Query 009628
Match_columns 530
No_of_seqs 397 out of 1993
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 09:27:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 3.8E-46 1.3E-50 389.5 17.5 180 231-506 116-308 (359)
2 3m4x_A NOL1/NOP2/SUN family pr 100.0 2E-42 6.8E-47 371.7 22.0 177 239-511 83-262 (456)
3 3m6w_A RRNA methylase; rRNA me 100.0 3.1E-42 1.1E-46 370.7 21.8 177 239-511 79-258 (464)
4 2frx_A Hypothetical protein YE 100.0 5.9E-42 2E-46 370.3 22.7 177 239-510 93-275 (479)
5 2b9e_A NOL1/NOP2/SUN domain fa 100.0 1.6E-41 5.4E-46 348.0 23.5 183 238-513 79-266 (309)
6 1ixk_A Methyltransferase; open 100.0 9E-41 3.1E-45 342.2 24.7 175 239-510 96-273 (315)
7 2yxl_A PH0851 protein, 450AA l 100.0 1E-39 3.5E-44 349.6 24.9 179 239-511 237-418 (450)
8 1sqg_A SUN protein, FMU protei 100.0 2.3E-39 7.7E-44 344.7 26.2 188 239-526 224-414 (429)
9 3ajd_A Putative methyltransfer 100.0 1.8E-37 6E-42 311.0 19.1 179 239-510 61-239 (274)
10 3id6_C Fibrillarin-like rRNA/T 99.7 5.8E-18 2E-22 166.8 13.3 133 258-508 73-212 (232)
11 4dmg_A Putative uncharacterize 99.7 1.1E-17 3.6E-22 176.7 13.9 176 221-507 176-354 (393)
12 1wxx_A TT1595, hypothetical pr 99.7 8.9E-17 3E-21 168.2 11.7 175 225-508 177-354 (382)
13 2as0_A Hypothetical protein PH 99.6 5E-16 1.7E-20 163.0 13.2 177 225-508 184-364 (396)
14 3c0k_A UPF0064 protein YCCW; P 99.6 3.9E-16 1.3E-20 164.0 10.6 180 221-507 183-367 (396)
15 3v97_A Ribosomal RNA large sub 99.6 7.2E-16 2.5E-20 173.7 13.1 167 221-495 502-670 (703)
16 3lpm_A Putative methyltransfer 99.6 2E-14 6.9E-19 141.6 15.6 164 250-515 37-207 (259)
17 2b78_A Hypothetical protein SM 99.6 4E-15 1.4E-19 156.2 10.9 169 228-502 181-353 (385)
18 2igt_A SAM dependent methyltra 99.6 2.6E-14 8.9E-19 147.4 14.9 103 219-324 110-215 (332)
19 3axs_A Probable N(2),N(2)-dime 99.5 3.9E-15 1.3E-19 157.1 6.8 65 260-324 51-117 (392)
20 3tma_A Methyltransferase; thum 99.5 9.2E-14 3.1E-18 143.4 16.6 140 253-507 195-334 (354)
21 2dul_A N(2),N(2)-dimethylguano 99.5 8.6E-15 2.9E-19 153.7 7.1 63 261-324 47-124 (378)
22 3u81_A Catechol O-methyltransf 99.5 1.4E-13 4.8E-18 132.1 14.9 80 245-324 42-122 (221)
23 1i1n_A Protein-L-isoaspartate 99.5 4E-14 1.4E-18 135.6 9.5 68 255-322 69-143 (226)
24 3mb5_A SAM-dependent methyltra 99.5 1.2E-13 4.1E-18 134.7 12.9 74 249-322 81-155 (255)
25 3tfw_A Putative O-methyltransf 99.5 1.9E-13 6.5E-18 134.2 13.6 79 246-324 48-127 (248)
26 2b3t_A Protein methyltransfera 99.5 2.8E-13 9.5E-18 134.7 14.2 148 249-502 95-254 (276)
27 1o54_A SAM-dependent O-methylt 99.5 2.9E-13 9.9E-18 134.4 14.3 71 252-322 103-174 (277)
28 2frn_A Hypothetical protein PH 99.5 1.7E-13 5.9E-18 137.2 11.5 123 259-503 123-249 (278)
29 1yb2_A Hypothetical protein TA 99.5 1.6E-13 5.6E-18 136.4 10.9 83 240-322 89-172 (275)
30 1i9g_A Hypothetical protein RV 99.5 4.4E-13 1.5E-17 132.4 13.3 74 249-322 87-163 (280)
31 3mti_A RRNA methylase; SAM-dep 99.4 3.4E-13 1.2E-17 124.9 11.4 61 258-321 19-79 (185)
32 3e05_A Precorrin-6Y C5,15-meth 99.4 1.6E-12 5.6E-17 122.6 15.4 140 241-503 21-160 (204)
33 3njr_A Precorrin-6Y methylase; 99.4 1.6E-12 5.5E-17 124.1 15.3 70 251-323 45-115 (204)
34 3dou_A Ribosomal RNA large sub 99.4 3.3E-13 1.1E-17 128.1 9.3 133 259-501 23-155 (191)
35 3eey_A Putative rRNA methylase 99.4 1.1E-12 3.6E-17 122.8 12.4 67 257-323 18-85 (197)
36 4df3_A Fibrillarin-like rRNA/T 99.4 6.5E-13 2.2E-17 130.9 10.7 64 257-322 73-136 (233)
37 3p9n_A Possible methyltransfer 99.4 5.5E-12 1.9E-16 117.7 16.5 63 260-324 43-105 (189)
38 3k6r_A Putative transferase PH 99.4 8.3E-13 2.8E-17 133.3 11.3 63 259-323 123-186 (278)
39 3duw_A OMT, O-methyltransferas 99.4 1.6E-12 5.5E-17 124.1 12.1 78 247-324 44-122 (223)
40 3evz_A Methyltransferase; NYSG 99.4 9.4E-13 3.2E-17 126.2 10.2 149 258-507 52-201 (230)
41 3dr5_A Putative O-methyltransf 99.4 2.4E-12 8.1E-17 124.9 11.9 70 255-324 50-121 (221)
42 2qm3_A Predicted methyltransfe 99.4 4.1E-12 1.4E-16 132.4 14.2 81 241-323 151-232 (373)
43 2b25_A Hypothetical protein; s 99.3 4.5E-12 1.5E-16 129.6 13.1 73 250-322 94-177 (336)
44 3c3y_A Pfomt, O-methyltransfer 99.3 3.3E-12 1.1E-16 124.6 11.5 75 250-324 59-134 (237)
45 3hm2_A Precorrin-6Y C5,15-meth 99.3 4.6E-12 1.6E-16 115.8 11.3 69 252-322 16-85 (178)
46 2gpy_A O-methyltransferase; st 99.3 8.6E-13 2.9E-17 127.2 6.4 82 241-323 34-116 (233)
47 3a27_A TYW2, uncharacterized p 99.3 3.9E-12 1.3E-16 127.0 11.1 79 244-323 102-180 (272)
48 1dus_A MJ0882; hypothetical pr 99.3 1.4E-11 4.7E-16 113.3 13.1 71 249-322 40-112 (194)
49 2ozv_A Hypothetical protein AT 99.3 2.7E-12 9.1E-17 127.2 8.5 75 248-323 23-101 (260)
50 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.3E-11 4.4E-16 119.8 13.1 72 251-322 86-158 (258)
51 3r3h_A O-methyltransferase, SA 99.3 6.1E-13 2.1E-17 130.7 3.1 81 244-324 43-124 (242)
52 4dzr_A Protein-(glutamine-N5) 99.3 1.8E-12 6E-17 121.4 6.0 62 260-323 29-90 (215)
53 2ift_A Putative methylase HI07 99.3 7.5E-12 2.6E-16 118.9 10.3 61 261-323 53-115 (201)
54 1nt2_A Fibrillarin-like PRE-rR 99.3 1.3E-11 4.6E-16 118.6 11.8 62 257-321 53-114 (210)
55 3tr6_A O-methyltransferase; ce 99.3 7E-12 2.4E-16 119.7 9.6 78 247-324 50-128 (225)
56 3bt7_A TRNA (uracil-5-)-methyl 99.3 7.6E-12 2.6E-16 130.3 10.5 66 256-325 209-274 (369)
57 2fpo_A Methylase YHHF; structu 99.3 2.1E-11 7.1E-16 115.9 12.5 61 261-323 54-114 (202)
58 2plw_A Ribosomal RNA methyltra 99.3 2E-11 6.8E-16 114.3 12.1 146 259-500 20-169 (201)
59 2yvl_A TRMI protein, hypotheti 99.3 6.7E-11 2.3E-15 114.1 15.5 68 251-321 81-149 (248)
60 1inl_A Spermidine synthase; be 99.3 8.8E-12 3E-16 126.2 9.5 137 261-507 90-232 (296)
61 3c3p_A Methyltransferase; NP_9 99.3 4.9E-12 1.7E-16 120.0 7.2 74 250-323 45-119 (210)
62 3lbf_A Protein-L-isoaspartate 99.3 1.8E-11 6.2E-16 115.5 10.6 81 240-323 56-136 (210)
63 2yx1_A Hypothetical protein MJ 99.3 1.6E-11 5.5E-16 126.3 11.0 60 260-323 194-254 (336)
64 1sui_A Caffeoyl-COA O-methyltr 99.3 1.7E-11 5.7E-16 120.7 10.6 79 246-324 64-143 (247)
65 3kkz_A Uncharacterized protein 99.3 2.7E-11 9.3E-16 118.9 12.0 62 259-322 44-106 (267)
66 3dh0_A SAM dependent methyltra 99.2 3.7E-11 1.3E-15 113.7 12.3 71 252-322 28-98 (219)
67 2esr_A Methyltransferase; stru 99.2 4.2E-11 1.4E-15 110.0 12.0 63 259-323 29-92 (177)
68 1nv8_A HEMK protein; class I a 99.2 1.1E-11 3.7E-16 124.9 8.5 63 259-323 121-184 (284)
69 2fca_A TRNA (guanine-N(7)-)-me 99.2 4.1E-11 1.4E-15 114.9 12.0 63 260-323 37-99 (213)
70 3f4k_A Putative methyltransfer 99.2 7.2E-11 2.5E-15 114.5 13.9 62 258-321 43-105 (257)
71 1xdz_A Methyltransferase GIDB; 99.2 2.4E-11 8.1E-16 118.1 10.3 65 258-323 67-131 (240)
72 1dl5_A Protein-L-isoaspartate 99.2 4.7E-11 1.6E-15 121.4 12.1 73 251-323 65-137 (317)
73 1yzh_A TRNA (guanine-N(7)-)-me 99.2 4.4E-11 1.5E-15 113.9 10.9 62 260-322 40-101 (214)
74 3ntv_A MW1564 protein; rossman 99.2 1.8E-11 6.1E-16 118.7 8.0 78 245-323 55-133 (232)
75 3tm4_A TRNA (guanine N2-)-meth 99.2 7.9E-11 2.7E-15 122.8 13.4 64 259-323 215-279 (373)
76 2yxd_A Probable cobalt-precorr 99.2 3E-10 1E-14 103.5 15.3 69 252-323 26-94 (183)
77 3g89_A Ribosomal RNA small sub 99.2 4.8E-11 1.6E-15 117.8 10.6 64 259-323 78-141 (249)
78 3vc1_A Geranyl diphosphate 2-C 99.2 3.9E-11 1.3E-15 121.1 9.9 68 253-322 108-177 (312)
79 2ipx_A RRNA 2'-O-methyltransfe 99.2 5.2E-11 1.8E-15 114.9 10.4 64 257-322 73-136 (233)
80 3grz_A L11 mtase, ribosomal pr 99.2 5.8E-11 2E-15 111.8 10.4 62 259-322 58-119 (205)
81 3gdh_A Trimethylguanosine synt 99.2 7.7E-11 2.7E-15 113.7 11.1 72 249-323 66-138 (241)
82 2fhp_A Methylase, putative; al 99.2 1.1E-10 3.7E-15 107.5 11.5 64 259-324 42-106 (187)
83 3dxy_A TRNA (guanine-N(7)-)-me 99.2 8.5E-11 2.9E-15 113.7 11.3 64 260-324 33-96 (218)
84 1l3i_A Precorrin-6Y methyltran 99.2 8.2E-11 2.8E-15 107.9 10.6 70 251-323 23-93 (192)
85 3fpf_A Mtnas, putative unchara 99.2 1.6E-10 5.5E-15 117.7 13.7 67 256-323 117-183 (298)
86 1xxl_A YCGJ protein; structura 99.2 3.3E-11 1.1E-15 116.7 8.3 74 245-321 5-78 (239)
87 1vl5_A Unknown conserved prote 99.2 4.4E-11 1.5E-15 116.7 9.0 82 238-322 14-95 (260)
88 4dcm_A Ribosomal RNA large sub 99.2 1.4E-10 4.8E-15 121.4 13.4 74 248-322 209-285 (375)
89 1ej0_A FTSJ; methyltransferase 99.2 1.5E-10 5.2E-15 104.1 11.5 132 259-500 20-151 (180)
90 1g8a_A Fibrillarin-like PRE-rR 99.2 1.2E-10 4E-15 111.6 11.2 62 259-322 71-132 (227)
91 1nkv_A Hypothetical protein YJ 99.2 1.1E-10 3.6E-15 113.2 10.9 68 253-322 28-96 (256)
92 2yxe_A Protein-L-isoaspartate 99.2 2.7E-10 9.1E-15 107.9 13.3 71 252-322 68-138 (215)
93 1wy7_A Hypothetical protein PH 99.2 3.4E-10 1.2E-14 106.5 14.0 62 258-322 46-107 (207)
94 2pbf_A Protein-L-isoaspartate 99.2 7.2E-11 2.5E-15 112.9 9.4 66 258-323 77-151 (227)
95 3cbg_A O-methyltransferase; cy 99.2 1.1E-10 3.7E-15 113.3 10.7 73 252-324 63-136 (232)
96 2f8l_A Hypothetical protein LM 99.1 2.5E-11 8.6E-16 124.7 6.4 64 258-322 127-194 (344)
97 1o9g_A RRNA methyltransferase; 99.1 7.8E-11 2.7E-15 115.0 9.3 52 258-309 48-100 (250)
98 2vdv_E TRNA (guanine-N(7)-)-me 99.1 7.9E-11 2.7E-15 115.0 9.2 64 259-323 47-118 (246)
99 1r18_A Protein-L-isoaspartate( 99.1 1.2E-10 4.1E-15 111.9 10.3 72 251-322 72-155 (227)
100 2h1r_A Dimethyladenosine trans 99.1 4.3E-11 1.5E-15 121.4 7.4 74 246-322 27-100 (299)
101 4gek_A TRNA (CMO5U34)-methyltr 99.1 1.2E-10 4.1E-15 115.9 10.4 75 246-322 57-133 (261)
102 3hem_A Cyclopropane-fatty-acyl 99.1 4.4E-10 1.5E-14 112.5 14.3 68 253-322 64-132 (302)
103 1ws6_A Methyltransferase; stru 99.1 1.8E-10 6.1E-15 104.3 10.2 60 261-324 41-100 (171)
104 2nyu_A Putative ribosomal RNA 99.1 2E-10 6.8E-15 106.8 10.6 52 259-321 20-80 (196)
105 2p41_A Type II methyltransfera 99.1 3.9E-11 1.3E-15 122.3 5.6 32 259-294 80-111 (305)
106 2bm8_A Cephalosporin hydroxyla 99.1 5.3E-11 1.8E-15 116.4 6.2 137 254-509 74-216 (236)
107 3dlc_A Putative S-adenosyl-L-m 99.1 1.9E-10 6.4E-15 107.9 8.9 66 254-322 37-103 (219)
108 2avd_A Catechol-O-methyltransf 99.1 1.6E-10 5.5E-15 110.4 8.6 71 254-324 62-133 (229)
109 2hnk_A SAM-dependent O-methylt 99.1 4.7E-10 1.6E-14 108.7 11.8 74 251-324 50-124 (239)
110 2jjq_A Uncharacterized RNA met 99.1 8.8E-10 3E-14 117.3 14.9 65 255-323 284-348 (425)
111 3jwh_A HEN1; methyltransferase 99.1 3.2E-10 1.1E-14 107.6 10.2 68 253-321 21-93 (217)
112 3kr9_A SAM-dependent methyltra 99.1 2.2E-09 7.4E-14 105.2 16.0 64 259-323 13-77 (225)
113 2xvm_A Tellurite resistance pr 99.1 1.1E-09 3.9E-14 101.3 13.1 71 249-322 20-90 (199)
114 1jg1_A PIMT;, protein-L-isoasp 99.1 3.9E-10 1.3E-14 109.0 10.3 80 240-321 70-149 (235)
115 1uwv_A 23S rRNA (uracil-5-)-me 99.1 6.6E-10 2.2E-14 118.2 12.6 66 255-323 280-345 (433)
116 1fbn_A MJ fibrillarin homologu 99.1 3.7E-10 1.2E-14 109.0 9.6 63 257-322 70-132 (230)
117 3dmg_A Probable ribosomal RNA 99.1 6.7E-10 2.3E-14 116.6 12.1 60 259-322 231-290 (381)
118 3ckk_A TRNA (guanine-N(7)-)-me 99.0 4.9E-10 1.7E-14 109.6 9.7 64 259-323 44-113 (235)
119 2o57_A Putative sarcosine dime 99.0 3.4E-10 1.2E-14 112.6 8.7 63 258-322 79-142 (297)
120 1zx0_A Guanidinoacetate N-meth 99.0 5.3E-10 1.8E-14 108.0 9.6 62 259-323 58-119 (236)
121 3mgg_A Methyltransferase; NYSG 99.0 6.3E-10 2.1E-14 109.3 10.1 67 256-323 32-98 (276)
122 3ujc_A Phosphoethanolamine N-m 99.0 4.4E-10 1.5E-14 108.9 8.9 65 254-322 48-112 (266)
123 3bus_A REBM, methyltransferase 99.0 7E-10 2.4E-14 108.6 10.3 68 253-322 53-121 (273)
124 3orh_A Guanidinoacetate N-meth 99.0 4E-10 1.4E-14 109.8 8.0 62 259-323 58-119 (236)
125 2ih2_A Modification methylase 99.0 7.1E-10 2.4E-14 115.8 10.4 155 241-500 19-184 (421)
126 1vbf_A 231AA long hypothetical 99.0 1.2E-09 4E-14 104.6 11.1 77 241-322 50-126 (231)
127 2nxc_A L11 mtase, ribosomal pr 99.0 1.2E-09 4.3E-14 107.6 10.9 61 259-323 118-178 (254)
128 2pjd_A Ribosomal RNA small sub 99.0 1.2E-09 4.1E-14 112.3 11.2 71 249-321 184-254 (343)
129 2fk8_A Methoxy mycolic acid sy 99.0 2.5E-09 8.6E-14 107.6 13.2 67 253-321 82-149 (318)
130 2h00_A Methyltransferase 10 do 99.0 4.6E-09 1.6E-13 102.3 14.5 61 261-322 65-126 (254)
131 3jwg_A HEN1, methyltransferase 99.0 9.5E-10 3.3E-14 104.3 9.4 67 254-321 22-93 (219)
132 3lec_A NADB-rossmann superfami 99.0 8.4E-09 2.9E-13 101.4 15.8 75 248-323 8-83 (230)
133 3gu3_A Methyltransferase; alph 99.0 3.4E-10 1.2E-14 112.6 5.9 75 247-322 8-82 (284)
134 1ri5_A MRNA capping enzyme; me 99.0 1.1E-09 3.6E-14 108.2 9.4 62 259-322 62-124 (298)
135 1ve3_A Hypothetical protein PH 99.0 2.2E-09 7.5E-14 101.7 11.2 59 260-322 37-95 (227)
136 3ocj_A Putative exported prote 99.0 8.8E-10 3E-14 110.7 8.7 67 257-323 114-181 (305)
137 1kpg_A CFA synthase;, cyclopro 99.0 3.1E-09 1.1E-13 105.1 12.6 66 254-321 57-123 (287)
138 3ofk_A Nodulation protein S; N 99.0 1E-09 3.6E-14 103.7 8.7 68 250-322 40-107 (216)
139 1zq9_A Probable dimethyladenos 99.0 8.4E-10 2.9E-14 111.0 8.3 71 250-323 17-88 (285)
140 2kw5_A SLR1183 protein; struct 99.0 3.6E-09 1.2E-13 98.9 11.8 59 259-322 28-86 (202)
141 3gnl_A Uncharacterized protein 99.0 8.4E-09 2.9E-13 102.2 14.9 75 248-323 8-83 (244)
142 1jsx_A Glucose-inhibited divis 99.0 1.9E-09 6.7E-14 101.1 9.8 61 261-322 65-125 (207)
143 2pxx_A Uncharacterized protein 99.0 2.1E-09 7.2E-14 100.6 10.0 59 259-321 40-98 (215)
144 3dtn_A Putative methyltransfer 99.0 1.4E-09 4.7E-14 104.1 8.8 61 259-322 42-102 (234)
145 2wa2_A Non-structural protein 98.9 9.6E-10 3.3E-14 110.6 7.8 35 258-296 79-113 (276)
146 4fsd_A Arsenic methyltransfera 98.9 1.9E-09 6.4E-14 112.5 10.2 65 259-323 81-153 (383)
147 1mjf_A Spermidine synthase; sp 98.9 1.6E-09 5.6E-14 108.6 9.2 62 260-324 74-146 (281)
148 2okc_A Type I restriction enzy 98.9 6.5E-10 2.2E-14 118.5 6.6 162 241-501 151-329 (445)
149 3mq2_A 16S rRNA methyltransfer 98.9 1.5E-09 5.1E-14 103.1 8.4 68 254-322 20-91 (218)
150 3g5t_A Trans-aconitate 3-methy 98.9 1.6E-09 5.4E-14 108.3 9.0 65 259-323 34-100 (299)
151 3ou2_A SAM-dependent methyltra 98.9 3.2E-09 1.1E-13 99.8 9.8 64 252-322 37-100 (218)
152 2xyq_A Putative 2'-O-methyl tr 98.9 9.5E-10 3.2E-14 111.6 6.4 124 257-503 59-189 (290)
153 1pjz_A Thiopurine S-methyltran 98.9 7E-10 2.4E-14 105.4 5.0 48 257-307 18-65 (203)
154 3sm3_A SAM-dependent methyltra 98.9 1.7E-09 5.9E-14 102.6 7.3 59 260-321 29-92 (235)
155 3m70_A Tellurite resistance pr 98.9 6E-09 2E-13 103.1 11.4 65 255-323 114-178 (286)
156 1xtp_A LMAJ004091AAA; SGPP, st 98.9 2.7E-09 9.3E-14 103.0 8.7 64 255-322 87-150 (254)
157 3bkx_A SAM-dependent methyltra 98.9 3.7E-09 1.3E-13 103.5 9.4 69 252-320 34-109 (275)
158 2p35_A Trans-aconitate 2-methy 98.9 3.1E-09 1.1E-13 102.8 8.7 70 246-321 18-87 (259)
159 1m6y_A S-adenosyl-methyltransf 98.9 4.1E-09 1.4E-13 107.4 9.8 69 253-323 18-86 (301)
160 3g07_A 7SK snRNA methylphospha 98.9 4.7E-09 1.6E-13 105.2 9.9 50 261-311 46-95 (292)
161 3hnr_A Probable methyltransfer 98.9 3.2E-09 1.1E-13 100.4 8.0 59 256-321 40-98 (220)
162 4htf_A S-adenosylmethionine-de 98.9 2.7E-09 9.3E-14 105.6 7.8 60 261-323 68-128 (285)
163 2p8j_A S-adenosylmethionine-de 98.9 2.5E-09 8.4E-14 100.2 7.0 61 258-321 20-80 (209)
164 2oxt_A Nucleoside-2'-O-methylt 98.9 2.2E-09 7.4E-14 107.3 6.9 35 258-296 71-105 (265)
165 3cgg_A SAM-dependent methyltra 98.9 1.4E-08 4.9E-13 93.0 11.9 127 259-507 44-170 (195)
166 3g5l_A Putative S-adenosylmeth 98.9 3.5E-09 1.2E-13 102.7 8.1 64 254-322 37-100 (253)
167 3d2l_A SAM-dependent methyltra 98.9 8.9E-09 3E-13 98.5 10.7 58 260-322 32-89 (243)
168 1wzn_A SAM-dependent methyltra 98.9 1.8E-08 6.3E-13 97.3 12.9 62 257-322 37-98 (252)
169 2ex4_A Adrenal gland protein A 98.8 2.3E-09 7.9E-14 103.5 6.4 61 260-322 78-138 (241)
170 2vdw_A Vaccinia virus capping 98.8 6.4E-09 2.2E-13 105.5 10.0 51 260-312 47-97 (302)
171 3q87_B N6 adenine specific DNA 98.8 6.7E-09 2.3E-13 95.9 9.2 57 252-321 12-70 (170)
172 3q7e_A Protein arginine N-meth 98.8 4.4E-09 1.5E-13 108.6 8.9 61 259-322 64-125 (349)
173 2ar0_A M.ecoki, type I restric 98.8 2.9E-09 1E-13 116.5 7.5 82 241-322 149-252 (541)
174 3uwp_A Histone-lysine N-methyl 98.8 1E-08 3.6E-13 108.7 11.1 68 255-323 167-243 (438)
175 3g2m_A PCZA361.24; SAM-depende 98.8 4.3E-09 1.5E-13 105.1 7.7 63 256-322 78-143 (299)
176 2fyt_A Protein arginine N-meth 98.8 6.2E-09 2.1E-13 107.2 9.1 64 256-322 59-123 (340)
177 2yqz_A Hypothetical protein TT 98.8 3.6E-09 1.2E-13 102.5 6.7 60 258-321 36-95 (263)
178 3bkw_A MLL3908 protein, S-aden 98.8 4.7E-09 1.6E-13 100.4 7.4 66 252-322 34-99 (243)
179 3thr_A Glycine N-methyltransfe 98.8 2.3E-09 8E-14 106.1 5.0 67 253-322 49-119 (293)
180 3adn_A Spermidine synthase; am 98.8 6.9E-09 2.4E-13 105.2 8.3 61 261-322 83-148 (294)
181 3e23_A Uncharacterized protein 98.8 1.6E-08 5.5E-13 95.3 10.3 48 256-306 38-85 (211)
182 3i9f_A Putative type 11 methyl 98.8 5.3E-09 1.8E-13 95.1 6.5 57 256-320 12-68 (170)
183 3r0q_C Probable protein argini 98.8 1.1E-08 3.7E-13 106.8 9.5 64 257-323 59-123 (376)
184 1g6q_1 HnRNP arginine N-methyl 98.8 7.4E-09 2.5E-13 105.9 7.8 62 258-322 35-97 (328)
185 2i7c_A Spermidine synthase; tr 98.8 1.9E-08 6.4E-13 101.0 10.6 65 259-324 76-144 (283)
186 2o07_A Spermidine synthase; st 98.8 1.5E-08 5.1E-13 103.0 9.9 64 260-324 94-161 (304)
187 2pt6_A Spermidine synthase; tr 98.8 8.9E-09 3.1E-13 105.5 8.3 64 260-324 115-182 (321)
188 3ccf_A Cyclopropane-fatty-acyl 98.8 6.1E-09 2.1E-13 102.9 6.7 60 254-321 50-109 (279)
189 1iy9_A Spermidine synthase; ro 98.8 1.4E-08 4.9E-13 101.5 9.4 63 261-324 75-141 (275)
190 2y1w_A Histone-arginine methyl 98.8 1.3E-08 4.4E-13 104.9 9.1 65 255-322 44-109 (348)
191 3h2b_A SAM-dependent methyltra 98.8 4.6E-08 1.6E-12 91.4 11.9 53 262-322 42-94 (203)
192 1y8c_A S-adenosylmethionine-de 98.8 1.4E-08 4.9E-13 96.8 8.5 58 261-322 37-94 (246)
193 3dli_A Methyltransferase; PSI- 98.7 2E-08 7E-13 96.7 9.0 54 259-323 39-92 (240)
194 2gb4_A Thiopurine S-methyltran 98.7 8.6E-09 2.9E-13 101.9 6.5 47 257-306 64-110 (252)
195 1ne2_A Hypothetical protein TA 98.7 3.4E-08 1.2E-12 92.5 10.3 58 258-322 48-105 (200)
196 3lcc_A Putative methyl chlorid 98.7 4.5E-08 1.5E-12 93.9 11.3 58 262-322 67-125 (235)
197 3bgv_A MRNA CAP guanine-N7 met 98.7 2.8E-08 9.7E-13 99.9 9.9 61 260-322 33-100 (313)
198 3m33_A Uncharacterized protein 98.7 1.1E-08 3.7E-13 98.2 6.5 55 259-321 46-100 (226)
199 2r6z_A UPF0341 protein in RSP 98.7 3.2E-08 1.1E-12 98.4 10.0 70 252-324 74-151 (258)
200 3bwc_A Spermidine synthase; SA 98.7 7.1E-08 2.4E-12 97.8 12.7 65 259-324 93-161 (304)
201 3ldu_A Putative methylase; str 98.7 2.1E-07 7.3E-12 97.6 16.7 69 255-323 189-295 (385)
202 1u2z_A Histone-lysine N-methyl 98.7 4.7E-08 1.6E-12 104.3 11.7 66 255-321 236-310 (433)
203 1xj5_A Spermidine synthase 1; 98.7 5.3E-08 1.8E-12 100.4 11.8 65 259-324 118-186 (334)
204 3ege_A Putative methyltransfer 98.7 9E-09 3.1E-13 100.9 5.5 60 253-321 26-85 (261)
205 3p2e_A 16S rRNA methylase; met 98.7 2.5E-08 8.4E-13 96.8 8.5 79 241-322 6-88 (225)
206 3iv6_A Putative Zn-dependent a 98.7 5E-08 1.7E-12 97.5 10.9 54 252-308 36-89 (261)
207 3l8d_A Methyltransferase; stru 98.7 1.2E-08 4.2E-13 97.6 6.3 57 259-321 51-107 (242)
208 3k0b_A Predicted N6-adenine-sp 98.7 2.7E-07 9.1E-12 97.2 16.9 69 255-323 195-301 (393)
209 2p7i_A Hypothetical protein; p 98.7 1.1E-08 3.7E-13 97.6 5.5 57 259-322 40-96 (250)
210 1uir_A Polyamine aminopropyltr 98.7 4E-08 1.4E-12 100.1 10.0 64 260-324 76-144 (314)
211 2r3s_A Uncharacterized protein 98.7 2.5E-07 8.7E-12 93.3 15.7 65 256-322 158-225 (335)
212 2i62_A Nicotinamide N-methyltr 98.7 2E-08 6.7E-13 97.3 7.1 50 258-309 53-102 (265)
213 2aot_A HMT, histamine N-methyl 98.7 1.7E-08 5.8E-13 100.7 6.8 58 259-316 50-113 (292)
214 2a14_A Indolethylamine N-methy 98.7 1E-08 3.4E-13 101.1 5.0 50 258-309 52-101 (263)
215 1q7h_A Conserved hypothetical 98.7 9.6E-09 3.3E-13 94.6 4.3 73 122-226 69-141 (153)
216 3ldg_A Putative uncharacterize 98.7 2.6E-07 8.7E-12 97.1 15.3 69 255-323 188-294 (384)
217 2b2c_A Spermidine synthase; be 98.7 3.6E-08 1.2E-12 100.8 8.3 63 261-324 108-174 (314)
218 3lkd_A Type I restriction-modi 98.6 1.4E-07 4.7E-12 103.4 13.2 83 241-323 197-287 (542)
219 3b3j_A Histone-arginine methyl 98.6 3.3E-08 1.1E-12 106.7 8.1 64 256-322 153-217 (480)
220 3bzb_A Uncharacterized protein 98.6 1.3E-07 4.3E-12 94.5 11.6 60 259-320 77-147 (281)
221 3htx_A HEN1; HEN1, small RNA m 98.6 6.5E-08 2.2E-12 109.8 10.5 69 254-322 714-788 (950)
222 3e8s_A Putative SAM dependent 98.6 2.8E-07 9.7E-12 86.5 13.4 60 255-323 46-105 (227)
223 3gjy_A Spermidine synthase; AP 98.6 9E-08 3.1E-12 98.3 10.6 136 263-508 91-227 (317)
224 3d79_A PUA domain, putative un 98.6 2.8E-08 9.7E-13 94.0 6.3 73 124-227 95-167 (179)
225 3r90_A Malignant T cell-amplif 98.6 9.1E-09 3.1E-13 98.2 2.7 74 122-226 91-167 (188)
226 2gs9_A Hypothetical protein TT 98.6 2.2E-08 7.4E-13 94.2 5.3 51 261-321 36-86 (211)
227 3zv0_C H/ACA ribonucleoprotein 98.6 3.5E-08 1.2E-12 94.2 5.7 74 122-227 74-147 (195)
228 2qfm_A Spermine synthase; sper 98.6 9.6E-08 3.3E-12 99.6 9.6 142 261-506 188-339 (364)
229 3pfg_A N-methyltransferase; N, 98.6 4E-08 1.4E-12 95.8 6.2 55 260-322 49-103 (263)
230 3fzg_A 16S rRNA methylase; met 98.6 4.2E-08 1.4E-12 94.1 6.1 56 260-316 48-104 (200)
231 3bxo_A N,N-dimethyltransferase 98.6 1.5E-07 5.3E-12 89.6 10.1 54 260-321 39-92 (239)
232 4hg2_A Methyltransferase type 98.6 2.3E-08 8E-13 99.3 4.3 52 261-321 39-90 (257)
233 1p91_A Ribosomal RNA large sub 98.6 6.7E-08 2.3E-12 94.5 7.2 56 260-321 84-139 (269)
234 1qzz_A RDMB, aclacinomycin-10- 98.6 8.9E-07 3E-11 90.9 15.4 68 253-322 174-242 (374)
235 3ll7_A Putative methyltransfer 98.6 7.5E-08 2.6E-12 102.1 7.4 60 261-323 93-154 (410)
236 3khk_A Type I restriction-modi 98.5 7E-08 2.4E-12 105.8 6.7 72 240-312 224-309 (544)
237 3ggd_A SAM-dependent methyltra 98.5 3E-07 1E-11 88.5 10.4 60 258-323 53-112 (245)
238 1yub_A Ermam, rRNA methyltrans 98.5 7.4E-10 2.5E-14 108.4 -8.1 75 243-322 11-85 (245)
239 2avn_A Ubiquinone/menaquinone 98.5 1.7E-07 6E-12 91.5 8.6 43 261-306 54-96 (260)
240 2g72_A Phenylethanolamine N-me 98.5 7.1E-08 2.4E-12 95.8 5.5 47 260-308 70-116 (289)
241 3dp7_A SAM-dependent methyltra 98.5 2.2E-06 7.4E-11 88.5 16.9 61 260-322 178-239 (363)
242 2px2_A Genome polyprotein [con 98.5 1E-07 3.5E-12 94.8 6.1 36 259-294 71-109 (269)
243 3gwz_A MMCR; methyltransferase 98.5 4E-06 1.4E-10 86.7 18.4 67 254-322 195-262 (369)
244 3i53_A O-methyltransferase; CO 98.5 1.3E-06 4.4E-11 88.6 14.1 64 257-322 165-229 (332)
245 1x19_A CRTF-related protein; m 98.5 2.5E-06 8.5E-11 87.5 16.2 68 253-322 182-250 (359)
246 1tw3_A COMT, carminomycin 4-O- 98.5 1.2E-06 4.2E-11 89.5 13.4 67 254-322 176-243 (360)
247 2ip2_A Probable phenazine-spec 98.5 1.5E-06 5.2E-11 87.9 13.9 63 256-321 163-226 (334)
248 3mcz_A O-methyltransferase; ad 98.4 1.1E-06 3.8E-11 89.6 12.3 67 255-323 172-240 (352)
249 3v97_A Ribosomal RNA large sub 98.4 1.5E-06 5.2E-11 97.9 14.3 69 255-323 184-294 (703)
250 2oyr_A UPF0341 protein YHIQ; a 98.4 5.3E-07 1.8E-11 89.9 9.2 70 252-324 77-157 (258)
251 3cc8_A Putative methyltransfer 98.4 2E-07 7E-12 87.7 5.6 42 260-304 31-72 (230)
252 4hc4_A Protein arginine N-meth 98.4 5.9E-07 2E-11 94.2 9.1 60 260-322 82-142 (376)
253 3gru_A Dimethyladenosine trans 98.4 9.9E-07 3.4E-11 89.6 9.7 67 252-323 41-107 (295)
254 1qam_A ERMC' methyltransferase 98.4 1.1E-06 3.7E-11 86.2 9.7 67 252-323 21-87 (244)
255 2cx0_A Hypothetical protein AP 98.4 1.9E-07 6.6E-12 88.9 3.9 73 123-226 92-168 (187)
256 3sso_A Methyltransferase; macr 98.3 3.6E-07 1.2E-11 96.7 6.1 54 261-323 216-275 (419)
257 3hp7_A Hemolysin, putative; st 98.3 3.1E-07 1.1E-11 93.2 5.2 39 261-301 85-123 (291)
258 2qe6_A Uncharacterized protein 98.3 3.1E-06 1.1E-10 84.4 11.5 61 260-323 76-139 (274)
259 3ufb_A Type I restriction-modi 98.3 2.2E-06 7.6E-11 93.5 11.0 83 239-321 195-289 (530)
260 1iq8_A Archaeosine tRNA-guanin 98.3 6.1E-07 2.1E-11 99.0 6.3 74 122-227 506-579 (582)
261 2cmg_A Spermidine synthase; tr 98.3 1E-06 3.4E-11 87.8 7.1 43 261-306 72-114 (262)
262 2zfu_A Nucleomethylin, cerebra 98.3 5.6E-07 1.9E-11 84.8 4.8 44 462-507 131-174 (215)
263 3s1s_A Restriction endonucleas 98.2 2.3E-06 7.8E-11 97.1 10.0 43 260-302 320-364 (878)
264 1vlm_A SAM-dependent methyltra 98.2 5E-07 1.7E-11 85.8 4.0 46 262-321 48-93 (219)
265 3eld_A Methyltransferase; flav 98.2 7.4E-07 2.5E-11 90.3 4.3 36 260-296 80-115 (300)
266 3opn_A Putative hemolysin; str 98.2 1.1E-06 3.7E-11 85.9 5.3 43 260-304 36-78 (232)
267 3giw_A Protein of unknown func 98.2 5.3E-06 1.8E-10 83.6 10.1 62 262-323 79-142 (277)
268 3lst_A CALO1 methyltransferase 98.2 5.8E-06 2E-10 84.6 10.7 42 253-295 176-217 (348)
269 1af7_A Chemotaxis receptor met 98.2 1.5E-06 5.1E-11 87.3 6.0 45 261-305 105-156 (274)
270 3frh_A 16S rRNA methylase; met 98.2 1E-05 3.5E-10 80.1 11.8 57 260-321 104-160 (253)
271 4e2x_A TCAB9; kijanose, tetron 98.2 4.9E-07 1.7E-11 94.6 2.5 47 255-304 101-147 (416)
272 3evf_A RNA-directed RNA polyme 98.1 1E-05 3.5E-10 81.2 11.2 37 259-296 72-108 (277)
273 3cvo_A Methyltransferase-like 98.1 1.4E-05 4.9E-10 76.9 11.2 60 260-323 29-91 (202)
274 3gcz_A Polyprotein; flavivirus 98.1 7.8E-07 2.7E-11 89.5 2.1 38 259-297 88-125 (282)
275 3tqs_A Ribosomal RNA small sub 98.0 8E-06 2.7E-10 81.1 8.1 67 252-323 20-86 (255)
276 1wg8_A Predicted S-adenosylmet 98.0 8.6E-06 2.9E-10 82.2 8.1 65 253-324 14-78 (285)
277 3lcv_B Sisomicin-gentamicin re 98.0 1.1E-05 3.6E-10 80.9 8.5 58 262-321 133-190 (281)
278 3tka_A Ribosomal RNA small sub 97.9 1.6E-05 5.5E-10 82.0 8.6 67 253-323 49-115 (347)
279 4a6d_A Hydroxyindole O-methylt 97.9 7.1E-05 2.4E-09 77.1 13.4 66 255-322 173-238 (353)
280 2qy6_A UPF0209 protein YFCK; s 97.9 3.3E-05 1.1E-09 76.7 9.6 38 259-296 58-106 (257)
281 3reo_A (ISO)eugenol O-methyltr 97.9 6.6E-05 2.2E-09 77.7 12.1 55 259-321 201-255 (368)
282 3fut_A Dimethyladenosine trans 97.9 1.8E-05 6.1E-10 79.3 7.3 76 241-323 26-102 (271)
283 3p9c_A Caffeic acid O-methyltr 97.9 8.5E-05 2.9E-09 76.8 12.2 59 256-322 195-254 (364)
284 3uzu_A Ribosomal RNA small sub 97.8 3.1E-05 1.1E-09 77.8 8.5 68 253-324 34-102 (279)
285 3p8z_A Mtase, non-structural p 97.8 1.8E-05 6.2E-10 77.8 6.1 57 239-297 51-113 (267)
286 4auk_A Ribosomal RNA large sub 97.8 7.7E-05 2.6E-09 78.0 9.9 55 259-323 209-263 (375)
287 2ld4_A Anamorsin; methyltransf 97.8 2.8E-06 9.4E-11 77.8 -0.8 46 257-323 8-53 (176)
288 1fp1_D Isoliquiritigenin 2'-O- 97.7 6.7E-05 2.3E-09 77.4 8.9 55 259-321 207-261 (372)
289 4azs_A Methyltransferase WBDD; 97.7 8.9E-05 3.1E-09 81.3 10.3 61 261-324 66-126 (569)
290 2q07_A Uncharacterized protein 97.7 1.4E-05 4.9E-10 81.5 3.3 67 123-228 230-296 (306)
291 3r24_A NSP16, 2'-O-methyl tran 97.7 4.4E-05 1.5E-09 77.3 6.3 71 424-508 168-240 (344)
292 1fp2_A Isoflavone O-methyltran 97.7 0.00014 4.7E-09 74.3 9.9 55 259-321 186-240 (352)
293 2wk1_A NOVP; transferase, O-me 97.6 0.0002 6.7E-09 72.3 10.3 64 260-324 106-201 (282)
294 1qyr_A KSGA, high level kasuga 97.5 9.3E-05 3.2E-09 73.2 5.5 67 253-324 13-79 (252)
295 3ftd_A Dimethyladenosine trans 97.4 8.1E-05 2.8E-09 73.3 4.4 67 252-324 22-88 (249)
296 1zg3_A Isoflavanone 4'-O-methy 97.4 0.00058 2E-08 69.9 10.0 55 259-321 191-245 (358)
297 3lkz_A Non-structural protein 97.2 0.001 3.5E-08 67.4 9.3 39 258-297 91-129 (321)
298 2oo3_A Protein involved in cat 97.1 0.00019 6.6E-09 72.3 2.8 59 262-325 92-150 (283)
299 2p38_A Protein involved in rib 97.1 0.00071 2.4E-08 63.2 6.4 55 122-210 94-148 (166)
300 3c6k_A Spermine synthase; sper 97.1 0.0012 4E-08 69.2 8.7 63 261-325 205-275 (381)
301 3o4f_A Spermidine synthase; am 97.1 0.0036 1.2E-07 63.5 11.8 68 254-323 77-149 (294)
302 3u28_A H/ACA ribonucleoprotein 97.0 0.00067 2.3E-08 71.3 5.8 74 122-227 265-338 (400)
303 3ua3_A Protein arginine N-meth 96.9 0.00091 3.1E-08 75.0 6.9 62 262-324 410-484 (745)
304 4gqb_A Protein arginine N-meth 96.8 0.00074 2.5E-08 75.2 4.8 61 262-323 358-422 (637)
305 2j5v_A Glutamate 5-kinase; pro 96.3 0.0034 1.2E-07 65.4 5.6 63 122-216 274-337 (367)
306 1pl8_A Human sorbitol dehydrog 96.3 0.022 7.4E-07 58.1 11.5 54 255-313 165-219 (356)
307 1g55_A DNA cytosine methyltran 96.2 0.0079 2.7E-07 61.8 7.4 45 263-307 3-47 (343)
308 3g7u_A Cytosine-specific methy 96.1 0.015 5.1E-07 60.6 9.2 54 263-323 3-56 (376)
309 2zig_A TTHA0409, putative modi 95.8 0.021 7.1E-07 57.2 8.3 60 248-310 220-281 (297)
310 3s2e_A Zinc-containing alcohol 95.8 0.021 7.2E-07 57.7 8.3 53 255-313 160-213 (340)
311 1e3j_A NADP(H)-dependent ketos 95.7 0.037 1.3E-06 56.2 9.9 53 255-313 162-215 (352)
312 2py6_A Methyltransferase FKBM; 95.6 0.031 1.1E-06 58.7 8.9 64 257-320 222-290 (409)
313 4ej6_A Putative zinc-binding d 95.5 0.024 8.1E-07 58.4 7.8 54 255-313 176-230 (370)
314 2zig_A TTHA0409, putative modi 95.5 0.021 7.1E-07 57.1 7.1 62 422-483 37-98 (297)
315 3b5i_A S-adenosyl-L-methionine 95.5 0.15 5.1E-06 53.2 13.7 45 262-321 53-99 (374)
316 3jv7_A ADH-A; dehydrogenase, n 95.5 0.035 1.2E-06 56.1 8.6 52 258-314 168-220 (345)
317 2dph_A Formaldehyde dismutase; 95.4 0.019 6.4E-07 59.6 6.5 53 255-312 179-232 (398)
318 2c7p_A Modification methylase 95.4 0.031 1.1E-06 57.1 7.9 44 262-307 11-54 (327)
319 1p0f_A NADP-dependent alcohol 95.3 0.077 2.6E-06 54.3 10.6 53 256-313 186-239 (373)
320 3m6i_A L-arabinitol 4-dehydrog 95.3 0.11 3.8E-06 52.8 11.7 50 255-305 173-223 (363)
321 1f8f_A Benzyl alcohol dehydrog 95.2 0.037 1.3E-06 56.6 8.0 53 256-313 185-238 (371)
322 1e3i_A Alcohol dehydrogenase, 95.2 0.071 2.4E-06 54.6 9.9 53 256-313 190-243 (376)
323 3uko_A Alcohol dehydrogenase c 95.2 0.051 1.7E-06 55.8 8.8 54 255-313 187-241 (378)
324 2fzw_A Alcohol dehydrogenase c 95.1 0.086 3E-06 53.8 10.2 53 256-313 185-238 (373)
325 1cdo_A Alcohol dehydrogenase; 95.1 0.077 2.6E-06 54.3 9.8 53 256-313 187-240 (374)
326 2jhf_A Alcohol dehydrogenase E 95.0 0.1 3.4E-06 53.4 10.6 53 256-313 186-239 (374)
327 3fpc_A NADP-dependent alcohol 95.0 0.041 1.4E-06 55.8 7.4 54 255-313 160-214 (352)
328 1kol_A Formaldehyde dehydrogen 95.0 0.044 1.5E-06 56.6 7.7 52 256-312 180-232 (398)
329 4a2c_A Galactitol-1-phosphate 94.9 0.11 3.8E-06 52.2 10.2 55 254-313 153-208 (346)
330 4eez_A Alcohol dehydrogenase 1 94.8 0.099 3.4E-06 52.6 9.7 53 256-313 158-211 (348)
331 1sqw_A Saccharomyces cerevisia 94.8 0.034 1.2E-06 52.7 5.7 70 122-223 93-163 (188)
332 1vj0_A Alcohol dehydrogenase, 94.6 0.077 2.6E-06 54.6 8.4 52 256-313 189-243 (380)
333 2aus_C Pseudouridine synthase; 94.5 0.04 1.4E-06 56.7 6.0 72 122-225 249-320 (334)
334 1i4w_A Mitochondrial replicati 94.5 0.053 1.8E-06 56.2 6.9 60 261-324 58-117 (353)
335 1pqw_A Polyketide synthase; ro 94.5 0.061 2.1E-06 49.6 6.7 51 257-312 34-85 (198)
336 4dvj_A Putative zinc-dependent 94.4 0.081 2.8E-06 54.1 8.0 53 256-313 161-220 (363)
337 2qrv_A DNA (cytosine-5)-methyl 94.4 0.16 5.5E-06 51.2 10.0 58 260-323 14-72 (295)
338 1g60_A Adenine-specific methyl 94.2 0.057 2E-06 52.8 6.1 61 248-311 197-259 (260)
339 3two_A Mannitol dehydrogenase; 94.1 0.053 1.8E-06 55.0 5.9 53 256-314 171-224 (348)
340 3qv2_A 5-cytosine DNA methyltr 94.1 0.15 5.2E-06 52.1 9.2 44 262-306 10-55 (327)
341 3uog_A Alcohol dehydrogenase; 94.1 0.06 2.1E-06 55.0 6.2 52 256-313 184-236 (363)
342 2apo_A Probable tRNA pseudouri 94.0 0.059 2E-06 55.9 6.0 71 122-224 268-338 (357)
343 3fbg_A Putative arginate lyase 93.3 0.12 4E-06 52.4 6.7 46 261-313 150-198 (346)
344 4h0n_A DNMT2; SAH binding, tra 93.3 0.2 6.7E-06 51.3 8.3 43 263-306 4-47 (333)
345 1uuf_A YAHK, zinc-type alcohol 93.2 0.14 4.7E-06 52.6 7.1 51 257-313 190-241 (369)
346 4fs3_A Enoyl-[acyl-carrier-pro 92.8 0.78 2.7E-05 44.4 11.5 63 261-323 5-69 (256)
347 3ip1_A Alcohol dehydrogenase, 92.8 0.39 1.3E-05 49.7 9.9 51 258-313 210-261 (404)
348 1v3u_A Leukotriene B4 12- hydr 92.6 0.29 1E-05 48.9 8.4 51 257-312 141-192 (333)
349 2h6e_A ADH-4, D-arabinose 1-de 92.5 0.29 9.8E-06 49.4 8.2 51 258-313 168-219 (344)
350 3jyn_A Quinone oxidoreductase; 92.4 0.17 5.9E-06 50.6 6.4 49 257-312 136-187 (325)
351 2efj_A 3,7-dimethylxanthine me 92.3 0.32 1.1E-05 50.9 8.4 26 462-487 205-230 (384)
352 1g60_A Adenine-specific methyl 92.3 0.065 2.2E-06 52.4 3.0 57 423-485 21-77 (260)
353 3qwb_A Probable quinone oxidor 92.2 0.21 7E-06 50.2 6.7 51 257-312 144-195 (334)
354 3oig_A Enoyl-[acyl-carrier-pro 92.2 0.96 3.3E-05 43.4 11.2 62 261-322 6-69 (266)
355 1wma_A Carbonyl reductase [NAD 92.1 0.76 2.6E-05 43.6 10.3 61 261-323 3-65 (276)
356 2d8a_A PH0655, probable L-thre 91.8 0.2 7E-06 50.6 6.1 49 257-312 164-214 (348)
357 1boo_A Protein (N-4 cytosine-s 91.8 0.18 6E-06 51.2 5.6 57 422-484 30-86 (323)
358 3tos_A CALS11; methyltransfera 91.7 0.34 1.2E-05 47.9 7.5 65 424-511 181-248 (257)
359 3vyw_A MNMC2; tRNA wobble urid 91.6 1.1 3.9E-05 45.4 11.3 61 424-508 185-246 (308)
360 1qor_A Quinone oxidoreductase; 91.5 0.24 8E-06 49.5 6.2 52 256-312 135-187 (327)
361 4dup_A Quinone oxidoreductase; 91.5 0.21 7.2E-06 50.7 5.8 52 257-313 163-215 (353)
362 3gms_A Putative NADPH:quinone 91.2 0.3 1E-05 49.1 6.6 52 255-312 138-191 (340)
363 3grk_A Enoyl-(acyl-carrier-pro 91.1 2.7 9.4E-05 41.2 13.4 61 261-323 30-92 (293)
364 4eye_A Probable oxidoreductase 91.1 0.45 1.5E-05 48.0 7.8 52 256-313 154-207 (342)
365 2b5w_A Glucose dehydrogenase; 90.8 0.35 1.2E-05 49.1 6.7 50 257-312 162-224 (357)
366 2j3h_A NADP-dependent oxidored 90.8 0.5 1.7E-05 47.4 7.8 53 256-312 150-203 (345)
367 1m6e_X S-adenosyl-L-methionnin 90.8 0.3 1E-05 50.6 6.3 24 463-486 190-213 (359)
368 3gaz_A Alcohol dehydrogenase s 90.8 0.46 1.6E-05 47.9 7.6 50 256-312 145-196 (343)
369 2j8z_A Quinone oxidoreductase; 90.6 0.28 9.7E-06 49.8 5.8 51 257-312 158-209 (354)
370 4b7c_A Probable oxidoreductase 90.6 0.39 1.3E-05 48.1 6.8 53 256-312 144-197 (336)
371 1yb5_A Quinone oxidoreductase; 90.0 0.29 9.8E-06 49.8 5.3 52 256-312 165-217 (351)
372 1yb1_A 17-beta-hydroxysteroid 89.9 6.6 0.00023 37.7 14.8 61 261-323 30-91 (272)
373 2eih_A Alcohol dehydrogenase; 89.8 0.48 1.7E-05 47.7 6.7 50 257-312 162-213 (343)
374 1eg2_A Modification methylase 89.7 0.2 7E-06 50.8 3.8 51 423-482 56-106 (319)
375 2k4m_A TR8_protein, UPF0146 pr 89.6 0.18 6E-06 46.3 2.9 39 260-300 34-73 (153)
376 4a0s_A Octenoyl-COA reductase/ 89.1 1.2 4E-05 46.6 9.3 52 257-313 216-268 (447)
377 1ja9_A 4HNR, 1,3,6,8-tetrahydr 89.1 1.8 6E-05 41.3 9.8 61 261-323 20-82 (274)
378 3o38_A Short chain dehydrogena 88.9 2.7 9.1E-05 40.2 11.0 62 261-323 21-84 (266)
379 3krt_A Crotonyl COA reductase; 88.8 0.74 2.5E-05 48.5 7.4 51 257-313 224-276 (456)
380 2c0c_A Zinc binding alcohol de 88.6 1.4 4.8E-05 44.8 9.1 52 256-313 158-211 (362)
381 3pxx_A Carveol dehydrogenase; 88.4 5.7 0.0002 38.1 13.1 61 261-323 9-82 (287)
382 3rkr_A Short chain oxidoreduct 88.4 5.8 0.0002 37.9 13.0 61 261-323 28-89 (262)
383 1wly_A CAAR, 2-haloacrylate re 88.4 0.52 1.8E-05 47.2 5.7 52 256-312 140-192 (333)
384 1gu7_A Enoyl-[acyl-carrier-pro 88.1 1.4 4.7E-05 44.5 8.7 55 257-313 162-219 (364)
385 3i1j_A Oxidoreductase, short c 88.1 4.1 0.00014 38.2 11.6 60 261-321 13-73 (247)
386 3k31_A Enoyl-(acyl-carrier-pro 88.0 3.5 0.00012 40.5 11.4 61 261-323 29-91 (296)
387 3tjr_A Short chain dehydrogena 88.0 2.8 9.6E-05 41.3 10.7 61 261-323 30-91 (301)
388 3tqh_A Quinone oxidoreductase; 87.8 1.3 4.5E-05 44.0 8.3 52 255-313 146-199 (321)
389 3ubt_Y Modification methylase 87.7 1.3 4.5E-05 44.1 8.1 41 263-305 1-41 (331)
390 3ek2_A Enoyl-(acyl-carrier-pro 86.7 2.6 9E-05 40.1 9.4 62 260-323 12-75 (271)
391 1w6u_A 2,4-dienoyl-COA reducta 85.9 7.1 0.00024 37.7 12.2 61 261-323 25-87 (302)
392 3is3_A 17BETA-hydroxysteroid d 85.9 11 0.00038 36.1 13.5 61 261-323 17-79 (270)
393 3pvc_A TRNA 5-methylaminomethy 85.9 1.6 5.5E-05 48.4 8.3 56 424-503 170-225 (689)
394 3ioy_A Short-chain dehydrogena 85.8 5.3 0.00018 39.7 11.5 62 261-323 7-70 (319)
395 1iz0_A Quinone oxidoreductase; 85.7 0.65 2.2E-05 45.8 4.6 48 259-312 123-172 (302)
396 4eso_A Putative oxidoreductase 85.4 3 0.0001 40.0 9.1 58 261-323 7-65 (255)
397 3lyl_A 3-oxoacyl-(acyl-carrier 85.4 11 0.00038 35.2 13.0 60 262-323 5-65 (247)
398 3lf2_A Short chain oxidoreduct 85.1 8.4 0.00029 36.9 12.1 61 262-323 8-70 (265)
399 3rih_A Short chain dehydrogena 84.8 2.8 9.5E-05 41.4 8.7 62 261-323 40-102 (293)
400 3pi7_A NADH oxidoreductase; gr 84.5 0.75 2.6E-05 46.4 4.5 50 260-313 162-212 (349)
401 3ijr_A Oxidoreductase, short c 84.5 11 0.00038 36.7 12.9 61 261-323 46-108 (291)
402 3r3s_A Oxidoreductase; structu 84.3 8 0.00027 37.8 11.8 60 261-322 48-110 (294)
403 1zsy_A Mitochondrial 2-enoyl t 84.1 3.3 0.00011 41.8 9.1 54 257-313 163-219 (357)
404 1fmc_A 7 alpha-hydroxysteroid 84.0 7.3 0.00025 36.4 11.0 60 261-322 10-70 (255)
405 3pgx_A Carveol dehydrogenase; 83.9 6 0.0002 38.2 10.6 61 261-323 14-88 (280)
406 2jah_A Clavulanic acid dehydro 83.9 8.5 0.00029 36.4 11.5 60 262-323 7-67 (247)
407 3h7a_A Short chain dehydrogena 83.9 6.7 0.00023 37.4 10.8 60 262-323 7-67 (252)
408 1gee_A Glucose 1-dehydrogenase 83.7 7.4 0.00025 36.7 11.0 60 262-323 7-68 (261)
409 3svt_A Short-chain type dehydr 83.6 6.6 0.00023 37.9 10.7 62 261-323 10-74 (281)
410 3tfo_A Putative 3-oxoacyl-(acy 83.4 8 0.00027 37.4 11.2 60 262-323 4-64 (264)
411 3r1i_A Short-chain type dehydr 83.3 5 0.00017 39.0 9.7 61 261-323 31-92 (276)
412 4a27_A Synaptic vesicle membra 83.2 2.1 7.3E-05 43.0 7.2 51 256-313 137-189 (349)
413 3ksu_A 3-oxoacyl-acyl carrier 83.2 8.1 0.00028 37.0 11.1 62 261-323 10-74 (262)
414 3me5_A Cytosine-specific methy 83.1 2.8 9.4E-05 45.1 8.4 60 261-324 87-146 (482)
415 1geg_A Acetoin reductase; SDR 83.0 5.9 0.0002 37.6 10.0 59 263-323 3-62 (256)
416 3v2g_A 3-oxoacyl-[acyl-carrier 82.9 15 0.00051 35.4 13.0 61 261-323 30-92 (271)
417 3pk0_A Short-chain dehydrogena 82.9 9.4 0.00032 36.5 11.4 62 261-323 9-71 (262)
418 2p91_A Enoyl-[acyl-carrier-pro 82.5 12 0.0004 36.2 12.0 60 261-322 20-81 (285)
419 3awd_A GOX2181, putative polyo 82.1 9.4 0.00032 35.8 11.0 60 262-323 13-73 (260)
420 1xa0_A Putative NADPH dependen 82.1 1.7 5.9E-05 43.2 5.9 51 257-313 144-197 (328)
421 3t4x_A Oxidoreductase, short c 82.1 21 0.00071 34.1 13.6 61 261-322 9-71 (267)
422 2pd4_A Enoyl-[acyl-carrier-pro 81.9 6.3 0.00022 37.9 9.8 61 261-323 5-67 (275)
423 4dry_A 3-oxoacyl-[acyl-carrier 81.7 6.6 0.00022 38.2 9.9 62 261-323 32-94 (281)
424 3nyw_A Putative oxidoreductase 81.7 7.6 0.00026 37.0 10.2 61 262-323 7-70 (250)
