSAIFP Uniprot:C8VCB1
Length = 516
Score = 236 (88.1 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 121/487 (24%), Positives = 216/487 (44%)
Query: 71 RNGPVPLRVHDVIVKGNTKTKDCLIEAELDAI----RNAT-TMQEIIQAANIINYKLREL 125
+N +P + V V T+ +E L+ + R T T+ E ++ ++ KL
Sbjct: 53 QNSTLPCVISSVQVLNAKNTRRGFLEQILNPLLSQHRKQTYTLSEALREISVRADKLNRF 112
Query: 126 ECFDS-VEITLDSGPPE--LPGTSNVIIQV-VETKTPLSGQIGTYTKGEAKSSTVEGSLK 181
+ F V + LD P G +N+ + V+ K+ + + GT G A+ S G+L
Sbjct: 113 DIFQQPVSVYLDQTPASETQTGLTNISVYYSVKEKSRVLLKTGT-DLGNAEGSAY-GNLL 170
Query: 182 YKNGFGYGDLWDASLAYGF-DRSAEVSA---GVYL-PRFK---GLVTPMTARVFLQSQDW 233
++N FG + + + + G RSA +A ++ P F+ G + T + + ++
Sbjct: 171 WRNVFGGAENLNFNASLGTRTRSAYQAAFDTPIFSDPDFRLELGGIASSTQKTWASHEEV 230
Query: 234 LKFSSYKEQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYT 293
LK K + L S G + H++ Y+ WR +T + +S TVR G SS+ ++
Sbjct: 231 LKGGWSKLRWLSRS-G----QRHEIGYSGFWRQVTGLADNASPTVRANAGDSVKSSVFHS 285
Query: 294 FKFDKRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPF------GFYRT 347
+ D+R++P P+RGY + ++ G P + F + E + + A+P G
Sbjct: 286 WTTDRRDNPFLPSRGYYAKAFNELAGWGPLKGDVAFWKSEIETQSAIPIPIPGVKGDSGV 345
Query: 348 ALNFGISSGVVLPIGRDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEP 407
+ G +G++ P+ D S S P L+ LGGP+ + GF+ GLGP +
Sbjct: 346 SFTTGFRAGLLYPLSLD----SDSRPRL----SRLNDRFQLGGPTDVRGFRLSGLGPRDG 397
Query: 408 RRQVRGDSSDENADASERDF----LGGD--LAVSAFADLSFDLPLRWFREKGIHGHLFAC 461
V GD A ++ F +G + L + AF + LPLR ++ +
Sbjct: 398 TDAVGGDVYA--AGSANLLFPVPRVGAEKPLRLQAFVNGGRLLPLRNAQKAAPSSS--SE 453
Query: 462 AGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVF--PTNLFRLEVNYCRILKKSSHDHGK 519
+ K T +E N LP + G G+V+ P F L ++ +L+K + G+
Sbjct: 454 VKDAMKFTLSEIGN-GLPSI------AAGVGLVYAHPAARFELNISLPLVLRKG--EEGR 504
Query: 520 NGIQISL 526
G+Q+ +
Sbjct: 505 KGLQLGI 511
>MGI|MGI:1915903 [details] [associations]
symbol:Samm50 "sorting and assembly machinery component 50
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0001401
"mitochondrial sorting and assembly machinery complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0019867 "outer membrane"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=ISO] InterPro:IPR000184 Pfam:PF01103
MGI:MGI:1915903 GO:GO:0016021 GO:GO:0005743 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 CTD:25813 GeneTree:ENSGT00390000011355
OMA:DTRNSSI HOVERGEN:HBG054614 OrthoDB:EOG4H72BD EMBL:AK039949
EMBL:BC119180 EMBL:BC119178 EMBL:AK159740 EMBL:AK161378
EMBL:AK167806 EMBL:AK169351 EMBL:AK169066 EMBL:AK168510
EMBL:AK144975 EMBL:AK084395 EMBL:AK041783 IPI:IPI00221608
RefSeq:NP_848729.1 UniGene:Mm.290725 ProteinModelPortal:Q8BGH2
SMR:Q8BGH2 IntAct:Q8BGH2 STRING:Q8BGH2 PhosphoSite:Q8BGH2
REPRODUCTION-2DPAGE:Q8BGH2 PaxDb:Q8BGH2 PRIDE:Q8BGH2
Ensembl:ENSMUST00000023071 GeneID:68653 KEGG:mmu:68653
UCSC:uc007xbx.1 HOGENOM:HOG000015411 InParanoid:Q8BGH2
NextBio:327634 Bgee:Q8BGH2 Genevestigator:Q8BGH2 Uniprot:Q8BGH2
Length = 469
Score = 232 (86.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 83/312 (26%), Positives = 143/312 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGEVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 HGEDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F +
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPL 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG F
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALF 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + F++++F+L+ P + + + G+++PIG D +S
Sbjct: 280 KVNQELAGYTGGD--VSFIKEDFELQLNKPLAL-DSVFSTSLWGGMLVPIG-D---KPSS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 87/335 (25%), Positives = 128/335 (38%)
Query: 209 GVYLPRFKGLVTPMTARVFLQSQDW-LKFSSYKEQSLGLSLGLFSIRHHDLVYNLAWRTL 267
G+ LP G +T + +++ S +K Q FS+ + + W +L
Sbjct: 146 GLKLPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQPGNFERN-FSVNLYKVTGQFPWSSL 204
Query: 268 --TD---------PSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSP---LRPTRGYAFVS 313
TD P +S+TV+ + L L T F R L+ + +A V
Sbjct: 205 RETDRGVSAEYSFPLWKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVI 264
Query: 314 TTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTSLP 373
++ + P L + QE F + ++ P+ D + STSL
Sbjct: 265 DSRNSSILPRRGALFKVNQELAGYTGGDVSFIKEDFELQLNK----PLALDSV-FSTSL- 318
Query: 374 ERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGGDLA 433
GG L PI PS++ G GP VRG S SE D+LGG+
Sbjct: 319 ----WGGMLVPIGDK--PSSIADRFYLG-GPTS----VRGFSMHSIGPQSEGDYLGGEAY 367
Query: 434 VSAFADLSFDLPLR----WFREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSV 489
+ L LP R F E H F AGN+ L E + K + R S
Sbjct: 368 WAGGLHLYTPLPFRPGQGGFGEL-FRTHFFLNAGNLCNLNYGEGPKAHIRKLAECIRWSY 426
Query: 490 GAGIVFPT-NLFRLEVNYCRILKKSSHDHGKNGIQ 523
GAG+V N+ RLE+NYC + D +G+Q
Sbjct: 427 GAGVVLRLGNIARLELNYCIPMGVQGGDRICDGVQ 461
>UNIPROTKB|F6UPR4 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019867 "outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
GeneTree:ENSGT00390000011355 EMBL:AAEX03007251 EMBL:AAEX03007252
Ensembl:ENSCAFT00000001384 Uniprot:F6UPR4
Length = 456
Score = 225 (84.3 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 84/312 (26%), Positives = 142/312 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + F++++F+L+ F + + + GV++PIG D +S
Sbjct: 280 KVNQELAGYTGGD--VSFIKEDFELQLNKQLVF-DSVFSTSLWGGVLVPIG-D---KPSS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 57/167 (34%), Positives = 72/167 (43%)
Query: 352 GISSGVVLPIGRDF-LRMSTSLP-ERFFL----GGNLSPICSLGGPSALWGFKTRGLGPA 405
G + G V I DF L+++ L + F GG L PI PS++ G GP
Sbjct: 287 GYTGGDVSFIKEDFELQLNKQLVFDSVFSTSLWGGVLVPIGDK--PSSIADRFYLG-GPT 343
Query: 406 EPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLR----WFREKGIHGHLFAC 461
VRG S SE D+LGG+ + L LP R F E H F
Sbjct: 344 S----VRGFSMHSVGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGEL-FRTHFFLN 398
Query: 462 AGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPT-NLFRLEVNYC 507
AGN+ L E + K + R S GAGIV N+ RLE+NYC
Sbjct: 399 AGNLCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYC 445
>UNIPROTKB|Q9Y512 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9606 "Homo sapiens" [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006626 "protein targeting to mitochondrion"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IDA]
[GO:0001401 "mitochondrial sorting and assembly machinery complex"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005741
"mitochondrial outer membrane" evidence=IDA] [GO:0045040 "protein
import into mitochondrial outer membrane" evidence=IDA]
Reactome:REACT_17015 InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021
GO:GO:0005743 EMBL:CH471138 GO:GO:0044267 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 EMBL:AL035398 CTD:25813 OMA:DTRNSSI
EMBL:AF151809 EMBL:AY189688 EMBL:AK001087 EMBL:CR456483
