Query 009629
Match_columns 530
No_of_seqs 192 out of 791
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 15:25:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009629.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009629hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 8E-111 2E-115 877.0 27.1 326 183-530 45-385 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 5.6E-51 1.2E-55 399.4 19.7 253 244-530 1-261 (263)
3 PF14416 PMR5N: PMR5 N termina 99.9 6.9E-27 1.5E-31 182.7 4.3 55 188-243 1-55 (55)
4 cd01842 SGNH_hydrolase_like_5 97.6 0.00024 5.1E-09 68.7 8.1 101 363-488 52-152 (183)
5 cd01834 SGNH_hydrolase_like_2 59.6 4.7 0.0001 37.1 1.3 15 258-272 1-15 (191)
6 cd01829 SGNH_hydrolase_peri2 S 54.0 9.7 0.00021 35.8 2.4 19 260-278 1-19 (200)
7 cd01820 PAF_acetylesterase_lik 48.9 13 0.00028 35.9 2.4 22 250-271 22-45 (214)
8 cd01841 NnaC_like NnaC (CMP-Ne 48.7 9 0.0002 35.2 1.3 32 403-437 72-103 (174)
9 PF00185 OTCace: Aspartate/orn 44.6 14 0.00029 34.9 1.8 25 257-282 1-25 (158)
10 cd01825 SGNH_hydrolase_peri1 S 40.3 14 0.0003 34.2 1.2 72 402-489 77-148 (189)
11 KOG2749 mRNA cleavage and poly 36.2 1.3E+02 0.0028 32.9 7.6 63 193-267 38-112 (415)
12 cd01844 SGNH_hydrolase_like_6 35.2 19 0.00041 33.5 1.2 31 403-436 75-105 (177)
13 COG2845 Uncharacterized protei 32.9 34 0.00074 36.6 2.7 26 257-282 115-140 (354)
14 cd01835 SGNH_hydrolase_like_3 32.8 20 0.00043 33.6 0.9 13 259-271 2-14 (193)
15 cd01838 Isoamyl_acetate_hydrol 32.7 20 0.00043 33.2 0.9 32 402-436 88-119 (199)
16 cd01832 SGNH_hydrolase_like_1 32.5 19 0.00042 33.2 0.8 68 403-489 89-156 (185)
17 cd01833 XynB_like SGNH_hydrola 30.1 19 0.00041 32.5 0.3 30 403-435 61-90 (157)
18 PF12026 DUF3513: Domain of un 28.7 5.5 0.00012 39.8 -3.7 39 218-271 109-147 (210)
19 cd01831 Endoglucanase_E_like E 28.7 27 0.00059 32.2 1.1 13 260-272 1-13 (169)
20 cd01827 sialate_O-acetylestera 27.9 28 0.00061 32.3 1.0 81 403-500 90-175 (188)
21 cd01822 Lysophospholipase_L1_l 26.6 30 0.00064 31.6 0.9 12 260-271 2-13 (177)
22 PRK14805 ornithine carbamoyltr 24.8 41 0.00089 35.3 1.7 26 255-282 144-169 (302)
23 PRK10528 multifunctional acyl- 24.1 40 0.00086 32.2 1.3 14 258-271 10-23 (191)
24 PF11770 GAPT: GRB2-binding ad 23.2 48 0.001 31.8 1.6 24 13-36 16-39 (158)
25 cd00229 SGNH_hydrolase SGNH_hy 23.1 30 0.00065 30.1 0.2 15 359-373 63-77 (187)
26 PF05545 FixQ: Cbb3-type cytoc 22.4 26 0.00056 26.7 -0.3 22 11-32 11-32 (49)
27 cd01836 FeeA_FeeB_like SGNH_hy 21.3 45 0.00097 31.1 1.0 31 403-436 88-118 (191)
28 cd01839 SGNH_arylesterase_like 20.8 47 0.001 31.6 1.1 33 403-435 102-136 (208)
29 cd04501 SGNH_hydrolase_like_4 20.7 45 0.00098 30.8 0.9 28 403-435 80-107 (183)