425 3f1l_A Uncharacterized oxidore 81.6 13 0.00046 35.1 11.9 60 261-321 11-71 (252)
426 1edo_A Beta-keto acyl carrier 81.5 14 0.00046 34.3 11.8 59 263-323 2-62 (244)
427 3trk_A Nonstructural polyprote 81.5 0.82 2.8E-05 45.6 3.2 80 420-508 204-285 (324)
428 1vl8_A Gluconate 5-dehydrogena 81.3 16 0.00055 35.0 12.5 61 261-323 20-82 (267)
429 3nx4_A Putative oxidoreductase 81.3 1.5 5E-05 43.5 5.1 51 257-313 141-194 (324)
430 3f9i_A 3-oxoacyl-[acyl-carrier 81.2 15 0.00052 34.3 12.1 58 260-322 12-70 (249)
431 4fc7_A Peroxisomal 2,4-dienoyl 81.2 12 0.0004 36.1 11.5 61 261-323 26-88 (277)
432 2a4k_A 3-oxoacyl-[acyl carrier 81.1 8.1 0.00028 37.1 10.2 57 262-323 6-63 (263)
433 3s55_A Putative short-chain de 81.0 13 0.00045 35.7 11.7 61 261-323 9-82 (281)
434 2rhc_B Actinorhodin polyketide 80.9 13 0.00045 35.8 11.8 61 261-323 21-82 (277)
435 2c07_A 3-oxoacyl-(acyl-carrier 80.7 20 0.00068 34.5 13.0 60 262-323 44-104 (285)
436 3ucx_A Short chain dehydrogena 80.4 12 0.00039 35.8 11.0 61 261-323 10-71 (264)
437 1yxm_A Pecra, peroxisomal tran 80.3 15 0.00051 35.5 12.0 62 261-323 17-83 (303)
438 2vn8_A Reticulon-4-interacting 80.0 4.4 0.00015 41.1 8.3 47 259-313 181-230 (375)
439 3guy_A Short-chain dehydrogena 79.8 13 0.00043 34.6 10.9 50 269-322 7-57 (230)
440 3cxt_A Dehydrogenase with diff 79.6 16 0.00054 35.7 11.9 61 261-323 33-94 (291)
441 2pnf_A 3-oxoacyl-[acyl-carrier 79.6 14 0.00046 34.4 11.0 59 262-322 7-67 (248)
442 3oid_A Enoyl-[acyl-carrier-pro 79.5 12 0.00042 35.6 10.9 60 262-323 4-65 (258)
443 3ai3_A NADPH-sorbose reductase 79.5 16 0.00056 34.6 11.7 60 262-323 7-68 (263)
444 3e9n_A Putative short-chain de 79.4 21 0.00073 33.3 12.4 56 262-324 5-60 (245)
445 3imf_A Short chain dehydrogena 79.4 13 0.00045 35.3 11.0 60 262-323 6-66 (257)
446 1xhl_A Short-chain dehydrogena 79.2 16 0.00056 35.6 11.9 62 261-323 25-89 (297)
447 3ftp_A 3-oxoacyl-[acyl-carrier 79.1 12 0.00042 36.0 10.8 61 261-323 27-88 (270)
448 3rku_A Oxidoreductase YMR226C; 79.0 26 0.00089 34.1 13.3 61 262-323 33-98 (287)
449 3gqv_A Enoyl reductase; medium 78.9 5.2 0.00018 40.6 8.4 47 260-313 163-211 (371)
450 4a7p_A UDP-glucose dehydrogena 78.7 10 0.00035 40.1 10.8 36 269-304 13-49 (446)
451 3gaf_A 7-alpha-hydroxysteroid 78.4 10 0.00035 36.1 9.9 61 261-323 11-72 (256)
452 1eg2_A Modification methylase 78.4 2.5 8.6E-05 42.7 5.7 60 248-310 227-291 (319)
453 2uvd_A 3-oxoacyl-(acyl-carrier 78.3 16 0.00055 34.3 11.2 60 262-323 4-65 (246)
454 4egf_A L-xylulose reductase; s 78.1 9.6 0.00033 36.5 9.7 60 262-323 20-81 (266)
455 2ae2_A Protein (tropinone redu 78.1 23 0.00079 33.5 12.4 61 261-323 8-69 (260)
456 3l6e_A Oxidoreductase, short-c 78.0 11 0.00037 35.5 9.8 57 262-323 3-60 (235)
457 2bd0_A Sepiapterin reductase; 78.0 13 0.00043 34.6 10.3 59 263-323 3-69 (244)
458 4e6p_A Probable sorbitol dehyd 77.9 15 0.0005 34.9 10.9 58 261-323 7-65 (259)
459 2pd6_A Estradiol 17-beta-dehyd 77.9 4.3 0.00015 38.3 7.0 60 262-322 7-73 (264)
460 1spx_A Short-chain reductase f 77.6 17 0.00057 34.7 11.2 61 262-323 6-69 (278)
461 3sju_A Keto reductase; short-c 77.6 8.1 0.00028 37.4 9.0 60 262-323 24-84 (279)
462 2wyu_A Enoyl-[acyl carrier pro 77.5 6.4 0.00022 37.6 8.1 61 261-323 7-69 (261)
463 1qsg_A Enoyl-[acyl-carrier-pro 77.4 11 0.00036 36.0 9.7 60 261-322 8-69 (265)
464 3l77_A Short-chain alcohol deh 77.4 14 0.00047 34.3 10.3 60 262-323 2-63 (235)
465 1tt7_A YHFP; alcohol dehydroge 77.0 2.7 9.2E-05 41.8 5.5 51 257-313 145-198 (330)
466 3op4_A 3-oxoacyl-[acyl-carrier 76.6 15 0.00052 34.7 10.5 58 261-323 8-66 (248)
467 1xg5_A ARPG836; short chain de 76.5 19 0.00065 34.4 11.3 61 262-323 32-94 (279)
468 1xq1_A Putative tropinone redu 76.3 21 0.00072 33.6 11.4 59 262-322 14-73 (266)
469 3sc4_A Short chain dehydrogena 76.3 25 0.00086 33.9 12.2 60 262-323 9-76 (285)
470 1xkq_A Short-chain reductase f 76.2 16 0.00054 35.1 10.7 61 262-323 6-69 (280)
471 2x9g_A PTR1, pteridine reducta 76.1 20 0.00069 34.5 11.5 59 262-322 23-84 (288)
472 1zem_A Xylitol dehydrogenase; 76.1 13 0.00043 35.4 9.9 61 261-323 6-67 (262)
473 3osu_A 3-oxoacyl-[acyl-carrier 76.0 15 0.00052 34.5 10.3 60 262-323 4-65 (246)
474 1g0o_A Trihydroxynaphthalene r 75.8 29 0.00098 33.3 12.4 60 261-322 28-89 (283)
475 1boo_A Protein (N-4 cytosine-s 75.8 2.2 7.4E-05 43.0 4.4 50 259-311 250-299 (323)
476 3n74_A 3-ketoacyl-(acyl-carrie 75.2 22 0.00077 33.4 11.3 57 262-323 9-66 (261)
477 2ph3_A 3-oxoacyl-[acyl carrier 74.9 19 0.00067 33.2 10.6 58 264-322 3-62 (245)
478 3afn_B Carbonyl reductase; alp 74.8 11 0.00037 35.2 8.9 61 261-323 6-68 (258)
479 3v2h_A D-beta-hydroxybutyrate 74.8 9.2 0.00031 37.1 8.6 61 262-323 25-87 (281)
480 1cyd_A Carbonyl reductase; sho 74.8 37 0.0013 31.3 12.6 56 261-322 6-62 (244)
481 4imr_A 3-oxoacyl-(acyl-carrier 74.7 14 0.00047 35.8 9.8 60 261-322 32-92 (275)
482 3ps9_A TRNA 5-methylaminomethy 74.4 14 0.00049 40.5 10.9 56 424-503 178-233 (676)
483 3v8b_A Putative dehydrogenase, 74.3 14 0.00049 35.8 9.9 61 261-323 27-88 (283)
484 3sx2_A Putative 3-ketoacyl-(ac 74.3 24 0.00084 33.6 11.4 61 261-323 12-85 (278)
485 2z1n_A Dehydrogenase; reductas 74.0 42 0.0014 31.6 12.9 61 262-323 7-69 (260)
486 2ehd_A Oxidoreductase, oxidore 73.7 20 0.00069 33.0 10.4 56 262-323 5-61 (234)
487 2wsb_A Galactitol dehydrogenas 73.5 17 0.0006 33.8 10.0 58 261-322 10-68 (254)
488 4ibo_A Gluconate dehydrogenase 73.1 18 0.00063 34.7 10.2 61 261-323 25-86 (271)
489 2h7i_A Enoyl-[acyl-carrier-pro 73.1 8.3 0.00028 36.9 7.7 59 261-322 6-66 (269)
490 1uls_A Putative 3-oxoacyl-acyl 73.0 21 0.00072 33.6 10.4 54 262-322 5-59 (245)
491 1y1p_A ARII, aldehyde reductas 72.9 41 0.0014 32.4 12.8 61 261-322 10-72 (342)
492 1rjw_A ADH-HT, alcohol dehydro 72.7 4 0.00014 40.8 5.5 50 257-312 160-210 (339)
493 3dii_A Short-chain dehydrogena 72.6 11 0.00036 35.7 8.2 56 262-323 2-58 (247)
494 2b4q_A Rhamnolipids biosynthes 72.6 11 0.00038 36.4 8.6 59 261-322 28-87 (276)
495 4gua_A Non-structural polyprot 72.5 4.8 0.00016 44.0 6.2 77 424-509 220-296 (670)
496 3asu_A Short-chain dehydrogena 72.5 35 0.0012 32.2 11.9 51 269-323 6-57 (248)
497 2hwk_A Helicase NSP2; rossman 72.3 2.7 9.1E-05 42.4 3.9 71 424-508 205-280 (320)
498 1iy8_A Levodione reductase; ox 72.3 35 0.0012 32.3 12.0 60 262-323 13-75 (267)
499 3t7c_A Carveol dehydrogenase; 72.1 31 0.0011 33.5 11.8 61 261-323 27-100 (299)
500 1piw_A Hypothetical zinc-type 72.0 3.5 0.00012 41.6 4.9 52 257-314 175-227 (360)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=3.8e-46 Score=389.45 Aligned_cols=180 Identities=27% Similarity=0.391 Sum_probs=152.7
Q ss_pred cCCCccc--cccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH
Q 009628 231 QLPSFYD--VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE 308 (530)
Q Consensus 231 ~lP~~~~--~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~ 308 (530)
.+|+|.. +.-+.+++||.+||+++++|+|+||++||||||||||||+|||++|. .|.|+|+|++.+|+..+++++++
T Consensus 116 ~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r 194 (359)
T 4fzv_A 116 RFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHS 194 (359)
T ss_dssp CCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHH
T ss_pred cCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHH
Confidence 4444432 23467999999999999999999999999999999999999999774 58999999999999999999999
Q ss_pred hCCC------ceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccc
Q 009628 309 MGLK------CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEK 382 (530)
Q Consensus 309 ~gl~------~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (530)
+|.. ++.+...|+.+.-
T Consensus 195 ~~~~~~~~~~~v~v~~~D~~~~~--------------------------------------------------------- 217 (359)
T 4fzv_A 195 YVPEEIRDGNQVRVTSWDGRKWG--------------------------------------------------------- 217 (359)
T ss_dssp HSCTTTTTSSSEEEECCCGGGHH---------------------------------------------------------
T ss_pred hhhhhhccCCceEEEeCchhhcc---------------------------------------------------------
Confidence 9864 4666666654420
Q ss_pred cccccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCC--CCc---ccchhhhhhHHHHHHH
Q 009628 383 GVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSAL--GLR---PRLFAAEETIQSLRNH 457 (530)
Q Consensus 383 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSgl--G~r---p~l~~~~~t~~~l~~~ 457 (530)
.+.++.||+||+||||||+ |++ |.+++ .++.+++..+
T Consensus 218 -------------------------------------~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~-~~~~~~~~~l 259 (359)
T 4fzv_A 218 -------------------------------------ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFK-RSRKKERQIL 259 (359)
T ss_dssp -------------------------------------HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTS-GGGHHHHHTH
T ss_pred -------------------------------------hhccccCCEEEECCccCCCCCcccccChhhhh-hCCHHHHHHH
Confidence 1234689999999999997 442 55566 7889999999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHHHhCCCcee
Q 009628 458 GKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALDRYKFLSL 506 (530)
Q Consensus 458 ~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L~~~~~~~l 506 (530)
+.+|++||.+|+++|||||+|||||||++++|||+||.+||++++++..
T Consensus 260 ~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~ 308 (359)
T 4fzv_A 260 PVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYS 308 (359)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCcc
Confidence 9999999999999999999999999999999999999999998876433
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=2e-42 Score=371.66 Aligned_cols=177 Identities=27% Similarity=0.480 Sum_probs=161.6
Q ss_pred ccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEE
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (530)
.+|.+++||.+|++++.+|++++|++|||||||||+||++||++|++.|+|+|+|+|+.++..++++++++|+++|.++.
T Consensus 83 ~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~ 162 (456)
T 3m4x_A 83 QAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN 162 (456)
T ss_dssp HTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC
T ss_pred hCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe
Confidence 58999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred cchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 009628 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (530)
Q Consensus 319 ~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 398 (530)
.|+.+...
T Consensus 163 ~Da~~l~~------------------------------------------------------------------------ 170 (456)
T 3m4x_A 163 HAPAELVP------------------------------------------------------------------------ 170 (456)
T ss_dssp CCHHHHHH------------------------------------------------------------------------
T ss_pred CCHHHhhh------------------------------------------------------------------------
Confidence 99865310
Q ss_pred hhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCc---ccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 009628 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (530)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpG 475 (530)
+.+++||+||+||||||+|+. |...+ .++.+++..++.+|+++|++|.++||||
T Consensus 171 ----------------------~~~~~FD~Il~DaPCSg~G~~rr~p~~~~-~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 227 (456)
T 3m4x_A 171 ----------------------HFSGFFDRIVVDAPCSGEGMFRKDPNAIK-EWTEESPLYCQKRQQEILSSAIKMLKNK 227 (456)
T ss_dssp ----------------------HHTTCEEEEEEECCCCCGGGTTTCHHHHH-HCCTTHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred ----------------------hccccCCEEEECCCCCCccccccCHHHhh-hcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 113579999999999999984 44444 5788899999999999999999999999
Q ss_pred CEEEEEecCCCCCCCHHHHHHHHHhCCCceeecCCC
Q 009628 476 GIIVYSTCTINPGENEALVRYALDRYKFLSLAPQHP 511 (530)
Q Consensus 476 G~LVYSTCSi~~~ENE~vV~~~L~~~~~~~l~~~~p 511 (530)
|+|||||||++++|||++|.++|++++ +++++..+
T Consensus 228 G~LvYsTCs~~~eEne~vv~~~l~~~~-~~l~~~~~ 262 (456)
T 3m4x_A 228 GQLIYSTCTFAPEENEEIISWLVENYP-VTIEEIPL 262 (456)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHSS-EEEECCCC
T ss_pred cEEEEEEeecccccCHHHHHHHHHhCC-CEEEeccc
Confidence 999999999999999999999999999 99998754
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=3.1e-42 Score=370.75 Aligned_cols=177 Identities=31% Similarity=0.460 Sum_probs=162.6
Q ss_pred ccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEE
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (530)
.+|.+++||.+|++++.+|++++|++|||||||||+||++||++|++.|.|+|+|+|+.++..++++++++|++ |.++.
T Consensus 79 ~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~ 157 (464)
T 3m6w_A 79 YAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQ 157 (464)
T ss_dssp HTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEEC
T ss_pred hCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEE
Confidence 58999999999999999999999999999999999999999999998899999999999999999999999999 99999
Q ss_pred cchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 009628 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (530)
Q Consensus 319 ~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 398 (530)
.|+.....
T Consensus 158 ~Da~~l~~------------------------------------------------------------------------ 165 (464)
T 3m6w_A 158 APPRALAE------------------------------------------------------------------------ 165 (464)
T ss_dssp SCHHHHHH------------------------------------------------------------------------
T ss_pred CCHHHhhh------------------------------------------------------------------------
Confidence 99866310
Q ss_pred hhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCc---ccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 009628 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (530)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpG 475 (530)
+.+++||+||+||||||+|+. |...+ .++.+++..++..|+++|++|.++||||
T Consensus 166 ----------------------~~~~~FD~Il~D~PcSg~G~~rr~pd~~~-~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 222 (464)
T 3m6w_A 166 ----------------------AFGTYFHRVLLDAPCSGEGMFRKDREAAR-HWGPSAPKRMAEVQKALLAQASRLLGPG 222 (464)
T ss_dssp ----------------------HHCSCEEEEEEECCCCCGGGTTTCTTSGG-GCCTTHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred ----------------------hccccCCEEEECCCcCCccccccChHHhh-hcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 113579999999999999974 55555 6788999999999999999999999999
Q ss_pred CEEEEEecCCCCCCCHHHHHHHHHhCCCceeecCCC
Q 009628 476 GIIVYSTCTINPGENEALVRYALDRYKFLSLAPQHP 511 (530)
Q Consensus 476 G~LVYSTCSi~~~ENE~vV~~~L~~~~~~~l~~~~p 511 (530)
|+|||||||++++|||++|.++|++||++++++...
T Consensus 223 G~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~~~ 258 (464)
T 3m6w_A 223 GVLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDARL 258 (464)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHCTTEEEECCCC
T ss_pred cEEEEEeccCchhcCHHHHHHHHHHCCCcEEEeccc
Confidence 999999999999999999999999999999998754
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=5.9e-42 Score=370.31 Aligned_cols=177 Identities=32% Similarity=0.523 Sum_probs=159.3
Q ss_pred ccceEEEeccchHHHHHhcCCC--CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEE
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQ--KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~Ldpq--pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~ 316 (530)
.+|.+++||.+|++++++|+++ +|++|||||||||+||++||++|+++|.|+|+|+|+.++..++++++++|+++|.+
T Consensus 93 ~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~ 172 (479)
T 2frx_A 93 LSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVAL 172 (479)
T ss_dssp HTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred hCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEE
Confidence 5899999999999999999999 99999999999999999999999888999999999999999999999999999999
Q ss_pred EEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhh
Q 009628 317 YKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRK 396 (530)
Q Consensus 317 ~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 396 (530)
+..|+....
T Consensus 173 ~~~D~~~~~----------------------------------------------------------------------- 181 (479)
T 2frx_A 173 THFDGRVFG----------------------------------------------------------------------- 181 (479)
T ss_dssp ECCCSTTHH-----------------------------------------------------------------------
T ss_pred EeCCHHHhh-----------------------------------------------------------------------
Confidence 988875421
Q ss_pred hhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCc---ccchhhhhhHHHHHHHHHHHHHHHHHHHhcCC
Q 009628 397 NMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVR 473 (530)
Q Consensus 397 ~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLk 473 (530)
.+.+++||+||+||||||+|+. |...+ .|+.+++..++.+|+++|++|.++||
T Consensus 182 -----------------------~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~-~~~~~~~~~l~~~q~~iL~~a~~~Lk 237 (479)
T 2frx_A 182 -----------------------AAVPEMFDAILLDAPCSGEGVVRKDPDALK-NWSPESNQEIAATQRELIDSAFHALR 237 (479)
T ss_dssp -----------------------HHSTTCEEEEEEECCCCCGGGGGTCTTSSS-SCCHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred -----------------------hhccccCCEEEECCCcCCcccccCCHHHHh-hcCHhHHHHHHHHHHHHHHHHHHhcC
Confidence 0023579999999999999974 45555 67889999999999999999999999
Q ss_pred CCCEEEEEecCCCCCCCHHHHHHHHHhCCCc-eeecCC
Q 009628 474 PGGIIVYSTCTINPGENEALVRYALDRYKFL-SLAPQH 510 (530)
Q Consensus 474 pGG~LVYSTCSi~~~ENE~vV~~~L~~~~~~-~l~~~~ 510 (530)
|||+|||||||++++|||++|.++|++++++ ++++..
T Consensus 238 pGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~ 275 (479)
T 2frx_A 238 PGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLG 275 (479)
T ss_dssp EEEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCT
T ss_pred CCCEEEEecccCCcccCHHHHHHHHHHCCCceeccccc
Confidence 9999999999999999999999999999985 666554
No 5
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=1.6e-41 Score=348.03 Aligned_cols=183 Identities=31% Similarity=0.491 Sum_probs=152.4
Q ss_pred cccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEE
Q 009628 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317 (530)
Q Consensus 238 ~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~ 317 (530)
+++|.+++||.+|++++++|++++|++|||||||||+||++||++|+++|+|+|+|+++.++..++++++++|+++|+++
T Consensus 79 ~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~ 158 (309)
T 2b9e_A 79 YRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELA 158 (309)
T ss_dssp HHTTSEEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHCCeEEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 35899999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred EcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhh
Q 009628 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKN 397 (530)
Q Consensus 318 ~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 397 (530)
..|+.+...
T Consensus 159 ~~D~~~~~~----------------------------------------------------------------------- 167 (309)
T 2b9e_A 159 EEDFLAVSP----------------------------------------------------------------------- 167 (309)
T ss_dssp ECCGGGSCT-----------------------------------------------------------------------
T ss_pred eCChHhcCc-----------------------------------------------------------------------
Confidence 999764200
Q ss_pred hhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCc---ccchhh-hhhHHHHHHHHHHHHHHHHHHHhcCC
Q 009628 398 MRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAA-EETIQSLRNHGKYQRRMFDQAVQLVR 473 (530)
Q Consensus 398 ~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~-~~t~~~l~~~~~~Qr~ll~~A~~lLk 473 (530)
....+ .+||+||+||||||+|+. |+..+. .++.+++..++.+|++||++|+++|+
T Consensus 168 -------------------~~~~~--~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~ 226 (309)
T 2b9e_A 168 -------------------SDPRY--HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS 226 (309)
T ss_dssp -------------------TCGGG--TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT
T ss_pred -------------------ccccc--CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 00001 469999999999999984 343331 23567889999999999999999997
Q ss_pred CCCEEEEEecCCCCCCCHHHHHHHHHhCCC-ceeecCCCCC
Q 009628 474 PGGIIVYSTCTINPGENEALVRYALDRYKF-LSLAPQHPRI 513 (530)
Q Consensus 474 pGG~LVYSTCSi~~~ENE~vV~~~L~~~~~-~~l~~~~p~~ 513 (530)
||+|||||||++++|||++|.++|+++|+ +++++..+.+
T Consensus 227 -gG~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~ 266 (309)
T 2b9e_A 227 -LQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPAW 266 (309)
T ss_dssp -CCEEEEEESCCCGGGTHHHHHHHHTTSTTTEEECCCCTTC
T ss_pred -CCEEEEECCCCChHHhHHHHHHHHHhCCCcEEEecccccc
Confidence 99999999999999999999999999998 9998765543
No 6
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=9e-41 Score=342.17 Aligned_cols=175 Identities=34% Similarity=0.646 Sum_probs=154.9
Q ss_pred ccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEE
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (530)
.+|.+++||.+|++++.+|++++|++|||+|||||+||+++|++++++++|+|+|+|+.++..++++++++|+++++++.
T Consensus 96 ~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~ 175 (315)
T 1ixk_A 96 LTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFH 175 (315)
T ss_dssp HTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEES
T ss_pred hcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 57999999999999999999999999999999999999999999988899999999999999999999999998899998
Q ss_pred cchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 009628 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (530)
Q Consensus 319 ~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 398 (530)
.|+....
T Consensus 176 ~D~~~~~------------------------------------------------------------------------- 182 (315)
T 1ixk_A 176 SSSLHIG------------------------------------------------------------------------- 182 (315)
T ss_dssp SCGGGGG-------------------------------------------------------------------------
T ss_pred CChhhcc-------------------------------------------------------------------------
Confidence 8875420
Q ss_pred hhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCc---ccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 009628 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (530)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpG 475 (530)
..+++||+|++|||||++|+. |...+ .++.+++..+...|+++|+++.++||||
T Consensus 183 ----------------------~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~-~~~~~~~~~~~~~q~~~L~~~~~~LkpG 239 (315)
T 1ixk_A 183 ----------------------ELNVEFDKILLDAPCTGSGTIHKNPERKW-NRTMDDIKFCQGLQMRLLEKGLEVLKPG 239 (315)
T ss_dssp ----------------------GGCCCEEEEEEECCTTSTTTCC---------CCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred ----------------------cccccCCEEEEeCCCCCcccccCChhHhh-cCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 013579999999999999974 44555 5788999999999999999999999999
Q ss_pred CEEEEEecCCCCCCCHHHHHHHHHhCCCceeecCC
Q 009628 476 GIIVYSTCTINPGENEALVRYALDRYKFLSLAPQH 510 (530)
Q Consensus 476 G~LVYSTCSi~~~ENE~vV~~~L~~~~~~~l~~~~ 510 (530)
|+|||||||++++|||++|.++|++++ +++++..
T Consensus 240 G~lv~stcs~~~~Ene~~v~~~l~~~~-~~~~~~~ 273 (315)
T 1ixk_A 240 GILVYSTCSLEPEENEFVIQWALDNFD-VELLPLK 273 (315)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHSS-EEEECCC
T ss_pred CEEEEEeCCCChHHhHHHHHHHHhcCC-CEEecCC
Confidence 999999999999999999999999975 7877654
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1e-39 Score=349.64 Aligned_cols=179 Identities=35% Similarity=0.593 Sum_probs=161.5
Q ss_pred ccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEE
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (530)
.+|.+++||.+|++++.++++++|++|||+|||||+||+++|.+|+++|.|+|+|+|+.++..++++++++|+++++++.
T Consensus 237 ~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~ 316 (450)
T 2yxl_A 237 NEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLV 316 (450)
T ss_dssp HTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred hCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 47999999999999999999999999999999999999999999987799999999999999999999999999898888
Q ss_pred cchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 009628 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (530)
Q Consensus 319 ~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 398 (530)
.|+.+.
T Consensus 317 ~D~~~~-------------------------------------------------------------------------- 322 (450)
T 2yxl_A 317 KDARKA-------------------------------------------------------------------------- 322 (450)
T ss_dssp SCTTCC--------------------------------------------------------------------------
T ss_pred cChhhc--------------------------------------------------------------------------
Confidence 886431
Q ss_pred hhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCC---cccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 009628 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (530)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~---rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpG 475 (530)
...|..++||+||+|||||++|+ .|...| .++++++..++.+|+++|.++.++||||
T Consensus 323 -------------------~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~-~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 323 -------------------PEIIGEEVADKVLLDAPCTSSGTIGKNPELRW-RLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp -------------------SSSSCSSCEEEEEEECCCCCGGGTTTSTTHHH-HCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred -------------------chhhccCCCCEEEEcCCCCCCeeeccChhhhh-hCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 00133467999999999999997 355555 5678889999999999999999999999
Q ss_pred CEEEEEecCCCCCCCHHHHHHHHHhCCCceeecCCC
Q 009628 476 GIIVYSTCTINPGENEALVRYALDRYKFLSLAPQHP 511 (530)
Q Consensus 476 G~LVYSTCSi~~~ENE~vV~~~L~~~~~~~l~~~~p 511 (530)
|+|||||||++++|||++|.++|+++|++++++..+
T Consensus 383 G~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~~ 418 (450)
T 2yxl_A 383 GRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKS 418 (450)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCCS
T ss_pred cEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeeccc
Confidence 999999999999999999999999999999988764
No 8
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=2.3e-39 Score=344.70 Aligned_cols=188 Identities=32% Similarity=0.505 Sum_probs=162.4
Q ss_pred ccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEE
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (530)
..|.+++|+..|++++.+|++++|++|||+|||||+||+++|+++.+ |.|+|+|+++.++..++++++++|+. ++++.
T Consensus 224 ~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~ 301 (429)
T 1sqg_A 224 EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQ 301 (429)
T ss_dssp GGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC-CEEEE
T ss_pred hCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC-eEEEe
Confidence 48999999999999999999999999999999999999999999865 99999999999999999999999985 67788
Q ss_pred cchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 009628 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (530)
Q Consensus 319 ~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 398 (530)
.|+.+..
T Consensus 302 ~D~~~~~------------------------------------------------------------------------- 308 (429)
T 1sqg_A 302 GDGRYPS------------------------------------------------------------------------- 308 (429)
T ss_dssp CCTTCTH-------------------------------------------------------------------------
T ss_pred Cchhhch-------------------------------------------------------------------------
Confidence 7764310
Q ss_pred hhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCc---ccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 009628 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (530)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpG 475 (530)
..|..++||+||+|||||++|+. |...| .++.+++..++.+|+++|+++.++||||
T Consensus 309 --------------------~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~-~~~~~~~~~l~~~q~~~L~~a~~~LkpG 367 (429)
T 1sqg_A 309 --------------------QWCGEQQFDRILLDAPCSATGVIRRHPDIKW-LRRDRDIPELAQLQSEILDAIWPHLKTG 367 (429)
T ss_dssp --------------------HHHTTCCEEEEEEECCCCCGGGTTTCTTHHH-HCCTTHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred --------------------hhcccCCCCEEEEeCCCCcccccCCCcchhh-cCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 01234679999999999999973 55555 5678899999999999999999999999
Q ss_pred CEEEEEecCCCCCCCHHHHHHHHHhCCCceeecCCCCCCCCCccceEEcCC
Q 009628 476 GIIVYSTCTINPGENEALVRYALDRYKFLSLAPQHPRIGGPGLVGRYEFPD 526 (530)
Q Consensus 476 G~LVYSTCSi~~~ENE~vV~~~L~~~~~~~l~~~~p~~g~pg~~g~~~~~~ 526 (530)
|+|||||||++++|||++|.++|++++++++++. |.+.-.|...+|.
T Consensus 368 G~lvystcs~~~~ene~~v~~~l~~~~~~~~~~~----~~~~~~~~~~~P~ 414 (429)
T 1sqg_A 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPG 414 (429)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHCTTCEECSS----BCSSSBSEEECCC
T ss_pred CEEEEEECCCChhhHHHHHHHHHHhCCCCEEeCC----CCCCCCeEEECCC
Confidence 9999999999999999999999999999999882 2233334566775
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=1.8e-37 Score=310.97 Aligned_cols=179 Identities=30% Similarity=0.497 Sum_probs=152.4
Q ss_pred ccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEE
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (530)
.+|.+++|+..|++++.+|++++|++|||+|||||+||+++|+++.+.++|+|+|+|+.++..++++++++|+++++++.
T Consensus 61 ~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~ 140 (274)
T 3ajd_A 61 LFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN 140 (274)
T ss_dssp HTTSEEECCSGGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hCCeEEEeCHHHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 58999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred cchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 009628 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (530)
Q Consensus 319 ~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 398 (530)
.|+.+.... ..
T Consensus 141 ~D~~~~~~~------------------------------------------------------------------~~--- 151 (274)
T 3ajd_A 141 ADMRKYKDY------------------------------------------------------------------LL--- 151 (274)
T ss_dssp SCHHHHHHH------------------------------------------------------------------HH---
T ss_pred CChHhcchh------------------------------------------------------------------hh---
Confidence 998763110 00
Q ss_pred hhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEE
Q 009628 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGII 478 (530)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~L 478 (530)
...++||+|++|||||++|+..+.. .++.+++..+...|+++|++|.++|||||+|
T Consensus 152 ----------------------~~~~~fD~Vl~d~Pcs~~g~~~~~p--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 207 (274)
T 3ajd_A 152 ----------------------KNEIFFDKILLDAPCSGNIIKDKNR--NVSEEDIKYCSLRQKELIDIGIDLLKKDGEL 207 (274)
T ss_dssp ----------------------HTTCCEEEEEEEECCC--------------HHHHTGGGTCHHHHHHHHHHHEEEEEEE
T ss_pred ----------------------hccccCCEEEEcCCCCCCcccccCC--CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 0135799999999999999855443 4778889999999999999999999999999
Q ss_pred EEEecCCCCCCCHHHHHHHHHhCCCceeecCC
Q 009628 479 VYSTCTINPGENEALVRYALDRYKFLSLAPQH 510 (530)
Q Consensus 479 VYSTCSi~~~ENE~vV~~~L~~~~~~~l~~~~ 510 (530)
||||||++++|||++|+++|++++++++++..
T Consensus 208 v~stcs~~~~ene~~v~~~l~~~~~~~~~~~~ 239 (274)
T 3ajd_A 208 VYSTCSMEVEENEEVIKYILQKRNDVELIIIK 239 (274)
T ss_dssp EEEESCCCTTSSHHHHHHHHHHCSSEEEECCC
T ss_pred EEEECCCChHHhHHHHHHHHHhCCCcEEecCc
Confidence 99999999999999999999999999998765
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.75 E-value=5.8e-18 Score=166.85 Aligned_cols=133 Identities=17% Similarity=0.132 Sum_probs=103.1
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCCc
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~ 337 (530)
.++||++|||+|||||++|.++|.+++++|.|+|+|.|+.++..+.+.+++. ++|.++..|+.....
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~----------- 139 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQS----------- 139 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGG-----------
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchh-----------
Confidence 4899999999999999999999999998999999999999998887777764 679999888753100
Q ss_pred cCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCcccC
Q 009628 338 CNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAEN 417 (530)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~ 417 (530)
T Consensus 140 -------------------------------------------------------------------------------- 139 (232)
T 3id6_C 140 -------------------------------------------------------------------------------- 139 (232)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHH-HHhcCCCCCEEEEE---ec---CCCCCCC
Q 009628 418 SKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQ-AVQLVRPGGIIVYS---TC---TINPGEN 490 (530)
Q Consensus 418 ~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~-A~~lLkpGG~LVYS---TC---Si~~~EN 490 (530)
. ....++||+|++|.+- . .|.++|.. +.++|||||+||+| +| |++++||
T Consensus 140 ~-~~~~~~~D~I~~d~a~---------~--------------~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~ 195 (232)
T 3id6_C 140 Y-KSVVENVDVLYVDIAQ---------P--------------DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEI 195 (232)
T ss_dssp T-TTTCCCEEEEEECCCC---------T--------------THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSS
T ss_pred h-hccccceEEEEecCCC---------h--------------hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHH
Confidence 0 0123589999999762 1 14455544 44499999999977 89 9999999
Q ss_pred HHHHHHHHHhCCCceeec
Q 009628 491 EALVRYALDRYKFLSLAP 508 (530)
Q Consensus 491 E~vV~~~L~~~~~~~l~~ 508 (530)
.+.+.++|++++ ++++.
T Consensus 196 ~~~~~~~L~~~g-f~~~~ 212 (232)
T 3id6_C 196 YKTEVEKLENSN-FETIQ 212 (232)
T ss_dssp TTHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHCC-CEEEE
Confidence 999999999875 55543
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.74 E-value=1.1e-17 Score=176.71 Aligned_cols=176 Identities=22% Similarity=0.297 Sum_probs=135.0
Q ss_pred eeeecCCccccCCCccccccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHH
Q 009628 221 IAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300 (530)
Q Consensus 221 laV~~~~~v~~lP~~~~~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~ 300 (530)
+.+++....|.+....++++|.|+.|.....++...+ ++|++|||+|||+|++|.++|.. + ..|+|+|.|+.+++
T Consensus 176 ~~v~E~g~~f~vd~~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~ 250 (393)
T 4dmg_A 176 LEVEEDGLRFPIPLALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALG 250 (393)
T ss_dssp EEEEETTEEEEEETTTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHH
T ss_pred EEEEECCEEEEEechhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHH
Confidence 3444455556565556678999999999988877665 47999999999999999999984 2 34999999999999
Q ss_pred HHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccc
Q 009628 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSN 380 (530)
Q Consensus 301 ~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (530)
.++++++.+|+.. .+...|+.+.+.
T Consensus 251 ~a~~n~~~ng~~~-~~~~~D~~~~l~------------------------------------------------------ 275 (393)
T 4dmg_A 251 VLDQAALRLGLRV-DIRHGEALPTLR------------------------------------------------------ 275 (393)
T ss_dssp HHHHHHHHHTCCC-EEEESCHHHHHH------------------------------------------------------
T ss_pred HHHHHHHHhCCCC-cEEEccHHHHHH------------------------------------------------------
Confidence 9999999999874 455888776421
Q ss_pred cccccccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHH
Q 009628 381 EKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKY 460 (530)
Q Consensus 381 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~ 460 (530)
.+ .+.||+|++||||-+.+ ...+....+.
T Consensus 276 ---------------------------------------~~-~~~fD~Ii~dpP~f~~~-----------~~~~~~~~~~ 304 (393)
T 4dmg_A 276 ---------------------------------------GL-EGPFHHVLLDPPTLVKR-----------PEELPAMKRH 304 (393)
T ss_dssp ---------------------------------------TC-CCCEEEEEECCCCCCSS-----------GGGHHHHHHH
T ss_pred ---------------------------------------Hh-cCCCCEEEECCCcCCCC-----------HHHHHHHHHH
Confidence 11 23499999999994322 1234455567
Q ss_pred HHHHHHHHHhcCCCCCEEEEEecCCCCCCCH--HHHHHHHHhCC-Cceee
Q 009628 461 QRRMFDQAVQLVRPGGIIVYSTCTINPGENE--ALVRYALDRYK-FLSLA 507 (530)
Q Consensus 461 Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE--~vV~~~L~~~~-~~~l~ 507 (530)
+.+++..|.++|||||+|+|+||+.+..+++ ++|..++.+.. .++++
T Consensus 305 ~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 305 LVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 7899999999999999999999999999887 67777765433 34444
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.68 E-value=8.9e-17 Score=168.19 Aligned_cols=175 Identities=24% Similarity=0.283 Sum_probs=132.0
Q ss_pred cCCccccCCCccccccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHH
Q 009628 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (530)
Q Consensus 225 ~~~~v~~lP~~~~~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~ 304 (530)
+....|.+.....+.+|.++.|.....+.+.+ +|++|||+|||+|+.+.++|.. ..+|+++|.|+..+..+++
T Consensus 177 e~g~~f~i~~~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~ 249 (382)
T 1wxx_A 177 EGRVRYLVDLRAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEE 249 (382)
T ss_dssp ETTEEEEEECSTTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHH
T ss_pred ECCEEEEEEchhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHH
Confidence 33334455555556788888887665554433 7899999999999999999986 4789999999999999999
Q ss_pred HHHHhCCCceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccc
Q 009628 305 LAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGV 384 (530)
Q Consensus 305 ~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (530)
+++.+|+++++++..|+.+.+..