EMBL:AK222657 EMBL:BC007830 EMBL:BC011681 EMBL:BC015200
IPI:IPI00412713 RefSeq:NP_056195.3 UniGene:Hs.505824
ProteinModelPortal:Q9Y512 SMR:Q9Y512 IntAct:Q9Y512
MINT:MINT-1451034 STRING:Q9Y512 PhosphoSite:Q9Y512 DMDM:118572715
PaxDb:Q9Y512 PeptideAtlas:Q9Y512 PRIDE:Q9Y512 DNASU:25813
Ensembl:ENST00000350028 GeneID:25813 KEGG:hsa:25813 UCSC:uc003bej.3
GeneCards:GC22P044342 HGNC:HGNC:24276 HPA:HPA034537 MIM:612058
neXtProt:NX_Q9Y512 PharmGKB:PA142670954 HOVERGEN:HBG054614
OrthoDB:EOG4H72BD PhylomeDB:Q9Y512 ChiTaRS:SAMM50 GenomeRNAi:25813
NextBio:47039 ArrayExpress:Q9Y512 Bgee:Q9Y512 CleanEx:HS_SAMM50
Genevestigator:Q9Y512 GermOnline:ENSG00000100347 Uniprot:Q9Y512
Length = 469
Score = 225 (84.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 83/312 (26%), Positives = 141/312 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + PR + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPRPGNFERNFSVNLYKVTGQF-PWSSLRETDRGMSAEYSFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + F++++F+L+ + + + G+++PIG D +S
Sbjct: 280 KVNQELAGYTGGD--VSFIKEDFELQLNKQL-IFDSVFSASFWGGMLVPIG-D---KPSS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 128 (50.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 60/183 (32%), Positives = 79/183 (43%)
Query: 352 GISSGVVLPIGRDF-LRMSTSL--PERF---FLGGNLSPICSLGGPSALWGFKTRGLGPA 405
G + G V I DF L+++ L F F GG L PI PS++ G GP
Sbjct: 287 GYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDK--PSSIADRFYLG-GPT 343
Query: 406 EPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLR----WFREKGIHGHLFAC 461
+RG S SE D+LGG+ + L LP R F E H F
Sbjct: 344 S----IRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGEL-FRTHFFLN 398
Query: 462 AGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPT-NLFRLEVNYCRILKKSSHDHGKN 520
AGN+ L E + K + R S GAGIV N+ RLE+NYC + + D +
Sbjct: 399 AGNLCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICD 458
Query: 521 GIQ 523
G+Q
Sbjct: 459 GVQ 461
>RGD|1303219 [details] [associations]
symbol:Samm50 "sorting and assembly machinery component 50
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0001401 "mitochondrial sorting and assembly machinery complex"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005741 "mitochondrial outer membrane" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA;ISO] [GO:0045040
"protein import into mitochondrial outer membrane"
evidence=IEA;ISO] InterPro:IPR000184 Pfam:PF01103 RGD:1303219
GO:GO:0016021 GO:GO:0005743 eggNOG:COG4775 GO:GO:0045040
GO:GO:0001401 CTD:25813 GeneTree:ENSGT00390000011355
HOVERGEN:HBG054614 OrthoDB:EOG4H72BD HOGENOM:HOG000015411
EMBL:BC079302 IPI:IPI00372941 RefSeq:NP_001004241.1
UniGene:Rn.12611 ProteinModelPortal:Q6AXV4 STRING:Q6AXV4
PhosphoSite:Q6AXV4 PRIDE:Q6AXV4 DNASU:300111
Ensembl:ENSRNOT00000016520 GeneID:300111 KEGG:rno:300111
InParanoid:Q6AXV4 NextBio:646352 Genevestigator:Q6AXV4
Uniprot:Q6AXV4
Length = 469
Score = 225 (84.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 82/312 (26%), Positives = 143/312 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLERTKDDIIICEIGEVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 HGEDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F +
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFEKNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPL 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L + +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 CKTSHTVKWEGVWRELGCLARTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + F++++F+L+ P + + + G+++PIG D L +S
Sbjct: 280 KVNQELAGYTGGD--VSFIKEDFELQLNKPL-VLDSVFSTSLWGGMLVPIG-DKL---SS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 87/340 (25%), Positives = 130/340 (38%)
Query: 209 GVYLPRFKGLVTPMTARVFLQSQDW-LKFSSYKEQSLGLSLGLFSIRHHDLVYNLAWRTL 267
G+ LP G +T + +++ S +K Q FS+ + + W +L
Sbjct: 146 GLKLPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQPGNFEKN-FSVNLYKVTGQFPWSSL 204
Query: 268 --TD---------PSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSP---LRPTRGYAFVS 313
TD P +S+TV+ + L L T F R L+ + +A V
Sbjct: 205 RETDRGVSAEYSFPLCKTSHTVKWEGVWRELGCLARTASFAVRKESGHSLKSSLSHAMVI 264
Query: 314 TTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTSLP 373
++ + P L + QE F + ++ +VL D + STSL
Sbjct: 265 DSRNSSILPRRGALLKVNQELAGYTGGDVSFIKEDFELQLNKPLVL----DSV-FSTSLW 319
Query: 374 ERFF--LGGNLSPICS---LGGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFL 428
+G LS I LGGP+++ GF +GP SE D+L
Sbjct: 320 GGMLVPIGDKLSSIADRFYLGGPTSVRGFSMHSIGPQ-----------------SEGDYL 362
Query: 429 GGDLAVSAFADLSFDLPLR----WFREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQS 484
GG+ + L LP R F E H F AGN+ L E + K +
Sbjct: 363 GGEAYWAGGLHLYTPLPFRPGQGGFGEL-FRTHFFLNAGNLCNLNYGEGPRAHIRKLAEC 421
Query: 485 TRSSVGAGIVFPT-NLFRLEVNYCRILKKSSHDHGKNGIQ 523
R S GAGIV N+ RLE+NYC + D +G+Q
Sbjct: 422 IRWSYGAGIVLRLGNIARLELNYCIPMGVQRGDRICDGVQ 461
>UNIPROTKB|E2QSZ0 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045040 "protein import into mitochondrial
outer membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0001401 "mitochondrial sorting and assembly
machinery complex" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
GO:GO:0005743 GO:GO:0045040 GO:GO:0001401 CTD:25813
GeneTree:ENSGT00390000011355 EMBL:AAEX03007251 EMBL:AAEX03007252
RefSeq:XP_531702.3 Ensembl:ENSCAFT00000001384
Ensembl:ENSCAFT00000047071 GeneID:474473 KEGG:cfa:474473
NextBio:20850481 Uniprot:E2QSZ0
Length = 469
Score = 225 (84.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 84/312 (26%), Positives = 142/312 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + F++++F+L+ F + + + GV++PIG D +S
Sbjct: 280 KVNQELAGYTGGD--VSFIKEDFELQLNKQLVF-DSVFSTSLWGGVLVPIG-D---KPSS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 60/183 (32%), Positives = 78/183 (42%)
Query: 352 GISSGVVLPIGRDF-LRMSTSLP-ERFFL----GGNLSPICSLGGPSALWGFKTRGLGPA 405
G + G V I DF L+++ L + F GG L PI PS++ G GP
Sbjct: 287 GYTGGDVSFIKEDFELQLNKQLVFDSVFSTSLWGGVLVPIGDK--PSSIADRFYLG-GPT 343
Query: 406 EPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLR----WFREKGIHGHLFAC 461
VRG S SE D+LGG+ + L LP R F E H F
Sbjct: 344 S----VRGFSMHSVGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGEL-FRTHFFLN 398
Query: 462 AGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPT-NLFRLEVNYCRILKKSSHDHGKN 520
AGN+ L E + K + R S GAGIV N+ RLE+NYC + D +
Sbjct: 399 AGNLCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQKGDRTCD 458
Query: 521 GIQ 523
G+Q
Sbjct: 459 GVQ 461
>ZFIN|ZDB-GENE-040426-806 [details] [associations]
symbol:samm50 "sorting and assembly machinery
component 50 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0019867 "outer membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
ZFIN:ZDB-GENE-040426-806 GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775