T Consensus 250 n~~~n~~~~~~~~~~d~~~~~~~--------------------------------------------------------- 272 (382)
T 1wxx_A 250 NARLNGLGNVRVLEANAFDLLRR--------------------------------------------------------- 272 (382)
T ss_dssp HHHHTTCTTEEEEESCHHHHHHH---------------------------------------------------------
T ss_pred HHHHcCCCCceEEECCHHHHHHH---------------------------------------------------------
Confidence 99999998899999998764310
Q ss_pred cccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHH
Q 009628 385 ERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRM 464 (530)
Q Consensus 385 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~l 464 (530)
.. -...+||.|++|||+.+..- ..+......+.++
T Consensus 273 ---------~~-------------------------~~~~~fD~Ii~dpP~~~~~~-----------~~~~~~~~~~~~~ 307 (382)
T 1wxx_A 273 ---------LE-------------------------KEGERFDLVVLDPPAFAKGK-----------KDVERAYRAYKEV 307 (382)
T ss_dssp ---------HH-------------------------HTTCCEEEEEECCCCSCCST-----------TSHHHHHHHHHHH
T ss_pred ---------HH-------------------------hcCCCeeEEEECCCCCCCCh-----------hHHHHHHHHHHHH
Confidence 00 01357999999999965431 1233445567799
Q ss_pred HHHHHhcCCCCCEEEEEecCCCCCCC--HHHHHHHHHhC-CCceeec
Q 009628 465 FDQAVQLVRPGGIIVYSTCTINPGEN--EALVRYALDRY-KFLSLAP 508 (530)
Q Consensus 465 l~~A~~lLkpGG~LVYSTCSi~~~EN--E~vV~~~L~~~-~~~~l~~ 508 (530)
+..+.++|+|||+|+++||+.+..++ ++.+..++.+. ..++++.
T Consensus 308 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 308 NLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp HHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 99999999999999999999988875 56776555444 3466553
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.65 E-value=5e-16 Score=162.97 Aligned_cols=177 Identities=20% Similarity=0.243 Sum_probs=130.9
Q ss_pred cCCccccCCCccccccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHH
Q 009628 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (530)
Q Consensus 225 ~~~~v~~lP~~~~~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~ 304 (530)
+....|.++. .++.+|.++.|.....++..++ ++|++|||+|||+|+.+.++|.. +.++|+|+|.|+..+..+++
T Consensus 184 e~g~~~~~~~-~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~ 258 (396)
T 2as0_A 184 EGRAKFIVDM-RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKE 258 (396)
T ss_dssp ETTEEEEEES-SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHH
T ss_pred eCCEEEEEec-cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHH
Confidence 3333455554 5567788877766666655553 58999999999999999999974 35699999999999999999
Q ss_pred HHHHhCCC-ceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccccccccccc
Q 009628 305 LAAEMGLK-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKG 383 (530)
Q Consensus 305 ~a~~~gl~-~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (530)
+++.+|++ +++++..|+.+....
T Consensus 259 n~~~n~~~~~v~~~~~d~~~~~~~-------------------------------------------------------- 282 (396)
T 2as0_A 259 NAKLNGVEDRMKFIVGSAFEEMEK-------------------------------------------------------- 282 (396)
T ss_dssp HHHHTTCGGGEEEEESCHHHHHHH--------------------------------------------------------
T ss_pred HHHHcCCCccceEEECCHHHHHHH--------------------------------------------------------
Confidence 99999998 799999998764210
Q ss_pred ccccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHH
Q 009628 384 VERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRR 463 (530)
Q Consensus 384 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ 463 (530)
.. ....+||.|++|||+.+.. ...+......+.+
T Consensus 283 ----------~~-------------------------~~~~~fD~Vi~dpP~~~~~-----------~~~~~~~~~~~~~ 316 (396)
T 2as0_A 283 ----------LQ-------------------------KKGEKFDIVVLDPPAFVQH-----------EKDLKAGLRAYFN 316 (396)
T ss_dssp ----------HH-------------------------HTTCCEEEEEECCCCSCSS-----------GGGHHHHHHHHHH
T ss_pred ----------HH-------------------------hhCCCCCEEEECCCCCCCC-----------HHHHHHHHHHHHH
Confidence 00 0135799999999985532 1123344456679
Q ss_pred HHHHHHhcCCCCCEEEEEecCCCCCCC--HHHHHHHHHhCC-Cceeec
Q 009628 464 MFDQAVQLVRPGGIIVYSTCTINPGEN--EALVRYALDRYK-FLSLAP 508 (530)
Q Consensus 464 ll~~A~~lLkpGG~LVYSTCSi~~~EN--E~vV~~~L~~~~-~~~l~~ 508 (530)
++..+.++|||||+|+|+||+.+..++ ++++..+..+.. .++++.
T Consensus 317 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 317 VNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp HHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred HHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999999877654 566766655443 355554
No 14
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.64 E-value=3.9e-16 Score=163.98 Aligned_cols=180 Identities=17% Similarity=0.155 Sum_probs=134.8
Q ss_pred eeeecCCccccCCCccccccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHH
Q 009628 221 IAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300 (530)
Q Consensus 221 laV~~~~~v~~lP~~~~~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~ 300 (530)
+.+++....|.++....+.+|.+..|.....++..+ .+|++|||+|||+|+.+.++|.. +.++|+|+|.|+..++
T Consensus 183 ~~~~~~g~~f~v~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~ 257 (396)
T 3c0k_A 183 LPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALD 257 (396)
T ss_dssp EEEEETTEEEEECTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHH
T ss_pred EEEEECCEEEEEeccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHH
Confidence 344444545666666667789888888777776665 57899999999999999999983 3569999999999999
Q ss_pred HHHHHHHHhCC-C-ceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccc
Q 009628 301 DIQKLAAEMGL-K-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKV 378 (530)
Q Consensus 301 ~i~~~a~~~gl-~-~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (530)
.++++++.+|+ + +++++..|+.+.+..
T Consensus 258 ~a~~n~~~ngl~~~~v~~~~~D~~~~~~~--------------------------------------------------- 286 (396)
T 3c0k_A 258 IARQNVELNKLDLSKAEFVRDDVFKLLRT--------------------------------------------------- 286 (396)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHcCCCccceEEEECCHHHHHHH---------------------------------------------------
Confidence 99999999999 7 799999998774310
Q ss_pred cccccccccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHH
Q 009628 379 SNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHG 458 (530)
Q Consensus 379 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~ 458 (530)
..+ ...+||.|++|||+.+..-. . +....
T Consensus 287 ---------------~~~-------------------------~~~~fD~Ii~dpP~~~~~~~-~----------~~~~~ 315 (396)
T 3c0k_A 287 ---------------YRD-------------------------RGEKFDVIVMDPPKFVENKS-Q----------LMGAC 315 (396)
T ss_dssp ---------------HHH-------------------------TTCCEEEEEECCSSTTTCSS-S----------SSCCC
T ss_pred ---------------HHh-------------------------cCCCCCEEEECCCCCCCChh-H----------HHHHH
Confidence 000 12479999999998654321 0 11112
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEecCCCCC--CCHHHHHHHHHhC-CCceee
Q 009628 459 KYQRRMFDQAVQLVRPGGIIVYSTCTINPG--ENEALVRYALDRY-KFLSLA 507 (530)
Q Consensus 459 ~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~--ENE~vV~~~L~~~-~~~~l~ 507 (530)
..+.+++..+.++|+|||+|++|+|+.+.. +++++++.++.+. ..++++
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 335689999999999999999999998877 6678888665543 345554
No 15
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.63 E-value=7.2e-16 Score=173.65 Aligned_cols=167 Identities=16% Similarity=0.167 Sum_probs=128.1
Q ss_pred eeeecCCccccCCCccccccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHH
Q 009628 221 IAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300 (530)
Q Consensus 221 laV~~~~~v~~lP~~~~~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~ 300 (530)
+.+.+....|.+.....+.+|.++.|.....++.... +|.+|||+|||+|+.+.++|. .+..+|+++|.|+..+.
T Consensus 502 ~~v~E~g~~~~v~~~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~s~~al~ 576 (703)
T 3v97_A 502 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGL--GGARSTTTVDMSRTYLE 576 (703)
T ss_dssp EEEEETTEEEEECSSSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHH--TTCSEEEEEESCHHHHH
T ss_pred EEEEECCEEEEEeccccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHH--CCCCEEEEEeCCHHHHH
Confidence 3444455556665555668999999998887777654 689999999999999998887 44568999999999999
Q ss_pred HHHHHHHHhCCC--ceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccc
Q 009628 301 DIQKLAAEMGLK--CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKV 378 (530)
Q Consensus 301 ~i~~~a~~~gl~--~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (530)
.+++|++.+|++ +++++..|+++.+..
T Consensus 577 ~a~~N~~~ngl~~~~v~~i~~D~~~~l~~--------------------------------------------------- 605 (703)
T 3v97_A 577 WAERNLRLNGLTGRAHRLIQADCLAWLRE--------------------------------------------------- 605 (703)
T ss_dssp HHHHHHHHTTCCSTTEEEEESCHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHcCCCccceEEEecCHHHHHHh---------------------------------------------------
Confidence 999999999997 699999998874311
Q ss_pred cccccccccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHH
Q 009628 379 SNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHG 458 (530)
Q Consensus 379 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~ 458 (530)
..++||+|++||||.+.+-.. .......
T Consensus 606 -------------------------------------------~~~~fD~Ii~DPP~f~~~~~~---------~~~~~~~ 633 (703)
T 3v97_A 606 -------------------------------------------ANEQFDLIFIDPPTFSNSKRM---------EDAFDVQ 633 (703)
T ss_dssp -------------------------------------------CCCCEEEEEECCCSBC----------------CCBHH
T ss_pred -------------------------------------------cCCCccEEEECCccccCCccc---------hhHHHHH
Confidence 125799999999996643211 1112334
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHH
Q 009628 459 KYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVR 495 (530)
Q Consensus 459 ~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~ 495 (530)
+.+++++..|.++|||||+|++|||+-+...+++...
T Consensus 634 ~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~ 670 (703)
T 3v97_A 634 RDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLA 670 (703)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHH
Confidence 4567999999999999999999999977777765543
No 16
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.58 E-value=2e-14 Score=141.63 Aligned_cols=164 Identities=16% Similarity=0.152 Sum_probs=113.3
Q ss_pred hHHHHHhcCCC-CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHHHhh
Q 009628 250 SIVTAHALDPQ-KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRR 327 (530)
Q Consensus 250 S~v~~~~Ldpq-pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~v~~ 327 (530)
+++.+.++.++ ++.+|||+|||+|..+..+|... .+.|+|+|+++..+..++++++..++.. ++++..|+....
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~-- 112 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT-- 112 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG--
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh--
Confidence 88899999999 99999999999999999998863 3499999999999999999999999974 999998875421
Q ss_pred cCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCC
Q 009628 328 KNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGR 407 (530)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 407 (530)
T Consensus 113 -------------------------------------------------------------------------------- 112 (259)
T 3lpm_A 113 -------------------------------------------------------------------------------- 112 (259)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccCCCcccCCCCCCCCCCCeEEEcCCCCCC---CCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecC
Q 009628 408 NQCLGGRAENSKGFSPNSFDRVLLDAPCSAL---GLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT 484 (530)
Q Consensus 408 ~~~~~g~~~~~~~f~~~sFDrVLlDaPCSgl---G~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCS 484 (530)
..+..++||.|++|||+... |....... ........ ......++..+.++|||||++++.
T Consensus 113 -----------~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~--~~~a~~~~-~~~~~~~l~~~~~~LkpgG~l~~~--- 175 (259)
T 3lpm_A 113 -----------DLIPKERADIVTCNPPYFATPDTSLKNTNEH--FRIARHEV-MCTLEDTIRVAASLLKQGGKANFV--- 175 (259)
T ss_dssp -----------GTSCTTCEEEEEECCCC--------------------------HHHHHHHHHHHHHEEEEEEEEEE---
T ss_pred -----------hhhccCCccEEEECCCCCCCccccCCCCchH--HHhhhccc-cCCHHHHHHHHHHHccCCcEEEEE---
Confidence 02345789999999999766 43211000 00000000 112248999999999999999984
Q ss_pred CCCCCCHHHHHHHHHhCCC--ceeecCCCCCCC
Q 009628 485 INPGENEALVRYALDRYKF--LSLAPQHPRIGG 515 (530)
Q Consensus 485 i~~~ENE~vV~~~L~~~~~--~~l~~~~p~~g~ 515 (530)
.+.+....+..++.++.. .++.+.+++.+.
T Consensus 176 -~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 207 (259)
T 3lpm_A 176 -HRPERLLDIIDIMRKYRLEPKRIQFVHPRSDR 207 (259)
T ss_dssp -ECTTTHHHHHHHHHHTTEEEEEEEEEESSTTS
T ss_pred -EcHHHHHHHHHHHHHCCCceEEEEEeecCCCC
Confidence 344566667777777643 233444444443
No 17
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.58 E-value=4e-15 Score=156.18 Aligned_cols=169 Identities=14% Similarity=0.125 Sum_probs=123.1
Q ss_pred ccccCCCccccccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 009628 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (530)
Q Consensus 228 ~v~~lP~~~~~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~ 307 (530)
..|.+....+.++|.|..|.....+...++ .+|++|||+|||+|+.+.++|.. ...+|+++|.|+..++.++++++
T Consensus 181 ~~f~v~~~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~ 256 (385)
T 2b78_A 181 ISYNVFLNDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFE 256 (385)
T ss_dssp EEEEECSSSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHH
T ss_pred EEEEEeccccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHH
Confidence 344555555567787766666666666554 67899999999999999999873 34589999999999999999999
Q ss_pred HhCCC--ceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccccccccccccc
Q 009628 308 EMGLK--CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVE 385 (530)
Q Consensus 308 ~~gl~--~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (530)
.+|++ +++++..|+.+.+...
T Consensus 257 ~n~~~~~~v~~~~~D~~~~l~~~--------------------------------------------------------- 279 (385)
T 2b78_A 257 ANHLDMANHQLVVMDVFDYFKYA--------------------------------------------------------- 279 (385)
T ss_dssp HTTCCCTTEEEEESCHHHHHHHH---------------------------------------------------------
T ss_pred HcCCCccceEEEECCHHHHHHHH---------------------------------------------------------
Confidence 99997 8999999987743110
Q ss_pred ccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHH
Q 009628 386 RTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMF 465 (530)
Q Consensus 386 ~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll 465 (530)
. ....+||.|++|||+.+.+.. .+.......++++
T Consensus 280 ---------~-------------------------~~~~~fD~Ii~DPP~~~~~~~-----------~~~~~~~~~~~ll 314 (385)
T 2b78_A 280 ---------R-------------------------RHHLTYDIIIIDPPSFARNKK-----------EVFSVSKDYHKLI 314 (385)
T ss_dssp ---------H-------------------------HTTCCEEEEEECCCCC----------------CCCCHHHHHHHHH
T ss_pred ---------H-------------------------HhCCCccEEEECCCCCCCChh-----------hHHHHHHHHHHHH
Confidence 0 012479999999999653210 0111223345899
Q ss_pred HHHHhcCCCCCEEEEEecCCCCC--CCHHHHHHHHHhCC
Q 009628 466 DQAVQLVRPGGIIVYSTCTINPG--ENEALVRYALDRYK 502 (530)
Q Consensus 466 ~~A~~lLkpGG~LVYSTCSi~~~--ENE~vV~~~L~~~~ 502 (530)
..+.++|+|||+|++|+|+-+.. +..+.++.++.++.
T Consensus 315 ~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g 353 (385)
T 2b78_A 315 RQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQK 353 (385)
T ss_dssp HHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999998763 34566777776654
No 18
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.56 E-value=2.6e-14 Score=147.39 Aligned_cols=103 Identities=18% Similarity=0.061 Sum_probs=83.1
Q ss_pred CceeeecCCccccCCCccccccceEEEeccchHHHHHhcC-CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHH
Q 009628 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (530)
Q Consensus 219 ~GlaV~~~~~v~~lP~~~~~~~G~i~lQd~~S~v~~~~Ld-pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~ 297 (530)
..+.++.....|.+.......+|.+..|......+...+. ..+|.+|||+|||+|+.+.++|.. + .+|+++|.|+.
T Consensus 110 ~~~~i~e~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~ 186 (332)
T 2igt_A 110 ETWPLSLLGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKK 186 (332)
T ss_dssp SEEEEEETTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHH
T ss_pred CceEEEECCEEEEEecCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHH
Confidence 4455666666677766666778888888876666665554 457889999999999999999873 3 39999999999
Q ss_pred HHHHHHHHHHHhCCCc--eEEEEcchhHH
Q 009628 298 KVMDIQKLAAEMGLKC--ITTYKLDALKA 324 (530)
Q Consensus 298 kv~~i~~~a~~~gl~~--i~~~~~Da~k~ 324 (530)
.+..++++++.+|+++ ++++..|+.+.
T Consensus 187 al~~a~~n~~~~gl~~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 187 AIGWAKENQVLAGLEQAPIRWICEDAMKF 215 (332)
T ss_dssp HHHHHHHHHHHHTCTTSCEEEECSCHHHH
T ss_pred HHHHHHHHHHHcCCCccceEEEECcHHHH
Confidence 9999999999999975 99999998774
No 19
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.54 E-value=3.9e-15 Score=157.06 Aligned_cols=65 Identities=11% Similarity=-0.047 Sum_probs=59.8
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc--eEEEEcchhHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC--ITTYKLDALKA 324 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~--i~~~~~Da~k~ 324 (530)
++|++|||||||+|++++++|..+++.++|+|+|+++..++.+++|++.+|+.+ ++++..|+.+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~ 117 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF 117 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH
Confidence 679999999999999999999987655799999999999999999999999987 99999998764
No 20
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.54 E-value=9.2e-14 Score=143.40 Aligned_cols=140 Identities=26% Similarity=0.270 Sum_probs=111.1
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCC
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~ 332 (530)
...+++++++.+|||+|||+|..+..+|...++...|+|+|+++..+..++++++..|+.+|++...|+.+..
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~------- 267 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP------- 267 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG-------
T ss_pred HHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc-------
Confidence 3455678899999999999999999999876456899999999999999999999999989999999976520
Q ss_pred CCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCC
Q 009628 333 DEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLG 412 (530)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 412 (530)
T Consensus 268 -------------------------------------------------------------------------------- 267 (354)
T 3tma_A 268 -------------------------------------------------------------------------------- 267 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHH
Q 009628 413 GRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEA 492 (530)
Q Consensus 413 g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~ 492 (530)
+...+||.|++|||| |.+ ......+..+++++++.+.++|||||++++.|| |++
T Consensus 268 --------~~~~~~D~Ii~npPy---g~r---------~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------~~~ 321 (354)
T 3tma_A 268 --------RFFPEVDRILANPPH---GLR---------LGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------RPA 321 (354)
T ss_dssp --------GTCCCCSEEEECCCS---CC-------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------CHH
T ss_pred --------cccCCCCEEEECCCC---cCc---------cCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------CHH
Confidence 122458999999999 322 122233455677999999999999999999998 577
Q ss_pred HHHHHHHhCCCceee
Q 009628 493 LVRYALDRYKFLSLA 507 (530)
Q Consensus 493 vV~~~L~~~~~~~l~ 507 (530)
.++.+++ .+++..
T Consensus 322 ~~~~~~~--~g~~~~ 334 (354)
T 3tma_A 322 LLKRALP--PGFALR 334 (354)
T ss_dssp HHHHHCC--TTEEEE
T ss_pred HHHHHhh--cCcEEE
Confidence 8888776 345544
No 21
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.52 E-value=8.6e-15 Score=153.73 Aligned_cols=63 Identities=22% Similarity=0.099 Sum_probs=57.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh---------------CCCceEEEEcchhHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM---------------GLKCITTYKLDALKA 324 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~---------------gl~~i~~~~~Da~k~ 324 (530)
+|.+|||+|||+|.+++++|..++. .+|+|+|+++..++.+++|++.+ |+.++++++.|+.+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHH
Confidence 7899999999999999999998753 57999999999999999999999 887799999998764
No 22
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.51 E-value=1.4e-13 Score=132.12 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=68.9
Q ss_pred EeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 245 lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
++.....+...++...++.+|||+|||+|..|.++|..+++.++|+++|+++.++..+++++++.|+.. |+++..|+.+
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 444455566666666788999999999999999999988767899999999999999999999999975 9999999876
Q ss_pred H
Q 009628 324 A 324 (530)
Q Consensus 324 ~ 324 (530)
.
T Consensus 122 ~ 122 (221)
T 3u81_A 122 L 122 (221)
T ss_dssp H
T ss_pred H
Confidence 4
No 23
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.50 E-value=4e-14 Score=135.61 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=59.2
Q ss_pred HhcC--CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCceEEEEcchh
Q 009628 255 HALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDAL 322 (530)
Q Consensus 255 ~~Ld--pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~ 322 (530)
.++. ++++.+|||+|||+|.+|.+++.++++.++|+++|.++.++..+++++++.| ..+++++..|+.
T Consensus 69 ~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 143 (226)
T 1i1n_A 69 ELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR 143 (226)
T ss_dssp HHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred HHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc
Confidence 3444 7899999999999999999999998777899999999999999999999876 456888887764
No 24
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.50 E-value=1.2e-13 Score=134.68 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=66.1
Q ss_pred chHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 249 ~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
........+++++|.+|||+|||+|..+.+++..+++.++|+++|.|+.+++.++++++..|+.+ ++++..|+.
T Consensus 81 ~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 81 DAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY 155 (255)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG
T ss_pred HHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh
Confidence 34456677889999999999999999999999988878999999999999999999999999987 888888764
No 25
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=1.9e-13 Score=134.22 Aligned_cols=79 Identities=16% Similarity=0.170 Sum_probs=67.9
Q ss_pred eccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchhHH
Q 009628 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKA 324 (530)
Q Consensus 246 Qd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~k~ 324 (530)
+.....+...++...++.+|||+|||+|..|.++|..+.+.++|+++|+++.++..+++++++.|+. +|+++..|+.+.
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 127 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS 127 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 3444555555556678999999999999999999998876799999999999999999999999997 699999998764
No 26
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.48 E-value=2.8e-13 Score=134.66 Aligned_cols=148 Identities=21% Similarity=0.218 Sum_probs=109.1
Q ss_pred chHHHHHhcCC--CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHh
Q 009628 249 PSIVTAHALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326 (530)
Q Consensus 249 ~S~v~~~~Ldp--qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~ 326 (530)
...++..+++. .++.+|||+|||+|..+..++..+ +..+|+|+|.|+.++..++++++.+|+++++++..|+...
T Consensus 95 te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-- 171 (276)
T 2b3t_A 95 TECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-- 171 (276)
T ss_dssp HHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG--
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh--
Confidence 33444444332 678899999999999999999876 4579999999999999999999999998898888886431
Q ss_pred hcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCC
Q 009628 327 RKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPG 406 (530)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 406 (530)
T Consensus 172 -------------------------------------------------------------------------------- 171 (276)
T 2b3t_A 172 -------------------------------------------------------------------------------- 171 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCC----------cccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 009628 407 RNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGL----------RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGG 476 (530)
Q Consensus 407 ~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~----------rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG 476 (530)
+.+++||.|+++|||...+. .|+... ....+. ....++++.++.++|||||
T Consensus 172 --------------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al-~~~~~g----~~~~~~~l~~~~~~LkpgG 232 (276)
T 2b3t_A 172 --------------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTAL-VAADSG----MADIVHIIEQSRNALVSGG 232 (276)
T ss_dssp --------------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTT-BCHHHH----THHHHHHHHHHGGGEEEEE
T ss_pred --------------cccCCccEEEECCCCCCccccccChhhhhcCcHHHH-cCCCcH----HHHHHHHHHHHHHhcCCCC
Confidence 12357999999999988754 121111 000111 1244689999999999999
Q ss_pred EEEEEecCCCCCCCHHHHHHHHHhCC
Q 009628 477 IIVYSTCTINPGENEALVRYALDRYK 502 (530)
Q Consensus 477 ~LVYSTCSi~~~ENE~vV~~~L~~~~ 502 (530)
++++..+. .+.+.+..++++.+
T Consensus 233 ~l~~~~~~----~~~~~~~~~l~~~G 254 (276)
T 2b3t_A 233 FLLLEHGW----QQGEAVRQAFILAG 254 (276)
T ss_dssp EEEEECCS----SCHHHHHHHHHHTT
T ss_pred EEEEEECc----hHHHHHHHHHHHCC
Confidence 99998543 45666777787764
No 27
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.48 E-value=2.9e-13 Score=134.42 Aligned_cols=71 Identities=23% Similarity=0.298 Sum_probs=62.7
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
.....+++++|.+|||+|||+|..+..++..+++.++|+++|.|+.++..++++++..|+ .+++++..|+.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 174 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS 174 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 455677899999999999999999999999877778999999999999999999999998 56888777754
No 28
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.46 E-value=1.7e-13 Score=137.15 Aligned_cols=123 Identities=19% Similarity=0.276 Sum_probs=100.4
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHHHhhcCCCCCCCCc
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPNM 337 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~v~~~~~~~~~~~~ 337 (530)
.++|++|||+|||+|+.+..+|.... . +|+|+|.|+..++.++++++.+|+.+ ++++..|+.+.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~------------- 187 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF------------- 187 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-------------
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh-------------
Confidence 46899999999999999999998642 2 89999999999999999999999976 88888886431
Q ss_pred cCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCcccC
Q 009628 338 CNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAEN 417 (530)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~ 417 (530)
T Consensus 188 -------------------------------------------------------------------------------- 187 (278)
T 2frn_A 188 -------------------------------------------------------------------------------- 187 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCC---CCCCCHHHH
Q 009628 418 SKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTI---NPGENEALV 494 (530)
Q Consensus 418 ~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi---~~~ENE~vV 494 (530)
. ...+||+|++|+|++. .+++..+.++|||||+|++++|+- ...+..+.+
T Consensus 188 --~-~~~~fD~Vi~~~p~~~------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i 240 (278)
T 2frn_A 188 --P-GENIADRILMGYVVRT------------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETF 240 (278)
T ss_dssp --C-CCSCEEEEEECCCSSG------------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHH
T ss_pred --c-ccCCccEEEECCchhH------------------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHH
Confidence 0 1467999999999632 267788999999999999999984 345666777
Q ss_pred HHHHHhCCC
Q 009628 495 RYALDRYKF 503 (530)
Q Consensus 495 ~~~L~~~~~ 503 (530)
..++++...
T Consensus 241 ~~~~~~~G~ 249 (278)
T 2frn_A 241 KRITKEYGY 249 (278)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 777777653
No 29
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=1.6e-13 Score=136.43 Aligned_cols=83 Identities=14% Similarity=0.230 Sum_probs=60.1
Q ss_pred cceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCceEEEE
Q 009628 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYK 318 (530)
Q Consensus 240 ~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~-gl~~i~~~~ 318 (530)
.+...+++..+..+...+++++|.+|||+|||+|..+.+++..+.+.++|+++|.++.+++.+++++++. |+.+++++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~ 168 (275)
T 1yb2_A 89 RNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR 168 (275)
T ss_dssp -----------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC
T ss_pred ccccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 4455666666677778889999999999999999999999998766789999999999999999999988 888888887
Q ss_pred cchh
Q 009628 319 LDAL 322 (530)
Q Consensus 319 ~Da~ 322 (530)
.|+.
T Consensus 169 ~d~~ 172 (275)
T 1yb2_A 169 SDIA 172 (275)
T ss_dssp SCTT
T ss_pred Cchh
Confidence 7753
No 30
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.45 E-value=4.4e-13 Score=132.44 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=64.1
Q ss_pred chHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-C--CCceEEEEcchh
Q 009628 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-G--LKCITTYKLDAL 322 (530)
Q Consensus 249 ~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~-g--l~~i~~~~~Da~ 322 (530)
....+...+++++|.+|||+|||+|..+.+++..+++.++|+++|.++..+..++++++.. | ..+++++..|+.
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 3345566788999999999999999999999998777789999999999999999999988 7 667888887764
No 31
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.45 E-value=3.4e-13 Score=124.93 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=54.8
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.+++|.+|||+|||+|..|..+|.. .++|+|+|+|+.+++.+++++++.|+++++++..|.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~ 79 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGH 79 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH
Confidence 3578999999999999999999875 589999999999999999999999998888887554
No 32
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.44 E-value=1.6e-12 Score=122.57 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=110.0
Q ss_pred ceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcc
Q 009628 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (530)
|.+ .+..........+++++|.+|||+|||+|..+..+|... +.++|+|+|.|+.+++.+++++++.|+.+++++..|
T Consensus 21 g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 21 KLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp TTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred CcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 554 233333445567789999999999999999999999874 468999999999999999999999999889999888
Q ss_pred hhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhh
Q 009628 321 ALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRR 400 (530)
Q Consensus 321 a~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 400 (530)
+...+
T Consensus 99 ~~~~~--------------------------------------------------------------------------- 103 (204)
T 3e05_A 99 APEGL--------------------------------------------------------------------------- 103 (204)
T ss_dssp TTTTC---------------------------------------------------------------------------
T ss_pred hhhhh---------------------------------------------------------------------------
Confidence 64310
Q ss_pred ccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Q 009628 401 MRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480 (530)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVY 480 (530)
....+||.|+++.+.. ...++|.++.++|||||+|++
T Consensus 104 --------------------~~~~~~D~i~~~~~~~-----------------------~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 104 --------------------DDLPDPDRVFIGGSGG-----------------------MLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp --------------------TTSCCCSEEEESCCTT-----------------------CHHHHHHHHHHHCCTTCEEEE
T ss_pred --------------------hcCCCCCEEEECCCCc-----------------------CHHHHHHHHHHhcCCCeEEEE
Confidence 0125699999987651 122789999999999999999
Q ss_pred EecCCCCCCCHHHHHHHHHhCCC
Q 009628 481 STCTINPGENEALVRYALDRYKF 503 (530)
Q Consensus 481 STCSi~~~ENE~vV~~~L~~~~~ 503 (530)
++++. ++.+.+...++++.+
T Consensus 141 ~~~~~---~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 141 NAVTL---DTLTKAVEFLEDHGY 160 (204)
T ss_dssp EECBH---HHHHHHHHHHHHTTC
T ss_pred Eeccc---ccHHHHHHHHHHCCC
Confidence 98876 566777778887764
No 33
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.43 E-value=1.6e-12 Score=124.07 Aligned_cols=70 Identities=21% Similarity=0.349 Sum_probs=62.4
Q ss_pred HHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 009628 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (530)
Q Consensus 251 ~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~k 323 (530)
..+...+++.+|++|||+|||+|..+..+|.. .++|+|+|+|+.+++.++++++++|++ +++++..|+..
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 34556778899999999999999999999986 579999999999999999999999998 89999988754
No 34
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.42 E-value=3.3e-13 Score=128.08 Aligned_cols=133 Identities=19% Similarity=0.303 Sum_probs=92.6
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCCcc
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~~ 338 (530)
+++|.+|||+|||||++|..+|+. .++|+|+|+++.+ .+.+++++..|+.....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~------------ 76 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFKETI------------ 76 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSH------------
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCCeEEEEccccCHHH------------
Confidence 578999999999999999999886 6899999999752 34578888888653100
Q ss_pred CCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCcccCC
Q 009628 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENS 418 (530)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~ 418 (530)
...+...+..
T Consensus 77 ----------------------------------------------------~~~~~~~~~~------------------ 86 (191)
T 3dou_A 77 ----------------------------------------------------FDDIDRALRE------------------ 86 (191)
T ss_dssp ----------------------------------------------------HHHHHHHHHH------------------
T ss_pred ----------------------------------------------------HHHHHHHhhc------------------
Confidence 0000000000
Q ss_pred CCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHH
Q 009628 419 KGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYAL 498 (530)
Q Consensus 419 ~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L 498 (530)
...++||+|++|+++...|.. ..+. ......+..+|+.|.++|||||+||.. +...++...+.+.|
T Consensus 87 --~~~~~~D~Vlsd~~~~~~g~~--------~~d~-~~~~~l~~~~l~~a~~~LkpGG~lv~k---~~~~~~~~~~~~~l 152 (191)
T 3dou_A 87 --EGIEKVDDVVSDAMAKVSGIP--------SRDH-AVSYQIGQRVMEIAVRYLRNGGNVLLK---QFQGDMTNDFIAIW 152 (191)
T ss_dssp --HTCSSEEEEEECCCCCCCSCH--------HHHH-HHHHHHHHHHHHHHHHHEEEEEEEEEE---EECSTHHHHHHHHH
T ss_pred --ccCCcceEEecCCCcCCCCCc--------ccCH-HHHHHHHHHHHHHHHHHccCCCEEEEE---EcCCCCHHHHHHHH
Confidence 001379999999998877752 1222 223346779999999999999999954 45667777777888
Q ss_pred HhC
Q 009628 499 DRY 501 (530)
Q Consensus 499 ~~~ 501 (530)
+++
T Consensus 153 ~~~ 155 (191)
T 3dou_A 153 RKN 155 (191)
T ss_dssp GGG
T ss_pred HHh
Confidence 653
No 35
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.41 E-value=1.1e-12 Score=122.84 Aligned_cols=67 Identities=21% Similarity=0.346 Sum_probs=60.4
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k 323 (530)
+.+++|.+|||+|||+|..+..++..+++.++|+|+|.|+.++..+++++++.|+ .+++++..|+..
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 85 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQN 85 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGG
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 3567899999999999999999999887778999999999999999999999998 679999888654
No 36
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.40 E-value=6.5e-13 Score=130.91 Aligned_cols=64 Identities=20% Similarity=0.320 Sum_probs=57.4
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
|+++||++|||++||+|..|.++|...+++|.|+|+|.++.++..+++++++. .+|..+..|+.
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~ 136 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDAR 136 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTT
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEecc
Confidence 56899999999999999999999999999999999999999999998888754 57888877753
No 37
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.40 E-value=5.5e-12 Score=117.72 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=56.7
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
.+|.+|||+|||+|..+..++. ....+|+|+|.|+..++.++++++..++++++++..|+.+.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 105 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALS--RGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAV 105 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH--TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHH--CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHH
Confidence 5789999999999999998776 34568999999999999999999999998899999998764
No 38
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.40 E-value=8.3e-13 Score=133.34 Aligned_cols=63 Identities=17% Similarity=0.256 Sum_probs=56.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
.++|++|||||||+|+.+.++|.. +..+|+|+|.++..++.+++|++.+|+.+ |+++.+|+.+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~ 186 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD 186 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHH
Confidence 478999999999999999999875 34689999999999999999999999976 8899888643
No 39
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.39 E-value=1.6e-12 Score=124.15 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=67.1
Q ss_pred ccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 009628 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (530)
Q Consensus 247 d~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~ 324 (530)
.....+...++...++.+|||+|||+|..|.++|..+.+.++|+++|+++.++..+++++++.|+.+ |+++..|+...
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 44 PTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS 122 (223)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 4444555555566788999999999999999999988767899999999999999999999999976 99999998764
No 40
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.38 E-value=9.4e-13 Score=126.16 Aligned_cols=149 Identities=13% Similarity=0.132 Sum_probs=101.0
Q ss_pred CCCCCCeEEeeccC-CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCC
Q 009628 258 DPQKGERILDMCAA-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPN 336 (530)
Q Consensus 258 dpqpGe~VLDmCAA-PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~ 336 (530)
.+++|.+|||+||| +|..+..+|... .++|+|+|+|+..+..++++++..|+ +++++..|+...
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~------------ 116 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII------------ 116 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS------------
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh------------
Confidence 35789999999999 999999999876 57999999999999999999999998 788888875210
Q ss_pred ccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCccc
Q 009628 337 MCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAE 416 (530)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~ 416 (530)
T Consensus 117 -------------------------------------------------------------------------------- 116 (230)
T 3evz_A 117 -------------------------------------------------------------------------------- 116 (230)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHH
Q 009628 417 NSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRY 496 (530)
Q Consensus 417 ~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~ 496 (530)
..+..++||.|++|||+...+....... ......-........++|.++.++|||||+|++.+++-. ++.+.+..
T Consensus 117 --~~~~~~~fD~I~~npp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~ 191 (230)
T 3evz_A 117 --KGVVEGTFDVIFSAPPYYDKPLGRVLTE-REAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE--KLLNVIKE 191 (230)
T ss_dssp --TTTCCSCEEEEEECCCCC----------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH--HHHHHHHH
T ss_pred --hhcccCceeEEEECCCCcCCccccccCh-hhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH--hHHHHHHH
Confidence 0233478999999999966543111000 000000000001125899999999999999998765421 34455666
Q ss_pred HHHhCCCceee
Q 009628 497 ALDRYKFLSLA 507 (530)
Q Consensus 497 ~L~~~~~~~l~ 507 (530)
.+.++. +++.
T Consensus 192 ~l~~~g-~~~~ 201 (230)
T 3evz_A 192 RGIKLG-YSVK 201 (230)
T ss_dssp HHHHTT-CEEE
T ss_pred HHHHcC-CceE
Confidence 677764 3443
No 41
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.37 E-value=2.4e-12 Score=124.89 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=62.4
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC--ceEEEEcchhHH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALKA 324 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~k~ 324 (530)
....++++.+|||+|||+|..|..+|..+.+.++|+++|+++.++..+++++++.|+. +|+++..|+...
T Consensus 50 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~ 121 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV 121 (221)
T ss_dssp HHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH
T ss_pred HhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH
Confidence 3445666779999999999999999998877899999999999999999999999987 699999998764
No 42
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.36 E-value=4.1e-12 Score=132.38 Aligned_cols=81 Identities=15% Similarity=0.091 Sum_probs=63.3
Q ss_pred ceEEEeccchHHHHHh-cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEc
Q 009628 241 GEIFLQNLPSIVTAHA-LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~-LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~ 319 (530)
+....|+..+.+.... ....+|.+|||+| |+|..+..++.. +..++|+++|+|+.+++.++++++++|+++|+++..
T Consensus 151 ~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~ 228 (373)
T 2qm3_A 151 AYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTF 228 (373)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred eecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 3444555555554332 2345789999999 999999988764 445799999999999999999999999988999988
Q ss_pred chhH
Q 009628 320 DALK 323 (530)
Q Consensus 320 Da~k 323 (530)
|+.+
T Consensus 229 D~~~ 232 (373)
T 2qm3_A 229 DLRK 232 (373)
T ss_dssp CTTS
T ss_pred hhhh
Confidence 8643
No 43
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.35 E-value=4.5e-12 Score=129.57 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=61.7
Q ss_pred hHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----------CCceEEEE
Q 009628 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----------LKCITTYK 318 (530)
Q Consensus 250 S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g-----------l~~i~~~~ 318 (530)
.......+++++|.+|||+|||+|..+..+|..+++.++|+++|+++..+..++++++++| ..+++++.
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 4445567789999999999999999999999987777999999999999999999998764 24577777
Q ss_pred cchh
Q 009628 319 LDAL 322 (530)
Q Consensus 319 ~Da~ 322 (530)
.|+.
T Consensus 174 ~d~~ 177 (336)
T 2b25_A 174 KDIS 177 (336)
T ss_dssp SCTT
T ss_pred CChH
Confidence 7753
No 44
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.34 E-value=3.3e-12 Score=124.65 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=64.5
Q ss_pred hHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 009628 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (530)
Q Consensus 250 S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~ 324 (530)
..+...++...++.+|||+|||+|..|.++|..+.+.++|+++|+++..+..+++++++.|+.. |+++..|+...
T Consensus 59 ~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 134 (237)
T 3c3y_A 59 GQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA 134 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 3444444455677899999999999999999998777999999999999999999999999964 99999998764
No 45
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.34 E-value=4.6e-12 Score=115.76 Aligned_cols=69 Identities=19% Similarity=0.223 Sum_probs=58.9
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
.....++++++.+|||+|||+|..+.+++... +.++|+++|.|+.+++.+++++++.|++ ++ .+..|+.
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~ 85 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAP 85 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTT
T ss_pred HHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchH
Confidence 34455688999999999999999999998865 4589999999999999999999999987 67 7777653
No 46
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.33 E-value=8.6e-13 Score=127.24 Aligned_cols=82 Identities=24% Similarity=0.278 Sum_probs=70.7
Q ss_pred ceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEc
Q 009628 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKL 319 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~ 319 (530)
|....|...+.+...++.+.++.+|||+|||+|..+..+|..+. .++|+++|+++.++..+++++++.|+. .|.++..
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 44456777777777888888999999999999999999999875 589999999999999999999999985 4888888
Q ss_pred chhH
Q 009628 320 DALK 323 (530)
Q Consensus 320 Da~k 323 (530)
|+..
T Consensus 113 d~~~ 116 (233)
T 2gpy_A 113 DALQ 116 (233)
T ss_dssp CGGG
T ss_pred CHHH
Confidence 8754
No 47
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=3.9e-12 Score=127.01 Aligned_cols=79 Identities=16% Similarity=0.076 Sum_probs=64.3
Q ss_pred EEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 244 ~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+.|.........+..+++|++|||+|||+|..|..+|...+ .++|+|+|.++..++.++++++.+|++++.++..|+.+
T Consensus 102 ~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~ 180 (272)
T 3a27_A 102 WSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRD 180 (272)
T ss_dssp CCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred ECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHH
Confidence 33433333333345578999999999999999999998754 57999999999999999999999999999899888753
No 48
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.32 E-value=1.4e-11 Score=113.26 Aligned_cols=71 Identities=15% Similarity=0.088 Sum_probs=61.1
Q ss_pred chHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc--eEEEEcchh
Q 009628 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC--ITTYKLDAL 322 (530)
Q Consensus 249 ~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~--i~~~~~Da~ 322 (530)
.+......+.++++.+|||+|||+|..+..++.. ..+|+++|.++..+..++++++..++.+ ++++..|+.
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~ 112 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTT
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchh
Confidence 3445566677889999999999999999988875 5799999999999999999999999887 888888753
No 49
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.31 E-value=2.7e-12 Score=127.17 Aligned_cols=75 Identities=20% Similarity=0.242 Sum_probs=66.0
Q ss_pred cchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH---hCCC-ceEEEEcchhH
Q 009628 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE---MGLK-CITTYKLDALK 323 (530)
Q Consensus 248 ~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~---~gl~-~i~~~~~Da~k 323 (530)
..+++.+.++.+.++.+|||+|||+|..+..+|.... ...|+++|+++..+..++++++. .|+. .++++..|+..
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 5688888888889999999999999999999999753 47999999999999999999998 8886 48899888654
No 50
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=1.3e-11 Score=119.82 Aligned_cols=72 Identities=15% Similarity=0.181 Sum_probs=63.8
Q ss_pred HHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCceEEEEcchh
Q 009628 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDAL 322 (530)
Q Consensus 251 ~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~-gl~~i~~~~~Da~ 322 (530)
..+...+++++|.+|||+|||+|..+.+++..+++.++|+++|.++.++..++++++.. |..+++++..|+.
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~ 158 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLE 158 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGG
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchh
Confidence 34556778999999999999999999999998777789999999999999999999988 8777888888864
No 51
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.30 E-value=6.1e-13 Score=130.65 Aligned_cols=81 Identities=15% Similarity=0.138 Sum_probs=69.4
Q ss_pred EEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 244 ~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
.++.....+...++...++.+|||+|||+|..|.++|..+.+.++|+++|+++.++..+++++++.|+. +|+++..|+.
T Consensus 43 ~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~ 122 (242)
T 3r3h_A 43 QVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPAL 122 (242)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 344555556666666667889999999999999999998877899999999999999999999999996 6999999987
Q ss_pred HH
Q 009628 323 KA 324 (530)
Q Consensus 323 k~ 324 (530)
..
T Consensus 123 ~~ 124 (242)
T 3r3h_A 123 DT 124 (242)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 52
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.29 E-value=1.8e-12 Score=121.44 Aligned_cols=62 Identities=23% Similarity=0.280 Sum_probs=37.7
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.++.+|||+|||+|..+.+++... +..+|+++|.|+..+..++++++..++ +++++..|+.+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~ 90 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIE 90 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------CCHHHHHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHh
Confidence 789999999999999999999975 357999999999999999999988887 67777777665
No 53
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.29 E-value=7.5e-12 Score=118.88 Aligned_cols=61 Identities=13% Similarity=0.085 Sum_probs=54.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC--CceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl--~~i~~~~~Da~k 323 (530)
+|.+|||+|||+|..+..++.. ..++|+|+|.|+..++.++++++..|+ ++++++..|+..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~ 115 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLD 115 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHH
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHH
Confidence 6889999999999999887663 346999999999999999999999998 689999999865
No 54
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.29 E-value=1.3e-11 Score=118.56 Aligned_cols=62 Identities=29% Similarity=0.385 Sum_probs=52.9
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
+.+++|++|||+|||+|..|.++|...+ .|+|+|+|.|+.+++.+.+.+++. .++.++..|+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~ 114 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDA 114 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCT
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCC
Confidence 4578999999999999999999999887 789999999999998888888764 4677666664
No 55
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=7e-12 Score=119.65 Aligned_cols=78 Identities=14% Similarity=0.152 Sum_probs=66.4
Q ss_pred ccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 009628 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (530)
Q Consensus 247 d~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~ 324 (530)
.....+...++...++.+|||+|||+|..|.++|..+.+.++|+++|.++.++..+++++++.|+.+ |+++..|+...
T Consensus 50 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 50 PEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT 128 (225)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH
Confidence 3334455555566678899999999999999999988767999999999999999999999999976 99999998764
No 56
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.28 E-value=7.6e-12 Score=130.29 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=57.6
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHH
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v 325 (530)
.++++ |++|||+|||+|..|..+|.. .++|+|+|.|+..++.+++|++.+|+++++++..|+.+.+
T Consensus 209 ~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 209 VTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp HTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH
T ss_pred HhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH
Confidence 34444 689999999999999988863 3689999999999999999999999999999999987753
No 57
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.28 E-value=2.1e-11 Score=115.94 Aligned_cols=61 Identities=13% Similarity=0.065 Sum_probs=54.6
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+|.+|||+|||+|..+..++.. ...+|+|+|.|+.+++.++++++..|+++++++..|+..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~ 114 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMS 114 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHH
Confidence 6899999999999999887764 235999999999999999999999999889999999865
No 58
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.28 E-value=2e-11 Score=114.30 Aligned_cols=146 Identities=15% Similarity=0.216 Sum_probs=91.9
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCCc
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~ 337 (530)
+++|.+|||+|||||+.|.+++..+++ .++|+|+|.|+.. ...+++++..|+.+... ...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~-----~~~--- 80 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNM-----NNI--- 80 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSS-----CCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhh-----hhh---
Confidence 578999999999999999999998764 6899999999832 24567888888754200 000
Q ss_pred cCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhh---hhhhhhhccCCCCCCccCCCc
Q 009628 338 CNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKAD---TRKNMRRMRNGPGRNQCLGGR 414 (530)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~g~ 414 (530)
.+..|+...+ ....+.
T Consensus 81 ----------------------------------------------~~~~~i~~~~~~~~~~~~~--------------- 99 (201)
T 2plw_A 81 ----------------------------------------------KNINYIDNMNNNSVDYKLK--------------- 99 (201)
T ss_dssp ---------------------------------------------------------CHHHHHHH---------------
T ss_pred ----------------------------------------------ccccccccccchhhHHHHH---------------
Confidence 0000110000 000000
Q ss_pred ccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHH
Q 009628 415 AENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALV 494 (530)
Q Consensus 415 ~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV 494 (530)
..+...+||.|++|.++...|.. . .+.......+.++|..+.++|||||.++.++.. .++...+
T Consensus 100 ----~~~~~~~fD~v~~~~~~~~~g~~--------~-~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~---~~~~~~l 163 (201)
T 2plw_A 100 ----EILQDKKIDIILSDAAVPCIGNK--------I-DDHLNSCELTLSITHFMEQYINIGGTYIVKMYL---GSQTNNL 163 (201)
T ss_dssp ----HHHTTCCEEEEEECCCCCCCSCH--------H-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC---STTHHHH
T ss_pred ----hhcCCCcccEEEeCCCcCCCCCc--------c-cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC---CCCHHHH
Confidence 01344689999999876544431 1 112223345678999999999999999986543 4566666
Q ss_pred HHHHHh
Q 009628 495 RYALDR 500 (530)
Q Consensus 495 ~~~L~~ 500 (530)
.+.|..
T Consensus 164 ~~~l~~ 169 (201)
T 2plw_A 164 KTYLKG 169 (201)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 677765
No 59
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.27 E-value=6.7e-11 Score=114.09 Aligned_cols=68 Identities=21% Similarity=0.305 Sum_probs=59.0
Q ss_pred HHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcch
Q 009628 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDA 321 (530)
Q Consensus 251 ~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da 321 (530)
..+...+++.+|.+|||+|||+|..+..++.. .++|+++|.++.++..++++++..|+ .++++...|+
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 149 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDF 149 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCT
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcCh
Confidence 35556678899999999999999999999987 57999999999999999999999988 5677776664
No 60
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.26 E-value=8.8e-12 Score=126.21 Aligned_cols=137 Identities=12% Similarity=0.145 Sum_probs=100.9
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--C--CCceEEEEcchhHHHhhcCCCCCCCC
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G--LKCITTYKLDALKAVRRKNESNDEPN 336 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--g--l~~i~~~~~Da~k~v~~~~~~~~~~~ 336 (530)
.+.+|||+|||+|+.+..++... +.++|+++|+|+..++.+++++.++ + ...++++..|+.+.+.
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~---------- 158 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR---------- 158 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG----------
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh----------
Confidence 45799999999999999998753 3579999999999999999987652 2 3568889998866321
Q ss_pred ccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCccc
Q 009628 337 MCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAE 416 (530)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~ 416 (530)
T Consensus 159 -------------------------------------------------------------------------------- 158 (296)
T 1inl_A 159 -------------------------------------------------------------------------------- 158 (296)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecC--CCCCCCHHHH
Q 009628 417 NSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT--INPGENEALV 494 (530)
Q Consensus 417 ~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCS--i~~~ENE~vV 494 (530)
..+++||.|++|+|+...|.... -++++++..+.++|||||+|++.+|+ +++.+...++
T Consensus 159 ----~~~~~fD~Ii~d~~~~~~~~~~~---------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 219 (296)
T 1inl_A 159 ----KFKNEFDVIIIDSTDPTAGQGGH---------------LFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAY 219 (296)
T ss_dssp ----GCSSCEEEEEEEC-------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHH
T ss_pred ----hCCCCceEEEEcCCCcccCchhh---------------hhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHH
Confidence 01357999999999742331111 13458899999999999999999998 5566777888
Q ss_pred HHHHHhCCCceee
Q 009628 495 RYALDRYKFLSLA 507 (530)
Q Consensus 495 ~~~L~~~~~~~l~ 507 (530)
+.+.+.++.+.+.
T Consensus 220 ~~l~~~F~~v~~~ 232 (296)
T 1inl_A 220 RRISKVFPITRVY 232 (296)
T ss_dssp HHHHHHCSEEEEE
T ss_pred HHHHHHCCceEEE
Confidence 8887888876553
No 61
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.26 E-value=4.9e-12 Score=119.99 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=62.1
Q ss_pred hHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 250 S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
..+...++...++.+|||+|||+|..|.++|..+.+.++|+++|.|+.++..+++++++.|+.. |+++..|+..
T Consensus 45 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 45 GRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp HHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred HHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 3444444444567899999999999999999987657899999999999999999999999864 9999998865
No 62
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.25 E-value=1.8e-11 Score=115.54 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=69.4
Q ss_pred cceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEc
Q 009628 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (530)
Q Consensus 240 ~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~ 319 (530)
.|..+.|..........++++++.+|||+|||+|..+.+++.. .++|+++|+|+.++..++++++.+|+++++++..
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3555555555556667788999999999999999999999987 4799999999999999999999999999999998
Q ss_pred chhH
Q 009628 320 DALK 323 (530)
Q Consensus 320 Da~k 323 (530)
|+.+
T Consensus 133 d~~~ 136 (210)
T 3lbf_A 133 DGWQ 136 (210)
T ss_dssp CGGG
T ss_pred Cccc
Confidence 8754
No 63
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.25 E-value=1.6e-11 Score=126.33 Aligned_cols=60 Identities=18% Similarity=0.170 Sum_probs=53.5
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k 323 (530)
++|++|||+|||+|+.+.+ |. ...+|+|+|.|+..+..++++++.+|+ .+++++..|+.+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~ 254 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVRE 254 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHH
Confidence 5899999999999999988 76 367999999999999999999999998 469999888653
No 64
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.25 E-value=1.7e-11 Score=120.74 Aligned_cols=79 Identities=14% Similarity=0.102 Sum_probs=66.1
Q ss_pred eccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchhHH
Q 009628 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKA 324 (530)
Q Consensus 246 Qd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~k~ 324 (530)
+.....+...++...++.+|||+|||+|..|..+|..+.+.++|+++|+++.++..+++++++.|+. .|+++..|+...
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 143 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV 143 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH
Confidence 3333444445555567789999999999999999999876799999999999999999999999985 599999998764
No 65
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.25 E-value=2.7e-11 Score=118.87 Aligned_cols=62 Identities=21% Similarity=0.197 Sum_probs=55.3
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
+++|.+|||+|||+|..+..+|.. ..++|+++|.|+..+..++++++..|+.. ++++..|+.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 106 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD 106 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh
Confidence 678999999999999999999885 45699999999999999999999999865 888888753
No 66
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.25 E-value=3.7e-11 Score=113.71 Aligned_cols=71 Identities=18% Similarity=0.268 Sum_probs=63.0
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.....++++++.+|||+|||+|..+..++...++.++|+++|.|+..+..++++++..++.+++++..|+.
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 98 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc
Confidence 34456678899999999999999999999987667899999999999999999999999988988888853
No 67
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.24 E-value=4.2e-11 Score=110.03 Aligned_cols=63 Identities=24% Similarity=0.258 Sum_probs=56.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~k 323 (530)
..++.+|||+|||+|..+..++.. +.++|+++|.|+..++.++++++..|+. +++++..|+.+
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 568899999999999999998874 4479999999999999999999999985 69999998866
No 68
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.24 E-value=1.1e-11 Score=124.86 Aligned_cols=63 Identities=21% Similarity=0.177 Sum_probs=56.7
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
..++.+|||+|||+|..+.++|.. +..+|+|+|+|+..+..++++++.+|+.+ ++++..|+..
T Consensus 121 ~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~ 184 (284)
T 1nv8_A 121 KYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE 184 (284)
T ss_dssp HHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG
T ss_pred ccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh
Confidence 346789999999999999999987 56899999999999999999999999986 9999988754
No 69
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.23 E-value=4.1e-11 Score=114.94 Aligned_cols=63 Identities=6% Similarity=0.092 Sum_probs=57.3
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.++.+|||+|||+|..+.++|... +...|+|+|+|+.++..+++++++.|+++|.++..|+..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~ 99 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT 99 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH
Confidence 468899999999999999999875 457999999999999999999999999999999999765
No 70
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.23 E-value=7.2e-11 Score=114.47 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=56.1
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcch
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDA 321 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da 321 (530)
.+.++.+|||+|||+|..+..++.... ++|+++|.|+..+..++++++..|+.+ ++++..|+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 105 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM 105 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 567899999999999999999999763 499999999999999999999999876 88888886
No 71
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.23 E-value=2.4e-11 Score=118.10 Aligned_cols=65 Identities=22% Similarity=0.177 Sum_probs=58.3
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+++++.+|||+|||+|..+..+|... ..++|+|+|.|+.++..++++++++|+++|+++..|+..
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 131 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAET 131 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHH
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHH
Confidence 44678999999999999999999854 457999999999999999999999999889999999865
No 72
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.22 E-value=4.7e-11 Score=121.40 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=64.3
Q ss_pred HHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 251 ~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+...+++++|++|||+|||+|..+..+|......++|+++|.|+.+++.+++++++.|+.++++...|+.+
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~ 137 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY 137 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred HHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh
Confidence 3445567899999999999999999999999876568999999999999999999999999889998888653
No 73
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.21 E-value=4.4e-11 Score=113.90 Aligned_cols=62 Identities=11% Similarity=0.119 Sum_probs=56.4
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.++.+|||+|||+|..+.++|.... ...|+|+|+|+..+..++++++..|++++.++..|+.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 101 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS 101 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHH
Confidence 5688999999999999999998753 5799999999999999999999999989999998864
No 74
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.21 E-value=1.8e-11 Score=118.69 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=65.1
Q ss_pred EeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 009628 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (530)
Q Consensus 245 lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~k 323 (530)
.|.....+...++...++.+|||+|||+|..|..+|... +.++|+++|+++.++..+++++++.|+. +|+++..|+..
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 344444555566666788999999999999999999843 4689999999999999999999999986 79999998765
No 75
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.21 E-value=7.9e-11 Score=122.85 Aligned_cols=64 Identities=20% Similarity=0.298 Sum_probs=57.3
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k 323 (530)
+++|.+|||+|||+|+.+..+|.. ...+.|+|+|+|+..+..++++++..|+ .+|++...|+.+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~-~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALR-RYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQ 279 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHT-TCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGG
T ss_pred cCCCCEEEEccCcCcHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 789999999999999999999875 3446899999999999999999999999 569999998765
No 76
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=3e-10 Score=103.47 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=60.6
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.....+++.++.+|||+|||+|..+..++. ...+|+++|.|+..+..++++++..|+++++++..|+..
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 344556788999999999999999998887 467999999999999999999999999889999988764
No 77
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.20 E-value=4.8e-11 Score=117.82 Aligned_cols=64 Identities=25% Similarity=0.185 Sum_probs=58.7
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
++++.+|||+|||+|..+..+|... +.++|+++|.|+.++..++++++++|+++|+++..|+..
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~ 141 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEV 141 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHH
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHH
Confidence 4678999999999999999999875 458999999999999999999999999999999999865
No 78
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.19 E-value=3.9e-11 Score=121.08 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=59.4
Q ss_pred HHHhcC-CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 253 TAHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 253 ~~~~Ld-pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
+...++ +++|.+|||+|||+|..+..++... ..+|+++|.|+.++..++++++..|+. +++++..|+.
T Consensus 108 l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 108 LMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML 177 (312)
T ss_dssp HHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 445566 7899999999999999999999875 368999999999999999999999986 6888888863
No 79
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.19 E-value=5.2e-11 Score=114.87 Aligned_cols=64 Identities=27% Similarity=0.342 Sum_probs=56.1
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+++++|++|||++||+|..+.++|...++.++|+|+|.|+..+..+.+++++. .+++++..|+.
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~ 136 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDAR 136 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTT
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccC
Confidence 45789999999999999999999998766789999999999999999998876 66888887764
No 80
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.19 E-value=5.8e-11 Score=111.84 Aligned_cols=62 Identities=24% Similarity=0.166 Sum_probs=54.6
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
++++.+|||+|||+|..+..++.. +.++|+|+|.|+.++..++++++..++.+++++..|+.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 119 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL 119 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc
Confidence 578999999999999999998873 45699999999999999999999999887888887753
No 81
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.18 E-value=7.7e-11 Score=113.71 Aligned_cols=72 Identities=21% Similarity=0.177 Sum_probs=61.8
Q ss_pred chHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 009628 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (530)
Q Consensus 249 ~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k 323 (530)
...++..+....+|.+|||+|||+|+.+.++|.. .++|+|+|.|+.++..++++++..|+ .+++++..|+..
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 138 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL 138 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH
Confidence 3444555555568999999999999999999984 37999999999999999999999999 579999999865
No 82
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.18 E-value=1.1e-10 Score=107.46 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=56.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhHH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k~ 324 (530)
..++.+|||+|||+|..+..++. ....+|+++|.|+..+..++++++..++ .+++++..|+...
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVS--RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 35789999999999999998887 3457999999999999999999999998 4699999998763
No 83
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.18 E-value=8.5e-11 Score=113.70 Aligned_cols=64 Identities=19% Similarity=0.174 Sum_probs=58.2
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
.++.+|||+|||+|..+..+|... +...|+|+|+|+.++..+++++++.|++++.++..|+...
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~ 96 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV 96 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence 368899999999999999999865 4579999999999999999999999999999999998764
No 84
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.18 E-value=8.2e-11 Score=107.88 Aligned_cols=70 Identities=23% Similarity=0.301 Sum_probs=60.6
Q ss_pred HHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 009628 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (530)
Q Consensus 251 ~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k 323 (530)
......+++.++.+|||+|||+|..+..++... ++|+++|.|+..+..++++++..|+ .++.++..|+..
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 344555678899999999999999999888754 7999999999999999999999998 678888888754
No 85
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.18 E-value=1.6e-10 Score=117.66 Aligned_cols=67 Identities=16% Similarity=0.081 Sum_probs=57.8
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
++.+++|++|||+|||||+.|..++... ..++|+|+|+|+.+++.+++++++.|+.+|++...|+..
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~ 183 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV 183 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh
Confidence 5788999999999999999886554433 257999999999999999999999999889999998754
No 86
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.18 E-value=3.3e-11 Score=116.72 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=65.7
Q ss_pred EeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 245 lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.|+..+.-....++++++.+|||+|||+|..+..++... ++|+++|.|+.++..++++++..|+.++.++..|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 78 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA 78 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc
Confidence 466778888999999999999999999999999888753 58999999999999999999999998888888875
No 87
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.17 E-value=4.4e-11 Score=116.73 Aligned_cols=82 Identities=17% Similarity=0.174 Sum_probs=63.8
Q ss_pred cccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEE
Q 009628 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317 (530)
Q Consensus 238 ~~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~ 317 (530)
+.+.....|..........+.++++.+|||+|||+|..+..++... ++|+++|.|+.++..+++++++.|+.++.++
T Consensus 14 ~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~ 90 (260)
T 1vl5_A 14 YVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYV 90 (260)
T ss_dssp ---------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred eecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEE
Confidence 3455566677777777778888999999999999999999888753 4999999999999999999999998888888
Q ss_pred Ecchh
Q 009628 318 KLDAL 322 (530)
Q Consensus 318 ~~Da~ 322 (530)
..|+.
T Consensus 91 ~~d~~ 95 (260)
T 1vl5_A 91 QGDAE 95 (260)
T ss_dssp ECCC-
T ss_pred EecHH
Confidence 88753
No 88
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.17 E-value=1.4e-10 Score=121.40 Aligned_cols=74 Identities=16% Similarity=0.040 Sum_probs=61.8
Q ss_pred cchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC---ceEEEEcchh
Q 009628 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK---CITTYKLDAL 322 (530)
Q Consensus 248 ~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~---~i~~~~~Da~ 322 (530)
..+.+....+.+.++.+|||+|||+|..+..++... +..+|+++|.|+..++.++++++.+|+. .++++..|+.
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh
Confidence 345566777888888999999999999999999864 4579999999999999999999999875 3666766643
No 89
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.16 E-value=1.5e-10 Score=104.06 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=92.0
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCCcc
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~~ 338 (530)
++++.+|||+|||+|..+.+++..++..++|+++|.++ .+. +.+++++..|+......
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~----------- 77 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVM----------- 77 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHH-----------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhh-----------
Confidence 67899999999999999999999876668999999998 532 25677777776432000
Q ss_pred CCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCcccCC
Q 009628 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENS 418 (530)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~ 418 (530)
.++..
T Consensus 78 -----------------------------------------------------~~~~~---------------------- 82 (180)
T 1ej0_A 78 -----------------------------------------------------KALLE---------------------- 82 (180)
T ss_dssp -----------------------------------------------------HHHHH----------------------
T ss_pred -----------------------------------------------------hhhhc----------------------
Confidence 00000
Q ss_pred CCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHH
Q 009628 419 KGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYAL 498 (530)
Q Consensus 419 ~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L 498 (530)
.+.+++||.|++|+|+...|.. . .+-.....++.+++..+.++|||||.++.++.. .++...+...+
T Consensus 83 -~~~~~~~D~i~~~~~~~~~~~~--------~-~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~~ 149 (180)
T 1ej0_A 83 -RVGDSKVQVVMSDMAPNMSGTP--------A-VDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ---GEGFDEYLREI 149 (180)
T ss_dssp -HHTTCCEEEEEECCCCCCCSCH--------H-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES---STTHHHHHHHH
T ss_pred -cCCCCceeEEEECCCccccCCC--------c-cchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec---CCcHHHHHHHH
Confidence 1234689999999998776642 1 111223345679999999999999999987643 35555555566
Q ss_pred Hh
Q 009628 499 DR 500 (530)
Q Consensus 499 ~~ 500 (530)
..
T Consensus 150 ~~ 151 (180)
T 1ej0_A 150 RS 151 (180)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 90
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.16 E-value=1.2e-10 Score=111.59 Aligned_cols=62 Identities=18% Similarity=0.283 Sum_probs=55.4
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+++|++|||+|||+|..+.++|..+++.+.|+++|.|+.++..+++++++. .+++++..|+.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~ 132 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDAT 132 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTT
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCC
Confidence 789999999999999999999998876789999999999999999988765 67888888864
No 91
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.16 E-value=1.1e-10 Score=113.25 Aligned_cols=68 Identities=22% Similarity=0.198 Sum_probs=59.1
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
....+.+++|.+|||++||+|..+..+|... ..+|+++|.|+..+..++++++..|+. +++++..|+.
T Consensus 28 l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 28 LGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp HHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH
Confidence 3445678899999999999999999999876 368999999999999999999999985 6888888753
No 92
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=2.7e-10 Score=107.88 Aligned_cols=71 Identities=17% Similarity=0.308 Sum_probs=63.0
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.....+.++++.+|||+|||+|..+..++...++.++|+++|.|+.++..++++++..|+.+++++..|+.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 138 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGT 138 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGG
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc
Confidence 44556788999999999999999999999988666899999999999999999999999988888888763
No 93
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.16 E-value=3.4e-10 Score=106.50 Aligned_cols=62 Identities=18% Similarity=0.145 Sum_probs=54.1
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.+.+|.+|||+|||+|..+..++.. +.++|+|+|.|+..+..++++++..|+ +++++..|+.
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~ 107 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVS 107 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGG
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchH
Confidence 5678999999999999999999874 345899999999999999999998888 7888888764
No 94
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.15 E-value=7.2e-11 Score=112.91 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=59.2
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcC----CCcEEEEEeCCHHHHHHHHHHHHHhC-----CCceEEEEcchhH
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLR----DEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDALK 323 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~----~~G~VvA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~k 323 (530)
.+++|.+|||+|||+|..+.+++..++ +.++|+++|+++.++..+++++++.+ ..+++++..|+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 151 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ 151 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh
Confidence 578999999999999999999999876 56899999999999999999999988 5778888888654
No 95
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.15 E-value=1.1e-10 Score=113.25 Aligned_cols=73 Identities=19% Similarity=0.212 Sum_probs=62.0
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~ 324 (530)
+...++...++.+|||+|||+|..|..+|..+.+.++|+++|.++..+..+++++++.|+.. |+++..|+...
T Consensus 63 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 63 FLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 33334444567899999999999999999988767899999999999999999999999864 99999998653
No 96
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.15 E-value=2.5e-11 Score=124.74 Aligned_cols=64 Identities=19% Similarity=0.063 Sum_probs=55.4
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDE----GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~----G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+++++.+|||.|||+|+.+..++..+... ..|+|+|+++..+..++.++...|+ .+.++..|++
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l 194 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGL 194 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTT
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCC
Confidence 67788999999999999999999887543 7999999999999999999988887 5677777753
No 97
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.14 E-value=7.8e-11 Score=114.98 Aligned_cols=52 Identities=21% Similarity=0.160 Sum_probs=44.2
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEM 309 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm-~~~G~VvA~D~s~~kv~~i~~~a~~~ 309 (530)
...++.+|||+|||+|..+..++..+ ....+|+|+|+|+..++.++++++..
T Consensus 48 ~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 48 PGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred ccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 34567899999999999999999874 23468999999999999999888765
No 98
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.14 E-value=7.9e-11 Score=114.96 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=56.6
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--------CCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--------GLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--------gl~~i~~~~~Da~k 323 (530)
++++.+|||+|||+|+.+.++|... +.+.|+|+|+|...+..++++++.+ |+.++.++..|+.+
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~ 118 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMK 118 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHH
Confidence 4578899999999999999999875 4579999999999999999999887 88889999998754
No 99
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.14 E-value=1.2e-10 Score=111.90 Aligned_cols=72 Identities=15% Similarity=0.160 Sum_probs=60.1
Q ss_pred HHHHHhc--CCCCCCeEEeeccCCChHHHHHHHHcCC-----CcEEEEEeCCHHHHHHHHHHHHHhC-----CCceEEEE
Q 009628 251 IVTAHAL--DPQKGERILDMCAAPGGKTTAIASLLRD-----EGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYK 318 (530)
Q Consensus 251 ~v~~~~L--dpqpGe~VLDmCAAPGgKT~~iA~lm~~-----~G~VvA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~ 318 (530)
......| .+++|.+|||+|||+|..|.+++.+++. +++|+++|+++..+..+++++++.| ..+++++.
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 3444555 5789999999999999999999998753 4699999999999999999998877 56788887
Q ss_pred cchh
Q 009628 319 LDAL 322 (530)
Q Consensus 319 ~Da~ 322 (530)
.|+.
T Consensus 152 ~d~~ 155 (227)
T 1r18_A 152 GDGR 155 (227)
T ss_dssp SCGG
T ss_pred CCcc
Confidence 7754
No 100
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.14 E-value=4.3e-11 Score=121.35 Aligned_cols=74 Identities=16% Similarity=0.212 Sum_probs=58.8
Q ss_pred eccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 246 Qd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+......++..++++++++|||+|||+|..|..++.. .++|+|+|+++..+..++++++..++.+++++..|+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 4434455566788899999999999999999998874 4699999999999999999998888888888877754
No 101
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.14 E-value=1.2e-10 Score=115.95 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=61.2
Q ss_pred eccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 246 Qd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
+++-..++... ++||.+|||+|||+|..|..||......| +|+|+|.|+.+++.++++++..+.. +|+++..|+.
T Consensus 57 ~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 57 ISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 44444455555 47899999999999999999999876544 9999999999999999999988865 5888888753
No 102
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.13 E-value=4.4e-10 Score=112.52 Aligned_cols=68 Identities=13% Similarity=0.072 Sum_probs=59.9
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
....+++++|.+|||+|||+|..+..+|...+ .+|+++|.|+..+..++++++..|+. +|+++..|+.
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 132 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE 132 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH
Confidence 45567889999999999999999999998764 78999999999999999999999987 6888888753
No 103
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.13 E-value=1.8e-10 Score=104.26 Aligned_cols=60 Identities=23% Similarity=0.156 Sum_probs=53.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
++.+|||+|||+|..+..++... ..|+++|.|+..+..++++++..++ +++++..|+.+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~ 100 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVF 100 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHH
Confidence 78899999999999999998852 2399999999999999999999998 889999998763
No 104
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.12 E-value=2e-10 Score=106.83 Aligned_cols=52 Identities=31% Similarity=0.316 Sum_probs=41.9
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCC--------cEEEEEeCCHHHHHHHHHHHHHhCCCceEEE-Ecch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDE--------GEVVAVDRSHNKVMDIQKLAAEMGLKCITTY-KLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~--------G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~-~~Da 321 (530)
+++|.+|||+|||||..+..++..++.. ++|+|+|+|+.+ .+.+++++ ..|.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~ 80 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADV 80 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccC
Confidence 5789999999999999999999988654 899999999842 23456666 6654
No 105
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.11 E-value=3.9e-11 Score=122.35 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=29.1
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeC
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~ 294 (530)
+++|.+|||+|||||++|..+|+. ++|+|+|.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~ 111 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKG 111 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEec
Confidence 478999999999999999999875 68999999
No 106
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.11 E-value=5.3e-11 Score=116.36 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=97.9
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHH---cCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCC
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASL---LRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~l---m~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~ 330 (530)
..+++..++.+|||+|||+|..|..+|.+ +.+.++|+|+|+|+.++..++ .++ .+|+++..|+.....
T Consensus 74 ~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~---- 144 (236)
T 2bm8_A 74 HDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTT---- 144 (236)
T ss_dssp HHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGG----
T ss_pred HHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHH----
Confidence 34455556789999999999999999998 567799999999998876544 222 468888877543100
Q ss_pred CCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCcc
Q 009628 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQC 410 (530)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 410 (530)
+
T Consensus 145 ----------------------------------------------------------l--------------------- 145 (236)
T 2bm8_A 145 ----------------------------------------------------------F--------------------- 145 (236)
T ss_dssp ----------------------------------------------------------G---------------------
T ss_pred ----------------------------------------------------------H---------------------
Confidence 0
Q ss_pred CCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHh-cCCCCCEEEEEe-cCCCCC
Q 009628 411 LGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQ-LVRPGGIIVYST-CTINPG 488 (530)
Q Consensus 411 ~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~-lLkpGG~LVYST-CSi~~~ 488 (530)
+.....+||.|++|+.- . . ..++|.++.+ +|||||+||++. |.+.+.
T Consensus 146 --------~~~~~~~fD~I~~d~~~------------~----------~-~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~ 194 (236)
T 2bm8_A 146 --------EHLREMAHPLIFIDNAH------------A----------N-TFNIMKWAVDHLLEEGDYFIIEDMIPYWYR 194 (236)
T ss_dssp --------GGGSSSCSSEEEEESSC------------S----------S-HHHHHHHHHHHTCCTTCEEEECSCHHHHHH
T ss_pred --------HhhccCCCCEEEECCch------------H----------h-HHHHHHHHHHhhCCCCCEEEEEeCcccccc
Confidence 00112369999998751 0 0 1267888886 999999999864 345556
Q ss_pred CCHHHHHHHHHhCC-CceeecC
Q 009628 489 ENEALVRYALDRYK-FLSLAPQ 509 (530)
Q Consensus 489 ENE~vV~~~L~~~~-~~~l~~~ 509 (530)
++++.+..++++++ .+++.+.
T Consensus 195 ~~~~~~~~~l~~~~~~f~~~~~ 216 (236)
T 2bm8_A 195 YAPQLFSEYLGAFRDVLSMDML 216 (236)
T ss_dssp HCHHHHHHHHHTTTTTEEEETT
T ss_pred cCHHHHHHHHHhCcccEEEcch
Confidence 77788999999998 6777654
No 107
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.09 E-value=1.9e-10 Score=107.86 Aligned_cols=66 Identities=21% Similarity=0.202 Sum_probs=56.3
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
...+.++++ +|||+|||+|..+..++.. ...+|+++|.|+..+..++++++..++. +++++..|+.
T Consensus 37 ~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 103 (219)
T 3dlc_A 37 INRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH 103 (219)
T ss_dssp HHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT
T ss_pred HHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH
Confidence 344566777 9999999999999999986 4579999999999999999999999985 5888888753
No 108
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.09 E-value=1.6e-10 Score=110.43 Aligned_cols=71 Identities=20% Similarity=0.123 Sum_probs=61.8
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhHH
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k~ 324 (530)
..++...++.+|||+|||+|..|.++|..+.+.++|+++|.++.++..++++++..|+ ..|+++..|+...
T Consensus 62 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 62 ANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH
Confidence 3444456788999999999999999999877678999999999999999999999998 4699999998764
No 109
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.09 E-value=4.7e-10 Score=108.68 Aligned_cols=74 Identities=22% Similarity=0.194 Sum_probs=64.5
Q ss_pred HHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 009628 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (530)
Q Consensus 251 ~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~ 324 (530)
.+...++...++.+|||+|||+|..|..+|..+...++|+++|+++..+..+++++++.|+.+ |+++..|+...
T Consensus 50 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 50 QFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 344455566789999999999999999999988767899999999999999999999999976 99999998764
No 110
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.09 E-value=8.8e-10 Score=117.30 Aligned_cols=65 Identities=15% Similarity=0.083 Sum_probs=56.5
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.++++.++++|||+|||+|..+..+|.. ..+|+|+|.|+..++.++++++.+|++ ++++..|+.+
T Consensus 284 ~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~ 348 (425)
T 2jjq_A 284 KVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDRE 348 (425)
T ss_dssp HHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTT
T ss_pred HhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHH
Confidence 3333678999999999999999999874 358999999999999999999999998 9999888643
No 111
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.08 E-value=3.2e-10 Score=107.64 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=55.7
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----ceEEEEcch
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDA 321 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-----~i~~~~~Da 321 (530)
+...+...++.+|||+|||+|..+..++... ...+|+++|.|+..+..++++++..++. +++++..|+
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 3445556788999999999999999998843 3469999999999999999998887775 577777764
No 112
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.07 E-value=2.2e-09 Score=105.23 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=57.4
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
+++|++|||+|||+|..+..+|.. +..++|+|+|+++..+..+++|++.+|+++ |++...|.+.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~ 77 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA 77 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh
Confidence 468999999999999999999884 456799999999999999999999999975 9999998764
No 113
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.07 E-value=1.1e-09 Score=101.34 Aligned_cols=71 Identities=17% Similarity=0.182 Sum_probs=60.7
Q ss_pred chHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 249 ~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+.......++..++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..++++++++..|+.
T Consensus 20 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 90 (199)
T 2xvm_A 20 THSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN 90 (199)
T ss_dssp CCHHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG
T ss_pred ccHHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh
Confidence 3345556677778899999999999999999885 4699999999999999999999999878888888864
No 114
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.07 E-value=3.9e-10 Score=108.99 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=67.0
Q ss_pred cceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEc
Q 009628 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (530)
Q Consensus 240 ~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~ 319 (530)
.|....|..-.......++++++.+|||+|||+|..+..++.... ++|+++|+++..+..++++++..|+.+++++..
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 70 AGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp TTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 444444444444556667889999999999999999999999875 789999999999999999999999988888888
Q ss_pred ch
Q 009628 320 DA 321 (530)
Q Consensus 320 Da 321 (530)
|+
T Consensus 148 d~ 149 (235)
T 1jg1_A 148 DG 149 (235)
T ss_dssp CG
T ss_pred Cc
Confidence 76
No 115
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.06 E-value=6.6e-10 Score=118.18 Aligned_cols=66 Identities=29% Similarity=0.294 Sum_probs=59.5
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+++.++++|||+|||+|..+..+|.. .++|+|+|.|+..++.++++++.+|+++++++..|+.+
T Consensus 280 ~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 280 EWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp HHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTS
T ss_pred HhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 4467788999999999999999999875 57999999999999999999999999999999998754
No 116
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.06 E-value=3.7e-10 Score=108.99 Aligned_cols=63 Identities=21% Similarity=0.266 Sum_probs=54.6
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+++++|.+|||+|||+|..+.++|...+ .++|+|+|.|+.++..++++++.. +++.++..|+.
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~ 132 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDAN 132 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTT
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCC
Confidence 4567899999999999999999999876 689999999999999999887765 67888888764
No 117
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.05 E-value=6.7e-10 Score=116.58 Aligned_cols=60 Identities=28% Similarity=0.357 Sum_probs=52.8
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
..+|.+|||+|||+|..+..++.. ..+|+++|.|+..++.++++++.++++ ++++..|+.
T Consensus 231 ~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~ 290 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVD 290 (381)
T ss_dssp TTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTT
T ss_pred CCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchh
Confidence 357899999999999999999885 359999999999999999999999876 777877764
No 118
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.04 E-value=4.9e-10 Score=109.65 Aligned_cols=64 Identities=16% Similarity=0.218 Sum_probs=53.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH------hCCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE------MGLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~------~gl~~i~~~~~Da~k 323 (530)
..++.+|||+|||.|..+.++|... +...|+|+|+|+.++..++++++. .++.+|.++..|+.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~ 113 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK 113 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH
Confidence 3567899999999999999999864 457999999999999999888775 367789999888754
No 119
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.04 E-value=3.4e-10 Score=112.58 Aligned_cols=63 Identities=17% Similarity=0.124 Sum_probs=55.8
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
+.+++.+|||++||+|..+..++... ..+|+++|.|+..+..++++++..|+. +++++..|+.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 142 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL 142 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc
Confidence 77899999999999999999999876 359999999999999999999999985 5888887753
No 120
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.03 E-value=5.3e-10 Score=107.96 Aligned_cols=62 Identities=11% Similarity=0.058 Sum_probs=52.6
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
++++.+|||+|||+|..+..++.. ...+|+++|.|+.+++.++++++..+ .++.++..|+..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~ 119 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWED 119 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHH
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHH
Confidence 678999999999999999988653 23489999999999999999888777 568888888765
No 121
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.03 E-value=6.3e-10 Score=109.31 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=58.9
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.....++.+|||+|||+|..+..++... +.++|+++|.|+..+..++++++..|+.+++++..|+..
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 98 (276)
T 3mgg_A 32 DTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFS 98 (276)
T ss_dssp TCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred cccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccccc
Confidence 3446789999999999999999999874 457999999999999999999999999889999888643
No 122
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.03 E-value=4.4e-10 Score=108.88 Aligned_cols=65 Identities=17% Similarity=0.160 Sum_probs=52.4
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
...+++++|.+|||+|||+|..+.+++... ..+|+++|.|+..+..++++++.. .+++++..|+.
T Consensus 48 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~ 112 (266)
T 3ujc_A 48 LSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDIL 112 (266)
T ss_dssp TTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTT
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccc
Confidence 344567899999999999999999999976 469999999999998877765543 56777777653
No 123
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.03 E-value=7e-10 Score=108.61 Aligned_cols=68 Identities=25% Similarity=0.311 Sum_probs=58.4
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
....+.++++.+|||+|||+|..+..++... ..+|+++|.|+..+..++++++..|+. .+.++..|+.
T Consensus 53 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 121 (273)
T 3bus_A 53 MIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM 121 (273)
T ss_dssp HHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc
Confidence 3455678899999999999999999999865 479999999999999999999998886 4888877753
No 124
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.02 E-value=4e-10 Score=109.81 Aligned_cols=62 Identities=11% Similarity=0.036 Sum_probs=51.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+|.+|||+|||.|.-+.+|++.. ..+|+++|.|+..++.++++++..+. .+.++..|+..
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~ 119 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWED 119 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHH
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHh
Confidence 4689999999999999998887642 25899999999999999998887664 46777777754
No 125
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.01 E-value=7.1e-10 Score=115.82 Aligned_cols=155 Identities=15% Similarity=0.161 Sum_probs=99.4
Q ss_pred ceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcc
Q 009628 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (530)
|.++--..-....+..+++.++.+|||+|||+|+.+.++++.+.....|+|+|+++..+..+ ..+.++..|
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D 89 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILAD 89 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESC
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCC
Confidence 44443333344455566666678999999999999999998875567999999999876433 346677776
Q ss_pred hhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhh
Q 009628 321 ALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRR 400 (530)
Q Consensus 321 a~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 400 (530)
++..
T Consensus 90 ~~~~---------------------------------------------------------------------------- 93 (421)
T 2ih2_A 90 FLLW---------------------------------------------------------------------------- 93 (421)
T ss_dssp GGGC----------------------------------------------------------------------------
T ss_pred hhhc----------------------------------------------------------------------------
Confidence 5431
Q ss_pred ccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccch--hhhhhHHHHH-------HHHHHHHHHHHHHHhc
Q 009628 401 MRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLF--AAEETIQSLR-------NHGKYQRRMFDQAVQL 471 (530)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~--~~~~t~~~l~-------~~~~~Qr~ll~~A~~l 471 (530)
....+||.|+++||+...+...+.. .......... ...+.+..++.++.++
T Consensus 94 --------------------~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 153 (421)
T 2ih2_A 94 --------------------EPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRL 153 (421)
T ss_dssp --------------------CCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHH
T ss_pred --------------------CccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHH
Confidence 1135799999999997765422110 0000000010 0123456899999999
Q ss_pred CCCCCEEEEEecCC--CCCCCHHHHHHHHHh
Q 009628 472 VRPGGIIVYSTCTI--NPGENEALVRYALDR 500 (530)
Q Consensus 472 LkpGG~LVYSTCSi--~~~ENE~vV~~~L~~ 500 (530)
|+|||++++.++.- +....+.+-+++++.
T Consensus 154 Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~ 184 (421)
T 2ih2_A 154 LKPGGVLVFVVPATWLVLEDFALLREFLARE 184 (421)
T ss_dssp EEEEEEEEEEEEGGGGTCGGGHHHHHHHHHH
T ss_pred hCCCCEEEEEEChHHhcCccHHHHHHHHHhc
Confidence 99999999988762 333445555555554
No 126
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.01 E-value=1.2e-09 Score=104.56 Aligned_cols=77 Identities=23% Similarity=0.199 Sum_probs=61.5
Q ss_pred ceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcc
Q 009628 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (530)
|..+.+..-.......+.+.++.+|||+|||+|..+..++... ++|+++|.|+.++..++++++..+ +++++..|
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d 124 (231)
T 1vbf_A 50 GINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILGD 124 (231)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESC
T ss_pred CCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECC
Confidence 4333343333345566788999999999999999999999874 799999999999999999888776 78888887
Q ss_pred hh
Q 009628 321 AL 322 (530)
Q Consensus 321 a~ 322 (530)
+.
T Consensus 125 ~~ 126 (231)
T 1vbf_A 125 GT 126 (231)
T ss_dssp GG
T ss_pred cc
Confidence 64
No 127
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.00 E-value=1.2e-09 Score=107.56 Aligned_cols=61 Identities=16% Similarity=0.175 Sum_probs=53.4
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+++|.+|||+|||+|..+..++.+ + . +|+|+|.|+..+..++++++..|++ ++++..|...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g-~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~ 178 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G-G-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEA 178 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T-C-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C-C-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhh
Confidence 578999999999999999888874 2 2 9999999999999999999999988 8888887654
No 128
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.00 E-value=1.2e-09 Score=112.28 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=57.9
Q ss_pred chHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 249 ~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.+......+++.++.+|||+|||+|..+..++... +..+|+++|.|+..+..++++++..++. ++++..|.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~ 254 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNV 254 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECST
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccc
Confidence 35666667777788899999999999999999864 4569999999999999999999988875 44455553
No 129
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.00 E-value=2.5e-09 Score=107.62 Aligned_cols=67 Identities=15% Similarity=0.152 Sum_probs=57.2
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcch
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDA 321 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da 321 (530)
....+++++|.+|||+|||+|..+..++... ..+|+++|.|+.++..+++++++.|+.. ++++..|+
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 149 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW 149 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG
T ss_pred HHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 3445678899999999999999999999876 3599999999999999999999888854 77777775
No 130
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.99 E-value=4.6e-09 Score=102.34 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=54.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
++.+|||+|||+|..+..+|.... .++|+|+|+|+.++..++++++..|+.+ ++++..|+.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 578999999999999999988653 4799999999999999999999999876 999988864
No 131
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.99 E-value=9.5e-10 Score=104.33 Aligned_cols=67 Identities=12% Similarity=0.128 Sum_probs=54.4
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----ceEEEEcch
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDA 321 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-----~i~~~~~Da 321 (530)
...+...++.+|||+|||+|..+..++... +..+|+++|.|+..+..++++++..++. +++++..|+
T Consensus 22 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 22 VAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS
T ss_pred HHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc
Confidence 344555788999999999999999988743 3469999999999999999998877765 577777664
No 132
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.98 E-value=8.4e-09 Score=101.38 Aligned_cols=75 Identities=19% Similarity=0.119 Sum_probs=61.9
Q ss_pred cchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 248 ~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
++-.+-+.+--+++|++|||+|||+|-.+..+|.. +..++|+|+|+++..+..++++++.+|+.+ |++...|.+.
T Consensus 8 Ls~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 8 LSKRLQKVANYVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp CCHHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HHHHHHHHHHhCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 33334333334578999999999999999999885 445799999999999999999999999976 9999999765
No 133
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.98 E-value=3.4e-10 Score=112.63 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=61.7
Q ss_pred ccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 247 d~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+..+.+...++...++.+|||+|||+|..+..++....+..+|+++|.|+..+..++++++..+. +++++..|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~ 82 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDAT 82 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTT
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchh
Confidence 33444555566778999999999999999999998776557999999999999999999887776 6888887754
No 134
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.98 E-value=1.1e-09 Score=108.15 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=52.7
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
+.++.+|||+|||+|..+..++.. +.++|+++|.|+..+..+++++...++ .++.++..|+.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 124 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY 124 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcc
Confidence 467899999999999999998875 346999999999999999999988877 45788877754
No 135
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.97 E-value=2.2e-09 Score=101.69 Aligned_cols=59 Identities=24% Similarity=0.241 Sum_probs=50.1
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.++.+|||+|||+|..+..++... .+|+++|.|+..+..++++++..+ .+++++..|+.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~ 95 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDAR 95 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTT
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchh
Confidence 458899999999999999888752 289999999999999999988877 56777777753
No 136
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.97 E-value=8.8e-10 Score=110.74 Aligned_cols=67 Identities=19% Similarity=0.102 Sum_probs=57.1
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
..++++.+|||+|||+|..+..+|....+.++|+++|.|+..+..+++++++.|+.+ ++++..|+.+
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 181 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK 181 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc
Confidence 345789999999999999998886434556799999999999999999999998876 8888888654
No 137
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.97 E-value=3.1e-09 Score=105.07 Aligned_cols=66 Identities=20% Similarity=0.124 Sum_probs=55.8
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcch
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDA 321 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da 321 (530)
...+++++|.+|||+|||+|..+.+++...+ .+|+++|.|+..+..+++++++.|+. .++++..|+
T Consensus 57 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 123 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW 123 (287)
T ss_dssp HTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG
T ss_pred HHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh
Confidence 3456678999999999999999999996553 49999999999999999999888874 577777765
No 138
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.97 E-value=1e-09 Score=103.65 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=54.9
Q ss_pred hHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 250 S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
..+....+...++.+|||+|||+|..+..++... .+|+++|.|+..+..++++++..+ +++++..|+.
T Consensus 40 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~ 107 (216)
T 3ofk_A 40 TQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS--HISWAATDIL 107 (216)
T ss_dssp HHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTT
T ss_pred HHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchh
Confidence 3445556777889999999999999999988752 589999999999998888776543 6888887754
No 139
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.97 E-value=8.4e-10 Score=110.99 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=59.9
Q ss_pred hHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 009628 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (530)
Q Consensus 250 S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k 323 (530)
....+..++++++++|||+|||+|..|..++.. .++|+|+|+|+..+..++++++..++ .+++++..|+.+
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 334556678899999999999999999999986 36899999999999999998887776 568888888653
No 140
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.96 E-value=3.6e-09 Score=98.88 Aligned_cols=59 Identities=34% Similarity=0.394 Sum_probs=49.6
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.+++ +|||+|||+|..+..++.. ..+|+++|.|+.++..++++++..+. ++.++..|+.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~ 86 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLA 86 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTT
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChh
Confidence 4567 9999999999999888874 35999999999999999999988877 5777777653
No 141
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=8.4e-09 Score=102.23 Aligned_cols=75 Identities=20% Similarity=0.094 Sum_probs=62.0
Q ss_pred cchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 248 ~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
++..+-+.+--+++|++|||+|||+|-.+..+|.. +..++|+|+|+++..+..++++++.+|+.+ |++...|.+.
T Consensus 8 Ls~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 8 LSKRLEKVASYITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp CCHHHHHHHTTCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred hhHHHHHHHHhCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh
Confidence 33334443444578999999999999999999885 445799999999999999999999999976 9999998765
No 142
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.95 E-value=1.9e-09 Score=101.12 Aligned_cols=61 Identities=20% Similarity=0.307 Sum_probs=54.9
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
++.+|||+|||+|..+..++... +.++|+++|.|+.++..++++++..|+++++++..|+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 125 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVE 125 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTT
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchh
Confidence 48899999999999999999876 45799999999999999999999999988888888764
No 143
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.95 E-value=2.1e-09 Score=100.55 Aligned_cols=59 Identities=19% Similarity=0.090 Sum_probs=46.9
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.+++.+|||+|||+|..+..++.. +. .+|+++|.|+..+..++++++. ...+.++..|+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~ 98 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLG-GF-PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDV 98 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHT-TC-CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCT
T ss_pred cCCCCeEEEECCCCcHHHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcch
Confidence 368899999999999999999875 22 3899999999999988877653 34566666664
No 144
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.95 E-value=1.4e-09 Score=104.09 Aligned_cols=61 Identities=16% Similarity=0.060 Sum_probs=51.5
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+.++.+|||+|||+|..+..++... +..+|+++|.|+..+..++++++..+ +++++..|+.
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~ 102 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYS 102 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTT
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchh
Confidence 6788999999999999999999976 35799999999999998888776554 6777777753
No 145
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.94 E-value=9.6e-10 Score=110.56 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=31.4
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCH
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~ 296 (530)
.+++|.+|||+|||||+.|..+|+. ++|+|+|.++
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~ 113 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT 113 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch
Confidence 3578999999999999999998875 7899999997
No 146
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.94 E-value=1.9e-09 Score=112.48 Aligned_cols=65 Identities=20% Similarity=0.247 Sum_probs=56.6
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-----C-C--CceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-----G-L--KCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~-----g-l--~~i~~~~~Da~k 323 (530)
+.+|.+|||+|||+|..+..++...++.++|+++|.|+..+..+++++++. | + .+++++..|+..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~ 153 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN 153 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH
Confidence 568999999999999999999998877789999999999999999988766 4 3 578888888653
No 147
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.94 E-value=1.6e-09 Score=108.57 Aligned_cols=62 Identities=23% Similarity=0.320 Sum_probs=50.3
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC---------CceEEEEcchhHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL---------KCITTYKLDALKA 324 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl---------~~i~~~~~Da~k~ 324 (530)
.++.+|||+|||.|+.+..++.. +.++|+++|+++..++.+++++ ++ ++ ..++++..|+.+.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~ 146 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEF 146 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHH
Confidence 45689999999999999998875 4579999999999999998887 44 32 4578888887653
No 148
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.94 E-value=6.5e-10 Score=118.49 Aligned_cols=162 Identities=14% Similarity=0.167 Sum_probs=107.9
Q ss_pred ceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCC------------CcEEEEEeCCHHHHHHHHHHHHH
Q 009628 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD------------EGEVVAVDRSHNKVMDIQKLAAE 308 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~------------~G~VvA~D~s~~kv~~i~~~a~~ 308 (530)
|.+|--..-+...+..++|++|.+|||.|||+|+.+..++..+.. ...++|+|+++..+..++.++..
T Consensus 151 G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l 230 (445)
T 2okc_A 151 GQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL 230 (445)
T ss_dssp GGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH
Confidence 444432223445666788999999999999999999999887631 25799999999999999888888
Q ss_pred hCCC--ceEEEEcchhHHHhhcCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccc
Q 009628 309 MGLK--CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVER 386 (530)
Q Consensus 309 ~gl~--~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (530)
.|+. .+.++..|++..
T Consensus 231 ~g~~~~~~~i~~gD~l~~-------------------------------------------------------------- 248 (445)
T 2okc_A 231 HGIGTDRSPIVCEDSLEK-------------------------------------------------------------- 248 (445)
T ss_dssp TTCCSSCCSEEECCTTTS--------------------------------------------------------------
T ss_pred hCCCcCCCCEeeCCCCCC--------------------------------------------------------------
Confidence 7874 455566664320
Q ss_pred cccchhhhhhhhhhccCCCCCCccCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHH
Q 009628 387 TYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFD 466 (530)
Q Consensus 387 ~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~ 466 (530)
. ...+||.|+.+||.++.......+. ..... . .....+..++.
T Consensus 249 ---------------------------------~-~~~~fD~Iv~NPPf~~~~~~~~~~~-~~~~~-~-~~~~~~~~fl~ 291 (445)
T 2okc_A 249 ---------------------------------E-PSTLVDVILANPPFGTRPAGSVDIN-RPDFY-V-ETKNNQLNFLQ 291 (445)
T ss_dssp ---------------------------------C-CSSCEEEEEECCCSSCCCTTCCCCC-CTTSS-S-CCSCHHHHHHH
T ss_pred ---------------------------------c-ccCCcCEEEECCCCCCcccccchhh-HhhcC-C-CCcchHHHHHH
Confidence 0 1137999999999988653211000 00000 0 01123457899
Q ss_pred HHHhcCCCCCEEEEEecC--CCCCCCHHHHH-HHHHhC
Q 009628 467 QAVQLVRPGGIIVYSTCT--INPGENEALVR-YALDRY 501 (530)
Q Consensus 467 ~A~~lLkpGG~LVYSTCS--i~~~ENE~vV~-~~L~~~ 501 (530)
+++++|||||++++.++. +.....+..++ ++++++
T Consensus 292 ~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~ 329 (445)
T 2okc_A 292 HMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDF 329 (445)
T ss_dssp HHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHE
T ss_pred HHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhcC
Confidence 999999999999998865 33333445555 456654
No 149
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.94 E-value=1.5e-09 Score=103.08 Aligned_cols=68 Identities=24% Similarity=0.209 Sum_probs=54.7
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH----HhCCCceEEEEcchh
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA----EMGLKCITTYKLDAL 322 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~----~~gl~~i~~~~~Da~ 322 (530)
...+.+++|.+|||+|||+|..+..+|... +.++|+|+|.|+.++..+.+.++ ..++++++++..|+.
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~ 91 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAE 91 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCST
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchh
Confidence 345567899999999999999999999963 45899999999998887655544 356777888887754
No 150
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.93 E-value=1.6e-09 Score=108.27 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=56.5
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl~~i~~~~~Da~k 323 (530)
.+++.+|||+|||+|..+..++..+....+|+|+|.|+..+..++++++.. +..+++++..|+..
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 368999999999999999999987756789999999999999999999887 34678888888643
No 151
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.92 E-value=3.2e-09 Score=99.76 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=51.0
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+...+....++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++ .+..++.++..|+.
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~ 100 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLF 100 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTT
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccc
Confidence 3333334678889999999999999999986 4699999999998877665 67777888887753
No 152
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.91 E-value=9.5e-10 Score=111.60 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=84.0
Q ss_pred cCCCCCCeEEeecc------CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEE-EEcchhHHHhhcC
Q 009628 257 LDPQKGERILDMCA------APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT-YKLDALKAVRRKN 329 (530)
Q Consensus 257 LdpqpGe~VLDmCA------APGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~-~~~Da~k~v~~~~ 329 (530)
+.+++|++|||+|| |||+ ..++.+++..++|+|+|+|+. +.++++ ++.|+...