CTD:25813 OrthoDB:EOG4H72BD HOGENOM:HOG000015411 EMBL:BC044493
IPI:IPI00488752 RefSeq:NP_956436.1 UniGene:Dr.80333
ProteinModelPortal:Q803G5 STRING:Q803G5 PRIDE:Q803G5 GeneID:393111
KEGG:dre:393111 InParanoid:Q803G5 NextBio:20814184
ArrayExpress:Q803G5 Uniprot:Q803G5
Length = 469
Score = 222 (83.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 78/312 (25%), Positives = 146/312 (46%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V + G +TK+ ++ E+ + +A + ++++ ++ KL L F VE+ +D+
Sbjct: 47 VQHVHIDGLGRTKEDILTYEIADVFHAKNLIDVMKKSHEARQKLLRLGIFRHVEVVIDTA 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + ++G T G + S V G +K N G +
Sbjct: 107 EGADALPNGLDVTFEVRELRR-MTGSYNTMV-GNNEGSMVLG-IKLPNVLGRAEKLTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S + F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGHFERNFSLNLYKVTGQF-PWSSLRETDRGVSAEISFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H L + WR L + +S VR + GH SSL + D RNS + P +G
Sbjct: 220 WRTSHTLKWEGVWRELGCLARTASFAVREESGHSLKSSLAHAMVIDTRNSTILPRKGALL 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + FL+++F+++ F+ + L+ + G++LP+G ++S
Sbjct: 280 KINQELAGYTGGD--VSFLKEDFEIQLNKTL-FWDSVLSTSLWGGMLLPLGEK----ASS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 147 (56.8 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 57/196 (29%), Positives = 89/196 (45%)
Query: 329 FLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTSLPERFFLGGNLSPICSL 388
FL+++F+++ F+ + L+ + G++LP+G ++S+ +RF+LGG
Sbjct: 295 FLKEDFEIQLNKTL-FWDSVLSTSLWGGMLLPLGEK----ASSIADRFYLGG-------- 341
Query: 389 GGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLRW 448
P+++ GF +GP Q GD E + GG V + L F
Sbjct: 342 --PTSVRGFSMYSIGP-----QSEGDYL-----GGEAYWAGG---VHLYTPLPFRPGRGG 386
Query: 449 FREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPT-NLFRLEVNYC 507
F + H F AGN+ L E L K + R S GAGIV N+ RLE+NYC
Sbjct: 387 FGDL-FRTHFFLNAGNLCNLNYGEGPRAHLSKLAECIRWSYGAGIVLRLGNIARLELNYC 445
Query: 508 RILKKSSHDHGKNGIQ 523
+ S D +G+Q
Sbjct: 446 IPMGVQSGDRICDGVQ 461
>UNIPROTKB|G4N9M6 [details] [associations]
symbol:MGG_09978 "Sorting assembly machinery 50 kDa
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
EMBL:CM001234 RefSeq:XP_003717533.1 ProteinModelPortal:G4N9M6
EnsemblFungi:MGG_09978T0 GeneID:2680964 KEGG:mgr:MGG_09978
Uniprot:G4N9M6
Length = 518
Score = 222 (83.2 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 91/340 (26%), Positives = 152/340 (44%)
Query: 92 DCLIEAELDAIRNA-TTMQEIIQAANIINYKLRELECFDSV-EITLDSGPPELPGTS--- 146
D +++ +D NA TT+ +++ + KL + F EI L S P +
Sbjct: 74 DPIVKPLVDDENNAATTLGDVLGRLETVTTKLARFDLFKKEPEIWLSSAGESDPLAAVTD 133
Query: 147 -NVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASLAYGFDRSAE 205
N+ I+V E + L + GT G+ + S G+L +N FG + + + G R+
Sbjct: 134 LNIDIKVTE-RGRLMLKTGT-DLGDTEGSAY-GNLLLRNVFGGAETLSLNASAG-TRTRS 189
Query: 206 VSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKE--QSLGLSLGLFSIRH--HDLVYN 261
+ V+ + L S ++S++E +S L L S H
Sbjct: 190 AYSAVFATPINSNPDYRFSLEALTSATEKPWASHEEVTKSATARLALVSASGDTHSFAAG 249
Query: 262 LAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAFVSTTQIGGLA 321
AWR +T + +S +VR G +SL++ F D+R++PL P GY +T+++ G
Sbjct: 250 EAWRQVTGLAAKASPSVRTDAGDSVKTSLQHIFTRDRRDNPLMPQSGYLLRTTSELAGWG 309
Query: 322 PDSRCLRFLRQEFDLRFAVPF---GFY--RTALNFG--ISSGVVLPIGRDFLRMSTSLPE 374
P + F + E +L AVP G +T ++FG G++ P+ + S +LP
Sbjct: 310 PLGGDVSFSKSEMELVGAVPVTLPGLNSKKTGISFGAGFKMGMLYPLPLGYSLSSRALPS 369
Query: 375 RFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRGD 414
R ++ LGGP+ + GFK GLGP + V GD
Sbjct: 370 R------INDRFQLGGPTDVRGFKIGGLGPRDGADAVGGD 403
>UNIPROTKB|G3MZZ3 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9913 "Bos taurus" [GO:0045040 "protein import into
mitochondrial outer membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=IEA] InterPro:IPR000184
Pfam:PF01103 GO:GO:0005743 GO:GO:0045040 GO:GO:0001401
GeneTree:ENSGT00390000011355 OMA:DTRNSSI EMBL:DAAA02014865
EMBL:DAAA02014866 EMBL:DAAA02014867 Ensembl:ENSBTAT00000063243
Uniprot:G3MZZ3
Length = 469
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 84/314 (26%), Positives = 141/314 (44%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIMYEIRDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTAR--VFLQSQDWLKFSSYKEQSLGLSLGL-F 251
+YG + E S G+ + P+ + ++ W SS QS+G+S F
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFDRNFSVNDHTIMEMFPW---SSLGGQSIGVSASTSF 217
Query: 252 SI--RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGY 309
H + + WR L S ++S VR++ GH SSL ++ D RNS + P RG
Sbjct: 218 PTWKTSHTVKWEGVWRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGA 277
Query: 310 AFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMS 369
++ G + FL+++F+L+ T + + G+++P+G D
Sbjct: 278 LLKVNQELAGYTGGD--VSFLKEDFELQLNKQL-ILDTVFSASLWGGMLVPMG-D---KP 330
Query: 370 TSLPERFFLGGNLS 383
+S+ +RF+LGG S
Sbjct: 331 SSIADRFYLGGPTS 344
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 55/196 (28%), Positives = 85/196 (43%)
Query: 329 FLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTSLPERFFLGGNLSPICSL 388
FL+++F+L+ T + + G+++P+G D +S+ +RF+LGG
Sbjct: 295 FLKEDFELQLNKQL-ILDTVFSASLWGGMLVPMG-D---KPSSIADRFYLGG-------- 341
Query: 389 GGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLRW 448
P+++ GF +GP Q GD E + GG + + L F
Sbjct: 342 --PTSVRGFSMHSVGP-----QSEGDYL-----GGEAYWAGG---LHLYTPLPFRPGQGG 386
Query: 449 FREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPT-NLFRLEVNYC 507
F E H F AGN+ L E + K + R S GAGIV N+ RLE+NYC
Sbjct: 387 FGEL-FRTHFFLNAGNLCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYC 445
Query: 508 RILKKSSHDHGKNGIQ 523
+ D +G+Q
Sbjct: 446 VPMGVQRGDRICDGVQ 461
>UNIPROTKB|Q2HJ55 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9913 "Bos taurus" [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021
GO:GO:0005741 EMBL:BT025460 EMBL:BC113305 IPI:IPI00705726
RefSeq:NP_001040088.1 UniGene:Bt.1696 ProteinModelPortal:Q2HJ55
DNASU:618777 GeneID:618777 KEGG:bta:618777 CTD:25813
NextBio:20901345 Uniprot:Q2HJ55
Length = 469
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 82/312 (26%), Positives = 142/312 (45%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIMYEIRDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFDRNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPT 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S ++S VR++ GH SSL ++ D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGALL 279
Query: 312 VSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTS 371
++ G + FL+++F+L+ T + + G+++P+G D +S
Sbjct: 280 KVNQELAGYTGGD--VSFLKEDFELQLNKQL-ILDTVFSASLWGGMLVPMG-D---KPSS 332
Query: 372 LPERFFLGGNLS 383
+ +RF+LGG S
Sbjct: 333 IADRFYLGGPTS 344
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 55/196 (28%), Positives = 85/196 (43%)