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~----- 118 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATV----- 118 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGC-----
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccC-----
Confidence 46889999999999 8898 566777776799999999987 135666 77775431
Q ss_pred CCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCc
Q 009628 330 ESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQ 409 (530)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 409 (530)
T Consensus 119 -------------------------------------------------------------------------------- 118 (290)
T 2xyq_A 119 -------------------------------------------------------------------------------- 118 (290)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcccCCCCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCC
Q 009628 410 CLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGE 489 (530)
Q Consensus 410 ~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~E 489 (530)
.+ +++||+|++|+++...|.+..-. ... ..+.+++|..+.++|||||+++..+- ....
T Consensus 119 ----------~~-~~~fD~Vvsn~~~~~~g~~~~d~--~~~-------~~l~~~~l~~a~r~LkpGG~~v~~~~--~~~~ 176 (290)
T 2xyq_A 119 ----------HT-ANKWDLIISDMYDPRTKHVTKEN--DSK-------EGFFTYLCGFIKQKLALGGSIAVKIT--EHSW 176 (290)
T ss_dssp ----------CC-SSCEEEEEECCCCCC---CCSCC--CCC-------CTHHHHHHHHHHHHEEEEEEEEEEEC--SSSC
T ss_pred ----------Cc-cCcccEEEEcCCccccccccccc--cch-------HHHHHHHHHHHHHhcCCCcEEEEEEe--ccCC
Confidence 11 25799999998877666542100 001 11234899999999999999998753 2333
Q ss_pred CHHHHHHHHHhCCC
Q 009628 490 NEALVRYALDRYKF 503 (530)
Q Consensus 490 NE~vV~~~L~~~~~ 503 (530)
.+ .+.++|+++.+
T Consensus 177 ~~-~l~~~l~~~GF 189 (290)
T 2xyq_A 177 NA-DLYKLMGHFSW 189 (290)
T ss_dssp CH-HHHHHHTTEEE
T ss_pred HH-HHHHHHHHcCC
Confidence 43 55667776543
No 153
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.91 E-value=7e-10 Score=105.39 Aligned_cols=48 Identities=17% Similarity=0.104 Sum_probs=41.5
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~ 307 (530)
+.+.++.+|||++||+|.-+..+|.. ..+|+|+|.|+.+++.++++++
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~ 65 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERG 65 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHC
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHcc
Confidence 45678999999999999999999985 3589999999999998877654
No 154
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.90 E-value=1.7e-09 Score=102.56 Aligned_cols=59 Identities=22% Similarity=0.210 Sum_probs=48.5
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----ceEEEEcch
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDA 321 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-----~i~~~~~Da 321 (530)
+++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..++. .+.++..|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA 92 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc
Confidence 57899999999999999999885 469999999999999998888777763 355555553
No 155
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.90 E-value=6e-09 Score=103.14 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=55.8
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..++..++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..|+ +++++..|+..
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~ 178 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINA 178 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGG
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccc
Confidence 3444458899999999999999999885 35999999999999999999999998 78888888643
No 156
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.89 E-value=2.7e-09 Score=102.96 Aligned_cols=64 Identities=16% Similarity=0.066 Sum_probs=51.7
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
..+...++.+|||+|||+|..+..++... ..+|+++|.|+..+..++++++.. .++.++..|+.
T Consensus 87 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~ 150 (254)
T 1xtp_A 87 ASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASME 150 (254)
T ss_dssp HTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGG
T ss_pred HhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHH
Confidence 34566789999999999999999998864 468999999999999888776544 56777777753
No 157
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.88 E-value=3.7e-09 Score=103.52 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=58.6
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHH------HHHHHHHHHHHhCC-CceEEEEcc
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN------KVMDIQKLAAEMGL-KCITTYKLD 320 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~------kv~~i~~~a~~~gl-~~i~~~~~D 320 (530)
.....+++++|.+|||+|||+|..+..++...++.++|+++|.|+. .+..++++++..++ .+|+++..|
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 3445567889999999999999999999998766689999999997 89999999988887 468777776
No 158
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.88 E-value=3.1e-09 Score=102.83 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=53.9
Q ss_pred eccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 246 Qd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
|..+..-....+.+.++.+|||+|||+|..+..++... +.++|+++|.|+.++..++++ ..++.++..|+
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~ 87 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-----LPNTNFGKADL 87 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-----STTSEEEECCT
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-----CCCcEEEECCh
Confidence 33334444555667889999999999999999999876 357899999999998877665 34567777664
No 159
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=4.1e-09 Score=107.40 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=61.9
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+...|++++|.+|||+|||+|+.|.+++..+. .++|+|+|+|+.++..++++++.+| .++++++.|+..
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~ 86 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGG
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHH
Confidence 45677899999999999999999999999875 6899999999999999999999888 789999999754
No 160
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.87 E-value=4.7e-09 Score=105.24 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=41.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl 311 (530)
++.+|||+|||+|..|..||..++. ..|+|+|+|+..+..++++++..++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~ 95 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLS 95 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC-----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhh
Confidence 6889999999999999999998753 6999999999999999988776654
No 161
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.87 E-value=3.2e-09 Score=100.44 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=45.7
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.+.++++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++++. .+++++..|+
T Consensus 40 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~ 98 (220)
T 3hnr_A 40 DVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDF 98 (220)
T ss_dssp HHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCS
T ss_pred HhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCCh
Confidence 344568999999999999999999885 4699999999999887766543 3455555553
No 162
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.87 E-value=2.7e-09 Score=105.55 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=52.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~k 323 (530)
++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..|+ .+++++..|+..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 128 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQD 128 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGG
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHH
Confidence 3789999999999999999885 46999999999999999999999998 579999888754
No 163
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.86 E-value=2.5e-09 Score=100.22 Aligned_cols=61 Identities=15% Similarity=0.114 Sum_probs=47.5
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
...++.+|||+|||+|..+..++.. ...+|+++|.|+..+..++++++..+. ++.++..|+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~ 80 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNF-KLNISKGDI 80 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCT
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEECch
Confidence 3457899999999999986555443 246999999999999999999887763 466666664
No 164
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.86 E-value=2.2e-09 Score=107.31 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=31.4
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCH
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~ 296 (530)
.+++|.+|||+|||||+.|..+|+. ++|+|+|.++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~ 105 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT 105 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch
Confidence 3578999999999999999988875 7899999997
No 165
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=1.4e-08 Score=93.01 Aligned_cols=127 Identities=13% Similarity=-0.001 Sum_probs=89.5
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCCcc
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~~ 338 (530)
+.++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++++ .++.++..|+...
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~-------------- 101 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVD-------------- 101 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTS--------------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccC--------------
Confidence 458899999999999999999885 469999999999988777654 2356666654320
Q ss_pred CCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCcccCC
Q 009628 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENS 418 (530)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~ 418 (530)
T Consensus 102 -------------------------------------------------------------------------------- 101 (195)
T 3cgg_A 102 -------------------------------------------------------------------------------- 101 (195)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHH
Q 009628 419 KGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYAL 498 (530)
Q Consensus 419 ~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L 498 (530)
.++.++||.|++++++- . ..... ...++|..+.++|||||++++++.+... -..+.+...|
T Consensus 102 -~~~~~~~D~i~~~~~~~---------~-~~~~~-------~~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~~~~l 162 (195)
T 3cgg_A 102 -QISETDFDLIVSAGNVM---------G-FLAED-------GREPALANIHRALGADGRAVIGFGAGRG-WVFGDFLEVA 162 (195)
T ss_dssp -CCCCCCEEEEEECCCCG---------G-GSCHH-------HHHHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHHHHHH
T ss_pred -CCCCCceeEEEECCcHH---------h-hcChH-------HHHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHHHHHH
Confidence 23456899999976541 1 11111 1348899999999999999998765433 4556666667
Q ss_pred HhCCCceee
Q 009628 499 DRYKFLSLA 507 (530)
Q Consensus 499 ~~~~~~~l~ 507 (530)
++.. ++++
T Consensus 163 ~~~G-f~~~ 170 (195)
T 3cgg_A 163 ERVG-LELE 170 (195)
T ss_dssp HHHT-EEEE
T ss_pred HHcC-CEEe
Confidence 6653 4444
No 166
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.86 E-value=3.5e-09 Score=102.66 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=50.5
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
...+...++.+|||+|||+|..+..++..- ..+|+++|.|+..+..+++++. ..++.++..|+.
T Consensus 37 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~ 100 (253)
T 3g5l_A 37 KKMLPDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIE 100 (253)
T ss_dssp HTTCCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGG
T ss_pred HHhhhccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchh
Confidence 345566789999999999999999998852 2389999999999888776654 456778877754
No 167
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.86 E-value=8.9e-09 Score=98.48 Aligned_cols=58 Identities=28% Similarity=0.290 Sum_probs=48.9
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+++.+|||+|||+|..+..++.. .+|+++|.|+.++..++++++..+ .+++++..|+.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~ 89 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMR 89 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChh
Confidence 46789999999999998887764 789999999999999999988877 45777777754
No 168
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.85 E-value=1.8e-08 Score=97.30 Aligned_cols=62 Identities=26% Similarity=0.235 Sum_probs=52.9
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+..+++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..++ ++.++..|+.
T Consensus 37 ~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~ 98 (252)
T 1wzn_A 37 DAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVL 98 (252)
T ss_dssp TCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGG
T ss_pred hcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChh
Confidence 34567889999999999999999874 35899999999999999999988876 4777877764
No 169
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.85 E-value=2.3e-09 Score=103.47 Aligned_cols=61 Identities=20% Similarity=0.113 Sum_probs=50.2
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+++.+|||+|||+|..+..++... ..+|+++|.|+..+..+++++...+..++.++..|+.
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 138 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ 138 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh
Confidence 468999999999999998887643 4699999999999999998887765556777777753
No 170
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.85 E-value=6.4e-09 Score=105.51 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=41.7
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
.+|.+|||+|||+|+-+..++. ...+.|+|+|.|+.+++.+++.+++.+..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~--~~~~~v~GiD~S~~~l~~A~~~~~~~~~~ 97 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFY--GEIALLVATDPDADAIARGNERYNKLNSG 97 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHCC-
T ss_pred CCCCeEEEEecCCcHhHHHHHh--cCCCeEEEEECCHHHHHHHHHHHHhcccc
Confidence 3588999999999987766554 23469999999999999999998887753
No 171
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.85 E-value=6.7e-09 Score=95.86 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=43.0
Q ss_pred HHHHhcCC--CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 252 VTAHALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 252 v~~~~Ldp--qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.....++. .++.+|||+|||+|..+..++... +|+|+|+|+.++.. ..+++++..|+
T Consensus 12 ~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~ 70 (170)
T 3q87_B 12 TLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADL 70 (170)
T ss_dssp HHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECST
T ss_pred HHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECCh
Confidence 33344554 678899999999999998887642 99999999998765 34466666664
No 172
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.85 E-value=4.4e-09 Score=108.58 Aligned_cols=61 Identities=18% Similarity=0.096 Sum_probs=53.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
..+|.+|||+|||+|..+..+|.. +..+|+|+|.| ..+..++++++..|+.+ |++++.|+.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~ 125 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVE 125 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHH
Confidence 457899999999999999999885 45699999999 59999999999999876 888888864
No 173
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.84 E-value=2.9e-09 Score=116.54 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=60.6
Q ss_pred ceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCC-----------------cEEEEEeCCHHHHHHHH
Q 009628 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-----------------GEVVAVDRSHNKVMDIQ 303 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~-----------------G~VvA~D~s~~kv~~i~ 303 (530)
|.+|--..-+.+.+.+++|++|.+|||.|||+|+..+.++..+... ..++|+|+++..+..++
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 4444333334456677899999999999999999999998876432 37999999999999888
Q ss_pred HHHHHhCCCc-----eEEEEcchh
Q 009628 304 KLAAEMGLKC-----ITTYKLDAL 322 (530)
Q Consensus 304 ~~a~~~gl~~-----i~~~~~Da~ 322 (530)
.++...|+.. +.++..|++
T Consensus 229 ~nl~l~gi~~~~~~~~~I~~gDtL 252 (541)
T 2ar0_A 229 MNCLLHDIEGNLDHGGAIRLGNTL 252 (541)
T ss_dssp HHHHTTTCCCBGGGTBSEEESCTT
T ss_pred HHHHHhCCCccccccCCeEeCCCc
Confidence 8887777654 445555543
No 174
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.83 E-value=1e-08 Score=108.67 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=56.0
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH-------HHhCC--CceEEEEcchhH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA-------AEMGL--KCITTYKLDALK 323 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a-------~~~gl--~~i~~~~~Da~k 323 (530)
..+++++|++|||+|||.|..+..+|... +..+|+|+|+|+..+..+++++ +.+|+ ..|+++++|+..
T Consensus 167 ~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~ 243 (438)
T 3uwp_A 167 DEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 243 (438)
T ss_dssp HHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred HhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence 45688999999999999999999998865 3458999999998887776654 45676 579999999765
No 175
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.83 E-value=4.3e-09 Score=105.15 Aligned_cols=63 Identities=25% Similarity=0.224 Sum_probs=52.2
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC---CceEEEEcchh
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL---KCITTYKLDAL 322 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl---~~i~~~~~Da~ 322 (530)
.+.++++ +|||+|||+|..+..++.. ..+|+++|.|+..+..+++++...++ .+|+++..|+.
T Consensus 78 ~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 78 RTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred hhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 3445445 9999999999999998875 36899999999999999999988775 56888888754
No 176
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.83 E-value=6.2e-09 Score=107.17 Aligned_cols=64 Identities=20% Similarity=0.124 Sum_probs=54.3
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
.+...+|.+|||+|||+|..+..+|.. +..+|+|+|.|+ .+..++++++..|+ .+|+++..|+.
T Consensus 59 ~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~ 123 (340)
T 2fyt_A 59 NPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIE 123 (340)
T ss_dssp CGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred hhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHH
Confidence 345678999999999999999988885 346999999996 89999999999998 56888888764
No 177
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.82 E-value=3.6e-09 Score=102.46 Aligned_cols=60 Identities=10% Similarity=0.053 Sum_probs=49.9
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.++++.+|||+|||+|..+..++.. .++|+++|.|+.++..+++++ ..+..++.++..|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~ 95 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADA 95 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCT
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEccc
Confidence 5678999999999999999988874 479999999999999888877 33456677777775
No 178
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.82 E-value=4.7e-09 Score=100.38 Aligned_cols=66 Identities=18% Similarity=0.102 Sum_probs=50.5
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.....+...++.+|||+|||+|..+..++.. +..+|+++|.|+..+..+++++.. .++.++..|+.
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~ 99 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLD 99 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGG
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChh
Confidence 4556677778999999999999999999885 334899999999998877665432 34667766653
No 179
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.81 E-value=2.3e-09 Score=106.14 Aligned_cols=67 Identities=16% Similarity=0.061 Sum_probs=50.9
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC----CceEEEEcchh
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL----KCITTYKLDAL 322 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl----~~i~~~~~Da~ 322 (530)
....+...++.+|||+|||+|..+..++.. ..+|+|+|.|+..+..+++++...+. .++.+...|+.
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 49 LLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp HHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 344455568899999999999999999885 34999999999999999888765443 23555555543
No 180
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.80 E-value=6.9e-09 Score=105.16 Aligned_cols=61 Identities=8% Similarity=0.062 Sum_probs=48.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~ 322 (530)
+..+|||+|||.|+.+..++.. .+..+|+++|+|+..++.+++++..++ -.+++++..|+.
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~ 148 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC
T ss_pred CCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH
Confidence 4579999999999999988874 345799999999999999999887653 234666666653
No 181
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.80 E-value=1.6e-08 Score=95.26 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=40.7
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a 306 (530)
+-...++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++++
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 38 LGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp HTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc
Confidence 334567999999999999999999875 469999999999998887765
No 182
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.80 E-value=5.3e-09 Score=95.08 Aligned_cols=57 Identities=11% Similarity=0.094 Sum_probs=45.4
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcc
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (530)
.++++++.+|||+|||+|..+..++... .+|+++|.++..+..++++ ..+++++..|
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d 68 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP 68 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC
Confidence 3467789999999999999999998864 4999999999998877665 3455555544
No 183
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.79 E-value=1.1e-08 Score=106.79 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=55.5
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
+...+|.+|||+|||+|..+..+|.. +..+|+|+|.| .++..++++++..|+.. |++++.|+..
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 123 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVED 123 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhh
Confidence 45678999999999999999998885 34599999999 99999999999999876 8899888643
No 184
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.78 E-value=7.4e-09 Score=105.94 Aligned_cols=62 Identities=23% Similarity=0.170 Sum_probs=52.0
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
...++.+|||+|||+|..+..+|+. +..+|+|+|.| ..+..++++++..|+.. |+++..|+.
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~ 97 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLE 97 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred hhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchh
Confidence 4457889999999999999888874 34699999999 58999999999999864 888888754
No 185
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.78 E-value=1.9e-08 Score=101.04 Aligned_cols=65 Identities=11% Similarity=0.131 Sum_probs=51.8
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC----CCceEEEEcchhHH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG----LKCITTYKLDALKA 324 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g----l~~i~~~~~Da~k~ 324 (530)
..++.+|||+|||.|+.+..++.. .+..+|+++|+++..++.+++++..++ -..++++..|+.+.
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF 144 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH
Confidence 345689999999999999988864 345799999999999998888776543 35688888887664
No 186
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.78 E-value=1.5e-08 Score=103.04 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=52.3
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~k~ 324 (530)
..+.+|||+|||.|+.+..++.. .+..+|+++|+++..++.+++++..+ ++ ..++++..|+.+.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 161 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF 161 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH
Confidence 45689999999999999988874 34579999999999999999887763 33 4688888888764
No 187
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.78 E-value=8.9e-09 Score=105.47 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=51.5
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~k~ 324 (530)
.++.+|||+|||+|+.+..++... +..+|+++|+|+..++.++++++.+ ++ ..++++..|+.+.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~ 182 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF 182 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH
Confidence 356899999999999999888642 3579999999999999999887653 22 4588888887653
No 188
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=6.1e-09 Score=102.87 Aligned_cols=60 Identities=28% Similarity=0.339 Sum_probs=48.0
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
...+.++++.+|||+|||+|..+..++. ..++|+++|.|+.++..+++++ .++.++..|+
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~ 109 (279)
T 3ccf_A 50 LQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADA 109 (279)
T ss_dssp HHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCT
T ss_pred HHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECCh
Confidence 3566788999999999999999999988 3579999999999988776543 4455565554
No 189
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.77 E-value=1.4e-08 Score=101.51 Aligned_cols=63 Identities=16% Similarity=0.138 Sum_probs=51.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~k~ 324 (530)
.+.+|||+|||.|+.+..++.. .+..+|+++|+++..++.+++++.++ ++ ..++++..|+.+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 141 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH 141 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH
T ss_pred CCCEEEEECCchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH
Confidence 4579999999999999888764 24579999999999999999887654 33 4588888888764
No 190
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.77 E-value=1.3e-08 Score=104.94 Aligned_cols=65 Identities=17% Similarity=0.095 Sum_probs=54.1
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
..+...+|.+|||+|||+|..+..+|.. +.++|+|+|.|+ .+..++++++..|+ ++|+++..|+.
T Consensus 44 ~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~ 109 (348)
T 2y1w_A 44 QNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 109 (348)
T ss_dssp HTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred hccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchh
Confidence 3455678999999999999999988874 446999999996 78888999999998 56888888753
No 191
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.76 E-value=4.6e-08 Score=91.42 Aligned_cols=53 Identities=19% Similarity=0.130 Sum_probs=43.3
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++ ..++.++..|+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~ 94 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTIT 94 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGG
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCccc
Confidence 889999999999999999885 35899999999998877665 345777777654
No 192
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.76 E-value=1.4e-08 Score=96.83 Aligned_cols=58 Identities=19% Similarity=0.111 Sum_probs=49.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++++...++ ++.++..|+.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~ 94 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDIS 94 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccc
Confidence 7889999999999999988875 35899999999999999999888776 5777777653
No 193
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.74 E-value=2e-08 Score=96.73 Aligned_cols=54 Identities=19% Similarity=0.149 Sum_probs=43.8
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.+++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++ +.++..|+..
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~ 92 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIE 92 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHH
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHH
Confidence 467899999999999999999885 35799999999988766544 6667777654
No 194
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.74 E-value=8.6e-09 Score=101.95 Aligned_cols=47 Identities=19% Similarity=0.092 Sum_probs=39.5
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a 306 (530)
+.++++.+|||++||+|.-+..||.. ...|+|+|.|+..++.+++.+
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHT
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhc
Confidence 34568899999999999999999984 248999999999998776544
No 195
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.74 E-value=3.4e-08 Score=92.53 Aligned_cols=58 Identities=14% Similarity=0.117 Sum_probs=48.0
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.+.++.+|||+|||+|..+..++.. +..+|+++|.|+..+..++++++ +++++..|+.
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~ 105 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVS 105 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGG
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHH
Confidence 5668999999999999999999875 34689999999999988887765 5677777653
No 196
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.74 E-value=4.5e-08 Score=93.86 Aligned_cols=58 Identities=22% Similarity=0.142 Sum_probs=46.8
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
+.+|||+|||+|..+..++. ...+|+++|.|+..+..++++++..+. .+++++..|+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 125 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVF 125 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTT
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchh
Confidence 34999999999999987765 457999999999999999988876543 45777777754
No 197
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.73 E-value=2.8e-08 Score=99.94 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=49.7
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-------CCCceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-------GLKCITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~-------gl~~i~~~~~Da~ 322 (530)
.++.+|||+|||+|..+..++.. ...+|+++|.|+..+..+++++... +...+.++..|+.
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~ 100 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSS 100 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEeccc
Confidence 47889999999999999998873 4579999999999999999888776 3446778877764
No 198
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.72 E-value=1.1e-08 Score=98.23 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=46.0
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
++++.+|||+|||+|..+.+++.. ..+|+++|.|+..+..++++ ..+++++..|+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~ 100 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNG 100 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCS
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcch
Confidence 468899999999999999998875 46999999999999877766 34677777775
No 199
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.72 E-value=3.2e-08 Score=98.44 Aligned_cols=70 Identities=17% Similarity=0.118 Sum_probs=60.0
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCH-------HHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH-------NKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~-------~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
+...++.+.+|.+|||+|||+|.-|..+|.. .++|+++|+|+ ..+..++++++..|+.+ |+++..|+..
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH
Confidence 4445557778899999999999999999984 36899999999 99999999998888866 9999999876
Q ss_pred H
Q 009628 324 A 324 (530)
Q Consensus 324 ~ 324 (530)
.
T Consensus 151 ~ 151 (258)
T 2r6z_A 151 Q 151 (258)
T ss_dssp H
T ss_pred H
Confidence 4
No 200
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.72 E-value=7.1e-08 Score=97.77 Aligned_cols=65 Identities=17% Similarity=0.080 Sum_probs=51.9
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh----CCCceEEEEcchhHH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM----GLKCITTYKLDALKA 324 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~----gl~~i~~~~~Da~k~ 324 (530)
..++.+|||+|||.|+.+..++.. .+..+|+++|+|+..++.+++++..+ .-..++++..|+.+.
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 161 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAF 161 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH
Confidence 356789999999999999998864 34579999999999999998877542 234688888888664
No 201
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.72 E-value=2.1e-07 Score=97.60 Aligned_cols=69 Identities=14% Similarity=0.050 Sum_probs=59.1
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCC-------------------------------------CcEEEEEeCCHH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSHN 297 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-------------------------------------~G~VvA~D~s~~ 297 (530)
.+...+++.+|||.|||+|+.++.+|....+ ...|+++|+++.
T Consensus 189 ~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 268 (385)
T 3ldu_A 189 YLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEE 268 (385)
T ss_dssp HTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHH
T ss_pred HhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHH
Confidence 3557789999999999999999988876432 257999999999
Q ss_pred HHHHHHHHHHHhCCC-ceEEEEcchhH
Q 009628 298 KVMDIQKLAAEMGLK-CITTYKLDALK 323 (530)
Q Consensus 298 kv~~i~~~a~~~gl~-~i~~~~~Da~k 323 (530)
.+..++++++..|+. .|++.+.|+.+
T Consensus 269 ai~~Ar~Na~~~gl~~~i~~~~~D~~~ 295 (385)
T 3ldu_A 269 SIDIARENAEIAGVDEYIEFNVGDATQ 295 (385)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEECCGGG
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhh
Confidence 999999999999997 59999988754
No 202
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.72 E-value=4.7e-08 Score=104.30 Aligned_cols=66 Identities=12% Similarity=0.060 Sum_probs=56.6
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHH-------HHHHHHhC--CCceEEEEcch
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI-------QKLAAEMG--LKCITTYKLDA 321 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i-------~~~a~~~g--l~~i~~~~~Da 321 (530)
..+++++|++|||+|||+|..+..+|.+.+ ..+|+|+|+++..+..+ +++++.+| +.+|+++..|.
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 456889999999999999999999999764 46899999999988877 88888899 56788887664
No 203
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.71 E-value=5.3e-08 Score=100.42 Aligned_cols=65 Identities=11% Similarity=0.103 Sum_probs=53.7
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~k~ 324 (530)
...+.+|||+|||.|+.+..++.. .+..+|+++|+|+..++.++++++++ |+ ..++++..|+.+.
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~-~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~ 186 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARH-ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF 186 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH
Confidence 345689999999999999988874 33579999999999999999988765 44 4689999998764
No 204
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=9e-09 Score=100.92 Aligned_cols=60 Identities=25% Similarity=0.170 Sum_probs=45.5
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
....+.+.++.+|||+|||+|..+..++. ...+|+++|.|+..+..++++. +++++..|+
T Consensus 26 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~ 85 (261)
T 3ege_A 26 IINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYA 85 (261)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCT
T ss_pred HHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECch
Confidence 34456678899999999999999999886 3579999999997765443322 566666654
No 205
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.71 E-value=2.5e-08 Score=96.78 Aligned_cols=79 Identities=15% Similarity=0.030 Sum_probs=56.6
Q ss_pred ceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCC-HHHHHHH---HHHHHHhCCCceEE
Q 009628 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS-HNKVMDI---QKLAAEMGLKCITT 316 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s-~~kv~~i---~~~a~~~gl~~i~~ 316 (530)
|.-.++-....+.... .++|++|||+|||+|..+..+|.. ...+.|+|+|.| ...++.+ ++++++.|+.++.+
T Consensus 6 g~~~~~~~~~~~~~~~--~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~ 82 (225)
T 3p2e_A 6 GTKTVDLSKDELTEII--GQFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVF 82 (225)
T ss_dssp TTEEECCCHHHHHHHH--TTCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEE
T ss_pred ccccccCCHHHHHHHh--CCCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 3333433333343333 368999999999999999999874 456799999999 5554444 77777788888888
Q ss_pred EEcchh
Q 009628 317 YKLDAL 322 (530)
Q Consensus 317 ~~~Da~ 322 (530)
...|+.
T Consensus 83 ~~~d~~ 88 (225)
T 3p2e_A 83 VIAAAE 88 (225)
T ss_dssp ECCBTT
T ss_pred EEcCHH
Confidence 887754
No 206
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.71 E-value=5e-08 Score=97.49 Aligned_cols=54 Identities=13% Similarity=0.016 Sum_probs=46.1
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE 308 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~ 308 (530)
.....+.+++|.+|||+|||+|..|..+|.. ..+|+|+|.|+.++..++++++.
T Consensus 36 ~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~ 89 (261)
T 3iv6_A 36 NDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALAD 89 (261)
T ss_dssp HHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSS
T ss_pred HHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHh
Confidence 4455678899999999999999999999884 36899999999999988877654
No 207
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.71 E-value=1.2e-08 Score=97.59 Aligned_cols=57 Identities=19% Similarity=0.103 Sum_probs=45.4
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
..++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++++ ...+++++..|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~ 107 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDL 107 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcch
Confidence 357899999999999999999885 469999999999987776553 234577777765
No 208
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.70 E-value=2.7e-07 Score=97.22 Aligned_cols=69 Identities=16% Similarity=0.082 Sum_probs=59.0
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCC-------------------------------------CcEEEEEeCCHH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSHN 297 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-------------------------------------~G~VvA~D~s~~ 297 (530)
.+.+.+++..|||.+||+|..++.+|....+ ...|+++|+++.
T Consensus 195 ~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 274 (393)
T 3k0b_A 195 LLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR 274 (393)
T ss_dssp HHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH
Confidence 4567789999999999999999888876543 156999999999
Q ss_pred HHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 298 KVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 298 kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
.+..+++|++..|+.. |++.+.|+.+
T Consensus 275 al~~Ar~Na~~~gl~~~I~~~~~D~~~ 301 (393)
T 3k0b_A 275 LIEIAKQNAVEAGLGDLITFRQLQVAD 301 (393)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEECCGGG
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHh
Confidence 9999999999999975 8899888754
No 209
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.70 E-value=1.1e-08 Score=97.56 Aligned_cols=57 Identities=14% Similarity=0.111 Sum_probs=44.8
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
..++.+|||++||+|..+..++.. ..+|+++|.|+..+..+++++.. ++.++..|+.
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~ 96 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKD----GITYIHSRFE 96 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGG
T ss_pred hcCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHH
Confidence 357889999999999999888764 23799999999998877765432 5777777653
No 210
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.69 E-value=4e-08 Score=100.10 Aligned_cols=64 Identities=17% Similarity=0.065 Sum_probs=52.0
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--C---CCceEEEEcchhHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G---LKCITTYKLDALKA 324 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--g---l~~i~~~~~Da~k~ 324 (530)
..+.+|||+|||.|+.+..++... +..+|+++|+++..++.+++++.++ | -..++++..|+.+.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY 144 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH
Confidence 345799999999999999888743 3579999999999999999887762 2 35689999998764
No 211
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.69 E-value=2.5e-07 Score=93.29 Aligned_cols=65 Identities=20% Similarity=0.180 Sum_probs=56.0
Q ss_pred hcCC--CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 256 ALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 256 ~Ldp--qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
.++. .++.+|||+|||+|..+..++... +..+++++|.+ ..+..+++++++.|+.. |++...|+.
T Consensus 158 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 158 LVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAF 225 (335)
T ss_dssp HHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTT
T ss_pred hcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccc
Confidence 4465 788999999999999999999876 45799999999 99999999999999864 888888754
No 212
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.69 E-value=2e-08 Score=97.33 Aligned_cols=50 Identities=20% Similarity=0.235 Sum_probs=40.5
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~ 309 (530)
...+|.+|||++||+|..+..++..- ..+|+++|.|+..+..++++++..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTC
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcC
Confidence 44678999999999999888777531 148999999999999888877543
No 213
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.69 E-value=1.7e-08 Score=100.70 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=44.1
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcC---CCcEE--EEEeCCHHHHHHHHHHHHHh-CCCceEE
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLR---DEGEV--VAVDRSHNKVMDIQKLAAEM-GLKCITT 316 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~---~~G~V--vA~D~s~~kv~~i~~~a~~~-gl~~i~~ 316 (530)
++++.+|||+|||+|..|..++..+. ....| +++|.|+.++..+++.+++. ++.++.+
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~ 113 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKF 113 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceE
Confidence 46788999999999988876554332 34544 99999999999998887754 5666544
No 214
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.68 E-value=1e-08 Score=101.08 Aligned_cols=50 Identities=12% Similarity=0.157 Sum_probs=40.1
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~ 309 (530)
.+.+|.+|||++||+|..+..++.. .-.+|+|+|.|+..++.++++++..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~ 101 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKE 101 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcC
Confidence 4678999999999999877655542 2247999999999999999887653
No 215
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: b.122.1.1 d.17.6.2
Probab=98.68 E-value=9.6e-09 Score=94.58 Aligned_cols=73 Identities=23% Similarity=0.489 Sum_probs=66.8
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
..+.|+||..|++|+++||+|++|||+.++.++++||.|+|+ +.++..
T Consensus 69 ~~~~v~vd~ga~~~l~~Ga~ll~~GV~~~~~~~~~gd~V~V~--------------------------------~~~g~~ 116 (153)
T 1q7h_A 69 SRNIVTVDEGAEPHILNGSDLFAPGIVSMDDSIRKGDMIFVK--------------------------------SSKGYF 116 (153)
T ss_dssp SSSEEEECTTTHHHHTTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------ETTSCE
T ss_pred cCCEEEECHhHHHHHHcCCCcCccccCcccCceeCCCEEEEE--------------------------------ECCCCE
Confidence 568999999999999999999999999999999999999999 336789
Q ss_pred EeecccccCcccccccCCceeeecC
Q 009628 202 IGQGTAMMSRAGIFRASEGIAVDMH 226 (530)
Q Consensus 202 Vg~Gia~mSreelf~~p~GlaV~~~ 226 (530)
+|.|++.+|.+++.+..+|.++++.
T Consensus 117 ia~G~~~~ss~e~~~~~~G~~v~v~ 141 (153)
T 1q7h_A 117 IAVGMAEMDAGEVMATKRGKAARII 141 (153)
T ss_dssp EEEEEESSCHHHHHHHCCSEEEEEE
T ss_pred EEEEEEecCHHHHHhcCCCeEEEEE
Confidence 9999999999999888889888764
No 216
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.66 E-value=2.6e-07 Score=97.13 Aligned_cols=69 Identities=14% Similarity=0.066 Sum_probs=59.0
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCC-------------------------------------CcEEEEEeCCHH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSHN 297 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-------------------------------------~G~VvA~D~s~~ 297 (530)
.+...++++.|||.+||+|+..+.+|....+ ...|+++|+++.
T Consensus 188 ~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~ 267 (384)
T 3ldg_A 188 LLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGR 267 (384)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHH
Confidence 4557789999999999999999888875543 156999999999
Q ss_pred HHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 298 KVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 298 kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
.+..+++|++..|+.. |++.+.|+.+
T Consensus 268 al~~Ar~Na~~~gl~~~I~~~~~D~~~ 294 (384)
T 3ldg_A 268 MVEIARKNAREVGLEDVVKLKQMRLQD 294 (384)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEECCGGG
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHH
Confidence 9999999999999975 9999988754
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.66 E-value=3.6e-08 Score=100.83 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=51.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~k~ 324 (530)
.+.+|||+|||.|+.+..++.. .+.++|+++|+++..++.+++++.++ |+ ..++++..|+.+.
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~ 174 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKH-ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF 174 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTC-TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH
Confidence 4579999999999999988874 34579999999999999998887654 33 4588888887664
No 218
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.65 E-value=1.4e-07 Score=103.40 Aligned_cols=83 Identities=11% Similarity=0.043 Sum_probs=63.4
Q ss_pred ceEEEeccchHHHHHhcC----CCCCCeEEeeccCCChHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHhCC--C
Q 009628 241 GEIFLQNLPSIVTAHALD----PQKGERILDMCAAPGGKTTAIASLLRD--EGEVVAVDRSHNKVMDIQKLAAEMGL--K 312 (530)
Q Consensus 241 G~i~lQd~~S~v~~~~Ld----pqpGe~VLDmCAAPGgKT~~iA~lm~~--~G~VvA~D~s~~kv~~i~~~a~~~gl--~ 312 (530)
|.+|=-..-+.+.+.++. ++++.+|||.|||+|+....++..+.. ...++|+|+++..+..++.++...|+ .
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 276 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIE 276 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcC
Confidence 444332233445555555 778999999999999999999988743 46899999999999999988888888 4
Q ss_pred ceEEEEcchhH
Q 009628 313 CITTYKLDALK 323 (530)
Q Consensus 313 ~i~~~~~Da~k 323 (530)
.+.+...|.+.
T Consensus 277 ~~~I~~gDtL~ 287 (542)
T 3lkd_A 277 NQFLHNADTLD 287 (542)
T ss_dssp GEEEEESCTTT
T ss_pred ccceEecceec
Confidence 57777777543
No 219
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.65 E-value=3.3e-08 Score=106.71 Aligned_cols=64 Identities=17% Similarity=0.090 Sum_probs=53.9
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
.+...++.+|||+|||+|..+..+|.. +..+|+|+|.|+ ++..+++++++.|+ +.|+++..|+.
T Consensus 153 ~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 153 NHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 217 (480)
T ss_dssp TGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred hhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchh
Confidence 344567899999999999999888872 456999999998 88999999999998 56988888864
No 220
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.64 E-value=1.3e-07 Score=94.50 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=44.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeC-CHHHHHHHHHHH-----HHhCCC-----ceEEEEcc
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR-SHNKVMDIQKLA-----AEMGLK-----CITTYKLD 320 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~-s~~kv~~i~~~a-----~~~gl~-----~i~~~~~D 320 (530)
..+|.+|||+|||+|..+..+|.. ..++|+|+|. |+..+..+++++ +..|+. +|++..+|
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~ 147 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYR 147 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECC
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEec
Confidence 457899999999999999888774 3459999999 899999999999 555553 45555443
No 221
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.64 E-value=6.5e-08 Score=109.77 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=55.4
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh------CCCceEEEEcchh
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM------GLKCITTYKLDAL 322 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~------gl~~i~~~~~Da~ 322 (530)
...+.+.++.+|||+|||+|..+..+|....+..+|+|+|+|+.++..++++++.. |+.+|+++..|+.
T Consensus 714 LelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 34455668999999999999999988875434479999999999999998866543 6677888888864
No 222
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.64 E-value=2.8e-07 Score=86.52 Aligned_cols=60 Identities=22% Similarity=0.121 Sum_probs=45.5
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+...++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++ ..+.+...|...
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~ 105 (227)
T 3e8s_A 46 LAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQ 105 (227)
T ss_dssp HHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHH
T ss_pred HHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHh
Confidence 3344567799999999999999888875 45899999999988776654 345566666544
No 223
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.64 E-value=9e-08 Score=98.26 Aligned_cols=136 Identities=12% Similarity=0.097 Sum_probs=96.2
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHHhhcCCCCCCCCccCCCC
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKD 342 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v~~~~~~~~~~~~~~~~~ 342 (530)
.+|||+|||.|+.+..++.... ..+|+++|+++..++..+++.....-..++++..|+.+.+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~---------------- 153 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAE---------------- 153 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHH----------------
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHh----------------
Confidence 3999999999999999998654 45999999999999888877654334568999999876431
Q ss_pred CccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCcccCCCCCC
Q 009628 343 NNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFS 422 (530)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~f~ 422 (530)
.+.
T Consensus 154 -----------------------------------------------------------------------------~~~ 156 (317)
T 3gjy_A 154 -----------------------------------------------------------------------------SFT 156 (317)
T ss_dssp -----------------------------------------------------------------------------TCC
T ss_pred -----------------------------------------------------------------------------hcc
Confidence 123
Q ss_pred CCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCC-CHHHHHHHHHhC
Q 009628 423 PNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGE-NEALVRYALDRY 501 (530)
Q Consensus 423 ~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~E-NE~vV~~~L~~~ 501 (530)
.++||.|++|++.. .+....++ ..+++..+.++|||||+||..+.+....+ ...+++.+-+.|
T Consensus 157 ~~~fDvIi~D~~~~-~~~~~~L~---------------t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF 220 (317)
T 3gjy_A 157 PASRDVIIRDVFAG-AITPQNFT---------------TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVF 220 (317)
T ss_dssp TTCEEEEEECCSTT-SCCCGGGS---------------BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHC
T ss_pred CCCCCEEEECCCCc-cccchhhh---------------HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHC
Confidence 46899999997643 22211111 23788889999999999998876532211 134555556678
Q ss_pred CCceeec
Q 009628 502 KFLSLAP 508 (530)
Q Consensus 502 ~~~~l~~ 508 (530)
+.+.+..
T Consensus 221 ~~v~~~~ 227 (317)
T 3gjy_A 221 EHVAVIA 227 (317)
T ss_dssp SEEEEEE
T ss_pred CceEEEE
Confidence 8766553
No 224
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii}
Probab=98.63 E-value=2.8e-08 Score=93.98 Aligned_cols=73 Identities=29% Similarity=0.465 Sum_probs=66.0
Q ss_pred CeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceEEe
Q 009628 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIG 203 (530)
Q Consensus 124 k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~Vg 203 (530)
..|+||+.|++|+++||+|++|||+.++..+++||.|+|+. +.++..++
T Consensus 95 ~~v~vd~gA~~~l~~GasL~~~GV~~~~g~f~~Gd~V~v~~-------------------------------~~~g~~ia 143 (179)
T 3d79_A 95 RRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVE-------------------------------EKYGRPLA 143 (179)
T ss_dssp TEEEECGGGHHHHHTTCCEEGGGEEEECTTCCTTCEEEEEE-------------------------------TTTCCEEE
T ss_pred CEEEECccHHHHHhCCCCcCCCcEEEccCCccCCCEEEEEE-------------------------------CCCCeEEE
Confidence 79999999999999999999999999999999999999991 22578999
Q ss_pred ecccccCcccccccCCceeeecCC
Q 009628 204 QGTAMMSRAGIFRASEGIAVDMHN 227 (530)
Q Consensus 204 ~Gia~mSreelf~~p~GlaV~~~~ 227 (530)
.|++.++.+++.+..+|.+|++..
T Consensus 144 vG~~~~ss~e~~~~~kG~av~~~H 167 (179)
T 3d79_A 144 IGIALMSGKVMKEKNRGKAVKVIH 167 (179)
T ss_dssp EEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEcCHHHHHhcCCceEEEEEE
Confidence 999999999998888999988643
No 225
>3r90_A Malignant T cell-amplified sequence 1; structural genomics consortium, surface entropy reduction, S binding protein; 1.70A {Homo sapiens}
Probab=98.63 E-value=9.1e-09 Score=98.21 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=65.8
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccC---CccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCC
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSS---HVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERS 198 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~---~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~ 198 (530)
..+.|+||+.|.++|++||+||+|||+..+. .+++||.|+|+. ..+
T Consensus 91 ~lp~v~Vd~~av~~v~~GA~Lm~PGv~~~~~~~~~i~~Gd~V~V~~-------------------------------~~~ 139 (188)
T 3r90_A 91 ILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMA-------------------------------AGA 139 (188)
T ss_dssp GSCEEEECGGGHHHHTTTCCEETHHHHSTTCBCCCCCTTCEEEEEE-------------------------------TTC
T ss_pred cCCEEEEChhHHHHhhcCCccccCeEEccCCCcccccCCCEEEEEE-------------------------------CCC
Confidence 3579999999999999999999999999986 799999999992 225
Q ss_pred ceEEeecccccCcccccccCCceeeecC
Q 009628 199 GLYIGQGTAMMSRAGIFRASEGIAVDMH 226 (530)
Q Consensus 199 gv~Vg~Gia~mSreelf~~p~GlaV~~~ 226 (530)
+..+++|++.||.+++....+|.+|+..
T Consensus 140 ~~~vAVG~a~mss~e~~~~~kG~aV~v~ 167 (188)
T 3r90_A 140 AHALCVGVMKMSAEDIEKVNKGIGIENI 167 (188)
T ss_dssp SSCSEEEEESSCHHHHHHHCCSEEEEEE
T ss_pred CcEEEEEEEEeCHHHHhhcCCcEEEEEE
Confidence 6788999999999999988999999864
No 226
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.63 E-value=2.2e-08 Score=94.21 Aligned_cols=51 Identities=20% Similarity=0.098 Sum_probs=39.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
++.+|||+|||+|..+..+ +..+|+++|.|+..+..+++++ .++.++..|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~ 86 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWG 86 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCT
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEccc
Confidence 7899999999999887665 2238999999999988776654 3455555553
No 227
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=98.60 E-value=3.5e-08 Score=94.19 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=67.9
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
+.+.|+||+.|++|+++||+|++|||+.++..|++||.|.|+ +..+..
T Consensus 74 ~~g~VvVD~GAv~Al~~GaSLl~pGV~~v~g~F~~GD~V~V~--------------------------------~~~G~~ 121 (195)
T 3zv0_C 74 GYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLI--------------------------------TTKGEA 121 (195)
T ss_dssp TSEEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred cCCeEEECHHHHHHHhcCCCccCCCcEecCCCcCCCCEEEEE--------------------------------cCCCCE
Confidence 678999999999999999999999999999999999999999 335679
Q ss_pred EeecccccCcccccccCCceeeecCC
Q 009628 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (530)
Q Consensus 202 Vg~Gia~mSreelf~~p~GlaV~~~~ 227 (530)
|+.|++.+|.+++....+|++|+...
T Consensus 122 IAvG~a~~sS~Ei~~~~kG~aVkv~r 147 (195)
T 3zv0_C 122 IAVAIAQMSTVDLASCDHGVVASVKR 147 (195)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEEcCCHHHHhhcCCcEEEEEEE
Confidence 99999999999999989999988653
No 228
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.60 E-value=9.6e-08 Score=99.62 Aligned_cols=142 Identities=20% Similarity=0.278 Sum_probs=96.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC---CC-----ceEEEEcchhHHHhhcCCCC
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG---LK-----CITTYKLDALKAVRRKNESN 332 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g---l~-----~i~~~~~Da~k~v~~~~~~~ 332 (530)
.+.+|||+|+|.|+.+..++.. ...+|+++|+++..++.+++++..++ ++ +++++..|+++.+...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~--~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~---- 261 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY---- 261 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH----
T ss_pred CCCEEEEEECChhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhh----
Confidence 4689999999999998888764 23799999999999999888865432 22 5888999988754210
Q ss_pred CCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCC
Q 009628 333 DEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLG 412 (530)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 412 (530)
.+
T Consensus 262 --------------------------------------------------------------~~---------------- 263 (364)
T 2qfm_A 262 --------------------------------------------------------------AK---------------- 263 (364)
T ss_dssp --------------------------------------------------------------HH----------------
T ss_pred --------------------------------------------------------------hc----------------
Confidence 00
Q ss_pred CcccCCCCCCCCCCCeEEEcCCCCCCCCccc-chhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCH
Q 009628 413 GRAENSKGFSPNSFDRVLLDAPCSALGLRPR-LFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENE 491 (530)
Q Consensus 413 g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~-l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE 491 (530)
..++||.|++|+|-...|..|. ++. ..+.+.+++.+.++|+|||+|+.-+|+.+..|--
T Consensus 264 ---------~~~~fDvII~D~~d~P~~~~p~~L~t-----------~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~ 323 (364)
T 2qfm_A 264 ---------EGREFDYVINDLTAVPISTSPEEDST-----------WEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEAL 323 (364)
T ss_dssp ---------HTCCEEEEEEECCSSCCCCC----CH-----------HHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHH
T ss_pred ---------cCCCceEEEECCCCcccCcCchhhhH-----------HHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHH
Confidence 1257999999997522232221 111 2344577778899999999999999999874444
Q ss_pred HHHHHHHHh-CCCcee
Q 009628 492 ALVRYALDR-YKFLSL 506 (530)
Q Consensus 492 ~vV~~~L~~-~~~~~l 506 (530)
...+..|++ |+.++.
T Consensus 324 ~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 324 SLYEEQLGRLYCPVEF 339 (364)
T ss_dssp HHHHHHHTTSSSCEEE
T ss_pred HHHHHHHHHhCCceEE
Confidence 444443443 444444
No 229
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.59 E-value=4e-08 Score=95.79 Aligned_cols=55 Identities=16% Similarity=0.130 Sum_probs=43.8
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++++. .++++..|+.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~ 103 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMR 103 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTT
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChH
Confidence 46789999999999999888764 3589999999999887776532 5677777653
No 230
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.59 E-value=4.2e-08 Score=94.12 Aligned_cols=56 Identities=9% Similarity=-0.069 Sum_probs=48.2
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEE
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITT 316 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~ 316 (530)
.+.++|||++||.|..+..++.+-. ..+|+|+|+|+.+++.++++++++|+. ++.+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~ 104 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF 104 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE
Confidence 4577999999999999988876544 459999999999999999999999998 4655
No 231
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.59 E-value=1.5e-07 Score=89.55 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=44.0
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.++.+|||+|||+|..+..++... .+|+++|.|+..+..++++. .++.++..|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~ 92 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDM 92 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCT
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCH
Confidence 578899999999999999999864 38999999999988776652 3466666664
No 232
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.58 E-value=2.3e-08 Score=99.25 Aligned_cols=52 Identities=19% Similarity=0.157 Sum_probs=39.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.+.+|||++||+|..|..++.. ..+|+|+|.|+.+++.+++ ..+|.+...|+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~ 90 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPRVTYAVAPA 90 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTTEEEEECCT
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCCceeehhhh
Confidence 4579999999999999988874 3689999999988754332 24577666664
No 233
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.57 E-value=6.7e-08 Score=94.52 Aligned_cols=56 Identities=23% Similarity=0.180 Sum_probs=44.2
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.++.+|||++||+|..+..++..+ +.++|+++|.|+.++..++++. ..+.+...|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~ 139 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASS 139 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcch
Confidence 678999999999999999999876 3469999999999987765542 3455555553
No 234
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.55 E-value=8.9e-07 Score=90.92 Aligned_cols=68 Identities=24% Similarity=0.179 Sum_probs=57.9
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
....++..++.+|||+|||+|..+..++... +..+++++|+ +..+..++++++..|+. .|+++..|+.
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 242 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFF 242 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 3445677889999999999999999999875 4579999999 99999999999998886 6888888753
No 235
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.55 E-value=7.5e-08 Score=102.05 Aligned_cols=60 Identities=13% Similarity=0.180 Sum_probs=55.0
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh--CCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~--gl~~i~~~~~Da~k 323 (530)
+|.+|||+|||+|..+.++|.. .++|+|+|+|+.++..+++|++.+ |+++|++++.|+.+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~ 154 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKE 154 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGG
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHH
Confidence 5999999999999999988864 469999999999999999999999 99889999999865
No 236
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.53 E-value=7e-08 Score=105.75 Aligned_cols=72 Identities=15% Similarity=0.209 Sum_probs=55.8
Q ss_pred cceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCC--------------CcEEEEEeCCHHHHHHHHHH
Q 009628 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD--------------EGEVVAVDRSHNKVMDIQKL 305 (530)
Q Consensus 240 ~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~--------------~G~VvA~D~s~~kv~~i~~~ 305 (530)
.|.+|--..-+.+.+.+++|++| +|||.|||+|+..+.++..+.. ...++|+|+++..+..++.+
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 45555444456667778899888 9999999999999888765531 35899999999999888888
Q ss_pred HHHhCCC
Q 009628 306 AAEMGLK 312 (530)
Q Consensus 306 a~~~gl~ 312 (530)
+...|+.
T Consensus 303 l~l~gi~ 309 (544)
T 3khk_A 303 MVIRGID 309 (544)
T ss_dssp HHHTTCC
T ss_pred HHHhCCC
Confidence 7776653
No 237
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.53 E-value=3e-07 Score=88.47 Aligned_cols=60 Identities=18% Similarity=0.179 Sum_probs=50.1
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.++++.+|||+|||+|..+..+|.... +|+++|.|+..+..+++++ ...+++++..|+..
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~ 112 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLV 112 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cccCceEEECcccc
Confidence 467899999999999999999998643 7999999999998887765 34468888888754
No 238
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.53 E-value=7.4e-10 Score=108.37 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=56.7
Q ss_pred EEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 243 i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
++.+..-.......+++++|++|||+|||+|..|..++... ++|+|+|+|+..+..++++++ +..+++++..|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 44455555566777888999999999999999999999862 789999999988776665544 2345666666643
No 239
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.52 E-value=1.7e-07 Score=91.52 Aligned_cols=43 Identities=23% Similarity=0.196 Sum_probs=37.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a 306 (530)
++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~ 96 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKG 96 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhc
Confidence 7889999999999999988874 468999999999988776653
No 240
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.51 E-value=7.1e-08 Score=95.78 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=36.1
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE 308 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~ 308 (530)
.+|.+|||+|||+|. +..++... ...+|+|+|.|+.++..+++++++
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~ 116 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACS-HFEDITMTDFLEVNRQELGRWLQE 116 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTT
T ss_pred CCCCeEEEECCCcCh-HHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhh
Confidence 478999999999999 44333322 245999999999999988876653
No 241
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.51 E-value=2.2e-06 Score=88.51 Aligned_cols=61 Identities=23% Similarity=0.209 Sum_probs=51.6
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
..+.+|||++||+|..+..++... +..+++++|. +..+..+++++++.|+. .|++...|+.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 239 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLL 239 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcccc
Confidence 456899999999999999999875 4569999999 89999999998888874 5888888754
No 242
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.49 E-value=1e-07 Score=94.77 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=29.9
Q ss_pred CCCCCeEEeeccCCChHHHHHHHH--cCC-CcEEEEEeC
Q 009628 259 PQKGERILDMCAAPGGKTTAIASL--LRD-EGEVVAVDR 294 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~l--m~~-~G~VvA~D~ 294 (530)
.+||.+|||+||||||++..++++ ++. .|.|+|+|.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~ 109 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG 109 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc
Confidence 578999999999999999999987 433 577777773
No 243
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.49 E-value=4e-06 Score=86.69 Aligned_cols=67 Identities=16% Similarity=0.131 Sum_probs=56.4
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
...++..++.+|||++||+|..+..++... +..+++++|. +..+..+++++.+.|+. .|++...|+.
T Consensus 195 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~ 262 (369)
T 3gwz_A 195 AAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF 262 (369)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC
Confidence 344567788999999999999999999874 4579999999 99999999999988874 5888888753
No 244
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.48 E-value=1.3e-06 Score=88.60 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=53.8
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
++..++.+|||++||+|..+..++.... ..+++++|. +..+...++++++.++ ..|++...|+.
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 229 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF 229 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC
Confidence 3445678999999999999999998764 578999999 9999999999999887 45888887753
No 245
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.47 E-value=2.5e-06 Score=87.55 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=58.4
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
....++..++.+|||+|||+|..+..++... +..+++++|. +..+..+++++++.|+.. |+++..|+.
T Consensus 182 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 250 (359)
T 1x19_A 182 LLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIY 250 (359)
T ss_dssp HHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccc
Confidence 3445677889999999999999999999875 3579999999 999999999999988876 888888864
No 246
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.46 E-value=1.2e-06 Score=89.50 Aligned_cols=67 Identities=21% Similarity=0.209 Sum_probs=57.1
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (530)
...++..++.+|||+|||+|..+..++... +..+++++|+ +..+..++++++..|+. .|+++..|+.
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 243 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFF 243 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 445677889999999999999999999875 4579999999 89999999999998886 6888887753
No 247
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.46 E-value=1.5e-06 Score=87.91 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=52.0
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcch
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDA 321 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da 321 (530)
.++..+ .+|||+|||+|..+..++... +..+++++|. +..+..+++++++.|+. .|+++..|.
T Consensus 163 ~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~ 226 (334)
T 2ip2_A 163 LLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDM 226 (334)
T ss_dssp HSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCT
T ss_pred hCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCC
Confidence 445556 899999999999999999876 3569999999 99999999888877763 477777775
No 248
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.44 E-value=1.1e-06 Score=89.59 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=55.8
Q ss_pred HhcCCCC-CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 255 HALDPQK-GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 255 ~~Ldpqp-Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
..++..+ +.+|||+|||+|..+..++.... ..+++++|. +..+..+++++++.++.. |++...|..+
T Consensus 172 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 240 (352)
T 3mcz_A 172 SELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLD 240 (352)
T ss_dssp HTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTC
T ss_pred HhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCccc
Confidence 3455566 88999999999999999998754 479999999 789999999999988864 8888888643
No 249
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.43 E-value=1.5e-06 Score=97.93 Aligned_cols=69 Identities=19% Similarity=0.091 Sum_probs=58.6
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcC-----------------------------------------CCcEEEEEe
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLR-----------------------------------------DEGEVVAVD 293 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~-----------------------------------------~~G~VvA~D 293 (530)
.+..+++++.|||.|||+|+..+.+|.... ....|+|+|
T Consensus 184 ~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~D 263 (703)
T 3v97_A 184 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSD 263 (703)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred HhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEE
Confidence 345678899999999999999988877542 125799999
Q ss_pred CCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 294 RSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 294 ~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
+++..+...++|++..|+.. |++...|+..
T Consensus 264 id~~av~~A~~N~~~agv~~~i~~~~~D~~~ 294 (703)
T 3v97_A 264 SDARVIQRARTNARLAGIGELITFEVKDVAQ 294 (703)
T ss_dssp SCHHHHHHHHHHHHHTTCGGGEEEEECCGGG
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 99999999999999999986 8999998764
No 250
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.42 E-value=5.3e-07 Score=89.90 Aligned_cols=70 Identities=20% Similarity=0.201 Sum_probs=55.1
Q ss_pred HHHHhcCCCCC--CeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHh-------C-C-CceEEEEcc
Q 009628 252 VTAHALDPQKG--ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-------G-L-KCITTYKLD 320 (530)
Q Consensus 252 v~~~~LdpqpG--e~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~-------g-l-~~i~~~~~D 320 (530)
.+..++.+++| .+|||++||.|.-+..+|.. .++|+++|+++..+..++++.++. + + .+|++++.|
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 45556777788 99999999999999999986 357999999998877777665543 2 3 458888888
Q ss_pred hhHH
Q 009628 321 ALKA 324 (530)
Q Consensus 321 a~k~ 324 (530)
+...
T Consensus 154 ~~~~ 157 (258)
T 2oyr_A 154 SLTA 157 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 251
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.41 E-value=2e-07 Score=87.68 Aligned_cols=42 Identities=14% Similarity=0.219 Sum_probs=36.5
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~ 304 (530)
.++.+|||+|||+|..+..++.. + .+|+++|.|+..+..+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~ 72 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKE 72 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHH
Confidence 68899999999999999998875 3 799999999988776654
No 252
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.39 E-value=5.9e-07 Score=94.21 Aligned_cols=60 Identities=20% Similarity=0.160 Sum_probs=49.5
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (530)
.+|.+|||++||+|-.+..+|+. +..+|+|+|.|+ .+..++++++.+|+.. |++++.|+.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeee
Confidence 36899999999999888766663 345899999996 7888999999999965 888887753
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.36 E-value=9.9e-07 Score=89.55 Aligned_cols=67 Identities=19% Similarity=0.131 Sum_probs=58.1
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+..++++++++|||+|||+|..|..++.. .++|+|+|+++..+..++++++ +..+++++..|+++
T Consensus 41 ~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~ 107 (295)
T 3gru_A 41 KAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALK 107 (295)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTT
T ss_pred HHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhh
Confidence 3455678899999999999999999999986 4799999999999999998887 45679999999765
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.36 E-value=1.1e-06 Score=86.16 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=55.8
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+..+++.+|++|||+|||+|..|..++... ++|+|+|+|+..+..++++++. ..+++++..|+.+
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~ 87 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQ 87 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGG
T ss_pred HHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHh
Confidence 34556678899999999999999999999863 7899999999999988887653 3578888888764
No 255
>2cx0_A Hypothetical protein APE0525; PUA domain, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} SCOP: b.122.1.1 d.17.6.4 PDB: 2cx1_A* 1zs7_A
Probab=98.35 E-value=1.9e-07 Score=88.92 Aligned_cols=73 Identities=26% Similarity=0.374 Sum_probs=63.8
Q ss_pred CCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceEE
Q 009628 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (530)
Q Consensus 123 ~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~V 202 (530)
+..|+||..|.+|+++||++++|||+.+++++++||.|+|.. ..++..+
T Consensus 92 ~g~v~vd~gA~~al~~GasLl~~GV~~~~g~f~~Gd~V~I~~-------------------------------~~~g~~i 140 (187)
T 2cx0_A 92 KGVVLVDKGAAIALAKGAHLMIPGVVGVEGSFTRGDVVAALY-------------------------------HETRTPV 140 (187)
T ss_dssp SEEEEECHHHHHHHHHTCCEEGGGEEEEEECCCTTCEEEEEE-------------------------------TTTTEEE
T ss_pred CcEEEECccHHHHHhCCCCcCCCccEeCCCCcCCCCEEEEEE-------------------------------CCCCeEE
Confidence 349999999999999999999999999999999999999991 2257899
Q ss_pred eecccccCcccc----cccCCceeeecC
Q 009628 203 GQGTAMMSRAGI----FRASEGIAVDMH 226 (530)
Q Consensus 203 g~Gia~mSreel----f~~p~GlaV~~~ 226 (530)
+.|.+.++.+++ .+..+|.+++..
T Consensus 141 A~G~~~~ss~ei~~~~~~~~kG~av~v~ 168 (187)
T 2cx0_A 141 MVGVAEVDSSALEKLYREKARGRAVRRV 168 (187)
T ss_dssp EEEEESSCHHHHHHHHHHTCCSEEEEEE
T ss_pred EEEEEecCHHHHhHHHhccCCceEEEEE
Confidence 999999999999 657788877653
No 256
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.34 E-value=3.6e-07 Score=96.65 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=43.3
Q ss_pred CCCeEEeeccC------CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAA------PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAA------PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
++.+|||+||| +||.++.++....+.++|+++|+|+.+. ....+|+++.+|+..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~d 275 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQND 275 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccc
Confidence 56899999999 7888888887655678999999999862 134578999998754
No 257
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.33 E-value=3.1e-07 Score=93.17 Aligned_cols=39 Identities=26% Similarity=0.254 Sum_probs=34.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~ 301 (530)
+|.+|||++||+|+.|..+++. +.++|+|+|.|+.++..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~ 123 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVW 123 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCH
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHH
Confidence 6789999999999999988884 45799999999988764
No 258
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.30 E-value=3.1e-06 Score=84.41 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=46.7
Q ss_pred CCCCeEEeeccCC---ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 260 QKGERILDMCAAP---GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 260 qpGe~VLDmCAAP---GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.+..+|||++||+ |..+..++. ..+.++|+++|.|+.++...++++.. ...++++..|+..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~-~~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQS-VNPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRD 139 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHH-HCTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHH-hCCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCC
Confidence 3458999999999 976554444 44568999999999999988887743 3468888888754
No 259
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.29 E-value=2.2e-06 Score=93.55 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=61.4
Q ss_pred ccceEEEeccchHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCC------------CcEEEEEeCCHHHHHHHHHHH
Q 009628 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD------------EGEVVAVDRSHNKVMDIQKLA 306 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~------------~G~VvA~D~s~~kv~~i~~~a 306 (530)
..|.||==..-+.+.+.+++|++|++|+|-|||+||..+.++..+.. +..++++|+++.....++-++
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 35666544444566778899999999999999999999888776643 246999999999888777777
Q ss_pred HHhCCCceEEEEcch
Q 009628 307 AEMGLKCITTYKLDA 321 (530)
Q Consensus 307 ~~~gl~~i~~~~~Da 321 (530)
--.|...-.+...|.
T Consensus 275 ~lhg~~~~~I~~~dt 289 (530)
T 3ufb_A 275 LLHGLEYPRIDPENS 289 (530)
T ss_dssp HHHTCSCCEEECSCT
T ss_pred HhcCCcccccccccc
Confidence 666765444444443
No 260
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=98.28 E-value=6.1e-07 Score=99.02 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=67.8
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
..+.|+||++|++||++||+|++|||++++..+++||.|+|+ ..++..
T Consensus 506 ~~g~v~VD~gA~~av~~GasLl~~GV~~~~g~f~~Gd~V~V~--------------------------------~~~g~~ 553 (582)
T 1iq8_A 506 PRMRVVVNKEAEPFARKGKDVFAKFVIFADPGIRPYDEVLVV--------------------------------NENDEL 553 (582)
T ss_dssp TTTEEEECTTTHHHHHTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred CCCEEEECchHHHHHhcCCCcCCCceEecCCCcCCCCEEEEE--------------------------------eCCCCE
Confidence 357999999999999999999999999999999999999999 346789
Q ss_pred EeecccccCcccccccCCceeeecCC
Q 009628 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (530)
Q Consensus 202 Vg~Gia~mSreelf~~p~GlaV~~~~ 227 (530)
+|.|++.+|.+++.+..+|++|++..
T Consensus 554 ia~G~a~~ss~ei~~~~kG~aV~v~~ 579 (582)
T 1iq8_A 554 LATGQALLSGREMIVFQYGRAVKVRK 579 (582)
T ss_dssp EEEEEESSCHHHHHHCCSSEEEEEEE
T ss_pred EEEEEEeeCHHHHHhcCCceEEEEEe
Confidence 99999999999999989999998753
No 261
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.27 E-value=1e-06 Score=87.75 Aligned_cols=43 Identities=7% Similarity=-0.041 Sum_probs=35.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a 306 (530)
.+.+|||+|||.|+-+..++.. + ++|+++|+++..++.++++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~ 114 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFF 114 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTS
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHH
Confidence 4579999999999999888775 4 89999999999887665543
No 262
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.26 E-value=5.6e-07 Score=84.83 Aligned_cols=44 Identities=16% Similarity=0.381 Sum_probs=32.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHHHhCCCceee
Q 009628 462 RRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALDRYKFLSLA 507 (530)
Q Consensus 462 r~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L~~~~~~~l~ 507 (530)
.++|..+.++|||||+++.+++.... .+.+.+..+|++.. ++++
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~~-~~~~~~~~~l~~~G-f~~~ 174 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSRF-EDVRTFLRAVTKLG-FKIV 174 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGGC-SCHHHHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCC-CCHHHHHHHHHHCC-CEEE
Confidence 37888999999999999998866432 36677777777764 4443
No 263
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.24 E-value=2.3e-06 Score=97.07 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=36.7
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcC--CCcEEEEEeCCHHHHHHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLR--DEGEVVAVDRSHNKVMDI 302 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~--~~G~VvA~D~s~~kv~~i 302 (530)
+++.+|||.|||+|+....++..++ +...++|+|+++..+..+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 4689999999999999999998774 235799999999987766
No 264
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.24 E-value=5e-07 Score=85.85 Aligned_cols=46 Identities=15% Similarity=0.092 Sum_probs=36.3
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
+.+|||+|||+|..+..++.. +++|.|+..+..++++ ++.++..|+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~ 93 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTA 93 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBT
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEccc
Confidence 889999999999988776542 9999999998776654 456666654
No 265
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.19 E-value=7.4e-07 Score=90.25 Aligned_cols=36 Identities=19% Similarity=0.125 Sum_probs=30.3
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~ 296 (530)
++|.+|||+||||||+|..+++.++ ...|+++|+..
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~ 115 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGI 115 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecc
Confidence 5899999999999999999987653 35788999874
No 266
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.19 E-value=1.1e-06 Score=85.86 Aligned_cols=43 Identities=23% Similarity=0.260 Sum_probs=35.3
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~ 304 (530)
.+|.+|||+|||+|+.|..+++. ...+|+|+|.|+.++...++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~ 78 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIR 78 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHH
T ss_pred CCCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHH
Confidence 35779999999999999999885 33599999999998765433
No 267
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.18 E-value=5.3e-06 Score=83.57 Aligned_cols=62 Identities=23% Similarity=0.115 Sum_probs=50.9
Q ss_pred CCeEEeeccCC--ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAP--GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAP--GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
-.+|||++||. ++.+..+|+...+..+|+++|.|+.++...++++...+...+.++..|+..
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 37899999997 777888888777788999999999999988877765444468888888754
No 268
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.18 E-value=5.8e-06 Score=84.60 Aligned_cols=42 Identities=21% Similarity=0.128 Sum_probs=35.4
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCC
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s 295 (530)
....++..++.+|||++||+|..+..++.... ..+++++|.+
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~ 217 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRA 217 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECH
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecCH
Confidence 34456778899999999999999999998764 5789999994
No 269
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.17 E-value=1.5e-06 Score=87.32 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=34.5
Q ss_pred CCCeEEeeccCCCh----HHHHHHHHcCC---CcEEEEEeCCHHHHHHHHHH
Q 009628 261 KGERILDMCAAPGG----KTTAIASLLRD---EGEVVAVDRSHNKVMDIQKL 305 (530)
Q Consensus 261 pGe~VLDmCAAPGg----KT~~iA~lm~~---~G~VvA~D~s~~kv~~i~~~ 305 (530)
++.+|||+|||+|- .+..+++.++. ..+|+|+|+|+..++.+++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~ 156 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG 156 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc
Confidence 45799999999998 44445555442 24999999999999877764
No 270
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.17 E-value=1e-05 Score=80.13 Aligned_cols=57 Identities=18% Similarity=0.026 Sum_probs=47.6
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.+..+|||++||.|-.+..++ +...++|+|+++.++..+++++..+| ....+...|.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~ 160 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDV 160 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCT
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeec
Confidence 457799999999998776554 67899999999999999999999888 4456666664
No 271
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.17 E-value=4.9e-07 Score=94.58 Aligned_cols=47 Identities=9% Similarity=0.003 Sum_probs=38.9
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHH
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~ 304 (530)
..+.++++.+|||++||+|..+..++.. ..+|+++|.|+..++.+++
T Consensus 101 ~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~ 147 (416)
T 4e2x_A 101 ATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKARE 147 (416)
T ss_dssp HTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHT
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHH
Confidence 3456788999999999999999998874 3599999999998865543
No 272
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.14 E-value=1e-05 Score=81.24 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=30.1
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~ 296 (530)
.+++.+|||+||||||++..++..+ +.+.|+|+|++.
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGv 108 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGR 108 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEec
Confidence 4688999999999999998887653 346788888873
No 273
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.11 E-value=1.4e-05 Score=76.87 Aligned_cols=60 Identities=20% Similarity=0.158 Sum_probs=50.5
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC---CceEEEEcchhH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL---KCITTYKLDALK 323 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl---~~i~~~~~Da~k 323 (530)
++..+||+.++ |.-|..+|.+ . .|+|+++|.++.....++++.++.|+ ++|+++..|+..
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 35689999997 6777777773 3 69999999999999999999999995 569999998753
No 274
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.10 E-value=7.8e-07 Score=89.47 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=31.6
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~ 297 (530)
.+|+.+|||+||||||++..++..+ +...|+++|++..
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d 125 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQ 125 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccC
Confidence 5789999999999999999887654 3468999999853
No 275
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.04 E-value=8e-06 Score=81.05 Aligned_cols=67 Identities=25% Similarity=0.318 Sum_probs=57.5
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+..+++++|++|||+|||+|..|..|+.. .++|+|+|+++..+..++++++. ..+++++..|+++
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQ 86 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTT
T ss_pred HHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHh
Confidence 3556678899999999999999999998874 37999999999999999888765 4679999999876
No 276
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.02 E-value=8.6e-06 Score=82.17 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=54.6
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
+...|++++|..+||+++|.||.|..|++. .|+|+|+|+++..+...++ ++. ..+++++.|....
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l 78 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHL 78 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGH
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchH
Confidence 456788999999999999999999999986 6899999999999987766 432 5688898887653
No 277
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.02 E-value=1.1e-05 Score=80.95 Aligned_cols=58 Identities=14% Similarity=0.074 Sum_probs=49.7
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
-.+|||++||.|-.+..++.+ .+..+++|+|+++.+++.++++++.+|+. ..+...|.
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~ 190 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADL 190 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCT
T ss_pred CceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeee
Confidence 569999999999998877764 46789999999999999999999999987 56666663
No 278
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.95 E-value=1.6e-05 Score=82.04 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=55.7
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+..+|.++||..++|+|+|-||.|.+|++.++++|+|+|+|+++..+...+ ++.-..+++++.+...
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~----rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK----TIDDPRFSIIHGPFSA 115 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT----TCCCTTEEEEESCGGG
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----hhcCCcEEEEeCCHHH
Confidence 557788999999999999999999999999888999999999999887653 2333557888776544
No 279
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.94 E-value=7.1e-05 Score=77.07 Aligned_cols=66 Identities=15% Similarity=0.050 Sum_probs=50.4
Q ss_pred HhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
..++..++.+|||++||+|..+..|++.. +.-+++.+|. +..+...+++++..+.+.|++...|++
T Consensus 173 ~~~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~ 238 (353)
T 4a6d_A 173 TAFDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFF 238 (353)
T ss_dssp HSSCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTT
T ss_pred HhcCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccc
Confidence 44566778899999999999999999975 4568899998 566777766665555667888888864
No 280
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.90 E-value=3.3e-05 Score=76.72 Aligned_cols=38 Identities=5% Similarity=0.013 Sum_probs=30.9
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHc------CCC-----cEEEEEeCCH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLL------RDE-----GEVVAVDRSH 296 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm------~~~-----G~VvA~D~s~ 296 (530)
.+++.+|||+|.|.|--+..+++.. .++ ..++++|+.+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 4567899999999999998887764 442 5899999887
No 281
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.89 E-value=6.6e-05 Score=77.66 Aligned_cols=55 Identities=13% Similarity=0.122 Sum_probs=40.9
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
..++.+|||++||+|..+..++... +..+++++|. +..+...++ ..+|++...|+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 255 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA------FSGVEHLGGDM 255 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCT
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh------cCCCEEEecCC
Confidence 5678899999999999999999876 4578999999 655433221 24566666664
No 282
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.88 E-value=1.8e-05 Score=79.34 Aligned_cols=76 Identities=20% Similarity=0.160 Sum_probs=59.6
Q ss_pred ceEEEecc-chHHHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEc
Q 009628 241 GEIFLQNL-PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (530)
Q Consensus 241 G~i~lQd~-~S~v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~ 319 (530)
|.-|+.|. ...-.+..+++++| +|||+|||+|..|..++... ++|+|+|+++..+..+++++. -.+++++..
T Consensus 26 GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~---~~~v~vi~~ 98 (271)
T 3fut_A 26 GQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS---GLPVRLVFQ 98 (271)
T ss_dssp SCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT---TSSEEEEES
T ss_pred CccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC---CCCEEEEEC
Confidence 44344442 23345566788999 99999999999999999852 689999999999999888765 257999999
Q ss_pred chhH
Q 009628 320 DALK 323 (530)
Q Consensus 320 Da~k 323 (530)
|+++
T Consensus 99 D~l~ 102 (271)
T 3fut_A 99 DALL 102 (271)
T ss_dssp CGGG
T ss_pred Chhh
Confidence 9876
No 283
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.86 E-value=8.5e-05 Score=76.79 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=42.7
Q ss_pred hcC-CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 256 ALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 256 ~Ld-pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.++ ..++.+|||+|||+|..+..++... +..+++++|. +..+...++ ..+|+++..|++
T Consensus 195 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~ 254 (364)
T 3p9c_A 195 LYHGFEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMF 254 (364)
T ss_dssp HCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTT
T ss_pred hcccccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcC
Confidence 344 6778999999999999999999876 4568999999 555433221 245677666643
No 284
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.84 E-value=3.1e-05 Score=77.77 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=58.2
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
.+..+++++|++|||+|||+|..|..|+..... .++|+|+|+|+..+..+++++ ..+++++..|+++.
T Consensus 34 iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 34 IVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGC
T ss_pred HHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcC
Confidence 455678899999999999999999999987644 367999999999999998873 45799999999874
No 285
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.82 E-value=1.8e-05 Score=77.84 Aligned_cols=57 Identities=21% Similarity=0.143 Sum_probs=40.1
Q ss_pred ccceEEEeccchHHHHHhc------CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHH
Q 009628 239 LEGEIFLQNLPSIVTAHAL------DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (530)
Q Consensus 239 ~~G~i~lQd~~S~v~~~~L------dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~ 297 (530)
..|... .+..|--+..+. .++||.+|||++|||||++...+.+- +..+|+|+|+-..
T Consensus 51 ~~g~~~-g~yrSRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ 113 (267)
T 3p8z_A 51 KRGETT-HHAVSRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGP 113 (267)
T ss_dssp HTTCCS-SCCSSTHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCST
T ss_pred hcCCcC-CCccchHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCC
Confidence 345444 555664443322 35799999999999999998777653 3458999998753
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.76 E-value=7.7e-05 Score=77.97 Aligned_cols=55 Identities=25% Similarity=0.241 Sum_probs=40.7
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+++|++|||+||||||+|..+++. .+.|+|+|+.+-. .. .+....|+.+..|+++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~-----~~--l~~~~~V~~~~~d~~~ 263 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA-----QS--LMDTGQVTWLREDGFK 263 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC-----HH--HHTTTCEEEECSCTTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC-----hh--hccCCCeEEEeCcccc
Confidence 578999999999999999998874 5899999986411 11 1233567777777543
No 287
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.76 E-value=2.8e-06 Score=77.79 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=34.0
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+..++|++|||+++|. +++|.|+.++..+++++.. .++++..|+..
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~ 53 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQ 53 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGG
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhc
Confidence 4578999999999875 2389999998877766432 36777777643
No 288
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.73 E-value=6.7e-05 Score=77.40 Aligned_cols=55 Identities=15% Similarity=0.049 Sum_probs=41.2
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
..++.+|||+|||+|..+..++... +..+++++|. +..+..+++ ..+|+++..|+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 261 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LSGIEHVGGDM 261 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCT
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCc
Confidence 5678999999999999999999875 4578999999 766543322 24466666654
No 289
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.72 E-value=8.9e-05 Score=81.28 Aligned_cols=61 Identities=18% Similarity=0.094 Sum_probs=53.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
.+-+|||+|||.|-.+..||.+ ..+|+++|.|+..+..++..|++.|..+|.....|+...
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~ 126 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV 126 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH
Confidence 4579999999999999999985 468999999999999999999999877798888887653
No 290
>2q07_A Uncharacterized protein AF0587; monomer, structural genomics, PSI-2, protein structure initiative; 2.04A {Archaeoglobus fulgidus dsm 4304} SCOP: b.122.1.1 c.18.1.4 d.17.6.5
Probab=97.70 E-value=1.4e-05 Score=81.52 Aligned_cols=67 Identities=22% Similarity=0.412 Sum_probs=57.2
Q ss_pred CCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceEE
Q 009628 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (530)
Q Consensus 123 ~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~V 202 (530)
.+.|+||+ +|+.| +||+|||+.++.++++||.|+|- .+..+
T Consensus 230 ~~~V~Vd~----~v~~G-~v~~pGv~~~~~~i~~gd~V~V~----------------------------------~g~~v 270 (306)
T 2q07_A 230 IYTVEIGD----FEVKG-TIFAGGVLRADEKIRPNDVVVFH----------------------------------NSRIF 270 (306)
T ss_dssp CSEEEECS----SCCCS-EEEGGGEEEECTTCCTTCEEEEE----------------------------------CSSCE
T ss_pred CCEEEEcc----cccCC-ceeCCeeEeCCCCcCCCCEEEEE----------------------------------CCEEE
Confidence 38999998 78999 99999999999999999999883 13578
Q ss_pred eecccccCcccccccCCceeeecCCc
Q 009628 203 GQGTAMMSRAGIFRASEGIAVDMHNR 228 (530)
Q Consensus 203 g~Gia~mSreelf~~p~GlaV~~~~~ 228 (530)
|+|++.||.++|.+..+|.+|+....
T Consensus 271 avG~a~ms~~em~~~~kG~aV~v~~~ 296 (306)
T 2q07_A 271 GVGLAAMSGKEMAGSEKGIAINVKRK 296 (306)
T ss_dssp EEEEESSCHHHHSCC--CEEEEEEEE
T ss_pred EEEEEeeCHHHHhhcCCceEEEEEEE
Confidence 99999999999999999999987543
No 291
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.67 E-value=4.4e-05 Score=77.27 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=45.3
Q ss_pred CCCCeEEEcCCCCCCCCc--ccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHHHhC
Q 009628 424 NSFDRVLLDAPCSALGLR--PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALDRY 501 (530)
Q Consensus 424 ~sFDrVLlDaPCSglG~r--p~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L~~~ 501 (530)
.+||.||.|.-..-+|.+ ++... .. +=...++-|.+.|+|||.+|. -++.+|-++.+....+.|
T Consensus 168 ~k~DLVISDMAPNtTG~~D~d~~Rs-----~~------L~ElALdfA~~~LkpGGsFvV---KVFQGsg~~~L~~lrk~F 233 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTKENDSK-----EG------FFTYLCGFIKQKLALGGSIAV---KITEHSWNADLYKLMGHF 233 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCSCCCCC-----CT------HHHHHHHHHHHHEEEEEEEEE---EECSSSCCHHHHHHHTTE
T ss_pred CCCCEEEecCCCCcCCccccchhHH-----HH------HHHHHHHHHHHhCcCCCEEEE---EEecCCCHHHHHHHHhhC
Confidence 579999999877777763 11100 01 112567888899999999984 456666555565655555
Q ss_pred CCceeec
Q 009628 502 KFLSLAP 508 (530)
Q Consensus 502 ~~~~l~~ 508 (530)
..+...+
T Consensus 234 ~~VK~fK 240 (344)
T 3r24_A 234 SWWTAFV 240 (344)
T ss_dssp EEEEEEE
T ss_pred CeEEEEC
Confidence 4455544
No 292
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.65 E-value=0.00014 Score=74.34 Aligned_cols=55 Identities=18% Similarity=0.173 Sum_probs=40.7
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
..++.+|||++||+|..+..++... +..+++++|. +..+..+++ ..+|++...|+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 240 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG------SNNLTYVGGDM 240 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------BTTEEEEECCT
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc------CCCcEEEeccc
Confidence 4567899999999999999999875 3469999999 766543322 23466666554
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.62 E-value=0.0002 Score=72.27 Aligned_cols=64 Identities=13% Similarity=0.121 Sum_probs=52.8
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcC----CCcEEEEEeCCH--------------------------HHHHHHHHHHHHh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLR----DEGEVVAVDRSH--------------------------NKVMDIQKLAAEM 309 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~----~~G~VvA~D~s~--------------------------~kv~~i~~~a~~~ 309 (530)
.|| .||+++.+.|+-+.++|..+. ..++|+++|... .++..++++.++.
T Consensus 106 ~pg-~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 106 VPG-DLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp CCC-EEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCC-cEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 344 899999999999999998875 368999999631 1467789999999
Q ss_pred CC--CceEEEEcchhHH
Q 009628 310 GL--KCITTYKLDALKA 324 (530)
Q Consensus 310 gl--~~i~~~~~Da~k~ 324 (530)
|+ +.|+++++|+.+.
T Consensus 185 gl~~~~I~li~Gda~et 201 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDT 201 (282)
T ss_dssp TCCSTTEEEEESCHHHH
T ss_pred CCCcCceEEEEeCHHHH
Confidence 98 6799999998764
No 294
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.48 E-value=9.3e-05 Score=73.18 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=53.4
Q ss_pred HHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 253 ~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
.+..+++++|++|||+|||+|..|. ++. ..+++|+|+|+++..+..++++++.. .+++++..|+.+.
T Consensus 13 iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 13 IVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGC
T ss_pred HHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhC
Confidence 4456688999999999999999999 653 22234999999999998888766532 5799999999873
No 295
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.43 E-value=8.1e-05 Score=73.35 Aligned_cols=67 Identities=15% Similarity=0.251 Sum_probs=55.5
Q ss_pred HHHHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 252 v~~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
-.+..+++++|++|||+|||+|..|..++.. +.++|+|+|+++..+..++++ +..+++++..|+++.
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKF 88 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTC
T ss_pred HHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhC
Confidence 3456678889999999999999999988774 247999999999999888765 345799999998763
No 296
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.37 E-value=0.00058 Score=69.88 Aligned_cols=55 Identities=16% Similarity=0.162 Sum_probs=39.4
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
..++.+|||++||+|..+..++... +..+++++|. +..+..+++ ..+|++...|+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 245 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDM 245 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------CSSEEEEECCT
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------CCCcEEEeCcc
Confidence 3467899999999999999999876 4568999999 555432221 23466665554
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.20 E-value=0.001 Score=67.42 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHH
Q 009628 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (530)
Q Consensus 258 dpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~ 297 (530)
.+++|.+|||++|||||++...|.+ .+..+|+|+|+-..
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~-~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQ-KRVQEVRGYTKGGP 129 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTC-TTEEEEEEECCCST
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhh-cCCCEEEEEEcCCC
Confidence 3578999999999999999877764 33458999999764
No 298
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.09 E-value=0.00019 Score=72.34 Aligned_cols=59 Identities=8% Similarity=-0.040 Sum_probs=48.7
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHHH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~v 325 (530)
+..+||+.||+|..+..+.+ ...+++.+|.++..+..|++|++. ...+++++.|+.+.+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L 150 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKL 150 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHH
T ss_pred CCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHH
Confidence 56799999999988876543 457999999999999999998875 356899999987764
No 299
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=97.08 E-value=0.00071 Score=63.16 Aligned_cols=55 Identities=20% Similarity=0.111 Sum_probs=49.8
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
....|+|+.++...+|.|+||+.|||...+ +..||.|.|+ +.++.+
T Consensus 94 ~k~kV~V~~~ae~~flyG~dV~k~gI~~~~--~~~~~~VvV~--------------------------------~~~~~p 139 (166)
T 2p38_A 94 EKNYVILGPKASFLFTTGKDAPKEAVREIK--WQGSKRVVVL--------------------------------NDLGDI 139 (166)
T ss_dssp CSSEEEECHHHHHHHHTTCCBCGGGEEEEE--CSSCSEEEEE--------------------------------CTTSCE
T ss_pred cccEEEECCcceEeeecCCCcchhcceEEe--ecCCCEEEEE--------------------------------ECCCcE
Confidence 345899999999999999999999999999 9999999999 347889
Q ss_pred EeecccccC
Q 009628 202 IGQGTAMMS 210 (530)
Q Consensus 202 Vg~Gia~mS 210 (530)
+|.|++.+|
T Consensus 140 LG~G~a~~s 148 (166)
T 2p38_A 140 IGIGLINPK 148 (166)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEEEC
Confidence 999999887
No 300
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.07 E-value=0.0012 Score=69.25 Aligned_cols=63 Identities=19% Similarity=0.274 Sum_probs=43.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC---C-----CceEEEEcchhHHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG---L-----KCITTYKLDALKAV 325 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g---l-----~~i~~~~~Da~k~v 325 (530)
+..+||=++.|-|+-...+... +..+|+.+|+++.-++..++....+. + ..++++..|+.+.+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh--~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl 275 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 275 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc--CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHH
Confidence 4579999999999988877653 34799999999988877665432210 1 12566666666544
No 301
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.05 E-value=0.0036 Score=63.46 Aligned_cols=68 Identities=7% Similarity=0.033 Sum_probs=47.8
Q ss_pred HHhcCCCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCceEEEEcchhH
Q 009628 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDALK 323 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~k 323 (530)
+..+.|.| .+||=++.|-|+-+-.++.. .+..+|+.+|+++.-++..++...++. -..++++..|+.+
T Consensus 77 ~l~~~p~p-k~VLIiGgGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~ 149 (294)
T 3o4f_A 77 PLLAHGHA-KHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVN 149 (294)
T ss_dssp HHHHSSCC-CEEEEESCTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTT
T ss_pred HHhhCCCC-CeEEEECCCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHH
Confidence 33445554 58999999999988877663 234589999999999888877655431 1336666666654
No 302
>3u28_A H/ACA ribonucleoprotein complex subunit 4; pseudouridine synthase, pseudouridylation, H/ACA RNA; 1.90A {Saccharomyces cerevisiae} PDB: 3uai_A
Probab=96.98 E-value=0.00067 Score=71.29 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=67.0
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
+.+.|+|+...++++++|+.+++||++..+.+++.||.|.|+ +..+.+
T Consensus 265 ~lp~V~L~deaa~~V~NGq~L~~pgVl~~~~~i~~gd~VvVv--------------------------------t~kGel 312 (400)
T 3u28_A 265 GYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLI--------------------------------TTKGEA 312 (400)
T ss_dssp TSCEEEECHHHHHHHHHHSEEEGGGEEEECTTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred hCCccccCHHHHHHHHCcCccccCccccccccCCCCCEEEEE--------------------------------eCCCcE
Confidence 568899999999999999999999999998889999999998 346889
Q ss_pred EeecccccCcccccccCCceeeecCC
Q 009628 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (530)
Q Consensus 202 Vg~Gia~mSreelf~~p~GlaV~~~~ 227 (530)
++.|++.|+.+++....+|++|+...
T Consensus 313 LAIG~A~mss~em~~~~~G~vvk~~r 338 (400)
T 3u28_A 313 IAVAIAQMSTVDLASCDHGVVASVKR 338 (400)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEEEeCHHHHhhcCCcEEEEEEE
Confidence 99999999999999999999887643
No 303
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.95 E-value=0.00091 Score=75.01 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=45.7
Q ss_pred CCeEEeeccCCChHHHHHHHHc---C---------CCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 009628 262 GERILDMCAAPGGKTTAIASLL---R---------DEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm---~---------~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k~ 324 (530)
+..|||+|||.|-.....+... + .+.+|+|+|.|+..+..++...+ .|+.. |++++.|+...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhc
Confidence 3479999999999975432222 2 23499999999988776666554 78866 99999998653
No 304
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.82 E-value=0.00074 Score=75.17 Aligned_cols=61 Identities=13% Similarity=0.021 Sum_probs=44.8
Q ss_pred CCeEEeeccCCChH---HHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 009628 262 GERILDMCAAPGGK---TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgK---T~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~k 323 (530)
+..|||+|||.|-. +...++..+.+-+|+|+|.|+. ....+++.++.|+.. |++++.|+..
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~ee 422 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMRE 422 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTT
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCccee
Confidence 34799999999987 4444444333337999999985 455667788889866 9999888643
No 305
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=96.31 E-value=0.0034 Score=65.44 Aligned_cols=63 Identities=22% Similarity=0.476 Sum_probs=56.2
Q ss_pred CCCeEEEcchhHHHHH-hccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCce
Q 009628 122 PPKEVIVSRKCAEAVL-RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGL 200 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVL-rGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv 200 (530)
....|+||..|++|+. +|+.+..+||++.+..|+.||.|.|. ++.+.
T Consensus 274 ~~G~v~vD~gA~~al~~~g~sLl~~Gi~~v~g~F~~gd~V~i~--------------------------------~~~g~ 321 (367)
T 2j5v_A 274 PAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRIC--------------------------------NLEGR 321 (367)
T ss_dssp CSCEEEECHHHHHHHHHHCCCBCGGGEEEEESCCCTTCEEEEE--------------------------------ETTCC
T ss_pred CCCEEEECcCHHHHHHhCCCccCCcccEEEECcccCCCEEEEE--------------------------------CCCCC
Confidence 4468999999999998 79999999999999999999999999 34677
Q ss_pred EEeecccccCcccccc
Q 009628 201 YIGQGTAMMSRAGIFR 216 (530)
Q Consensus 201 ~Vg~Gia~mSreelf~ 216 (530)
.++.|.+..+.+++.+
T Consensus 322 ~ia~G~~~y~s~e~~~ 337 (367)
T 2j5v_A 322 DIAHGVSRYNSDALRR 337 (367)
T ss_dssp EEEEEECSSCHHHHHH
T ss_pred EEEEEEecCCHHHHHH
Confidence 8999999999888764
No 306
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.30 E-value=0.022 Score=58.09 Aligned_cols=54 Identities=26% Similarity=0.297 Sum_probs=38.3
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+...+++|++||-.+||+ |..+.++|..++ ..+|+++|++..|++ .++++|.+.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 219 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLS----KAKEIGADL 219 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHH----HHHHTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHH----HHHHhCCCE
Confidence 345789999999998654 444555665543 238999999999875 456678763
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.18 E-value=0.0079 Score=61.79 Aligned_cols=45 Identities=18% Similarity=0.124 Sum_probs=35.6
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~ 307 (530)
.+|||++||.||.+..+...-.+--.|+|+|.++..++..+.|..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 479999999999998887641011279999999999988887753
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.10 E-value=0.015 Score=60.65 Aligned_cols=54 Identities=13% Similarity=0.051 Sum_probs=39.9
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.+|||+|||.||.+..+.+. +--.|+|+|+++..++..+.|. ....++..|..+
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~ 56 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSL 56 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGG
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhh
Confidence 48999999999999888764 2235779999999988887663 234455666543
No 309
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.79 E-value=0.021 Score=57.17 Aligned_cols=60 Identities=17% Similarity=0.118 Sum_probs=45.5
Q ss_pred cchHHHHHhcC--CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhC
Q 009628 248 LPSIVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG 310 (530)
Q Consensus 248 ~~S~v~~~~Ld--pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~g 310 (530)
.|..++..++. -.+|+.|||.+||+|..+..++.+ ...++++|+++..++.+++++++..
T Consensus 220 ~p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 220 FPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 44445444432 268999999999999877665543 3589999999999999999988763
No 310
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.77 E-value=0.021 Score=57.68 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=40.4
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
....+++|++||-.+||+ |..+.++|..++ .+|+++|++..|++ .++++|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~----~~~~lGa~~ 213 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLN----LARRLGAEV 213 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHH----HHHHTTCSE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHH----HHHHcCCCE
Confidence 344789999999998865 666777777664 48999999999976 456678764
No 311
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.71 E-value=0.037 Score=56.24 Aligned_cols=53 Identities=25% Similarity=0.233 Sum_probs=36.9
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+...+++|++||-.+||+ |..+.++|..++ .+|+++|++..|++. ++++|.+.
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~----~~~lGa~~ 215 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEV----AKNCGADV 215 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHH----HHHTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHH----HHHhCCCE
Confidence 345789999999998643 334445555543 369999999998754 45678763
No 312
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.57 E-value=0.031 Score=58.73 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=53.8
Q ss_pred cCCCCCCeEEeeccCCChHHHHHH-HHcCCCcEEEEEeCCHHHHHHHHHHHHH---hCC-CceEEEEcc
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIA-SLLRDEGEVVAVDRSHNKVMDIQKLAAE---MGL-KCITTYKLD 320 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA-~lm~~~G~VvA~D~s~~kv~~i~~~a~~---~gl-~~i~~~~~D 320 (530)
+.+++|+.|+|++|.-|..|..+| .+..+.++|+|+|.++.-...++++++. .++ ++|+++..-
T Consensus 222 ~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~a 290 (409)
T 2py6_A 222 LRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCG 290 (409)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSE
T ss_pred cccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeE
Confidence 346899999999999999999888 5555558999999999999999999998 346 778877653
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.53 E-value=0.024 Score=58.35 Aligned_cols=54 Identities=22% Similarity=0.214 Sum_probs=38.3
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
....+++|++||=.+||+ |..+.++|.+++ ..+|+++|.++.|.+ .++++|.+.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 230 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRR----LAEEVGATA 230 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHH----HHHHHTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHH----HHHHcCCCE
Confidence 445789999999998744 444555555543 238999999999865 456678764
No 314
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.51 E-value=0.021 Score=57.13 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=36.1
Q ss_pred CCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEec
Q 009628 422 SPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483 (530)
Q Consensus 422 ~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTC 483 (530)
+.++||.|+.|||.-...-............+-..+....++++.++.++|||||.|+....
T Consensus 37 ~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 37 PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 45789999999999543210000000001111122222345789999999999999987754
No 315
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.50 E-value=0.15 Score=53.18 Aligned_cols=45 Identities=22% Similarity=0.249 Sum_probs=33.5
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC--CceEEEEcch
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDA 321 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl--~~i~~~~~Da 321 (530)
..+|+|++|++|.-|..++.. -+..+++..+..|. ..++++..|.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~---------------ii~~i~~~~~~~~~~~pe~~v~~nDL 99 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF---------------IVKHISKRFDAAGIDPPEFTAFFSDL 99 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH---------------HHHHHHHHHHHTTCCCCCEEEEEEEC
T ss_pred ceEEEecCCCCChhHHHHHHH---------------HHHHHHHHHhhcCCCCCceeEEecCC
Confidence 589999999999999988775 35556666666554 3477777663
No 316
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.45 E-value=0.035 Score=56.15 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=38.6
Q ss_pred CCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCce
Q 009628 258 DPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314 (530)
Q Consensus 258 dpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i 314 (530)
.+++|++||=.+||+ |..+.++|..++ ..+|+++|.+..|++ .++++|.+.+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~----~~~~lGa~~~ 220 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLA----LAREVGADAA 220 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHH----HHHHTTCSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHH----HHHHcCCCEE
Confidence 678999999998754 445556666653 359999999999975 4566787643
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.41 E-value=0.019 Score=59.60 Aligned_cols=53 Identities=21% Similarity=0.261 Sum_probs=39.7
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
...++++|++||-.+||+ |..+.++|..++ ..+|+++|++..|++. ++++|.+
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~----a~~lGa~ 232 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKL----LSDAGFE 232 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHH----HHTTTCE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHH----HHHcCCc
Confidence 345789999999999765 556667777664 3489999999998754 4567763
No 318
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.35 E-value=0.031 Score=57.08 Aligned_cols=44 Identities=20% Similarity=0.155 Sum_probs=35.9
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~ 307 (530)
+-+|||+|||.||.+..+... +--.|+|+|+++..+...+.|..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHS
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcC
Confidence 568999999999999887663 33468899999999988887753
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.28 E-value=0.077 Score=54.28 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=37.3
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
...+++|++||=.+||+ |..+.++|..++ ..+|+++|++..|++. ++++|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~----a~~lGa~~ 239 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPK----AIELGATE 239 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHH----HHHTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHH----HHHcCCcE
Confidence 35789999999998643 334445555553 2389999999999754 55678753
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.27 E-value=0.11 Score=52.78 Aligned_cols=50 Identities=18% Similarity=0.162 Sum_probs=34.2
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHH
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~ 305 (530)
....+++|++||=.+||+ |..+.++|.+++ ...|+++|.++.|++.++++
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh
Confidence 345789999999987643 344445555542 22499999999998765543
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.24 E-value=0.037 Score=56.62 Aligned_cols=53 Identities=19% Similarity=0.196 Sum_probs=38.2
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..++++|++||-.+||+ |--+.++|..++ ..+|+++|++..|++. ++++|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~----a~~lGa~~ 238 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLEL----AKQLGATH 238 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHH----HHHHTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHH----HHHcCCCE
Confidence 45789999999998755 445556666653 2379999999998754 45677653
No 322
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.17 E-value=0.071 Score=54.60 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=36.8
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..++++|++||=.+||+ |..+.++|..++ ..+|+++|+++.|++ .++++|.+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 243 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFP----KAKALGATD 243 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHH----HHHHTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHH----HHHHhCCcE
Confidence 35789999999998643 333445555542 237999999999975 445678753
No 323
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.16 E-value=0.051 Score=55.82 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=38.2
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+..++++|++||=++||+ |..+.++|..++ ..+|+++|+++.|++ .++++|.+.