Query: 329 FLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTSLPERFFLGGNLSPICSL 388
FL+++F+L+ T + + G+++P+G D +S+ +RF+LGG
Sbjct: 295 FLKEDFELQLNKQL-ILDTVFSASLWGGMLVPMG-D---KPSSIADRFYLGG-------- 341
Query: 389 GGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLRW 448
P+++ GF +GP Q GD E + GG + + L F
Sbjct: 342 --PTSVRGFSMHSVGP-----QSEGDYL-----GGEAYWAGG---LHLYTPLPFRPGQGG 386
Query: 449 FREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPT-NLFRLEVNYC 507
F E H F AGN+ L E + K + R S GAGIV N+ RLE+NYC
Sbjct: 387 FGEL-FRTHFFLNAGNLCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYC 445
Query: 508 RILKKSSHDHGKNGIQ 523
+ D +G+Q
Sbjct: 446 VPMGVQRGDRICDGVQ 461
>UNIPROTKB|Q0C1B3 [details] [associations]
symbol:bamA "Outer membrane protein assembly factor BamA"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
GO:GO:0051205 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_760480.1
ProteinModelPortal:Q0C1B3 STRING:Q0C1B3 GeneID:4288468
KEGG:hne:HNE_1776 PATRIC:32216379 HOGENOM:HOG000007232 OMA:IEPRITR
ProtClustDB:CLSK890668 BioCyc:HNEP228405:GI69-1804-MONOMER
Uniprot:Q0C1B3
Length = 854
Score = 135 (52.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 267 LTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAFVSTTQIGGLAPDSRC 326
+ +P ++ NT+ R D S + Y F +D+ N P+ PTRG+ + + GL D
Sbjct: 596 ICNPGYVLRNTICRSERSDISSIVGYDFFWDQTNDPISPTRGFNLRFSQDLAGLGGD--- 652
Query: 327 LRFLRQEFDLRFAVPFGFYRTAL-NFGISSGVVLPIGRDFLRMSTSLPERFFLGGNLSPI 385
++++R E F G +R + + S G+V+P+ + + RFF GG
Sbjct: 653 VKYIRTETGASFYR--GIWRDVVASANFSGGLVVPLDEE---QGVRINNRFFRGG----- 702
Query: 386 CSLGGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGG--------DLAVSAF 437
S GF GLGP E R + ++ E + LGG +L V F
Sbjct: 703 ------STFRGFDVAGLGPREILRLI-DPATGELLGTQRLNSLGGNAYYQGTFELTVPNF 755
Query: 438 ADLSFDLPLRWFREKGIHGHLFAC-AGNVAKLTENEYRNFSLPKFLQST------RSSVG 490
+ + F + G G L G+ L + + +++T R+S G
Sbjct: 756 VPEEYGIKSALFLDVGSLGLLEDVDKGSTVILEDGGPFGYPGVTAIRTTKDAAALRASAG 815
Query: 491 AGIVFPTNLFRLEVNYCRILKKSSHD 516
+ + + + ++ IL+K +D
Sbjct: 816 ISVFWDSPFGPIRFDFSHILRKEDYD 841
Score = 86 (35.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 47/196 (23%), Positives = 82/196 (41%)
Query: 51 QPQRKSRVDRPKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQE 110
+PQ + +I+ F I GP + + + + GNT+T D +I EL +
Sbjct: 333 RPQISVNEETGRIDITFA-IDEGP-RVYIDRINIVGNTQTLDRVIRREL-RLSEGDAFNR 389
Query: 111 IIQAANIINYKLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKT-PLSGQIGTYTKG 169
I+ + ++R L F+ VE+ P E P + V I+V E T LS G ++
Sbjct: 390 ILLDRS--RNRVRALGFFEDVEVV--ETPSEQPDRTIVDIKVKEQSTGELSFAAG-FSSV 444
Query: 170 EAKSSTVEGSLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQ 229
+A + S + G G + SL+ R V PRF +F
Sbjct: 445 DAYLFDLSASQRNLRGRGQSVVARTSLS---SRQQIVDLRFTEPRFLDRNLSAGVDLFAT 501
Query: 230 SQDWLKFSSYKEQSLG 245
QD+ +++ + +++G
Sbjct: 502 RQDFEEYTGFTSETIG 517
Score = 45 (20.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 36/158 (22%), Positives = 64/158 (40%)
Query: 58 VDRPKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANI 117
+DR + + + + N P+ ++ VI +GN KD + E+ A I AA +
Sbjct: 89 IDRRGNDLVIQVVEN-PI---INRVIFEGNRALKDDKLREEIQAAPRG-----IFTAARV 139
Query: 118 INYKLRELECFD-SVEITLDSGPPELPGTSNVIIQVVE-TKTPLSGQ-----IGT--YTK 168
+ R +E + S P P N + + E T+ P++G IG Y+
Sbjct: 140 QSDVQRIMELYRRSGRFAAKVEPQYKPLEQNRVDLIFEVTEGPVTGVRSINFIGNKAYSD 199
Query: 169 GEAKSSTVEGSLKYKNGFGYGDLWDAS-LAYGFDRSAE 205
+S V + F D +D++ L Y ++ E
Sbjct: 200 SRLRSEIVTKQSRLWRFFSSNDNYDSNRLEYDREQLRE 237
>WB|WBGene00001662 [details] [associations]
symbol:gop-3 species:6239 "Caenorhabditis elegans"
[GO:0019867 "outer membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0005741 GO:GO:0000003 EMBL:FO080774 eggNOG:COG4775
EMBL:AY052771 PIR:T15758 RefSeq:NP_498119.1 UniGene:Cel.19335
ProteinModelPortal:P46576 STRING:P46576 PaxDb:P46576
EnsemblMetazoa:C34E10.1.1 EnsemblMetazoa:C34E10.1.2
EnsemblMetazoa:C34E10.1.3 GeneID:175723 KEGG:cel:CELE_C34E10.1
UCSC:C34E10.1.2 CTD:175723 WormBase:C34E10.1
GeneTree:ENSGT00390000011355 HOGENOM:HOG000154249 InParanoid:P46576
OMA:DASFVKN NextBio:889368 Uniprot:P46576
Length = 434
Score = 136 (52.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 71/293 (24%), Positives = 126/293 (43%)
Query: 69 RIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECF 128
R + VP V V G TK+ + E+ + + + E++ +++ L+E+
Sbjct: 13 RAKASGVPSIVEAVQFHGVRITKNDALVKEVSELYRSKNLDELVHNSHLAARHLQEVGLM 72
Query: 129 DSVEITLDSGPPELPG-TSNVIIQVVETKTPLSG-QIGTYTKGEAKSSTVEGSLKYKNGF 186
D+ +D+ P G N +++ E K+ +G + G T G+A S G K G
Sbjct: 73 DNAVALIDTSPSSNEGYVVNFLVR--EPKSFTAGVKAGVSTNGDADVSLNAG--KQSVG- 127
Query: 187 GYGDLWDASLAYGF--DRSAEVSAGVYLPRFKGL--VTPMTARVF--LQSQDWLKFSSYK 240
G G+ + Y D +SA + F G + ++A ++ L W + S
Sbjct: 128 GRGEAINTQYTYTVKGDHCFNISA---IKPFLGWQKYSNVSATLYRSLAHMPWNQ-SDVD 183
Query: 241 EQSLGLSLG--LFSIRH-HDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFD 297
E + L+ L++ + H + N WRTL + ++ +VR Q GH SL+ D
Sbjct: 184 ENAAVLAYNGQLWNQKLLHQVKLNAIWRTLR-ATRDAAFSVREQAGHTLKFSLENAVAVD 242
Query: 298 KRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFA--VPFGFYRTA 348
R+ P+ +RG + G+ D+ F++ DL+ A +P GF A
Sbjct: 243 TRDRPILASRGILARFAQEYAGVFGDAS---FVKNTLDLQAAAPLPLGFILAA 292
Score = 75 (31.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 34/119 (28%), Positives = 52/119 (43%)
Query: 408 RRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAK 467
++ VRG + ++ LGG +++ L PL + H F +G+VA
Sbjct: 318 QQDVRGFGLNTIGVKADNSCLGGGASLAGVVHLY--RPL--IPPNMLFAHAFLASGSVAS 373
Query: 468 LTENEYRNFSLPKFLQST-RSSVGAGIVFP-TNLFRLEVNYCRILKKSSHDHGKNGIQI 524
+ +L + LQ T R S G G+ F ++FRLE+NY LK D G I
Sbjct: 374 VHSK-----NLVQQLQDTQRVSAGFGLAFVFKSIFRLELNYTYPLKYVLGDSLLGGFHI 427
>CGD|CAL0004681 [details] [associations]
symbol:SAM50 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0031307 "integral to
mitochondrial outer membrane" evidence=IEA] [GO:0001401
"mitochondrial sorting and assembly machinery complex"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0015266 "protein channel activity" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 CGD:CAL0004681 GO:GO:0005886
EMBL:AACQ01000066 GO:GO:0019867 eggNOG:COG4775 RefSeq:XP_716599.1
ProteinModelPortal:Q5A4H6 STRING:Q5A4H6 GeneID:3641721
KEGG:cal:CaO19.7358 Uniprot:Q5A4H6
Length = 507
Score = 132 (51.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 79/374 (21%), Positives = 156/374 (41%)
Query: 63 IENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQ--EIIQAANIINY 120
+E+LF+ ++ P+ +R +V + +D ++ + + N M ++ N I+
Sbjct: 56 LESLFQDHKHQPIKIR--NVQITNGQLYRDEFLKYQFRNLLNGEIMSLGNYVKNVNQISK 113
Query: 121 KLRELECFDSVEITLDSGPPELPGTSNV-----IIQVVETKTPLSGQIGTYTKGEAKSST 175
L D++++ + P + S + +V +K + GT
Sbjct: 114 DLINSGIIDNLQVVNNLVNPPMFSKSQAYHVVPVFNIVPSKR-FFAKTGTNIGNGEGDGY 172