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 241 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYE----TAKKFGVNE 241 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHH----HHHTTTCCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHH----HHHHcCCcE
Confidence 345789999999998743 444555565553 237999999999975 456778764
No 324
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.08 E-value=0.086 Score=53.82 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=36.8
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..++++|++||-.+||+ |..+.++|..++ ..+|+++|++..|++. ++++|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~----~~~lGa~~ 238 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFAR----AKEFGATE 238 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHH----HHHHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHH----HHHcCCce
Confidence 35789999999998643 334445555543 2379999999999764 45678753
No 325
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.08 E-value=0.077 Score=54.29 Aligned_cols=53 Identities=15% Similarity=0.094 Sum_probs=36.6
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..++++|++||-.+||+ |..+.++|..++ ..+|+++|+++.|++. ++++|.+.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~----~~~lGa~~ 240 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEK----AKVFGATD 240 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHH----HHHTTCCE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHH----HHHhCCce
Confidence 35789999999998643 334445555542 2379999999999764 45678753
No 326
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.05 E-value=0.1 Score=53.43 Aligned_cols=53 Identities=15% Similarity=0.136 Sum_probs=36.9
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..++++|++||-.+||+ |..+.++|..++ ..+|+++|+++.|++. ++++|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~----~~~lGa~~ 239 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAK----AKEVGATE 239 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHH----HHHTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHH----HHHhCCce
Confidence 35789999999998643 334445555543 2379999999999754 45678753
No 327
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.99 E-value=0.041 Score=55.85 Aligned_cols=54 Identities=22% Similarity=0.240 Sum_probs=37.2
Q ss_pred HhcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+...+++|++||=.+||+ |..+.++|.+++ ..+|+++|.+++|++ .++++|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~----~~~~lGa~~ 214 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCD----IALEYGATD 214 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHH----HHHHHTCCE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHH----HHHHhCCce
Confidence 456789999999997643 334445555432 237999999999875 456678753
No 328
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.98 E-value=0.044 Score=56.62 Aligned_cols=52 Identities=23% Similarity=0.273 Sum_probs=37.8
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
...+++|++||-.+||+ |..+.++|..++ ...|+++|.+..|++. ++++|.+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~----a~~lGa~ 232 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAH----AKAQGFE 232 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHH----HHHTTCE
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHH----HHHcCCc
Confidence 45789999999988654 445556666653 2379999999999754 4567874
No 329
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.88 E-value=0.11 Score=52.24 Aligned_cols=55 Identities=24% Similarity=0.218 Sum_probs=39.0
Q ss_pred HHhcCCCCCCeEEeeccCCCh-HHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 254 AHALDPQKGERILDMCAAPGG-KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 254 ~~~LdpqpGe~VLDmCAAPGg-KT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
.+...+++|++||=.+||+.| .+.++|.+++ ...|+++|.+++|++ +++++|.+.
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~----~a~~lGa~~ 208 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLA----LAKSFGAMQ 208 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHH----HHHHTTCSE
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHH----HHHHcCCeE
Confidence 345578999999999876544 3445555543 347899999999964 567788764
No 330
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.82 E-value=0.099 Score=52.62 Aligned_cols=53 Identities=23% Similarity=0.237 Sum_probs=38.6
Q ss_pred hcCCCCCCeEEeeccCCCh-HHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAPGG-KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGg-KT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
...+++|++||=.+||++| .+.++|..+. ..+|+++|.+++|+. +++++|.+.
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~----~~~~~Ga~~ 211 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLN----LAKKIGADV 211 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHH----HHHHTTCSE
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhh----hhhhcCCeE
Confidence 3468999999999988754 3444444443 469999999999964 566778764
No 331
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=94.80 E-value=0.034 Score=52.68 Aligned_cols=70 Identities=19% Similarity=0.205 Sum_probs=61.3
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
....|+|...+...++-|=|||.-+|..+++++..||.|.|+ +.++++
T Consensus 93 ~~~kV~Vk~~~E~~flyG~nVfk~~V~~i~e~i~~~~~VvV~--------------------------------n~~d~p 140 (188)
T 1sqw_A 93 AKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVY--------------------------------SMADIP 140 (188)
T ss_dssp CSCEEEECHHHHHHHTTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------ETTCCE
T ss_pred cCcEEEECCCceeeEEeccchhHHhhhhcCCCCCCCCEEEEE--------------------------------eCCCCE
Confidence 447899999999999999999999999999999999999999 557799
Q ss_pred EeecccccCcccccc-cCCceee
Q 009628 202 IGQGTAMMSRAGIFR-ASEGIAV 223 (530)
Q Consensus 202 Vg~Gia~mSreelf~-~p~GlaV 223 (530)
+|.|++..|..++.. .|.++.+
T Consensus 141 LG~G~a~~s~~e~~~~~~~~~vv 163 (188)
T 1sqw_A 141 LGFGVAAKSTQDCRKVDPMAIVV 163 (188)
T ss_dssp EEEEEESSCHHHHHHSCTTSEEE
T ss_pred EEEEEeecCHHHHHhcCCCcEEE
Confidence 999999999888876 3555544
No 332
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.61 E-value=0.077 Score=54.60 Aligned_cols=52 Identities=19% Similarity=0.175 Sum_probs=35.8
Q ss_pred hcC-CCCCCeEEeeccCCChHHHHHHHHcCCC--cEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALD-PQKGERILDMCAAPGGKTTAIASLLRDE--GEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~Ld-pqpGe~VLDmCAAPGgKT~~iA~lm~~~--G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
.+. +++|++||-.+| |+-...++++.+.. .+|+++|++..|++. ++++|.+.
T Consensus 189 ~~~~~~~g~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----~~~lGa~~ 243 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGA--GPLGLFGVVIARSLGAENVIVIAGSPNRLKL----AEEIGADL 243 (380)
T ss_dssp TCSSCCBTCEEEEECC--SHHHHHHHHHHHHTTBSEEEEEESCHHHHHH----HHHTTCSE
T ss_pred hcCCCCCCCEEEEECc--CHHHHHHHHHHHHcCCceEEEEcCCHHHHHH----HHHcCCcE
Confidence 346 889999999995 55444444433322 389999999998754 45678754
No 333
>2aus_C Pseudouridine synthase; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_A 3lwo_A* 3lwq_A* 3lwp_A 3lwv_A 3hax_A* 2hvy_A* 3hay_A* 2ey4_A 2rfk_A 3mqk_A 3hjw_A* 3hjy_A
Probab=94.54 E-value=0.04 Score=56.68 Aligned_cols=72 Identities=32% Similarity=0.516 Sum_probs=60.8
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
+.+.|.|+...+.++++|+.+++||+...+.+++.||.|.|+ ...+.+
T Consensus 249 ~~p~V~L~de~a~~V~nGq~L~~~gv~~~~~~i~~gd~V~V~--------------------------------~~~G~f 296 (334)
T 2aus_C 249 HLPKIWIKDSAVAAVAHGANLTVPGIVKLNAGIKKGDLVAIM--------------------------------TLKDEL 296 (334)
T ss_dssp TSCEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------ETTCCE
T ss_pred cccEEEECHHHHHHHHCCCccccCcccccccccCCCCEEEEE--------------------------------ecCCeE
Confidence 568899999999999999999999988777778889999888 235679
Q ss_pred EeecccccCcccccccCCceeeec
Q 009628 202 IGQGTAMMSRAGIFRASEGIAVDM 225 (530)
Q Consensus 202 Vg~Gia~mSreelf~~p~GlaV~~ 225 (530)
+|.|.+.++.+++....+|..++.
T Consensus 297 LAIGe~~~s~~e~~~~~~G~~vKp 320 (334)
T 2aus_C 297 VALGKAMMSTQEMIERSKGIAVDV 320 (334)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEE
T ss_pred EEEEEeccCchhccccCCCeEEEE
Confidence 999999999888888778865543
No 334
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.52 E-value=0.053 Score=56.16 Aligned_cols=60 Identities=8% Similarity=0.029 Sum_probs=49.6
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
+++.|||++.|+|..|..|+...+ ..+|+|+|+++.-+..++++. ...+++++..|+++.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~---~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF---EGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT---TTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc---cCCCEEEEECCccch
Confidence 469999999999999999998543 257999999999888777765 246799999999764
No 335
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.50 E-value=0.061 Score=49.62 Aligned_cols=51 Identities=24% Similarity=0.290 Sum_probs=34.8
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
.++++|++||..+|+ ||....+++++.. ..+|+++|++..+.+.+ +++|.+
T Consensus 34 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~ 85 (198)
T 1pqw_A 34 GRLSPGERVLIHSAT-GGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVE 85 (198)
T ss_dssp SCCCTTCEEEETTTT-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCS
T ss_pred hCCCCCCEEEEeeCC-ChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC
Confidence 468899999998754 5555555554432 24899999999887544 345653
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.42 E-value=0.081 Score=54.14 Aligned_cols=53 Identities=21% Similarity=0.151 Sum_probs=35.4
Q ss_pred hcCCC-----CCCeEEeeccC-C-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQ-----KGERILDMCAA-P-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~Ldpq-----pGe~VLDmCAA-P-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..+++ +|++||=.+|+ + |..+.++|..+. ..+|+++|.+..|++. ++++|.+.
T Consensus 161 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~----~~~lGad~ 220 (363)
T 4dvj_A 161 RLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEW----VKSLGAHH 220 (363)
T ss_dssp TSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHH----HHHTTCSE
T ss_pred hhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHH----HHHcCCCE
Confidence 34566 89999977632 2 444455555443 3599999999998754 45678764
No 337
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.42 E-value=0.16 Score=51.17 Aligned_cols=58 Identities=12% Similarity=0.050 Sum_probs=40.4
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCCcE-EEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDEGE-VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~G~-VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+.+-+|||+|||.||.+..+... +-+-. |+|+|+++..+...+.|. .....+..|..+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~ 72 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRS 72 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGG
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHH
Confidence 45678999999999999877663 21222 699999999888776653 223445566543
No 338
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.23 E-value=0.057 Score=52.84 Aligned_cols=61 Identities=11% Similarity=0.196 Sum_probs=42.9
Q ss_pred cchHHHHHhcC--CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q 009628 248 LPSIVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (530)
Q Consensus 248 ~~S~v~~~~Ld--pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl 311 (530)
.|-.++..++. -.+|+.|||.+||+|.-+...+. + .-.++++|+++..+..++++++..++
T Consensus 197 ~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~-~--gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 197 KPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKK-L--GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHH-T--TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHH-c--CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 44445444332 36899999999999975544433 3 35899999999999999988876654
No 339
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.14 E-value=0.053 Score=54.96 Aligned_cols=53 Identities=23% Similarity=0.194 Sum_probs=38.4
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCce
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i 314 (530)
...+++|++||-.+||+ |..+.++|.+++ .+|+++|+++.|++ .++++|.+.+
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~----~~~~lGa~~v 224 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQ----DALSMGVKHF 224 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHH----HHHHTTCSEE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHH----HHHhcCCCee
Confidence 34789999999998754 444556666553 48999999999976 4456787643
No 340
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.12 E-value=0.15 Score=52.06 Aligned_cols=44 Identities=9% Similarity=0.029 Sum_probs=33.7
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcE-E-EEEeCCHHHHHHHHHHH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGE-V-VAVDRSHNKVMDIQKLA 306 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~-V-vA~D~s~~kv~~i~~~a 306 (530)
.-+|+|+|||.||.+..+... +=..+ | .|+|+++..++..+.|.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHC
Confidence 358999999999999887653 21124 5 69999999988877764
No 341
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.08 E-value=0.06 Score=55.00 Aligned_cols=52 Identities=19% Similarity=0.156 Sum_probs=37.8
Q ss_pred hcCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
...+++|++||=.+||+ |.-+.++|..++ .+|+++|++..|++. ++++|.+.
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~----~~~lGa~~ 236 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDR----AFALGADH 236 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHH----HHHHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHH----HHHcCCCE
Confidence 34689999999998654 444556666553 489999999998764 56678764
No 342
>2apo_A Probable tRNA pseudouridine synthase B; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: b.122.1.1 d.265.1.2
Probab=94.02 E-value=0.059 Score=55.92 Aligned_cols=71 Identities=35% Similarity=0.558 Sum_probs=59.5
Q ss_pred CCCeEEEcchhHHHHHhccccccCceeeccCCccCCCEEEEEEcccCCcCCCCCcccccccccccCCCCCCCcccCCceE
Q 009628 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (530)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGil~~~~~i~~Gd~VaV~~~~~~~~~~~~w~~~~~rg~~~~~~~~~~~~~~~~gv~ 201 (530)
..+.|+|+..++.++++|+.+++||+...+..+..|+.|.|+ ...+.+
T Consensus 268 ~lP~v~l~~~~~~~i~nG~~L~~pgi~~~~~~i~~gd~V~v~--------------------------------~~~G~f 315 (357)
T 2apo_A 268 HLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVE--------------------------------TLKGEA 315 (357)
T ss_dssp TSEEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------CTTSCE
T ss_pred cCcEEEECHHHHHHHhCcCccCCCcccccccccCCCCeEEEE--------------------------------cCCCEE
Confidence 568899999999999999999999987777778889988888 335679
Q ss_pred EeecccccCcccccccCCceeee
Q 009628 202 IGQGTAMMSRAGIFRASEGIAVD 224 (530)
Q Consensus 202 Vg~Gia~mSreelf~~p~GlaV~ 224 (530)
+|.|.+.|+.+++....+|..++
T Consensus 316 lAIGea~~~~~ei~~~~kG~vvK 338 (357)
T 2apo_A 316 VAVGKALMNTKEILNADKGVAVD 338 (357)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEE
T ss_pred EEEEEeccccccccccCCCeEEE
Confidence 99999999888888777775444
No 343
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.32 E-value=0.12 Score=52.37 Aligned_cols=46 Identities=22% Similarity=0.292 Sum_probs=31.0
Q ss_pred CCCeEEeeccCCChHH---HHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 261 KGERILDMCAAPGGKT---TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT---~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+|++||=.+ |.|+-. .++|..++ .+|+++|++..|++.+ +++|.+.
T Consensus 150 ~g~~VlV~g-g~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~ 198 (346)
T 3fbg_A 150 EGKTLLIIN-GAGGVGSIATQIAKAYG--LRVITTASRNETIEWT----KKMGADI 198 (346)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHH----HHHTCSE
T ss_pred CCCEEEEEc-CCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHH----HhcCCcE
Confidence 899999763 334444 44555443 4999999999987654 4577654
No 344
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.29 E-value=0.2 Score=51.34 Aligned_cols=43 Identities=23% Similarity=0.197 Sum_probs=33.3
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHH
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLA 306 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a 306 (530)
-+++|+|||.||.+..+... +-.. .|.|+|+++..++..+.|.
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~ 47 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNF 47 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhC
Confidence 37999999999999887664 2122 4779999999988777664
No 345
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.21 E-value=0.14 Score=52.63 Aligned_cols=51 Identities=18% Similarity=0.171 Sum_probs=37.0
Q ss_pred cCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+.+++|++||-.+||+ |..+.++|..++ .+|+++|++..|++.+ +++|.+.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a----~~lGa~~ 241 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAA----KALGADE 241 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHH----HHHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH----HHcCCcE
Confidence 4789999999998754 444556666553 3799999999997644 4578653
No 346
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.81 E-value=0.78 Score=44.39 Aligned_cols=63 Identities=16% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCCeEEeeccCCC-hHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPG-GKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPG-gKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.++|=-+|+.+ |...++|..+... ..|+.+|++...++.+.+.+++.+-..+.++..|..+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 69 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS 69 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC
Confidence 4778888887754 6777777766434 4899999999999999888888876667788888654
No 347
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.79 E-value=0.39 Score=49.68 Aligned_cols=51 Identities=22% Similarity=0.300 Sum_probs=35.3
Q ss_pred CCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 258 DPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 258 dpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
.+++|++||=.+||+ |..+.++|.+++ ..+|+++|.++.|++ .++++|.+.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~~~~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRN----LAKELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHH----HHHHHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHH----HHHHcCCCE
Confidence 588999999987643 333444555442 238999999999975 456678653
No 348
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.62 E-value=0.29 Score=48.95 Aligned_cols=51 Identities=22% Similarity=0.340 Sum_probs=35.9
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
.++++|++||-.+|+ |+....++++++. ..+|+++|++..+++.+ +++|.+
T Consensus 141 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1v3u_A 141 CGVKGGETVLVSAAA-GAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQIGFD 192 (333)
T ss_dssp SCCCSSCEEEEESTT-BHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCCCEEEEecCC-CcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HhcCCc
Confidence 468999999998873 5555555555432 24899999999887544 456654
No 349
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.49 E-value=0.29 Score=49.39 Aligned_cols=51 Identities=18% Similarity=0.071 Sum_probs=36.1
Q ss_pred CCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 258 DPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 258 dpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
++ +|++||-.+||+ |..+.++|..+.+..+|+++|++..|++. ++++|.+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~----~~~lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDF----ALELGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH----HHHHTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH----HHHhCCCE
Confidence 77 999999999854 44455666665112479999999998754 45578653
No 350
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.42 E-value=0.17 Score=50.58 Aligned_cols=49 Identities=27% Similarity=0.287 Sum_probs=33.9
Q ss_pred cCCCCCCeEEeeccCCChHHH---HHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCAAPGGKTT---AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~---~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
.++++|++||=.+|+ |+-.. ++|..++ .+|+++|+++.|++.+ +++|.+
T Consensus 136 ~~~~~g~~VlV~Ga~-g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~~Ga~ 187 (325)
T 3jyn_A 136 YQVKPGEIILFHAAA-GGVGSLACQWAKALG--AKLIGTVSSPEKAAHA----KALGAW 187 (325)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHHHHT--CEEEEEESSHHHHHHH----HHHTCS
T ss_pred cCCCCCCEEEEEcCC-cHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH----HHcCCC
Confidence 478999999977642 44444 4444443 4899999999997654 456765
No 351
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=92.32 E-value=0.32 Score=50.93 Aligned_cols=26 Identities=4% Similarity=0.018 Sum_probs=21.4
Q ss_pred HHHHHHHHhcCCCCCEEEEEecCCCC
Q 009628 462 RRMFDQAVQLVRPGGIIVYSTCTINP 487 (530)
Q Consensus 462 r~ll~~A~~lLkpGG~LVYSTCSi~~ 487 (530)
..+|..-.+-|+|||++|.++..-..
T Consensus 205 ~~FL~~Ra~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 205 TTFLRIHSEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHhccCCeEEEEEecCCC
Confidence 46788888999999999999876543
No 352
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.29 E-value=0.065 Score=52.45 Aligned_cols=57 Identities=12% Similarity=0.162 Sum_probs=37.2
Q ss_pred CCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCC
Q 009628 423 PNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTI 485 (530)
Q Consensus 423 ~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi 485 (530)
.++||.|++|||... |.. .+. ... +...+..+-..+|..+.++|+|||.|+...|..
T Consensus 21 ~~~vdlI~~DPPY~~-~~~--~~d-~~~--~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~ 77 (260)
T 1g60_A 21 NKSVQLAVIDPPYNL-SKA--DWD-SFD--SHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPF 77 (260)
T ss_dssp TTCEEEEEECCCCSS-CSS--GGG-CCS--SHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHH
T ss_pred ccccCEEEECCCCCC-Ccc--ccc-ccC--CHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcH
Confidence 468999999999842 211 011 110 122333445588889999999999998887653
No 353
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.21 E-value=0.21 Score=50.17 Aligned_cols=51 Identities=29% Similarity=0.410 Sum_probs=34.1
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
..+++|++||=.+|+ |+-...++++.+. ..+|+++|++..|++. ++++|.+
T Consensus 144 ~~~~~g~~vlV~Ga~-g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~ga~ 195 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAA-GGVGLILNQLLKMKGAHTIAVASTDEKLKI----AKEYGAE 195 (334)
T ss_dssp SCCCTTCEEEESSTT-BHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCS
T ss_pred ccCCCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHcCCc
Confidence 478999999988753 4444444333321 2489999999998764 4557765
No 354
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.16 E-value=0.96 Score=43.38 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=44.6
Q ss_pred CCCeEEeeccCCC-hHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPG-GKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPG-gKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+|+.| |...++|..+.. ..+|+.++++......+.+..++.+-..+.++..|..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 69 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT 69 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC
Confidence 3667777777643 577777766633 3489999999877777777777776556788888864
No 355
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=92.13 E-value=0.76 Score=43.61 Aligned_cols=61 Identities=20% Similarity=0.090 Sum_probs=43.9
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRD--EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~--~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+|| +.-|.||...++|..+.. ...|+.++++..+...+.+.++..+ ..+.++..|...
T Consensus 3 ~~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~ 65 (276)
T 1wma_A 3 GIHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDD 65 (276)
T ss_dssp CCCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTC
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCC
Confidence 355666 455679999999877643 4599999999988887776666555 346777788643
No 356
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.79 E-value=0.2 Score=50.58 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=33.4
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRD--EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~--~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
..+ +|++||-.+| |+-...++++.+. ..+|+++|+++.|++.+ +++|.+
T Consensus 164 ~~~-~g~~VlV~Ga--G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~----~~~Ga~ 214 (348)
T 2d8a_A 164 GPI-SGKSVLITGA--GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA----KKVGAD 214 (348)
T ss_dssp SCC-TTCCEEEECC--SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH----HHHTCS
T ss_pred cCC-CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCC
Confidence 457 9999999998 5554444443322 22799999999887544 456765
No 357
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.75 E-value=0.18 Score=51.16 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=37.6
Q ss_pred CCCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecC
Q 009628 422 SPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT 484 (530)
Q Consensus 422 ~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCS 484 (530)
+.++||.|++|||.....- ..+. .. ....+......+|..+.++|||||.|+.....
T Consensus 30 ~~~svDlI~tDPPY~~~~~--~~y~-~~---~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 30 PEESISLVMTSPPFALQRK--KEYG-NL---EQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp CSSCEEEEEECCCCSSSCS--CSSC-SC---HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCeeEEEECCCCCCCcc--cccC-Cc---CHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 4578999999999944311 0111 11 12233344558889999999999999887553
No 358
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=91.75 E-value=0.34 Score=47.94 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=41.5
Q ss_pred CCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCC--CCCCCHHHHHHHHHhC
Q 009628 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTI--NPGENEALVRYALDRY 501 (530)
Q Consensus 424 ~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi--~~~ENE~vV~~~L~~~ 501 (530)
.+||.|.+|+-- +.. -+..|+.+..+|+|||+||+--... .+++.++ |..++.++
T Consensus 181 ~~~dlv~ID~D~---------------------Y~~-t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A-~~ef~~~~ 237 (257)
T 3tos_A 181 TVIALAYFDLDL---------------------YEP-TKAVLEAIRPYLTKGSIVAFDELDNPKWPGENIA-MRKVLGLD 237 (257)
T ss_dssp CCEEEEEECCCC---------------------HHH-HHHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHH-HHHHTCTT
T ss_pred CceEEEEEcCcc---------------------cch-HHHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHH-HHHHHhhC
Confidence 469999999731 011 1256677889999999999887542 3554444 46666665
Q ss_pred CC-ceeecCCC
Q 009628 502 KF-LSLAPQHP 511 (530)
Q Consensus 502 ~~-~~l~~~~p 511 (530)
+. +...|..|
T Consensus 238 ~~~i~~~p~~~ 248 (257)
T 3tos_A 238 HAPLRLLPGRP 248 (257)
T ss_dssp SSCCEECTTCS
T ss_pred CCeEEEccCCC
Confidence 42 55555544
No 359
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=91.58 E-value=1.1 Score=45.36 Aligned_cols=61 Identities=21% Similarity=0.174 Sum_probs=41.7
Q ss_pred CCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHHHhCCC
Q 009628 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALDRYKF 503 (530)
Q Consensus 424 ~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L~~~~~ 503 (530)
..||.|++|+= +--..|.+| + ..+|.+..++++|||+|+--||+ ..|+..|...++
T Consensus 185 ~~~Da~flDgF--sP~kNPeLW----s-----------~e~f~~l~~~~~pgg~laTYtaa-------g~VRR~L~~aGF 240 (308)
T 3vyw_A 185 FKADAVFHDAF--SPYKNPELW----T-----------LDFLSLIKERIDEKGYWVSYSSS-------LSVRKSLLTLGF 240 (308)
T ss_dssp CCEEEEEECCS--CTTTSGGGG----S-----------HHHHHHHHTTEEEEEEEEESCCC-------HHHHHHHHHTTC
T ss_pred cceeEEEeCCC--CcccCcccC----C-----------HHHHHHHHHHhCCCcEEEEEeCc-------HHHHHHHHHCCC
Confidence 46999999961 111234443 3 26888888999999999844443 799999998764
Q ss_pred -ceeec
Q 009628 504 -LSLAP 508 (530)
Q Consensus 504 -~~l~~ 508 (530)
++-+|
T Consensus 241 ~V~k~~ 246 (308)
T 3vyw_A 241 KVGSSR 246 (308)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 33344
No 360
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.54 E-value=0.24 Score=49.52 Aligned_cols=52 Identities=15% Similarity=0.173 Sum_probs=35.7
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
..++++|++||-.+|+ |+....++++++. ..+|+++|++..++..++ ++|.+
T Consensus 135 ~~~~~~g~~vlV~Ga~-ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~----~~g~~ 187 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAA-GGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGAW 187 (327)
T ss_dssp TSCCCTTCEEEESSTT-BHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCS
T ss_pred hhCCCCCCEEEEECCC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCC
Confidence 3468899999988753 5555555554432 248999999998876553 45654
No 361
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.46 E-value=0.21 Score=50.69 Aligned_cols=52 Identities=27% Similarity=0.255 Sum_probs=34.0
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..+++|++||=.+ |.|+-...++++.+. ..+|+++|++..|++.+ +++|.+.
T Consensus 163 ~~~~~g~~VlV~G-g~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~ 215 (353)
T 4dup_A 163 AGLTEGESVLIHG-GTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC----ERLGAKR 215 (353)
T ss_dssp TCCCTTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHHTCSE
T ss_pred cCCCCCCEEEEEc-CCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCCE
Confidence 4688999999663 344444444433321 24899999999997654 4567653
No 362
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.16 E-value=0.3 Score=49.14 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=38.6
Q ss_pred HhcCCCCCCeEEeeccC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 255 HALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 255 ~~LdpqpGe~VLDmCAA--PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
....+++|++||-.+|| -|.-+.++|..++ .+|+++|++..+++.+ +++|.+
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~lga~ 191 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEEL----LRLGAA 191 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHH----HHHTCS
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHH----HhCCCc
Confidence 34678999999999886 3555666666553 4899999999987655 456765
No 363
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.10 E-value=2.7 Score=41.24 Aligned_cols=61 Identities=21% Similarity=0.228 Sum_probs=44.2
Q ss_pred CCCeEEeeccCCC-hHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPG-GKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPG-gKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+|+.| |...++|..+.. ...|+.++++....+.+.+..++.+ .+.++..|...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d 92 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVAD 92 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCC
Confidence 5778888888764 577777766533 3489999999877777777777665 46778888654
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.05 E-value=0.45 Score=48.00 Aligned_cols=52 Identities=23% Similarity=0.199 Sum_probs=35.6
Q ss_pred hcCCCCCCeEEeeccC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAA--PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
...+++|++||=.+|+ -|.-+.++|..++ .+|+++|++..|.+. ++++|.+.
T Consensus 154 ~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~----~~~~ga~~ 207 (342)
T 4eye_A 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEF----VKSVGADI 207 (342)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHH----HHHHTCSE
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHH----HHhcCCcE
Confidence 3468899999987762 2444445555543 489999999998754 44567654
No 365
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.84 E-value=0.35 Score=49.09 Aligned_cols=50 Identities=14% Similarity=0.209 Sum_probs=36.7
Q ss_pred cCCCCC------CeEEeeccCCChHHHHH-HHHc-CCCc--EEEEEeCCHH---HHHHHHHHHHHhCCC
Q 009628 257 LDPQKG------ERILDMCAAPGGKTTAI-ASLL-RDEG--EVVAVDRSHN---KVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpG------e~VLDmCAAPGgKT~~i-A~lm-~~~G--~VvA~D~s~~---kv~~i~~~a~~~gl~ 312 (530)
..+++| ++||=.+| |+-...+ +++. +..| +|+++|++++ |.+ .++++|.+
T Consensus 162 ~~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~----~~~~lGa~ 224 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID----IIEELDAT 224 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH----HHHHTTCE
T ss_pred cCCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH----HHHHcCCc
Confidence 457899 99999997 7766666 6665 5444 4999999988 865 44567864
No 366
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.82 E-value=0.5 Score=47.42 Aligned_cols=53 Identities=23% Similarity=0.319 Sum_probs=35.2
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
..++++|++||-.+| .|+-...++++.+. ..+|+++|++..+++.++ +++|.+
T Consensus 150 ~~~~~~g~~vlI~Ga-~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~---~~~g~~ 203 (345)
T 2j3h_A 150 VCSPKEGETVYVSAA-SGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK---TKFGFD 203 (345)
T ss_dssp TSCCCTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HTSCCS
T ss_pred HhCCCCCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHcCCc
Confidence 357899999999886 34555544444322 248999999998876543 146654
No 367
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=90.80 E-value=0.3 Score=50.59 Aligned_cols=24 Identities=25% Similarity=0.279 Sum_probs=20.4
Q ss_pred HHHHHHHhcCCCCCEEEEEecCCC
Q 009628 463 RMFDQAVQLVRPGGIIVYSTCTIN 486 (530)
Q Consensus 463 ~ll~~A~~lLkpGG~LVYSTCSi~ 486 (530)
.+|..-.+-|+|||++|.++....
T Consensus 190 ~FL~~Ra~EL~pGG~mvl~~~gr~ 213 (359)
T 1m6e_X 190 LFLRCRAQEVVPGGRMVLTILGRR 213 (359)
T ss_dssp HHHHHHHHHBCTTCEEEEEEEECS
T ss_pred HHHHHHHHHhcCCceEEEEEecCC
Confidence 778888899999999999987553
No 368
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.80 E-value=0.46 Score=47.95 Aligned_cols=50 Identities=18% Similarity=0.187 Sum_probs=33.3
Q ss_pred hcCCCCCCeEEeeccC-C-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 256 ALDPQKGERILDMCAA-P-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAA-P-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
...+++|++||=.+|+ + |--+.++|..++ .+|+++ .+..|++ .++++|.+
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~----~~~~lGa~ 196 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLE----YVRDLGAT 196 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHH----HHHHHTSE
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHH----HHHHcCCC
Confidence 3468999999988753 2 334445555442 389999 8888864 45567765
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.64 E-value=0.28 Score=49.76 Aligned_cols=51 Identities=22% Similarity=0.184 Sum_probs=35.3
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
.++++|++||-.+| .|+....++++++. ..+|+++|++..+++.+ +++|.+
T Consensus 158 ~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~g~~ 209 (354)
T 2j8z_A 158 GNVQAGDYVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA----EKLGAA 209 (354)
T ss_dssp SCCCTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHTCS
T ss_pred cCCCCCCEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCc
Confidence 46889999998765 35555555554432 24899999999987655 456754
No 370
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.57 E-value=0.39 Score=48.06 Aligned_cols=53 Identities=23% Similarity=0.314 Sum_probs=35.0
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
...+++|++||-.+|+ |+....++++.+. ..+|+++|++..+++.+ ++++|.+
T Consensus 144 ~~~~~~g~~vlI~Ga~-g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---~~~~g~~ 197 (336)
T 4b7c_A 144 VGQPKNGETVVISGAA-GAVGSVAGQIARLKGCRVVGIAGGAEKCRFL---VEELGFD 197 (336)
T ss_dssp TTCCCTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHTTCCS
T ss_pred hcCCCCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHcCCC
Confidence 4478999999987763 4444444444322 23999999999887644 2456764
No 371
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.04 E-value=0.29 Score=49.80 Aligned_cols=52 Identities=17% Similarity=0.177 Sum_probs=35.7
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
..++++|++||-.+|+ |+....++++++. ..+|+++|+++.+++. ++++|.+
T Consensus 165 ~~~~~~g~~vlV~Gas-ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~ga~ 217 (351)
T 1yb5_A 165 SACVKAGESVLVHGAS-GGVGLAACQIARAYGLKILGTAGTEEGQKI----VLQNGAH 217 (351)
T ss_dssp TSCCCTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCS
T ss_pred hhCCCCcCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH----HHHcCCC
Confidence 3568899999988863 5555554444432 2489999999988763 4566764
No 372
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.95 E-value=6.6 Score=37.71 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=44.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+... .+|+++|++..++..+.+.++..|. .+.++..|...
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~ 91 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSN 91 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCC
Confidence 355676555 5688888888776433 4899999999988877776666553 47778888643
No 373
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.84 E-value=0.48 Score=47.67 Aligned_cols=50 Identities=26% Similarity=0.375 Sum_probs=35.8
Q ss_pred cCCCCCCeEEeecc--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCA--APGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
.++++|++||-.+| +-|..+.++|..++ .+|+++|++..+++.++ ++|.+
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~----~~ga~ 213 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAK----ALGAD 213 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCC
Confidence 36789999999998 33444555555543 48999999999876553 46765
No 374
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.72 E-value=0.2 Score=50.83 Aligned_cols=51 Identities=18% Similarity=0.295 Sum_probs=33.1
Q ss_pred CCCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 009628 423 PNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482 (530)
Q Consensus 423 ~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYST 482 (530)
.++||.|++|||.... . . .+. +...+...-...|..+.++|+|||.|+...
T Consensus 56 ~~svDlI~tDPPY~~~-~--d----~~~--~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIM-L--A----DWD--DHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp TTCEEEEEECCCSBCC-G--G----GGG--TCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcCEEEECCCCCCC-C--C----Ccc--CHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4689999999998432 1 0 111 011122234477888899999999998764
No 375
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=89.59 E-value=0.18 Score=46.26 Aligned_cols=39 Identities=15% Similarity=0.065 Sum_probs=30.1
Q ss_pred CCCCeEEeeccCCC-hHHHHHHHHcCCCcEEEEEeCCHHHHH
Q 009628 260 QKGERILDMCAAPG-GKTTAIASLLRDEGEVVAVDRSHNKVM 300 (530)
Q Consensus 260 qpGe~VLDmCAAPG-gKT~~iA~lm~~~G~VvA~D~s~~kv~ 300 (530)
.++.+|||++||+| .-+..||.-. .-.|+|+|+++..+.
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG 73 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc
Confidence 45789999999999 5777777632 247999999987653
No 376
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.14 E-value=1.2 Score=46.58 Aligned_cols=52 Identities=23% Similarity=0.297 Sum_probs=35.5
Q ss_pred cCCCCCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..+++|++||=.+| .|+-...++++.+.. .+|++++++..|++.+ +++|.+.
T Consensus 216 ~~~~~g~~VlV~Ga-sG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa~~ 268 (447)
T 4a0s_A 216 AQMKQGDIVLIWGA-SGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGCDL 268 (447)
T ss_dssp TCCCTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCCC
T ss_pred cCCCCCCEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCCE
Confidence 56899999997765 355554444443222 4899999999987644 5678764
No 377
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=89.11 E-value=1.8 Score=41.29 Aligned_cols=61 Identities=23% Similarity=0.176 Sum_probs=43.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeC-CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+|| +.-|.||...+++..+..+| +|+++++ +..+...+.+..+..|. .+.++..|...
T Consensus 20 ~~k~vl-ItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 82 (274)
T 1ja9_A 20 AGKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISK 82 (274)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 466777 44557899999988774444 8999999 88887777666665553 36777777643
No 378
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.93 E-value=2.7 Score=40.20 Aligned_cols=62 Identities=24% Similarity=0.324 Sum_probs=44.8
Q ss_pred CCCeEEeeccCCC-hHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPG-GKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPG-gKT~~iA~lm~-~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+|+ | |...++|..+. ....|+.+|++..++..+.+..++.+-..+.++..|...
T Consensus 21 ~~k~vlITGas-g~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 21 KGKVVLVTAAA-GTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84 (266)
T ss_dssp TTCEEEESSCS-SSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC
T ss_pred CCCEEEEECCC-CCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC
Confidence 35677766653 4 56777776553 334899999999998888777766665668888888654
No 379
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.78 E-value=0.74 Score=48.47 Aligned_cols=51 Identities=22% Similarity=0.170 Sum_probs=35.7
Q ss_pred cCCCCCCeEEeecc-CC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGERILDMCA-AP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe~VLDmCA-AP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
.++++|++||=.+| |+ |..+.++|..++ .+|++++.+..|++.+ +++|.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~----~~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEIC----RAMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHH----HHHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHH----HhhCCcE
Confidence 47899999998776 22 444555555543 4899999999987644 5678754
No 380
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.56 E-value=1.4 Score=44.79 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=35.9
Q ss_pred hcCCCCCCeEEeecc-C-CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCA-A-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCA-A-PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..++++|++||=.+| | -|..+.++|..++ .+|+++|++..|++.+ +++|.+.
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~----~~~Ga~~ 211 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFL----KSLGCDR 211 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHH----HHTTCSE
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHH----HHcCCcE
Confidence 347899999999884 2 3444555555542 4899999999887544 4577653
No 381
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.44 E-value=5.7 Score=38.15 Aligned_cols=61 Identities=15% Similarity=0.166 Sum_probs=42.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCC------------HHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... .+|+.+|++ ..++..+....+..|. .+.++..|...
T Consensus 9 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTG-GARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTC
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 356676555 4578888888776444 489999998 7777777666666553 46778888643
No 382
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.40 E-value=5.8 Score=37.88 Aligned_cols=61 Identities=21% Similarity=0.162 Sum_probs=45.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+... .+|+.+|++..++..+.+.....|- .+.++..|...
T Consensus 28 ~~k~vlITG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 89 (262)
T 3rkr_A 28 SGQVAVVTG-ASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSH 89 (262)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCC
Confidence 466777555 5588888888776444 4899999999999888777776653 47778888643
No 383
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.39 E-value=0.52 Score=47.19 Aligned_cols=52 Identities=19% Similarity=0.289 Sum_probs=33.8
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
...+++|++||-.+|+ |+...+++++++. ..+|+++|++..+++.+ +++|.+
T Consensus 140 ~~~~~~g~~vlV~Ga~-ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1wly_A 140 THKVKPGDYVLIHAAA-GGMGHIMVPWARHLGATVIGTVSTEEKAETA----RKLGCH 192 (333)
T ss_dssp TSCCCTTCEEEETTTT-STTHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHHTCS
T ss_pred hhCCCCCCEEEEECCc-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCC
Confidence 3468899999988752 3444434333321 24899999999887655 346654
No 384
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=88.12 E-value=1.4 Score=44.53 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=37.2
Q ss_pred cCCCCC-CeEEeecc-C-CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKG-ERILDMCA-A-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpG-e~VLDmCA-A-PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
.++++| ++||=.+| | -|..+.++|..++ .+|+++..+.+++...++.++++|.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQ 219 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeE
Confidence 378899 99997776 2 2344555666553 478898877776544455667889764
No 385
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.11 E-value=4.1 Score=38.23 Aligned_cols=60 Identities=22% Similarity=0.217 Sum_probs=44.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.|.+||=.+ |.||...++|..+..+ .+|+.+|++..++..+.+.++..+...+.++..|.
T Consensus 13 ~~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTG-AARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 466677555 5688888888877444 48999999999999888888877755566666654
No 386
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.05 E-value=3.5 Score=40.48 Aligned_cols=61 Identities=20% Similarity=0.133 Sum_probs=44.6
Q ss_pred CCCeEEeeccCC-ChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAP-GGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAP-GgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+|+. .|...++|..+.. ...|+.+|++......+.+.+++.+- +.++..|...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~d 91 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVSD 91 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTTC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCCC
Confidence 467888777764 5788888776643 34899999998877777777777653 5677788643
No 387
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.01 E-value=2.8 Score=41.29 Aligned_cols=61 Identities=15% Similarity=0.071 Sum_probs=44.9
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+|+ ||...++|..+... ..|+.+|++..++..+.+.++..|. .+.++..|...
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 91 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRH 91 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 46677766555 88888888776444 4899999999999888777766653 36777788643
No 388
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=87.83 E-value=1.3 Score=43.97 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=33.5
Q ss_pred HhcCCCCCCeEEeec-cCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 255 HALDPQKGERILDMC-AAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 255 ~~LdpqpGe~VLDmC-AAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
....+++|++||=.+ +|+ |.-+.++|..++ .+|++++. ..+. +.++++|.+.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~~-~~~~----~~~~~lGa~~ 199 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTAS-KRNH----AFLKALGAEQ 199 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEEC-HHHH----HHHHHHTCSE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEec-cchH----HHHHHcCCCE
Confidence 446789999999764 222 444455566553 38999984 4443 4567788764
No 389
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=87.67 E-value=1.3 Score=44.15 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=32.2
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHH
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~ 305 (530)
.+|||++||.||.+..+-+. +=--|.|+|+++..++..+.|
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N 41 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESN 41 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHH
Confidence 47999999999999877552 212567999999998887766
No 390
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=86.66 E-value=2.6 Score=40.06 Aligned_cols=62 Identities=23% Similarity=0.187 Sum_probs=45.3
Q ss_pred CCCCeEEeeccC-CChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 260 QKGERILDMCAA-PGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 260 qpGe~VLDmCAA-PGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
..+.+||=.+|+ .||...++|..+... .+|+.++++......+.+.+++.+ .+.++..|...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~ 75 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVAD 75 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCC
Confidence 457788877774 488888888776433 489999999777777777777765 36677888643
No 391
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=85.92 E-value=7.1 Score=37.75 Aligned_cols=61 Identities=13% Similarity=0.178 Sum_probs=42.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHh-CCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~-gl~~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+..+ .+|+++|++..++..+.+..+.. + ..+.++..|...
T Consensus 25 ~~k~vlITG-asggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~ 87 (302)
T 1w6u_A 25 QGKVAFITG-GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRD 87 (302)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCC
Confidence 356666555 5688898888776444 48999999998887665554443 4 347788888643
No 392
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=85.91 E-value=11 Score=36.10 Aligned_cols=61 Identities=21% Similarity=0.154 Sum_probs=41.0
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeC-CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+...| +|+.+++ +..+...+.+.++..|. .+.++..|...
T Consensus 17 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 79 (270)
T 3is3_A 17 DGKVALVTG-SGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQ 79 (270)
T ss_dssp TTCEEEESC-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 356677555 55788888887764444 7888775 56667777776666663 36777888653
No 393
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=85.86 E-value=1.6 Score=48.40 Aligned_cols=56 Identities=29% Similarity=0.532 Sum_probs=37.8
Q ss_pred CCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHHHhCCC
Q 009628 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALDRYKF 503 (530)
Q Consensus 424 ~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L~~~~~ 503 (530)
..||.+++|+-.-. ..|.+| + ..+|.+..+++++||++..-||. ..|+.+|.+..+
T Consensus 170 ~~~da~flD~f~p~--~np~~w----~-----------~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~aGf 225 (689)
T 3pvc_A 170 NQVDAWFLDGFAPA--KNPDMW----N-----------EQLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQAGF 225 (689)
T ss_dssp TCEEEEEECSSCC----CCTTC----S-----------HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHTTC
T ss_pred CceeEEEECCCCCC--CChhhh----h-----------HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCe
Confidence 57999999985311 123332 2 25677777899999998755554 578888887654
No 394
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=85.85 E-value=5.3 Score=39.73 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=46.0
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+..+ ..|++++++..++..+.+..+..+.. .+.++..|...
T Consensus 7 ~~k~vlVTGa-s~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 7 AGRTAFVTGG-ANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70 (319)
T ss_dssp TTCEEEEETT-TSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC
T ss_pred CCCEEEEcCC-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 3567776555 488888888777444 48999999999998888777766642 57888888654
No 395
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=85.69 E-value=0.65 Score=45.77 Aligned_cols=48 Identities=23% Similarity=0.282 Sum_probs=33.7
Q ss_pred CCCCCeEEeeccC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 259 PQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 259 pqpGe~VLDmCAA--PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
+++|++||-.+|+ -|.-+.++|..++ .+|+++|++..|++.+ +++|.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~~ga~ 172 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALP----LALGAE 172 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHH----HHTTCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH----HhcCCC
Confidence 8899999998862 2334445555443 4899999999887644 456765
No 396
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=85.42 E-value=3 Score=40.00 Aligned_cols=58 Identities=17% Similarity=0.298 Sum_probs=40.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+..+ .+|+.+|++..++..+.+. ++ ..+.++..|...
T Consensus 7 ~gk~~lVTG-as~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dv~~ 65 (255)
T 4eso_A 7 QGKKAIVIG-GTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FG-PRVHALRSDIAD 65 (255)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HG-GGEEEEECCTTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hC-CcceEEEccCCC
Confidence 466777555 4578888888776444 4999999999887665543 33 347778888643
No 397
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=85.39 E-value=11 Score=35.24 Aligned_cols=60 Identities=20% Similarity=0.178 Sum_probs=44.5
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+...| +|++++++..+...+.+..+..+. .+.++..|...
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 65 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISD 65 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCC
Confidence 45666444 56888888887774444 899999999999888887777664 36778888643
No 398
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=85.06 E-value=8.4 Score=36.86 Aligned_cols=61 Identities=13% Similarity=0.076 Sum_probs=43.4
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHH-hCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+... ..|+.+|++..++..+.+.... .+-..+.++..|...
T Consensus 8 ~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 8 EAVAVVTG-GSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70 (265)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC
Confidence 55566555 5578888888776444 4899999999998887766655 444447788888654
No 399
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.84 E-value=2.8 Score=41.38 Aligned_cols=62 Identities=19% Similarity=0.305 Sum_probs=44.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||= .-|.||...++|..+...| .|+.+|++..++..+.+..++.+...+.++..|...
T Consensus 40 ~~k~vlV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d 102 (293)
T 3rih_A 40 SARSVLV-TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102 (293)
T ss_dssp TTCEEEE-TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC
T ss_pred CCCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC
Confidence 3556664 4456888888888764444 899999999998877766665554567888888654
No 400
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.53 E-value=0.75 Score=46.36 Aligned_cols=50 Identities=20% Similarity=0.294 Sum_probs=33.4
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
++|++++=+.+|.|+-...++++.+.. .+|+++|++..|++.+ +++|.+.
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~~Ga~~ 212 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL----KDIGAAH 212 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH----HHHTCSE
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCCE
Confidence 667544447677777776655554322 3999999999997654 4577653
No 401
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.46 E-value=11 Score=36.69 Aligned_cols=61 Identities=15% Similarity=0.180 Sum_probs=40.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHH-HHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNK-VMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~k-v~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+..+| +|+.+|++..+ ...+.+..++.|. .+.++..|...
T Consensus 46 ~gk~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 108 (291)
T 3ijr_A 46 KGKNVLITGG-DSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSD 108 (291)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 4667776665 5788888887764444 89999998764 4444455555553 36777888643
No 402
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.27 E-value=8 Score=37.81 Aligned_cols=60 Identities=20% Similarity=0.137 Sum_probs=40.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCC--HHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRS--HNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s--~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=-+ |.||...++|..+...| +|+.+|++ ..+...+.+..++.|. .+.++..|..
T Consensus 48 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~ 110 (294)
T 3r3s_A 48 KDRKALVTG-GDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLS 110 (294)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTT
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCC
Confidence 356677655 45888888888764444 89999987 4556666666666663 3666777754
No 403
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.12 E-value=3.3 Score=41.77 Aligned_cols=54 Identities=15% Similarity=0.236 Sum_probs=33.1
Q ss_pred cCCCCCCeEEeeccC--CChHHHHHHHHcCCCcEEEEE-eCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAV-DRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe~VLDmCAA--PGgKT~~iA~lm~~~G~VvA~-D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..+++|++||=.+|+ -|..+.++|..++ .+++++ +.+++ ....++.++++|.+.
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~-~~~~~~~~~~lGa~~ 219 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRPD-IQKLSDRLKSLGAEH 219 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCSC-HHHHHHHHHHTTCSE
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCccc-hHHHHHHHHhcCCcE
Confidence 478999999988862 3445556666653 355555 44432 222335677888764
No 404
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.97 E-value=7.3 Score=36.44 Aligned_cols=60 Identities=18% Similarity=0.168 Sum_probs=42.9
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+ |.||...+++..+...| +|+++|++..+...+.+.++..+- .+.++..|..
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~ 70 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDIT 70 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCC
Confidence 356676444 56899999987764444 899999999988777666665553 4667777754
No 405
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.94 E-value=6 Score=38.19 Aligned_cols=61 Identities=23% Similarity=0.253 Sum_probs=42.5
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeC-------------CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDR-------------SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~-------------s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+... .+|+++|+ +..++..+.+..+..|. .+.++..|...
T Consensus 14 ~gk~~lVTGa-s~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 88 (280)
T 3pgx_A 14 QGRVAFITGA-ARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRD 88 (280)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 4666775555 578888888776444 48999998 67787777776666553 36677777643
No 406
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=83.87 E-value=8.5 Score=36.42 Aligned_cols=60 Identities=25% Similarity=0.263 Sum_probs=42.6
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+..+| .|++++++..++..+.+.++..|. .+.++..|...
T Consensus 7 ~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~ 67 (247)
T 2jah_A 7 GKVALITG-ASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVAD 67 (247)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 55666555 45888888887774444 899999999988877666655553 46777788643
No 407
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.87 E-value=6.7 Score=37.37 Aligned_cols=60 Identities=23% Similarity=0.168 Sum_probs=44.4
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+...| +|+.+|++..++..+.+.++..|- .+.++..|...