Query: 176 VEGSLKYKNGFGYGD--LWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDW 233
++ ++KN FG G+ ++DA S ++ + + + ++ DW
Sbjct: 173 IQ--FQFKNLFGGGENLIFDAITGTKTKSSYLLNYNQPIGNNLQYMNENLLLINTRNLDW 230
Query: 234 LKFSSYKEQSLGLSL-----GLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLS 288
L+ S+ + + L G + +H+++ +W+ L + S S V +Q G F S
Sbjct: 231 LQ-SNVTTRGMINKLYTRFHGDITCLNHEIILENSWKILNNHSSKSMQ-VLQQSGSQFKS 288
Query: 289 SLKYTFKFDKRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRF-LRQEFDL-------RFAV 340
S+ Y +D R++ PT+G F QIG D L F L+ ++ +F
Sbjct: 289 SISYNLNYDTRDNKHLPTKGKFF----QIGLEYNDPSILFFKLKNQYPFIKTVTQSQFIH 344
Query: 341 PFGFYRTALNFGISSGVVLPIGRDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTR 400
F F + L G++ P+ +D ++SL +RF++GG P+ + F
Sbjct: 345 RFPFINSNLIITNKFGLLYPLTKD---KNSSLLDRFYIGG----------PNDVRSFLLN 391
Query: 401 GLGPAEPRRQVRGD 414
GLGP + + GD
Sbjct: 392 GLGPKDYNSCIGGD 405
Score = 79 (32.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 40/145 (27%), Positives = 59/145 (40%)
Query: 388 LGGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLR 447
+GGP+ + F GLGP D N+ +GGDL ++ L D+P
Sbjct: 379 IGGPNDVRSFLLNGLGP-----------KDYNS------CIGGDLFLNGGISLITDIPK- 420
Query: 448 WFREKGIHGHLFACAGNVAKLTE-----NEYRNFSLPKFLQSTRS-SVGAGIVFPTNLFR 501
+ E H F G + + N +N +L L S S S G GI+F + R
Sbjct: 421 -YNESNFKIHNFINFGRLVGFNKDISLFNNLQNLNLT--LTSQYSISYGFGILFNHPMAR 477
Query: 502 LEVNYCRILKKSSHDHGKNGIQISL 526
E+N+ L D + GIQ +
Sbjct: 478 FELNFVLPLVTHERDSLRKGIQYGI 502
Score = 41 (19.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 415 SSDENADASERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAKLTE-NEY 473
+ D+N+ +R ++GG V +F L+ P + I G LF G ++ +T+ +Y
Sbjct: 366 TKDKNSSLLDRFYIGGPNDVRSFL-LNGLGPKDY--NSCIGGDLFL-NGGISLITDIPKY 421
Query: 474 R--NFSLPKFLQSTR 486
NF + F+ R
Sbjct: 422 NESNFKIHNFINFGR 436
>UNIPROTKB|Q5A4H6 [details] [associations]
symbol:CaO19.7358 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000184 Pfam:PF01103
CGD:CAL0004681 GO:GO:0005886 EMBL:AACQ01000066 GO:GO:0019867
eggNOG:COG4775 RefSeq:XP_716599.1 ProteinModelPortal:Q5A4H6
STRING:Q5A4H6 GeneID:3641721 KEGG:cal:CaO19.7358 Uniprot:Q5A4H6
Length = 507
Score = 132 (51.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 79/374 (21%), Positives = 156/374 (41%)
Query: 63 IENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQ--EIIQAANIINY 120
+E+LF+ ++ P+ +R +V + +D ++ + + N M ++ N I+
Sbjct: 56 LESLFQDHKHQPIKIR--NVQITNGQLYRDEFLKYQFRNLLNGEIMSLGNYVKNVNQISK 113
Query: 121 KLRELECFDSVEITLDSGPPELPGTSNV-----IIQVVETKTPLSGQIGTYTKGEAKSST 175
L D++++ + P + S + +V +K + GT
Sbjct: 114 DLINSGIIDNLQVVNNLVNPPMFSKSQAYHVVPVFNIVPSKR-FFAKTGTNIGNGEGDGY 172
Query: 176 VEGSLKYKNGFGYGD--LWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDW 233
++ ++KN FG G+ ++DA S ++ + + + ++ DW
Sbjct: 173 IQ--FQFKNLFGGGENLIFDAITGTKTKSSYLLNYNQPIGNNLQYMNENLLLINTRNLDW 230
Query: 234 LKFSSYKEQSLGLSL-----GLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLS 288
L+ S+ + + L G + +H+++ +W+ L + S S V +Q G F S
Sbjct: 231 LQ-SNVTTRGMINKLYTRFHGDITCLNHEIILENSWKILNNHSSKSMQ-VLQQSGSQFKS 288
Query: 289 SLKYTFKFDKRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRF-LRQEFDL-------RFAV 340
S+ Y +D R++ PT+G F QIG D L F L+ ++ +F
Sbjct: 289 SISYNLNYDTRDNKHLPTKGKFF----QIGLEYNDPSILFFKLKNQYPFIKTVTQSQFIH 344
Query: 341 PFGFYRTALNFGISSGVVLPIGRDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTR 400
F F + L G++ P+ +D ++SL +RF++GG P+ + F
Sbjct: 345 RFPFINSNLIITNKFGLLYPLTKD---KNSSLLDRFYIGG----------PNDVRSFLLN 391
Query: 401 GLGPAEPRRQVRGD 414
GLGP + + GD
Sbjct: 392 GLGPKDYNSCIGGD 405
Score = 79 (32.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 40/145 (27%), Positives = 59/145 (40%)
Query: 388 LGGPSALWGFKTRGLGPAEPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLR 447
+GGP+ + F GLGP D N+ +GGDL ++ L D+P
Sbjct: 379 IGGPNDVRSFLLNGLGP-----------KDYNS------CIGGDLFLNGGISLITDIPK- 420
Query: 448 WFREKGIHGHLFACAGNVAKLTE-----NEYRNFSLPKFLQSTRS-SVGAGIVFPTNLFR 501
+ E H F G + + N +N +L L S S S G GI+F + R
Sbjct: 421 -YNESNFKIHNFINFGRLVGFNKDISLFNNLQNLNLT--LTSQYSISYGFGILFNHPMAR 477
Query: 502 LEVNYCRILKKSSHDHGKNGIQISL 526
E+N+ L D + GIQ +
Sbjct: 478 FELNFVLPLVTHERDSLRKGIQYGI 502
Score = 41 (19.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 415 SSDENADASERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAKLTE-NEY 473
+ D+N+ +R ++GG V +F L+ P + I G LF G ++ +T+ +Y
Sbjct: 366 TKDKNSSLLDRFYIGGPNDVRSFL-LNGLGPKDY--NSCIGGDLFL-NGGISLITDIPKY 421
Query: 474 R--NFSLPKFLQSTR 486
NF + F+ R
Sbjct: 422 NESNFKIHNFINFGR 436
>FB|FBgn0033989 [details] [associations]
symbol:CG7639 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0019867 "outer membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 EMBL:AE013599
GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775
GeneTree:ENSGT00390000011355 EMBL:AY071492 EMBL:AY094882
RefSeq:NP_995838.1 UniGene:Dm.19297 ProteinModelPortal:Q9V784
SMR:Q9V784 IntAct:Q9V784 STRING:Q9V784 PaxDb:Q9V784 PRIDE:Q9V784
EnsemblMetazoa:FBtr0087424 GeneID:36675 KEGG:dme:Dmel_CG7639
UCSC:CG7639-RB FlyBase:FBgn0033989 InParanoid:Q9V784 OMA:DTRNSSI
OrthoDB:EOG4Q2BXG PhylomeDB:Q9V784 GenomeRNAi:36675 NextBio:799806
Bgee:Q9V784 GermOnline:CG7639 Uniprot:Q9V784
Length = 443
Score = 127 (49.8 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 61/259 (23%), Positives = 110/259 (42%)
Query: 75 VPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEI-IQAANIINYKLRELECFDSVEI 133
+ RV V V G +T + + D + A+ Q++ ++A + +Y L EL F V +
Sbjct: 21 ISARVDRVNVSGLLRTHNDYVMRAADGLFKASNFQDLMLEAMSTKSY-LHELGIFKDVSV 79
Query: 134 TLD--SGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDL 191
+D G P V + E + G GT G+ + S + L N G G+
Sbjct: 80 HIDVSRGADASPQGYEVTFKGNEMSR-MMGSAGTEI-GQNEGS-LRTELTIPNILGRGEN 136
Query: 192 WDASLAYGFDRSAEVSAGVYLP----RFKGLVTPMTARVFLQSQDWLKFSSYKEQSLG-- 245
+Y R+ ++ + P RFK M+ +F Q+ D SS++ ++G
Sbjct: 137 ISLQGSYSSTRANDLQLKFWKPFFHTRFKENRPEMSFSIFRQT-DRFDISSFQTTNIGYL 195
Query: 246 LSLGLFSIRHHDLVYNLAWRT-LTDPSHMSSNT---VRRQLGHDFLSSLKYTFKFDKRNS 301
+ ++ DL ++L + + D ++ + +R G S L+Y+ +D R+
Sbjct: 196 VDFSAHTMVGVDLTHSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDG 255
Query: 302 PLRPTRGYAFVSTTQIGGL 320
+ PTRG S + GL
Sbjct: 256 NVFPTRGIYLKSVNEYCGL 274
Score = 57 (25.1 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 483 QSTRSSVGAGIVFP-TNLFRLEVNYCRILKKSSHDHGKNGIQISL 526
++ RS+ G G+ R+E+NYC ++ D NG Q +
Sbjct: 394 ENMRSAFGMGLAVKLAERARIELNYCVPVRHQDTDRILNGFQFGI 438
Score = 54 (24.1 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 384 PICSL---GGPSALWGFKTRGLGP 404
PI SL GGP L GFK G GP
Sbjct: 318 PISSLFYCGGPLTLRGFKFGGAGP 341
>UNIPROTKB|A8MZI2 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9606 "Homo sapiens" [GO:0019867 "outer membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 GO:GO:0005743
GO:GO:0019867 EMBL:AL035398 HGNC:HGNC:24276 HOVERGEN:HBG054614
ChiTaRS:SAMM50 IPI:IPI01018135 STRING:A8MZI2
Ensembl:ENST00000396202 ArrayExpress:A8MZI2 Bgee:A8MZI2
Uniprot:A8MZI2
Length = 259
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 256 HDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAFVSTT 315
H + + WR L S +S VR++ GH SSL + D RNS + P RG
Sbjct: 14 HTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQ 73
Query: 316 QIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDFLRMSTSLPER 375
++ G + F++++F+L+ + + + G+++PIG D +S+ +R
Sbjct: 74 ELAGYTGGD--VSFIKEDFELQLNKQL-IFDSVFSASFWGGMLVPIG-D---KPSSIADR 126
Query: 376 FFLGGNLS 383
F+LGG S
Sbjct: 127 FYLGGPTS 134
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/183 (32%), Positives = 79/183 (43%)
Query: 352 GISSGVVLPIGRDF-LRMSTSL--PERF---FLGGNLSPICSLGGPSALWGFKTRGLGPA 405
G + G V I DF L+++ L F F GG L PI PS++ G GP
Sbjct: 77 GYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDK--PSSIADRFYLG-GPT 133
Query: 406 EPRRQVRGDSSDENADASERDFLGGDLAVSAFADLSFDLPLR----WFREKGIHGHLFAC 461
+RG S SE D+LGG+ + L LP R F E H F
Sbjct: 134 S----IRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGEL-FRTHFFLN 188
Query: 462 AGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPT-NLFRLEVNYCRILKKSSHDHGKN 520
AGN+ L E + K + R S GAGIV N+ RLE+NYC + + D +
Sbjct: 189 AGNLCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICD 248
Query: 521 GIQ 523
G+Q
Sbjct: 249 GVQ 251
>UNIPROTKB|Q74AT3 [details] [associations]
symbol:yaeT "Outer membrane protein assembly factor BamA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0051205 KO:K07277
GO:GO:0043165 InterPro:IPR023707 PIRSF:PIRSF006076
TIGRFAMs:TIGR03303 OMA:IEPRITR RefSeq:NP_953317.1
ProteinModelPortal:Q74AT3 GeneID:2687454 KEGG:gsu:GSU2268
PATRIC:22027391 HOGENOM:HOG000017982 ProtClustDB:CLSK828786
BioCyc:GSUL243231:GH27-2244-MONOMER Uniprot:Q74AT3
Length = 765
Score = 120 (47.3 bits), Expect = 0.00087, P = 0.00087
Identities = 90/353 (25%), Positives = 143/353 (40%)
Query: 121 KLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTV---- 176
+L L F+ I+ G E +V I+V E T GT++ G SS
Sbjct: 392 RLMNLGFFEEAAISTVKGSAE--NKLDVNIEVKEKPT------GTFSIGAGYSSLDGLIG 443
Query: 177 EGSLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKF 236
+GS+ N G G + + + G +S+ + G+ P F + ++ +D+L F
Sbjct: 444 QGSVSQGNFLGLGLRANLAASIG-GKSSTFNLGLTDPYFLDTRWTLGGDLYRTERDYLDF 502
Query: 237 SSYKEQSLGLSLGL-FSIRHHDL-VYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTF 294
+ + + G S L VY + + D S + V + SS+ +
Sbjct: 503 TR-RATGGDIKAGYPLSDTLRTLWVYKYEQKEIFDISP-ALRVVPET--NSTTSSIYVSL 558
Query: 295 KFDKRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGIS 354
D + L PTRG + + GL +R FLR D P GF T L+ +
Sbjct: 559 TRDTTDYRLDPTRGMVNNLSVEFAGLGGTNR---FLRYYGDTSVFFPTGF-GTVLSLRGT 614
Query: 355 SGVVLPIG-RDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRG 413
G + +G +D S+ ERFF GG + L GF+ R + P+
Sbjct: 615 LGYIQGLGGKDI-----SIDERFFAGGI----------NTLRGFEGRSVSPSIITYVPTT 659
Query: 414 DSSDENADAS-ERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNV 465
D + ER F+GGD A ++ + +PL ++ G+ G LF AGNV
Sbjct: 660 DPLTGLPTTNPERAFVGGDK--EAILNVEYTIPL--LKDAGLKGVLFFDAGNV 708
Score = 97 (39.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 70/285 (24%), Positives = 113/285 (39%)
Query: 84 VKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDSGPPELP 143
V GNTKT+D +I EL T ++ + +L L F+ I+ G E
Sbjct: 358 VSGNTKTRDKVIRRELKVAEGETYSSTGLKQSK---QRLMNLGFFEEAAISTVKGSAE-- 412
Query: 144 GTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTV----EGSLKYKNGFGYGDLWDASLAYG 199
+V I+V E T GT++ G SS +GS+ N G G + + + G
Sbjct: 413 NKLDVNIEVKEKPT------GTFSIGAGYSSLDGLIGQGSVSQGNFLGLGLRANLAASIG 466
Query: 200 FDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSIRHHDL 258
+S+ + G+ P F + ++ +D+L F+ + + G S L
Sbjct: 467 -GKSSTFNLGLTDPYFLDTRWTLGGDLYRTERDYLDFTR-RATGGDIKAGYPLSDTLRTL 524
Query: 259 -VYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAFVSTTQI 317
VY + + D S + V + SS+ + D + L PTRG + +
Sbjct: 525 WVYKYEQKEIFDISP-ALRVVPET--NSTTSSIYVSLTRDTTDYRLDPTRGMVNNLSVEF 581
Query: 318 GGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIG 362
GL +R FLR D P GF T L+ + G + +G
Sbjct: 582 AGLGGTNR---FLRYYGDTSVFFPTGF-GTVLSLRGTLGYIQGLG 622
Score = 83 (34.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 40/118 (33%), Positives = 54/118 (45%)
Query: 389 GGPSALWGFKTRGLGPAEPRRQVRGDSSDENADAS-ERDFLGGDLAVSAFADLSFDLPLR 447
GG + L GF+ R + P+ D + ER F+GGD A ++ + +PL
Sbjct: 635 GGINTLRGFEGRSVSPSIITYVPTTDPLTGLPTTNPERAFVGGDK--EAILNVEYTIPL- 691
Query: 448 WFREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGI--VFPTNLFRLE 503
++ G+ G LF AGNV EN+ FS S S GAGI V P RLE
Sbjct: 692 -LKDAGLKGVLFFDAGNV--YGENQDM-FS------SVLMSYGAGIRWVSPMGPLRLE 739
>TIGR_CMR|GSU_2268 [details] [associations]
symbol:GSU_2268 "outer membrane protein, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0009279 "cell outer membrane" evidence=ISS]
HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103
Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0051205 KO:K07277
GO:GO:0043165 InterPro:IPR023707 PIRSF:PIRSF006076
TIGRFAMs:TIGR03303 OMA:IEPRITR RefSeq:NP_953317.1
ProteinModelPortal:Q74AT3 GeneID:2687454 KEGG:gsu:GSU2268
PATRIC:22027391 HOGENOM:HOG000017982 ProtClustDB:CLSK828786
BioCyc:GSUL243231:GH27-2244-MONOMER Uniprot:Q74AT3
Length = 765
Score = 120 (47.3 bits), Expect = 0.00087, P = 0.00087
Identities = 90/353 (25%), Positives = 143/353 (40%)
Query: 121 KLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTV---- 176
+L L F+ I+ G E +V I+V E T GT++ G SS
Sbjct: 392 RLMNLGFFEEAAISTVKGSAE--NKLDVNIEVKEKPT------GTFSIGAGYSSLDGLIG 443
Query: 177 EGSLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKF 236
+GS+ N G G + + + G +S+ + G+ P F + ++ +D+L F
Sbjct: 444 QGSVSQGNFLGLGLRANLAASIG-GKSSTFNLGLTDPYFLDTRWTLGGDLYRTERDYLDF 502
Query: 237 SSYKEQSLGLSLGL-FSIRHHDL-VYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTF 294
+ + + G S L VY + + D S + V + SS+ +
Sbjct: 503 TR-RATGGDIKAGYPLSDTLRTLWVYKYEQKEIFDISP-ALRVVPET--NSTTSSIYVSL 558
Query: 295 KFDKRNSPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGIS 354
D + L PTRG + + GL +R FLR D P GF T L+ +
Sbjct: 559 TRDTTDYRLDPTRGMVNNLSVEFAGLGGTNR---FLRYYGDTSVFFPTGF-GTVLSLRGT 614
Query: 355 SGVVLPIG-RDFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRG 413
G + +G +D S+ ERFF GG + L GF+ R + P+
Sbjct: 615 LGYIQGLGGKDI-----SIDERFFAGGI----------NTLRGFEGRSVSPSIITYVPTT 659
Query: 414 DSSDENADAS-ERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNV 465
D + ER F+GGD A ++ + +PL ++ G+ G LF AGNV
Sbjct: 660 DPLTGLPTTNPERAFVGGDK--EAILNVEYTIPL--LKDAGLKGVLFFDAGNV 708
Score = 97 (39.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 70/285 (24%), Positives = 113/285 (39%)