T Consensus 7 ~k~vlVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 67 (252)
T 3h7a_A 7 NATVAVIG-AGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARN 67 (252)
T ss_dssp SCEEEEEC-CSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCC
Confidence 55666544 55788888887764444 899999999999888877777653 47788888654
No 408
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=83.73 E-value=7.4 Score=36.69 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=41.4
Q ss_pred CCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRD-EGEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...+++..+.. ..+|+++++ +..+...+.+..+..+- .+.++..|...
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 68 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTV 68 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTS
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 55666444 568888888876643 348999999 88877776666555442 46777777643
No 409
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=83.61 E-value=6.6 Score=37.90 Aligned_cols=62 Identities=18% Similarity=0.172 Sum_probs=45.0
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCC--ceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... .+|+.+|++..++..+.+..+..+.. .+.++..|...
T Consensus 10 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 10 QDRTYLVTG-GGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 356666555 4588888888776433 48999999999988887777766643 47778888643
No 410
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=83.38 E-value=8 Score=37.41 Aligned_cols=60 Identities=22% Similarity=0.195 Sum_probs=42.9
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+... ..|+.+|++..++..+.+.++..|- .+.++..|...
T Consensus 4 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 64 (264)
T 3tfo_A 4 DKVILITG-ASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTD 64 (264)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCEEEEeC-CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 44566444 4588888888776433 4899999999999888777776653 36677777643
No 411
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=83.32 E-value=5 Score=38.98 Aligned_cols=61 Identities=18% Similarity=0.188 Sum_probs=44.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... ..|+.+|++..++..+.+..+..|- .+.++..|...
T Consensus 31 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d 92 (276)
T 3r1i_A 31 SGKRALITG-ASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQ 92 (276)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 366777555 4588888888776444 4899999999998888777776653 36677788643
No 412
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=83.19 E-value=2.1 Score=43.03 Aligned_cols=51 Identities=22% Similarity=0.187 Sum_probs=32.5
Q ss_pred hcCCCCCCeEEeeccCCChHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD--EGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 256 ~LdpqpGe~VLDmCAAPGgKT~~iA~lm~~--~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
...+++|++||=.+|+ |+-...++++.+. ..+|++.+ +..|.+. ++ +|.+.
T Consensus 137 ~~~~~~g~~VlV~Ga~-G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~----~~-~ga~~ 189 (349)
T 4a27_A 137 VANLREGMSVLVHSAG-GGVGQAVAQLCSTVPNVTVFGTA-STFKHEA----IK-DSVTH 189 (349)
T ss_dssp TSCCCTTCEEEESSTT-SHHHHHHHHHHTTSTTCEEEEEE-CGGGHHH----HG-GGSSE
T ss_pred hcCCCCCCEEEEEcCC-cHHHHHHHHHHHHcCCcEEEEeC-CHHHHHH----HH-cCCcE
Confidence 3568999999987774 5555555555443 34899998 5555433 33 66653
No 413
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=83.16 E-value=8.1 Score=37.02 Aligned_cols=62 Identities=16% Similarity=0.064 Sum_probs=38.6
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCC--CceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl--~~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+...| .|+.++++......+.+.++++.- ..+.++..|...
T Consensus 10 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 74 (262)
T 3ksu_A 10 KNKVIVIAGG-IKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN 74 (262)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC
Confidence 3566775554 5788888988776555 888888765444444444443321 246777787643
No 414
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=83.14 E-value=2.8 Score=45.07 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=40.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
..-+++|+|||.||.+..+... +--.|+|+|.++..+...+.|... ......+..|..+.
T Consensus 87 ~~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i 146 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDI 146 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHH
T ss_pred ccceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhh
Confidence 3568999999999999877542 112489999999988877765311 11234556776553
No 415
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=83.04 E-value=5.9 Score=37.62 Aligned_cols=59 Identities=22% Similarity=0.183 Sum_probs=40.8
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.+||=. -|.||...++|..+..+| +|+++|++..++..+.+..+..|- .+.++..|...
T Consensus 3 k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 62 (256)
T 1geg_A 3 KVALVT-GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSD 62 (256)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CEEEEE-CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 345544 456888888887764444 899999999888777666655553 36777777643
No 416
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=82.93 E-value=15 Score=35.44 Aligned_cols=61 Identities=18% Similarity=0.143 Sum_probs=40.9
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeC-CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+...| .|+.+|+ +..+...+.+..+..|- .+.++..|...
T Consensus 30 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 92 (271)
T 3v2g_A 30 AGKTAFVTGG-SRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRD 92 (271)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 4667776665 5788888887764444 7888755 45677777666666663 36677787643
No 417
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.86 E-value=9.4 Score=36.51 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=45.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+..+| +|+.+|++..++..+.+..+..+-..+.++..|...
T Consensus 9 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 9 QGRSVVVTG-GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71 (262)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC
Confidence 355666555 56888888887764444 899999999998887777666664567888888654
No 418
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=82.50 E-value=12 Score=36.20 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=39.6
Q ss_pred CCCeEEeeccCC-ChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAP-GGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAP-GgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+|+. ||...++|..+... .+|+++|++...-..+.+..++.+ .+.++..|..
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~ 81 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVS 81 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCC
Confidence 467888778764 88898888776444 489999999852233344444444 2566777754
No 419
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.10 E-value=9.4 Score=35.85 Aligned_cols=60 Identities=10% Similarity=0.048 Sum_probs=43.1
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+..+ .+|+++|++..+...+.+.++..+. .+.++..|...
T Consensus 13 ~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 73 (260)
T 3awd_A 13 NRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTN 73 (260)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCC
Confidence 56677554 5688899998876433 4999999999888777666655553 47778888643
No 420
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=82.09 E-value=1.7 Score=43.15 Aligned_cols=51 Identities=14% Similarity=-0.001 Sum_probs=35.1
Q ss_pred cCCCCCC-eEEeeccC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGE-RILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe-~VLDmCAA--PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
..+++|+ +||=.+|+ -|..+.++|..++ .+|++++++..|++.+ +++|.+.
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~----~~lGa~~ 197 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYL----RVLGAKE 197 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHH----HHTTCSE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHH----HHcCCcE
Confidence 4688997 99988872 2444555666553 4799999998887544 5578654
No 421
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=82.08 E-value=21 Score=34.08 Aligned_cols=61 Identities=23% Similarity=0.150 Sum_probs=42.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCC-CceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (530)
.|.+||=-+ |.||...++|..+... .+|+.+|++..++..+.+.....+. ..+..+..|..
T Consensus 9 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 71 (267)
T 3t4x_A 9 KGKTALVTG-STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71 (267)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC
Confidence 355666555 5588888888776444 4999999999998877766665542 33666777753
No 422
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=81.94 E-value=6.3 Score=37.89 Aligned_cols=61 Identities=21% Similarity=0.213 Sum_probs=40.0
Q ss_pred CCCeEEeeccC-CChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAA-PGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAA-PGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+|+ .||...++|..+...| +|+.+|++...-..+.+..++.+ .+.++..|...
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~ 67 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSK 67 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCC
Confidence 36678877775 4889999988775444 89999998752223334444444 25667777543
No 423
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=81.74 E-value=6.6 Score=38.23 Aligned_cols=62 Identities=18% Similarity=0.052 Sum_probs=44.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... .+|+.+|++..++..+.+.....+-..+.++..|...
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 94 (281)
T 4dry_A 32 EGRIALVTG-GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94 (281)
T ss_dssp --CEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC
Confidence 366666555 5588888888877443 4899999999998887766665555556888888654
No 424
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.71 E-value=7.6 Score=36.95 Aligned_cols=61 Identities=18% Similarity=0.106 Sum_probs=43.6
Q ss_pred CCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHh--CCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~--gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+.. ...|+.+|++..++..+.+.+.+. +...+.++..|...
T Consensus 7 ~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 7 KGLAIITG-ASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70 (250)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC
Confidence 55666555 458888888877643 348999999999998887776665 33457778888654
No 425
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=81.56 E-value=13 Score=35.10 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=42.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcch
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~-~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (530)
.|.+||=-+ |.||...++|..+.. ...|+.+|++..++..+.+.....+-..+.++..|.
T Consensus 11 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (252)
T 3f1l_A 11 NDRIILVTG-ASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71 (252)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 355666555 557888888876643 348999999999988877766655544567777775
No 426
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=81.54 E-value=14 Score=34.35 Aligned_cols=59 Identities=25% Similarity=0.266 Sum_probs=41.0
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCc-EEEE-EeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEG-EVVA-VDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G-~VvA-~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.+|| +.-|.||...+++..+...| +|++ .+++..+...+.+..+..+- .+.++..|...
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 62 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSK 62 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTS
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCC
Confidence 3455 45567899999988774444 7888 58999888877766665553 46777787643
No 427
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=81.52 E-value=0.82 Score=45.63 Aligned_cols=80 Identities=14% Similarity=0.258 Sum_probs=56.6
Q ss_pred CCCC--CCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHH
Q 009628 420 GFSP--NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYA 497 (530)
Q Consensus 420 ~f~~--~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~ 497 (530)
+|++ ++||.|++|..- |.... --+.-.+|+.--..+-..|+++|+|||++|...--+--.-.|.+|..+
T Consensus 204 G~P~~~grYDlVfvNv~T------pyR~H---HYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~al 274 (324)
T 3trk_A 204 GLPATLGRYDLVVINIHT------PFRIH---HYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVL 274 (324)
T ss_dssp CCCGGGCCEEEEEEECCC------CCCSS---HHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHH
T ss_pred CCCCcCCceeEEEEecCC------ccccc---hHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHH
Confidence 5554 589999998642 22222 123334444444467789999999999999998888777778888888
Q ss_pred HHhCCCceeec
Q 009628 498 LDRYKFLSLAP 508 (530)
Q Consensus 498 L~~~~~~~l~~ 508 (530)
-++|...++..
T Consensus 275 ARkF~~~rv~~ 285 (324)
T 3trk_A 275 GRKFRSSRALK 285 (324)
T ss_dssp HTTEEEEEEEC
T ss_pred Hhhheeeeeec
Confidence 88887776654
No 428
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=81.31 E-value=16 Score=35.01 Aligned_cols=61 Identities=20% Similarity=0.273 Sum_probs=41.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHH-HHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLA-AEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a-~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+...| +|++++++..++..+.+.. +..|. .+.++..|...
T Consensus 20 ~~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~ 82 (267)
T 1vl8_A 20 RGRVALVTG-GSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSN 82 (267)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 455666555 56888888887764444 8999999998887665544 34453 36677777643
No 429
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=81.31 E-value=1.5 Score=43.49 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=32.4
Q ss_pred cCCCCCC-eEEeecc--CCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGE-RILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe-~VLDmCA--APGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+++++++ +||=.+| +-|.-+.++|.+++ .+|+++|.+..|++.+ +++|.+.
T Consensus 141 ~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~ 194 (324)
T 3nx4_A 141 AGIRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYL----KSLGANR 194 (324)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHH----HHHTCSE
T ss_pred cccCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHH----HhcCCCE
Confidence 3455533 4776665 22444556666553 3899999999997655 4578764
No 430
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=81.25 E-value=15 Score=34.35 Aligned_cols=58 Identities=21% Similarity=0.199 Sum_probs=39.5
Q ss_pred CCCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 260 QKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 260 qpGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.++.+||=.+ |.||...++|..+... .+|+.+|++..++..+.+. ++ ..+.++..|..
T Consensus 12 ~~~k~vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D~~ 70 (249)
T 3f9i_A 12 LTGKTSLITG-ASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LK-DNYTIEVCNLA 70 (249)
T ss_dssp CTTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HC-SSEEEEECCTT
T ss_pred CCCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH---hc-cCccEEEcCCC
Confidence 3567777555 5688888888776444 4899999999887765443 32 34666777653
No 431
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=81.22 E-value=12 Score=36.10 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=42.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHH-hCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+...| .|+.+|++..++..+.+.... .| ..+.++..|...
T Consensus 26 ~~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 88 (277)
T 4fc7_A 26 RDKVAFITG-GGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRA 88 (277)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTC
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCC
Confidence 366677555 45888888888775445 899999999888776554433 34 347778888643
No 432
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.08 E-value=8.1 Score=37.11 Aligned_cols=57 Identities=28% Similarity=0.320 Sum_probs=38.5
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+...| +|+++|++..++..+ +++++ ..+.++..|...
T Consensus 6 ~k~vlITG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~D~~~ 63 (263)
T 2a4k_A 6 GKTILVTG-AASGIGRAALDLFAREGASLVAVDREERLLAEA---VAALE-AEAIAVVADVSD 63 (263)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTCC-SSEEEEECCTTS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhc-CceEEEEcCCCC
Confidence 55666444 56888888887764444 899999998876544 33343 347777888643
No 433
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=80.96 E-value=13 Score=35.69 Aligned_cols=61 Identities=18% Similarity=0.250 Sum_probs=42.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCC------------HHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+... .+|+.+|++ ..++..+.+..+..|- .+.++..|...
T Consensus 9 ~~k~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 82 (281)
T 3s55_A 9 EGKTALITGG-ARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVKD 82 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCCC
Confidence 3666775554 588888888777444 489999997 6666666666666653 46777888643
No 434
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=80.93 E-value=13 Score=35.76 Aligned_cols=61 Identities=25% Similarity=0.189 Sum_probs=43.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+| .||...++|..+..+| +|+++|++..++..+.+.++..|. .+.++..|...
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~ 82 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRS 82 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 3566775554 5888888887764444 899999999888777666655553 36777787643
No 435
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=80.67 E-value=20 Score=34.53 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=42.5
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+...| +|++++++..++..+.+.++..+. .+.++..|...
T Consensus 44 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d 104 (285)
T 2c07_A 44 NKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSK 104 (285)
T ss_dssp SCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCC
Confidence 55677555 55889999988775555 899999999888776665554443 36777777643
No 436
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.36 E-value=12 Score=35.85 Aligned_cols=61 Identities=13% Similarity=0.151 Sum_probs=44.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+... .+|+.+|++..++..+.+..++.|. .+.++..|...
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 71 (264)
T 3ucx_A 10 TDKVVVISGV-GPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITD 71 (264)
T ss_dssp TTCEEEEESC-CTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCcEEEEECC-CcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 4666775555 577788887766444 4899999999999888877776653 46778888653
No 437
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=80.31 E-value=15 Score=35.52 Aligned_cols=62 Identities=13% Similarity=0.099 Sum_probs=42.5
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHh----CCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEM----GLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~----gl~~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+..+ .+|++++++..++..+.+..+.. .-..+.++..|...
T Consensus 17 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T 1yxm_A 17 QGQVAIVTG-GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN 83 (303)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC
Confidence 356777555 5688999998776444 48999999998887766555441 11347778887643
No 438
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=80.02 E-value=4.4 Score=41.11 Aligned_cols=47 Identities=26% Similarity=0.328 Sum_probs=31.0
Q ss_pred CCCCCeEEeeccCCChHH---HHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 259 PQKGERILDMCAAPGGKT---TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT---~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
+++|++||=.+|+ |+-. .++|..++ .+|++++ +..|.+ .++++|.+.
T Consensus 181 ~~~g~~VlV~Ga~-G~vG~~~~qla~~~G--a~Vi~~~-~~~~~~----~~~~lGa~~ 230 (375)
T 2vn8_A 181 NCTGKRVLILGAS-GGVGTFAIQVMKAWD--AHVTAVC-SQDASE----LVRKLGADD 230 (375)
T ss_dssp TCTTCEEEEETTT-SHHHHHHHHHHHHTT--CEEEEEE-CGGGHH----HHHHTTCSE
T ss_pred cCCCCEEEEECCC-CHHHHHHHHHHHhCC--CEEEEEe-ChHHHH----HHHHcCCCE
Confidence 7899999988743 4444 44455443 4899999 566653 456778653
No 439
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=79.78 E-value=13 Score=34.56 Aligned_cols=50 Identities=18% Similarity=0.196 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 269 CAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 269 CAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.-|.||...++|..+... ..|+.+|++..++..+.+ +++ ..+.++..|..
T Consensus 7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~D~~ 57 (230)
T 3guy_A 7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN---CLS-NNVGYRARDLA 57 (230)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TCS-SCCCEEECCTT
T ss_pred ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHh-hccCeEeecCC
Confidence 345688888888776444 489999999988765443 332 23556666654
No 440
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=79.60 E-value=16 Score=35.71 Aligned_cols=61 Identities=25% Similarity=0.140 Sum_probs=42.6
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+... .+|+++|++..++..+.+..+..|. .+.++..|...
T Consensus 33 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 94 (291)
T 3cxt_A 33 KGKIALVTG-ASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTD 94 (291)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCC
Confidence 356676555 5688888888766444 4899999999888777666655553 36677777643
No 441
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=79.56 E-value=14 Score=34.38 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=41.1
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHH-hCCCceEEEEcchh
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDAL 322 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~ 322 (530)
|.+||=. -|.||...+++..+... .+|++++++..+...+.+.... .+. .+.++..|..
T Consensus 7 ~~~vlVt-GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~ 67 (248)
T 2pnf_A 7 GKVSLVT-GSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLL 67 (248)
T ss_dssp TCEEEET-TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTT
T ss_pred CCEEEEE-CCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCC
Confidence 5566644 45789999998776433 4899999999888776655443 343 4677777754
No 442
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=79.50 E-value=12 Score=35.65 Aligned_cols=60 Identities=18% Similarity=0.231 Sum_probs=42.4
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEE-eCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAV-DRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~-D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+..+| +|+.+ +++..++..+.+..+..|. .+.++..|...
T Consensus 4 ~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 65 (258)
T 3oid_A 4 NKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQ 65 (258)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 55666444 56888888888775445 77775 9999988887777666553 46778888653
No 443
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=79.45 E-value=16 Score=34.56 Aligned_cols=60 Identities=22% Similarity=0.296 Sum_probs=41.2
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHh-CCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~-gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+..+| +|+++|++..++..+.+..+.. +. .+.++..|...
T Consensus 7 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~ 68 (263)
T 3ai3_A 7 GKVAVITG-SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVAT 68 (263)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTS
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCC
Confidence 55666444 56888888887764444 8999999998887665544433 43 46777777643
No 444
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=79.43 E-value=21 Score=33.31 Aligned_cols=56 Identities=18% Similarity=0.241 Sum_probs=40.4
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k~ 324 (530)
|.+||=. -|.||...++|..+...+.|++++++..++..+.+ +..+..+..|....
T Consensus 5 ~k~vlIT-Gas~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~ 60 (245)
T 3e9n_A 5 KKIAVVT-GATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IEGVEPIESDIVKE 60 (245)
T ss_dssp -CEEEEE-STTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------STTEEEEECCHHHH
T ss_pred CCEEEEE-cCCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hcCCcceecccchH
Confidence 4555644 45688888998888667899999999988765533 34578888887653
No 445
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=79.36 E-value=13 Score=35.30 Aligned_cols=60 Identities=17% Similarity=0.219 Sum_probs=42.0
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+..+ .+|+.+|++..++..+.+..+..+ ..+.++..|...
T Consensus 6 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 66 (257)
T 3imf_A 6 EKVVIITG-GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRN 66 (257)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCC
Confidence 55666444 5688888888877444 489999999998887766554444 247778888643
No 446
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.24 E-value=16 Score=35.65 Aligned_cols=62 Identities=15% Similarity=0.274 Sum_probs=43.6
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCC--ceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+... ..|+++|++..++..+.+.+...|.. .+.++..|...
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d 89 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 355666444 5688888888776444 48999999999888776666555531 47778888643
No 447
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=79.14 E-value=12 Score=36.02 Aligned_cols=61 Identities=18% Similarity=0.111 Sum_probs=44.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||= .-|.||...++|..+... ..|+++|++..++..+.+.++..|.. +..+..|...
T Consensus 27 ~~k~~lV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d 88 (270)
T 3ftp_A 27 DKQVAIV-TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVND 88 (270)
T ss_dssp TTCEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTC
T ss_pred CCCEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCC
Confidence 3556664 456688888888776444 48999999999998888877777643 5667777543
No 448
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=79.01 E-value=26 Score=34.07 Aligned_cols=61 Identities=16% Similarity=0.139 Sum_probs=43.2
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc----EEEEEeCCHHHHHHHHHHHHHhC-CCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG----EVVAVDRSHNKVMDIQKLAAEMG-LKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G----~VvA~D~s~~kv~~i~~~a~~~g-l~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+...| .|+.++++..++..+.+..+... -..+.++..|...
T Consensus 33 ~k~~lVTG-as~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d 98 (287)
T 3rku_A 33 KKTVLITG-ASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ 98 (287)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC
T ss_pred CCEEEEec-CCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC
Confidence 66777555 45788888887664334 89999999999888776665542 2347778888643
No 449
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=78.93 E-value=5.2 Score=40.63 Aligned_cols=47 Identities=19% Similarity=0.040 Sum_probs=33.6
Q ss_pred CCCCeEEeeccC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 260 QKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 260 qpGe~VLDmCAA--PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
++|++||=.+|+ -|..+.++|.+++ .+|+++. +..|++ .++++|.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~----~~~~lGa~~ 211 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFD----LAKSRGAEE 211 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHH----HHHHTTCSE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHH----HHHHcCCcE
Confidence 899999988873 4556666777653 3788885 777754 566788764
No 450
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=78.66 E-value=10 Score=40.09 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=29.1
Q ss_pred ccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHH
Q 009628 269 CAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQK 304 (530)
Q Consensus 269 CAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~ 304 (530)
.-|.|...+.+|..+...| +|+++|+++.|++.+.+
T Consensus 13 vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 13 MIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ 49 (446)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred EEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence 4577888888888776555 89999999999887753
No 451
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=78.41 E-value=10 Score=36.14 Aligned_cols=61 Identities=15% Similarity=0.102 Sum_probs=44.2
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... .+|+.+|++..+...+.+..+..|- .+.++..|...
T Consensus 11 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 72 (256)
T 3gaf_A 11 NDAVAIVTG-AAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTD 72 (256)
T ss_dssp TTCEEEECS-CSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 355666544 5578888888776443 4899999999999888877777663 46777888643
No 452
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=78.35 E-value=2.5 Score=42.71 Aligned_cols=60 Identities=15% Similarity=0.204 Sum_probs=39.3
Q ss_pred cchHHHHHhcC--CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHHHHHhC
Q 009628 248 LPSIVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH---NKVMDIQKLAAEMG 310 (530)
Q Consensus 248 ~~S~v~~~~Ld--pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~---~kv~~i~~~a~~~g 310 (530)
.|-.++..++. -.+|+.|||-+||+|.-+.+. ..+ .-..+++|+++ .-+..+++++++.|
T Consensus 227 kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa-~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 227 KPAAVIERLVRALSHPGSTVLDFFAGSGVTARVA-IQE--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHH-HHH--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHH-HHc--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 44444444432 368999999999999644333 333 35799999999 88877777766654
No 453
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=78.27 E-value=16 Score=34.29 Aligned_cols=60 Identities=23% Similarity=0.258 Sum_probs=42.0
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeC-CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+|| +.-|.||...++|..+..+| +|+++++ +..++..+.+..+..+. .+.++..|...
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 65 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVAN 65 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 55666 44566889999988775444 8999999 88888777666655553 36777777643
No 454
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=78.15 E-value=9.6 Score=36.52 Aligned_cols=60 Identities=22% Similarity=0.272 Sum_probs=42.6
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHH-hCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+... .+|+.+|++..++..+.+...+ .+ ..+.++..|...
T Consensus 20 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~ 81 (266)
T 4egf_A 20 GKRALITG-ATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAE 81 (266)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCC
Confidence 55666544 5688888888777444 4899999999998887666554 44 347778888643
No 455
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=78.13 E-value=23 Score=33.47 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=42.5
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=.+ |.||...++|..+... .+|+++|++..++..+.+..+..|. .+.++..|...
T Consensus 8 ~~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 69 (260)
T 2ae2_A 8 EGCTALVTG-GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSS 69 (260)
T ss_dssp TTCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 356677554 5688888888766444 4899999999988776665555443 46777777643
No 456
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=77.99 E-value=11 Score=35.50 Aligned_cols=57 Identities=18% Similarity=0.132 Sum_probs=38.9
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+.+||=-+ |.||...++|..+... ..|+++|++..++..+.+.. +- .+.++..|...
T Consensus 3 ~k~vlVTG-as~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~ 60 (235)
T 3l6e_A 3 LGHIIVTG-AGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GN-AVIGIVADLAH 60 (235)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cC-CceEEECCCCC
Confidence 34455444 5588888888776444 48999999998877665443 32 47788888653
No 457
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=77.99 E-value=13 Score=34.63 Aligned_cols=59 Identities=20% Similarity=0.157 Sum_probs=40.2
Q ss_pred CeEEeeccCCChHHHHHHHHcCCCc--------EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 263 ERILDMCAAPGGKTTAIASLLRDEG--------EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 263 e~VLDmCAAPGgKT~~iA~lm~~~G--------~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.+|| +.-|.||...+++..+...| .|++++++..++..+.+..+..+ ..+.++..|...
T Consensus 3 k~vl-ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 69 (244)
T 2bd0_A 3 HILL-ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISD 69 (244)
T ss_dssp EEEE-EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTS
T ss_pred CEEE-EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCC
Confidence 3455 44467888888887664444 79999999988877665554433 247777888643
No 458
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=77.92 E-value=15 Score=34.93 Aligned_cols=58 Identities=22% Similarity=0.286 Sum_probs=39.6
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+..+| +|+.+|++..++..+. ++++ ..+.++..|...
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~D~~~ 65 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAA---AEIG-PAAYAVQMDVTR 65 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHC-TTEEEEECCTTC
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhC-CCceEEEeeCCC
Confidence 356677555 56888888887764444 8999999998876543 4444 236777777643
No 459
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=77.88 E-value=4.3 Score=38.35 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=37.3
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCC------CceEEEEcchh
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGL------KCITTYKLDAL 322 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl------~~i~~~~~Da~ 322 (530)
|.+||= .-|.||...++|..+... .+|+++|++..+...+.+.++..|. ..+.++..|..
T Consensus 7 ~k~vlI-TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 73 (264)
T 2pd6_A 7 SALALV-TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVS 73 (264)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTT
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCC
Confidence 556664 445688888888766433 4899999999887765544333331 23566666654
No 460
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.60 E-value=17 Score=34.74 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=40.0
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCC--CceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl--~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+..+ .+|+++|++..++..+.+.....+. ..+.++..|...
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 69 (278)
T 1spx_A 6 EKVAIITG-SSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69 (278)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC
Confidence 45566444 5688888888776444 4899999999887766554422221 246777777643
No 461
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=77.56 E-value=8.1 Score=37.40 Aligned_cols=60 Identities=15% Similarity=0.054 Sum_probs=42.8
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+... .+|+++|++..++..+.+.++..|. .+.++..|...
T Consensus 24 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 84 (279)
T 3sju_A 24 PQTAFVTG-VSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTS 84 (279)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 55677555 5578888888776444 4899999999998887776665553 47778888643
No 462
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=77.47 E-value=6.4 Score=37.58 Aligned_cols=61 Identities=23% Similarity=0.292 Sum_probs=40.0
Q ss_pred CCCeEEeeccC-CChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAA-PGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAA-PGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+|+ .||...++|..+... .+|+++|++...-..+.++.++.+ .+.++..|...
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~ 69 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQ 69 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCC
Confidence 36678877776 388888888776443 489999999853333444444444 25677777643
No 463
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=77.44 E-value=11 Score=36.01 Aligned_cols=60 Identities=22% Similarity=0.242 Sum_probs=37.5
Q ss_pred CCCeEEeeccCC-ChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAP-GGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAP-GgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+|+. ||...++|..+... .+|+.+|++......+.+..++.+ ...++..|..
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~ 69 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVA 69 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCC
Confidence 366788777763 88999998776444 489999998722222333333333 2356667754
No 464
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=77.38 E-value=14 Score=34.29 Aligned_cols=60 Identities=25% Similarity=0.204 Sum_probs=41.8
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHH-HhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAA-EMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~-~~gl~~i~~~~~Da~k 323 (530)
+.+||=. -|.||...++|..+...| .|+.++++..++..+.+... ..+ ..+.++..|...
T Consensus 2 ~k~vlIT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 63 (235)
T 3l77_A 2 MKVAVIT-GASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSK 63 (235)
T ss_dssp CCEEEEE-SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTC
T ss_pred CCEEEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCC
Confidence 3445544 456888888887774444 89999999999888766554 444 347778888654
No 465
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=77.02 E-value=2.7 Score=41.75 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=34.7
Q ss_pred cCCCCCC-eEEeeccC--CChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 009628 257 LDPQKGE-RILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (530)
Q Consensus 257 LdpqpGe-~VLDmCAA--PGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~ 313 (530)
.++++|+ +||=.+|+ -|.-+.++|..++ .+|++++++..|++.+ +++|.+.
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~----~~lGa~~ 198 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYL----KQLGASE 198 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHH----HHHTCSE
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH----HHcCCcE
Confidence 4678897 99988873 2334455555554 4699999998887544 4578653
No 466
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=76.57 E-value=15 Score=34.70 Aligned_cols=58 Identities=22% Similarity=0.239 Sum_probs=38.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... .+|+.+|++..++..+.+... ..+..+..|...
T Consensus 8 ~gk~~lVTG-as~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d 66 (248)
T 3op4_A 8 EGKVALVTG-ASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVTN 66 (248)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTC
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----ccceEEEEeCCC
Confidence 355666555 4578888888776444 489999999988776554432 235667777543
No 467
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=76.49 E-value=19 Score=34.43 Aligned_cols=61 Identities=21% Similarity=0.283 Sum_probs=44.7
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+... .+|++++++..++..+.+.++..|.. .+.++..|...
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC
Confidence 55666554 5688888888776444 48999999999988887777776653 47778888643
No 468
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=76.34 E-value=21 Score=33.64 Aligned_cols=59 Identities=15% Similarity=0.139 Sum_probs=42.1
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
|.+|| +.-|.||...+++..+..+ ..|++++++..++..+.+..+..+. .+..+..|..
T Consensus 14 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~ 73 (266)
T 1xq1_A 14 AKTVL-VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDAS 73 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCC
Confidence 55666 4455788899998776444 4899999999988777666655553 3677777754
No 469
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=76.27 E-value=25 Score=33.94 Aligned_cols=60 Identities=22% Similarity=0.184 Sum_probs=40.6
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHH-------HHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHN-------KVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~-------kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+...| .|+.+|++.. ++..+.+..+..|. .+.++..|...
T Consensus 9 ~k~vlVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 76 (285)
T 3sc4_A 9 GKTMFISG-GSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRD 76 (285)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 55666555 45788888887774444 9999999987 45555555555553 47778888653
No 470
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.22 E-value=16 Score=35.13 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=42.3
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCC--ceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+..+| +|+++|++..++..+.+..+..+.. .+.++..|...
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 69 (280)
T 1xkq_A 6 NKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69 (280)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC
Confidence 55666544 56888888887764444 8999999999887776655544431 47778888643
No 471
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=76.14 E-value=20 Score=34.52 Aligned_cols=59 Identities=15% Similarity=0.044 Sum_probs=40.2
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCH-HHHHHHHHHHH-HhCCCceEEEEcchh
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSH-NKVMDIQKLAA-EMGLKCITTYKLDAL 322 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~-~kv~~i~~~a~-~~gl~~i~~~~~Da~ 322 (530)
|.+||=.+ |.||...++|..+... ..|+.+|++. .++..+.+.++ ..| ..+.++..|..
T Consensus 23 ~k~~lVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~ 84 (288)
T 2x9g_A 23 APAAVVTG-AAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLT 84 (288)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCS
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecC
Confidence 55666555 5588888888766433 4899999998 77776665554 344 34677777754
No 472
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=76.13 E-value=13 Score=35.45 Aligned_cols=61 Identities=23% Similarity=0.271 Sum_probs=42.4
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=. -|.||...++|..+...| .|+.+|++..++..+.+..+..|. .+.++..|...
T Consensus 6 ~~k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 67 (262)
T 1zem_A 6 NGKVCLVT-GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTS 67 (262)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTC
T ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 35667644 456888888887764444 899999999888776665554443 36777777643
No 473
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=75.97 E-value=15 Score=34.50 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=40.7
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeC-CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+.+|| +.-|.||...++|..+..+| +|+.+|+ +..+...+.+..+..|. .+.++..|...
T Consensus 4 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 65 (246)
T 3osu_A 4 TKSAL-VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVAD 65 (246)
T ss_dssp SCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTC
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCC
Confidence 44555 44566888888887764444 8888887 66777777777666654 36677777643
No 474
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=75.78 E-value=29 Score=33.31 Aligned_cols=60 Identities=17% Similarity=0.117 Sum_probs=39.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHH-HHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNK-VMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~k-v~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+ |.||...++|..+...| +|++++++..+ ...+.+.+++.|. .+.++..|..
T Consensus 28 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~ 89 (283)
T 1g0o_A 28 EGKVALVTG-AGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVG 89 (283)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCC
Confidence 355666554 56888888888774444 89999998654 4444444555553 3667777754
No 475
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=75.78 E-value=2.2 Score=43.03 Aligned_cols=50 Identities=6% Similarity=0.058 Sum_probs=37.8
Q ss_pred CCCCCeEEeeccCCChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q 009628 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (530)
Q Consensus 259 pqpGe~VLDmCAAPGgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl 311 (530)
-.+|+.|||-+||+|.-+ +.|..+ .-..+++|+++.-+..++++.++.+.
T Consensus 250 ~~~~~~VlDpF~GsGtt~-~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTG-LVAERE--SRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CCTTCEEEETTCTTCHHH-HHHHHT--TCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCCEEEECCCCCCHHH-HHHHHc--CCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 368999999999999633 334444 35899999999988887777665554
No 476
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=75.16 E-value=22 Score=33.39 Aligned_cols=57 Identities=25% Similarity=0.236 Sum_probs=38.9
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=.+| .||...++|..+..+ .+|+.+|++..++..+.+ +++- .+.++..|...
T Consensus 9 ~k~vlITGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~D~~~ 66 (261)
T 3n74_A 9 GKVALITGA-GSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG---EIGD-AALAVAADISK 66 (261)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCT-TEEEEECCTTS
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---HhCC-ceEEEEecCCC
Confidence 556765555 477777787766434 489999999988766544 4442 46777888643
No 477
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=74.90 E-value=19 Score=33.21 Aligned_cols=58 Identities=21% Similarity=0.295 Sum_probs=39.6
Q ss_pred eEEeeccCCChHHHHHHHHcCCCc-EEEEE-eCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 264 RILDMCAAPGGKTTAIASLLRDEG-EVVAV-DRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 264 ~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~-D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
+|| +.-|.||...+++..+...| +|+++ +++..+...+.+..+..+.....++..|..
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 62 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTT
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCC
Confidence 455 34457999999988775555 88888 899988877766665555433333777754
No 478
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=74.84 E-value=11 Score=35.19 Aligned_cols=61 Identities=21% Similarity=0.215 Sum_probs=42.8
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCC-HHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRS-HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s-~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||= .-|.|+...+++..+..+| +|+++|++ ..++..+.+..+..+ ..+.++..|...
T Consensus 6 ~~k~vlV-TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 68 (258)
T 3afn_B 6 KGKRVLI-TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLAT 68 (258)
T ss_dssp TTCEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTS
T ss_pred CCCEEEE-eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCC
Confidence 3567774 4456899999987774444 89999999 777776666555544 347778888643
No 479
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=74.79 E-value=9.2 Score=37.11 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=41.3
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeC-CHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=-+ |.||...++|..+...| +|+.+|+ +..++..+.+..+...-..+.++..|...
T Consensus 25 ~k~~lVTG-as~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 87 (281)
T 3v2h_A 25 TKTAVITG-STSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK 87 (281)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC
Confidence 55666555 55888888887764444 8999999 66777766665554433457777777643
No 480
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=74.75 E-value=37 Score=31.29 Aligned_cols=56 Identities=27% Similarity=0.274 Sum_probs=37.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+ |.|+...+++..+..+ .+|+++|++..++..+.+ +. ..++++..|..
T Consensus 6 ~~~~vlVTG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~--~~~~~~~~D~~ 62 (244)
T 1cyd_A 6 SGLRALVTG-AGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK---EC--PGIEPVCVDLG 62 (244)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HS--TTCEEEECCTT
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hc--cCCCcEEecCC
Confidence 456777444 5688999998776433 489999999887655433 22 23555666654
No 481
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=74.72 E-value=14 Score=35.77 Aligned_cols=60 Identities=18% Similarity=0.114 Sum_probs=43.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+ |.||...++|..+... .+|+.+|++..+...+.+.....|- .+.++..|..
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~ 92 (275)
T 4imr_A 32 RGRTALVTG-SSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLS 92 (275)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCC
Confidence 366677555 5588888888776433 4899999999988887777666553 4677777754
No 482
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=74.37 E-value=14 Score=40.52 Aligned_cols=56 Identities=29% Similarity=0.402 Sum_probs=36.8
Q ss_pred CCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHHHhCCC
Q 009628 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALDRYKF 503 (530)
Q Consensus 424 ~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L~~~~~ 503 (530)
..||.|++|+-. |......|+. .+|.+..++++|||++...||. ..|+..|.+-++
T Consensus 178 ~~~d~~~~D~f~------p~~np~~w~~-----------~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~aGf 233 (676)
T 3ps9_A 178 QKVDAWFLDGFA------PAKNPDMWTQ-----------NLFNAMARLARPGGTLATFTSA-------GFVRRGLQDAGF 233 (676)
T ss_dssp TCEEEEEECCSC------GGGCGGGSCH-----------HHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHHTC
T ss_pred CcccEEEECCCC------CcCChhhhhH-----------HHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCe
Confidence 569999999843 2221113332 5777778899999987644443 578888876543
No 483
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=74.32 E-value=14 Score=35.79 Aligned_cols=61 Identities=20% Similarity=0.108 Sum_probs=42.1
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... ..|+.+|++..++..+.+.....|- .+.++..|...
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 88 (283)
T 3v8b_A 27 PSPVALITG-AGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSD 88 (283)
T ss_dssp CCCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCC
Confidence 466677555 5578888888766444 4899999999888776665544442 36777788643
No 484
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=74.27 E-value=24 Score=33.60 Aligned_cols=61 Identities=23% Similarity=0.291 Sum_probs=43.6
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCC------------HHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... ..|+.+|++ ..++..+.+..+..+- .+.++..|...
T Consensus 12 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITG-AARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRD 85 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCC
Confidence 466677555 5588888888777444 489999987 7777777776666663 47788888654
No 485
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=73.98 E-value=42 Score=31.62 Aligned_cols=61 Identities=15% Similarity=0.090 Sum_probs=41.0
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHh-CCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~-gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+... .+|+++|++..++..+.+..+.. +-..+.++..|...
T Consensus 7 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 69 (260)
T 2z1n_A 7 GKLAVVTA-GSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE 69 (260)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC
Confidence 55666555 5588888888776444 48999999998887766555432 11146777788643
No 486
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=73.70 E-value=20 Score=33.03 Aligned_cols=56 Identities=23% Similarity=0.287 Sum_probs=38.0
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
+.+|| +.-|.||...+++..+...| +|++++++..++..+. ++++ .+..+..|...
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~--~~~~~~~D~~~ 61 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALA---AELE--GALPLPGDVRE 61 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHST--TCEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHhh--hceEEEecCCC
Confidence 34566 45567899999988774444 8999999988766543 3332 46677777643
No 487
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=73.51 E-value=17 Score=33.81 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=38.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+ |.||...++|..+..+| +|+++|++..++..+.+ +++-..+..+..|..
T Consensus 10 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~ 68 (254)
T 2wsb_A 10 DGACAAVTG-AGSGIGLEICRAFAASGARLILIDREAAALDRAAQ---ELGAAVAARIVADVT 68 (254)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHGGGEEEEEECCTT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhcccceeEEEEecC
Confidence 356677544 56888988888774444 89999999887765443 333222277777754
No 488
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=73.08 E-value=18 Score=34.75 Aligned_cols=61 Identities=15% Similarity=0.120 Sum_probs=43.5
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+ |.||...++|..+... .+|+.+|++..++..+.+..+..|. .+.++..|...
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 86 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTS 86 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCC
Confidence 356666544 5688888888776444 4899999999998888777766653 36677777543
No 489
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=73.07 E-value=8.3 Score=36.94 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=38.9
Q ss_pred CCCeEEeecc-CCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCA-APGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCA-APGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+| |.||...++|..+... ..|+.+|++..+. +.+.+++++- .+.++..|..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~-~~~~~~~Dv~ 66 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL--IQRITDRLPA-KAPLLELDVQ 66 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHTTSSS-CCCEEECCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH--HHHHHHhcCC-CceEEEccCC
Confidence 4667888887 4899999998877444 4899999997652 1223333332 3556667754
No 490
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=73.02 E-value=21 Score=33.57 Aligned_cols=54 Identities=22% Similarity=0.280 Sum_probs=36.7
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
|.+||=. -|.||...++|..+..+ .+|++++++..++..+ +++.| +.++..|..
T Consensus 5 ~k~vlVT-Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~---~~~~~~D~~ 59 (245)
T 1uls_A 5 DKAVLIT-GAAHGIGRATLELFAKEGARLVACDIEEGPLREA---AEAVG---AHPVVMDVA 59 (245)
T ss_dssp TCEEEEE-STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTTT---CEEEECCTT
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHcC---CEEEEecCC
Confidence 5566644 45688888888776444 4899999998876544 33344 566777754
No 491
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=72.90 E-value=41 Score=32.42 Aligned_cols=61 Identities=25% Similarity=0.198 Sum_probs=40.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCceEEE-Ecchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTY-KLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~-~~Da~ 322 (530)
+|.+||=.+ |.|+...+++..+...| +|++++++..+...+.+..+...-..++++ ..|..
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 72 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTT
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCc
Confidence 467888555 56999999987664444 899999999887666554433211346666 56653
No 492
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=72.73 E-value=4 Score=40.83 Aligned_cols=50 Identities=24% Similarity=0.216 Sum_probs=36.0
Q ss_pred cCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 009628 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (530)
Q Consensus 257 LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~ 312 (530)
..+++|++||-.+||+ |..+.++|..++ .+|+++|++..|++.+ +++|.+
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~lGa~ 210 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELA----KELGAD 210 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHH----HHTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHH----HHCCCC
Confidence 3789999999999843 334445555443 4899999999987644 457775
No 493
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=72.64 E-value=11 Score=35.75 Aligned_cols=56 Identities=14% Similarity=0.161 Sum_probs=36.5
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
|.+||=- -|.||...++|..+... ..|+.+|++..+...+.+ + +..+.++..|...
T Consensus 2 ~k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~Dv~~ 58 (247)
T 3dii_A 2 NRGVIVT-GGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---E--RPNLFYFHGDVAD 58 (247)
T ss_dssp CCEEEEE-STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---T--CTTEEEEECCTTS
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---h--cccCCeEEeeCCC
Confidence 3445544 45688888888766433 489999999988765433 2 2346677777643
No 494
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=72.59 E-value=11 Score=36.37 Aligned_cols=59 Identities=19% Similarity=0.126 Sum_probs=39.7
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchh
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (530)
.|.+||=.+ |.||...++|..+... .+|+++|++..++..+.+.++..| .+.++..|..
T Consensus 28 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~ 87 (276)
T 2b4q_A 28 AGRIALVTG-GSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLS 87 (276)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTT
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCC
Confidence 356677555 5688888888776444 489999999988766554443333 4666667754
No 495
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=72.52 E-value=4.8 Score=44.03 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=53.5
Q ss_pred CCCCeEEEcCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCCCHHHHHHHHHhCCC
Q 009628 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALDRYKF 503 (530)
Q Consensus 424 ~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~ENE~vV~~~L~~~~~ 503 (530)
.+||.|++|..- |...+ --+.-.+|+-.-+.|-..|+.+|+|||++|.-.--+--.-.|.+|..+-++|..
T Consensus 220 ~ryDlvfvn~~t------~yr~H---HyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~ 290 (670)
T 4gua_A 220 ARYDLVFINIGT------KYRNH---HFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVR 290 (670)
T ss_dssp CCEEEEEECCCC------CCCSC---HHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEE
T ss_pred CcccEEEEecCC------Ccccc---hHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheee
Confidence 589999998642 21111 112334444444467789999999999999887777776678888888888877
Q ss_pred ceeecC
Q 009628 504 LSLAPQ 509 (530)
Q Consensus 504 ~~l~~~ 509 (530)
.++...
T Consensus 291 ~rv~~p 296 (670)
T 4gua_A 291 VSAARP 296 (670)
T ss_dssp EEEECC
T ss_pred eeeeCC
Confidence 776543
No 496
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=72.45 E-value=35 Score=32.16 Aligned_cols=51 Identities=20% Similarity=0.356 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 269 CAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 269 CAAPGgKT~~iA~lm~~~-G~VvA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.-|.||...++|..+... ..|+++|++..++..+. ++++ ..+.++..|...
T Consensus 6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~Dv~~ 57 (248)
T 3asu_A 6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK---DELG-DNLYIAQLDVRN 57 (248)
T ss_dssp TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHC-TTEEEEECCTTC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhc-CceEEEEcCCCC
Confidence 445688888888776444 48999999988776543 3444 347778888643
No 497
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=72.32 E-value=2.7 Score=42.39 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=44.7
Q ss_pred CCCCeEEEcCCCCCCCCcccchhhhhh--HHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCCCC---CHHHHHHHH
Q 009628 424 NSFDRVLLDAPCSALGLRPRLFAAEET--IQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGE---NEALVRYAL 498 (530)
Q Consensus 424 ~sFDrVLlDaPCSglG~rp~l~~~~~t--~~~l~~~~~~Qr~ll~~A~~lLkpGG~LVYSTCSi~~~E---NE~vV~~~L 498 (530)
.++|.||+|..-...|.+ .. .+..+. .+ -+++-|.+.|+|||++|-- ..... -|.++..+.
T Consensus 205 ~k~DvV~SDMApn~sGh~-------yqQC~DHari---i~-Lal~fA~~vLkPGGtfV~K---vyggaDr~se~lv~~La 270 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHH-------YQQCEDHAIK---LS-MLTKKACLHLNPGGTCVSI---GYGYADRASESIIGAIA 270 (320)
T ss_dssp CCEEEEEEECCCCCCSCH-------HHHHHHHHHH---HH-HTHHHHGGGEEEEEEEEEE---ECCCCSHHHHHHHHHHH
T ss_pred CcCCEEEEcCCCCCCCcc-------ccccchHHHH---HH-HHHHHHHHhcCCCceEEEE---EecCCcccHHHHHHHHH
Confidence 579999999765555542 11 222221 22 2899999999999999944 44444 455555555
Q ss_pred HhCCCceeec
Q 009628 499 DRYKFLSLAP 508 (530)
Q Consensus 499 ~~~~~~~l~~ 508 (530)
+.|..++.+.
T Consensus 271 R~F~~Vr~vK 280 (320)
T 2hwk_A 271 RQFKFSRVCK 280 (320)
T ss_dssp TTEEEEEEEC
T ss_pred HhcceeeeeC
Confidence 6665555553
No 498
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=72.29 E-value=35 Score=32.29 Aligned_cols=60 Identities=22% Similarity=0.133 Sum_probs=42.0
Q ss_pred CCeEEeeccCCChHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHh--CCCceEEEEcchhH
Q 009628 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALK 323 (530)
Q Consensus 262 Ge~VLDmCAAPGgKT~~iA~lm~~~G-~VvA~D~s~~kv~~i~~~a~~~--gl~~i~~~~~Da~k 323 (530)
|.+||=.+ |.||...++|..+...| +|+++|++..++..+.+...+. + ..+.++..|...
T Consensus 13 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 75 (267)
T 1iy8_A 13 DRVVLITG-GGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVSD 75 (267)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT-CCEEEEECCTTS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEccCCC
Confidence 55666555 46888888887764444 8999999998887766555544 3 246777788643
No 499
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=72.12 E-value=31 Score=33.53 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=42.3
Q ss_pred CCCeEEeeccCCChHHHHHHHHcCCC-cEEEEEeCC------------HHHHHHHHHHHHHhCCCceEEEEcchhH
Q 009628 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (530)
Q Consensus 261 pGe~VLDmCAAPGgKT~~iA~lm~~~-G~VvA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~k 323 (530)
.|.+||=-+| .||...++|..+... ..|+++|++ ..++..+.+.++..|- .+.++..|...
T Consensus 27 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGA-ARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 3556665554 577888888766444 489999987 7777777666666653 47778888654
No 500
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=72.02 E-value=3.5 Score=41.61 Aligned_cols=52 Identities=23% Similarity=0.229 Sum_probs=37.0
Q ss_pred cCCCCCCeEEeeccCC-ChHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHhCCCce
Q 009628 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314 (530)
Q Consensus 257 LdpqpGe~VLDmCAAP-GgKT~~iA~lm~~~G~VvA~D~s~~kv~~i~~~a~~~gl~~i 314 (530)
.++++|++||-.+||+ |..+.++|..++ .+|+++|+++.|++. ++++|.+.+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~----~~~lGa~~v 227 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKRED----AMKMGADHY 227 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHH----HHHHTCSEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHH----HHHcCCCEE
Confidence 5789999999999843 334445555553 379999999998754 455787643
Done!