Query: 84 VKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDSGPPELP 143
V GNTKT+D +I EL T ++ + +L L F+ I+ G E
Sbjct: 358 VSGNTKTRDKVIRRELKVAEGETYSSTGLKQSK---QRLMNLGFFEEAAISTVKGSAE-- 412
Query: 144 GTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTV----EGSLKYKNGFGYGDLWDASLAYG 199
+V I+V E T GT++ G SS +GS+ N G G + + + G
Sbjct: 413 NKLDVNIEVKEKPT------GTFSIGAGYSSLDGLIGQGSVSQGNFLGLGLRANLAASIG 466
Query: 200 FDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSIRHHDL 258
+S+ + G+ P F + ++ +D+L F+ + + G S L
Sbjct: 467 -GKSSTFNLGLTDPYFLDTRWTLGGDLYRTERDYLDFTR-RATGGDIKAGYPLSDTLRTL 524
Query: 259 -VYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAFVSTTQI 317
VY + + D S + V + SS+ + D + L PTRG + +
Sbjct: 525 WVYKYEQKEIFDISP-ALRVVPET--NSTTSSIYVSLTRDTTDYRLDPTRGMVNNLSVEF 581
Query: 318 GGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIG 362
GL +R FLR D P GF T L+ + G + +G
Sbjct: 582 AGLGGTNR---FLRYYGDTSVFFPTGF-GTVLSLRGTLGYIQGLG 622
Score = 83 (34.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 40/118 (33%), Positives = 54/118 (45%)
Query: 389 GGPSALWGFKTRGLGPAEPRRQVRGDSSDENADAS-ERDFLGGDLAVSAFADLSFDLPLR 447
GG + L GF+ R + P+ D + ER F+GGD A ++ + +PL
Sbjct: 635 GGINTLRGFEGRSVSPSIITYVPTTDPLTGLPTTNPERAFVGGDK--EAILNVEYTIPL- 691
Query: 448 WFREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGI--VFPTNLFRLE 503
++ G+ G LF AGNV EN+ FS S S GAGI V P RLE
Sbjct: 692 -LKDAGLKGVLFFDAGNV--YGENQDM-FS------SVLMSYGAGIRWVSPMGPLRLE 739
>UNIPROTKB|Q2GD52 [details] [associations]
symbol:bamA "Outer membrane protein assembly factor BamA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
GO:GO:0051205 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_506594.1
ProteinModelPortal:Q2GD52 STRING:Q2GD52 GeneID:3932170
KEGG:nse:NSE_0718 PATRIC:22681451 HOGENOM:HOG000127209 OMA:GVTWYSP
ProtClustDB:CLSK2528112 BioCyc:NSEN222891:GHFU-730-MONOMER
Uniprot:Q2GD52
Length = 744
Score = 115 (45.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 78/327 (23%), Positives = 137/327 (41%)
Query: 78 RVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELEC--FDSVEITL 135
R+ + + GN +T+D +I E+ N ++ Q + + + + R L FD E+ +
Sbjct: 339 RIRKINISGNIRTRDTVIRREMLLSEN-----DLYQPSKVADSRRRILNLGFFD--EVYI 391
Query: 136 DSGPPELPGTSNVIIQVVETKTP-----LSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGD 190
+ + N+I++V + P LSG G+ S VE +L + +
Sbjct: 392 EERKVD---DQNLILEVRVKERPTGTLNLSGGYGSDVGFFGNFSFVENNLFGTSDRLVVE 448
Query: 191 LWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLG----L 246
L ASL G + S E F +T A VF ++++ YK S+G +
Sbjct: 449 LQRASL--GSNYSVEFQRKRIFDTF---ITA-GASVFYKNRNEKANGLYKFSSVGGDGSV 502
Query: 247 SLGLFS-IRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRP 305
S L +R H L Y+L++ + D + +V+R G LS++ Y+ +K ++ P
Sbjct: 503 SYSLRDDLRLH-LGYSLSFDRIFDVDGDAPESVKRSAGTKILSAVSYSLFLNKLDNYFVP 561
Query: 306 TRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDF 365
GY + G+ D ++FLR +F V L+ + +G + +
Sbjct: 562 RYGYGVRFGNKFAGIGGD---VKFLRSDFKAGGFVSIFDQSAVLSLVVRAGNIF----GY 614
Query: 366 LRMSTSLPERFFLGGNLSPICSLG-GP 391
+ RFFL + SLG GP
Sbjct: 615 SGQGVDVANRFFLN-EMRGFDSLGIGP 640
Score = 63 (27.2 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 32/140 (22%), Positives = 62/140 (44%)
Query: 394 LWGFKTRGLGPAEP--RRQVRG-DSSDENA-DASERDFLGGDLAVSAFADLSFDLPLRWF 449
++G+ +G+ A ++RG DS D D LGG+ + A++ +P+R
Sbjct: 611 IFGYSGQGVDVANRFFLNEMRGFDSLGIGPRDVDTGDALGGNSFILGTAEVQ--VPMRLP 668
Query: 450 REKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPTNLFRLEVNYCRI 509
E + F G +A + + + + RSS+GAG+V+ + L V+ +
Sbjct: 669 VELDLKAAFFYEVGTLAGVDVTAEKVYDS----HALRSSIGAGLVWNSPFGVLRVDVAKA 724
Query: 510 LKKSSHDHGKNGIQISLSAP 529
L + D K ++ + +P
Sbjct: 725 LIEGKGDKVKT-VKFGIVSP 743
>TIGR_CMR|NSE_0718 [details] [associations]
symbol:NSE_0718 "outer membrane protein, OMP85 family"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
GO:GO:0051205 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_506594.1
ProteinModelPortal:Q2GD52 STRING:Q2GD52 GeneID:3932170
KEGG:nse:NSE_0718 PATRIC:22681451 HOGENOM:HOG000127209 OMA:GVTWYSP
ProtClustDB:CLSK2528112 BioCyc:NSEN222891:GHFU-730-MONOMER
Uniprot:Q2GD52
Length = 744
Score = 115 (45.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 78/327 (23%), Positives = 137/327 (41%)
Query: 78 RVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELEC--FDSVEITL 135
R+ + + GN +T+D +I E+ N ++ Q + + + + R L FD E+ +
Sbjct: 339 RIRKINISGNIRTRDTVIRREMLLSEN-----DLYQPSKVADSRRRILNLGFFD--EVYI 391
Query: 136 DSGPPELPGTSNVIIQVVETKTP-----LSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGD 190
+ + N+I++V + P LSG G+ S VE +L + +
Sbjct: 392 EERKVD---DQNLILEVRVKERPTGTLNLSGGYGSDVGFFGNFSFVENNLFGTSDRLVVE 448
Query: 191 LWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLG----L 246
L ASL G + S E F +T A VF ++++ YK S+G +
Sbjct: 449 LQRASL--GSNYSVEFQRKRIFDTF---ITA-GASVFYKNRNEKANGLYKFSSVGGDGSV 502
Query: 247 SLGLFS-IRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRP 305
S L +R H L Y+L++ + D + +V+R G LS++ Y+ +K ++ P
Sbjct: 503 SYSLRDDLRLH-LGYSLSFDRIFDVDGDAPESVKRSAGTKILSAVSYSLFLNKLDNYFVP 561
Query: 306 TRGYAFVSTTQIGGLAPDSRCLRFLRQEFDLRFAVPFGFYRTALNFGISSGVVLPIGRDF 365
GY + G+ D ++FLR +F V L+ + +G + +
Sbjct: 562 RYGYGVRFGNKFAGIGGD---VKFLRSDFKAGGFVSIFDQSAVLSLVVRAGNIF----GY 614
Query: 366 LRMSTSLPERFFLGGNLSPICSLG-GP 391
+ RFFL + SLG GP
Sbjct: 615 SGQGVDVANRFFLN-EMRGFDSLGIGP 640
Score = 63 (27.2 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 32/140 (22%), Positives = 62/140 (44%)
Query: 394 LWGFKTRGLGPAEP--RRQVRG-DSSDENA-DASERDFLGGDLAVSAFADLSFDLPLRWF 449
++G+ +G+ A ++RG DS D D LGG+ + A++ +P+R
Sbjct: 611 IFGYSGQGVDVANRFFLNEMRGFDSLGIGPRDVDTGDALGGNSFILGTAEVQ--VPMRLP 668
Query: 450 REKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQSTRSSVGAGIVFPTNLFRLEVNYCRI 509
E + F G +A + + + + RSS+GAG+V+ + L V+ +
Sbjct: 669 VELDLKAAFFYEVGTLAGVDVTAEKVYDS----HALRSSIGAGLVWNSPFGVLRVDVAKA 724
Query: 510 LKKSSHDHGKNGIQISLSAP 529
L + D K ++ + +P
Sbjct: 725 LIEGKGDKVKT-VKFGIVSP 743
>UNIPROTKB|I3LQ32 [details] [associations]
symbol:CGI-51 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019867 "outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
GeneTree:ENSGT00390000011355 Ensembl:ENSSSCT00000024039
Uniprot:I3LQ32
Length = 98
Score = 101 (40.6 bits), Expect = 0.00016, P = 0.00016
Identities = 32/87 (36%), Positives = 40/87 (45%)
Query: 426 DFLGGDLAVSAFADLSFDLPLR----WFREKGIHGHLFACAGNVAKLTENEYRNFSLPKF 481
D+LGG+ + L LP R F E H F AGN+ L E + K
Sbjct: 3 DYLGGEAYWAGGLHLYTPLPFRPGQGGFGEL-FRTHFFLNAGNLCNLNYGEGPKAHIRKL 61
Query: 482 LQSTRSSVGAGIVFPT-NLFRLEVNYC 507
+ R S GAGIV N+ RLE+NYC
Sbjct: 62 AECIRWSYGAGIVLRLGNIARLELNYC 88
>UNIPROTKB|Q5HX37 [details] [associations]
symbol:bamA "Outer membrane protein assembly factor BamA"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0051205
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_178148.1
ProteinModelPortal:Q5HX37 STRING:Q5HX37 GeneID:3230887
KEGG:cjr:CJE0124 PATRIC:20041955 HOGENOM:HOG000104118 OMA:WKRSSIS
ProtClustDB:CLSK872407 BioCyc:CJEJ195099:GJC0-128-MONOMER
Uniprot:Q5HX37
Length = 739
Score = 125 (49.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 69/268 (25%), Positives = 122/268 (45%)
Query: 66 LFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIR-NATTMQEIIQAANIINYKLRE 124
+F+ I + V +R +VI+ GN++T D +I EL N ++ ++ N L+
Sbjct: 334 VFKVIPHDKVYIR--NVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNA----LKR 387
Query: 125 LECFDSVEITLDSGPPELPGTS-NVIIQVVETKT-PLSGQIGTYTKGEAKSSTVEGSLKY 182
FD V I + ++ T ++I+ V E T +SG IG Y G + + SL
Sbjct: 388 TSYFDDVNIKEE----KVDNTHIDLIVDVKEASTGAISGGIG-Y--GSSDGILLNASLSD 440
Query: 183 KNGFGYGDLWDASLAYGFDRSAEVSAG-VYLPRFKGLVTPMTARVFLQSQDWLKFSSYKE 241
N FG G S+ D+S + +G + L + L + + L S D+ ++ +Y E
Sbjct: 441 TNIFGSGIKSSVSV----DKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDY-EWDNYSE 495
Query: 242 QSLG--LSLGLFSIRHHD--LVYNLAWRTLTDPSHMSSNTVRR--QLGHDFLSSLKYTFK 295
++ G +++G R+++ L YNL +D H+S +R +LG SS+
Sbjct: 496 KNYGFDITVGRQFARYYNVSLTYNLEQ---SDIYHLSPTLLRTGYELGKSIKSSITPAIT 552
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGGLAPD 323
F+ + P G ++ + GL D
Sbjct: 553 FNNTDDYYLPRSGIIASTSLEYAGLGGD 580
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 409 RQVRGDSSDENADASE-RDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAK 467
R +RG S + ++ D +GG +A + +LSF PL R K + G +F G + +
Sbjct: 633 RSIRGFESRTVSPKNQWGDEVGGTIAFANSVELSF--PLI-DRIK-LRGSVFFDYGMIGR 688
Query: 468 LTENEYRNFSLPKFLQSTRSSVGAGIVFPTNLFRLEVNYCRILKKSSHDHGKNGIQISL 526
+E + R S G GI + T + L++ + + L D N + +L
Sbjct: 689 KNLDEIK-----------RMSTGIGIEWITPIGPLQLVFAKPLNDKKGDD-TNSFEFNL 735
>TIGR_CMR|CJE_0124 [details] [associations]
symbol:CJE_0124 "outer membrane protein, OMP85 family"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS] HAMAP:MF_01430
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
GO:GO:0016021 GO:GO:0005886 GO:GO:0009279 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0051205 eggNOG:COG4775 KO:K07277
GO:GO:0043165 InterPro:IPR023707 PIRSF:PIRSF006076
TIGRFAMs:TIGR03303 RefSeq:YP_178148.1 ProteinModelPortal:Q5HX37
STRING:Q5HX37 GeneID:3230887 KEGG:cjr:CJE0124 PATRIC:20041955
HOGENOM:HOG000104118 OMA:WKRSSIS ProtClustDB:CLSK872407
BioCyc:CJEJ195099:GJC0-128-MONOMER Uniprot:Q5HX37
Length = 739
Score = 125 (49.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 69/268 (25%), Positives = 122/268 (45%)
Query: 66 LFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIR-NATTMQEIIQAANIINYKLRE 124
+F+ I + V +R +VI+ GN++T D +I EL N ++ ++ N L+
Sbjct: 334 VFKVIPHDKVYIR--NVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNA----LKR 387
Query: 125 LECFDSVEITLDSGPPELPGTS-NVIIQVVETKT-PLSGQIGTYTKGEAKSSTVEGSLKY 182
FD V I + ++ T ++I+ V E T +SG IG Y G + + SL
Sbjct: 388 TSYFDDVNIKEE----KVDNTHIDLIVDVKEASTGAISGGIG-Y--GSSDGILLNASLSD 440
Query: 183 KNGFGYGDLWDASLAYGFDRSAEVSAG-VYLPRFKGLVTPMTARVFLQSQDWLKFSSYKE 241
N FG G S+ D+S + +G + L + L + + L S D+ ++ +Y E
Sbjct: 441 TNIFGSGIKSSVSV----DKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDY-EWDNYSE 495
Query: 242 QSLG--LSLGLFSIRHHD--LVYNLAWRTLTDPSHMSSNTVRR--QLGHDFLSSLKYTFK 295
++ G +++G R+++ L YNL +D H+S +R +LG SS+
Sbjct: 496 KNYGFDITVGRQFARYYNVSLTYNLEQ---SDIYHLSPTLLRTGYELGKSIKSSITPAIT 552
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGGLAPD 323
F+ + P G ++ + GL D
Sbjct: 553 FNNTDDYYLPRSGIIASTSLEYAGLGGD 580
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 409 RQVRGDSSDENADASE-RDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAK 467
R +RG S + ++ D +GG +A + +LSF PL R K + G +F G + +
Sbjct: 633 RSIRGFESRTVSPKNQWGDEVGGTIAFANSVELSF--PLI-DRIK-LRGSVFFDYGMIGR 688
Query: 468 LTENEYRNFSLPKFLQSTRSSVGAGIVFPTNLFRLEVNYCRILKKSSHDHGKNGIQISL 526
+E + R S G GI + T + L++ + + L D N + +L
Sbjct: 689 KNLDEIK-----------RMSTGIGIEWITPIGPLQLVFAKPLNDKKGDD-TNSFEFNL 735
>SGD|S000004971 [details] [associations]
symbol:SAM50 "Essential component of the SAM/TOB complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005741 "mitochondrial
outer membrane" evidence=IEA;IDA] [GO:0015266 "protein channel
activity" evidence=IDA] [GO:0031307 "integral to mitochondrial
outer membrane" evidence=IDA] [GO:0045040 "protein import into
mitochondrial outer membrane" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006461 "protein complex
assembly" evidence=IMP;IPI] [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0019867 "outer membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
Reactome:REACT_85873 InterPro:IPR000184 Pfam:PF01103 SGD:S000004971
GO:GO:0006461 EMBL:BK006947 GO:GO:0031307 Reactome:REACT_118590
eggNOG:COG4775 GO:GO:0045040 GO:GO:0015266 GO:GO:0001401
TCDB:1.B.33.3.1 GeneTree:ENSGT00390000011355 HOGENOM:HOG000170308
OrthoDB:EOG45XC52 EMBL:Z71302 PIR:S62938 RefSeq:NP_014372.1
ProteinModelPortal:P53969 IntAct:P53969 STRING:P53969 PaxDb:P53969
PeptideAtlas:P53969 EnsemblFungi:YNL026W GeneID:855705
KEGG:sce:YNL026W CYGD:YNL026w NextBio:980043 ArrayExpress:P53969
Genevestigator:P53969 GermOnline:YNL026W Uniprot:P53969
Length = 484
Score = 73 (30.8 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 38/163 (23%), Positives = 64/163 (39%)
Query: 364 DFLRMSTSLPERFFLGGNLSPICSLGGPSALWGFKTRGLGPAEPRRQVRGDSSDENADAS 423
DF+ ST++ + NLS SL P + K + GP++ +RG +
Sbjct: 327 DFITFSTTIKTGYLK--NLSSQQSL--PVHICD-KFQSGGPSD----IRGFQTFGLGPRD 377
Query: 424 ERDFLGGDLAVSAFADLSFDLPLRWFREKGIHGHLFACAGNVAKLTENEYRNFSLPKFLQ 483
D +GGD VS + LP + + H F G + N + + +
Sbjct: 378 LYDAVGGDAFVSYGLSVFSRLPWKKVEKSNFRLHWFFNGGKLVNHDNTSLGN-CIGQLSK 436
Query: 484 STRSSVGAGIVFPTNLFRLEVNYCRILKKSSHDHGKNGIQISL 526
+S G G+V + R E+N+ + +D + G Q L
Sbjct: 437 EHSTSTGIGLVLRHPMARFELNFTLPITAHENDLIRKGFQFGL 479
Score = 68 (29.0 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 256 HDLVYNLAWRTL------TDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRG 308
H+ WR+ T +M S T+ Q G + L +TF DKR+ + PT+G
Sbjct: 238 HEWFLETCWRSTKICSQGTSAPYMYSGTMLSQAGDQLRTILGHTFVLDKRDHIMCPTKG 296
Score = 63 (27.2 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 13/48 (27%), Positives = 28/48 (58%)
Query: 76 PLRVHDVIVKGNTKTKDCLIEAELD-AIRNATTMQEIIQAANIINYKL 122
P+RV V+ G +++A LD I + T+ ++++ A+++N +L
Sbjct: 28 PIRVAGVVTTGTDHIDPSVLQAYLDDTIMKSITLGQLVKNADVLNKRL 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 530 502 0.00085 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 619 (66 KB)
Total size of DFA: 283 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.02u 0.09s 39.11t Elapsed: 00:00:02
Total cpu time: 39.03u 0.09s 39.12t Elapsed: 00:00:02
Start: Fri May 10 15:29:51 2013 End: Fri May 10 15:29:53 2013