30 PF09949 DUF2183: Uncharacteri 20.6 73 0.0016 28.2 2.2 23 246-268 52-74 (100)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=7.8e-111 Score=877.03 Aligned_cols=326 Identities=31% Similarity=0.621 Sum_probs=267.1
Q ss_pred ccccCCCCCcCccCceeeCCCCCCcCCCCCchhhcccccccccCCCCcccceeeeecCCCCCCccCHHHHHHHHcCCcEE
Q 009629 183 TMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRMQDRTLA 262 (530)
Q Consensus 183 ~~~~~~~~CD~f~G~WV~D~~~PlY~~~tCp~fi~~~~nC~knGRPD~~Yl~WRWQP~~CdLPrFD~~~FLe~LRGKrLa 262 (530)
.+..+.+.||+|+|+||+|+++|||++++||.||+++|||++|||||++|++|||||++|+||||||.+||++|||||||
T Consensus 45 ~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~ 124 (387)
T PLN02629 45 SLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM 124 (387)
T ss_pred CCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence 45667889999999999999999999999986799999999999999999999999999999999999999999999999
Q ss_pred EEecchhHHHHHHHHHhhcCCCCCCCccccccccceeccCCCcCCCcceEEeccCCEEEEEEecccccccCCCCCCCCCC
Q 009629 263 FIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPAT 342 (530)
Q Consensus 263 FVGDSLaRNQ~eSLlCLL~~~~~~~~v~~~~~~~~~~~~~g~~r~~~~~~~F~~yN~TV~fyWSPFLV~~~~~~~~~~~~ 342 (530)
||||||+|||||||+|||+++++.... . +..++. ..+|+|++||+||+||||||||+.++.+ .
T Consensus 125 FVGDSL~RNQ~eSLvClL~~~~p~~~~-------~-~~~~~~----~~~~~F~~yN~TV~~ywspfLV~~~~~~-----~ 187 (387)
T PLN02629 125 FVGDSLGRNQWESLICLISSSVPSTRT-------Q-MSRGDP----LSTFKFLDYGVSISFYKAPYLVDIDAVQ-----G 187 (387)
T ss_pred EeccccchhHHHHHHHHhhccCCCCce-------e-eecCCc----eEEEEeccCCEEEEEEecceEEeeecCC-----C
Confidence 999999999999999999998764321 1 111222 2479999999999999999999975422 2
Q ss_pred ccceeeCCCchhhhhccCcccEEEEcCcccccCCcccCCeeeEEeCCccCCCcchhhhhhHHHHHHHHHHHHHHhhCCCC
Q 009629 343 EYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEH 422 (530)
Q Consensus 343 ~~~L~LD~~d~~w~~~~~~~DVLVfNTGhWW~r~~~~~~~~~~~~gg~~~~~~~~~~~~~ay~~al~Tw~~wV~~~l~~~ 422 (530)
...||||+++.. ++.|+++|||||||||||.+++.. .+|.+++.|.... ..+++..||++||+||++||++++++
T Consensus 188 ~~~l~LD~id~~-a~~w~~~DvlVfntghWw~~~~~~-~~~~~~~~g~~~~--~~~~~~~A~r~al~T~~~wv~~~~~~- 262 (387)
T PLN02629 188 KRVLKLEEISGN-ANAWRDADVLIFNTGHWWSHQGSL-QGWDYIESGGTYY--QDMDRLVALEKALRTWAYWVDTNVDR- 262 (387)
T ss_pred ceeEEecCcchh-hhhhccCCEEEEeCccccCCCCee-EEeeeeccCCccc--cCccHHHHHHHHHHHHHHHHHhcCCC-
Confidence 457999999874 788999999999999999987643 3454444333221 23456789999999999999999987
Q ss_pred CCceEEEEeccCCCcCCCCCCCCC-----CCC-ccccCCCCccccccCcchhhhhhccc--CCceEEeecccccccccCC
Q 009629 423 PRLKAFYRSISPRHFVNGDWNTGG-----SCD-NTTPMSIGKEVLQDESGDYSAGSAVK--GTGVKLLDITALSQVRDEG 494 (530)
Q Consensus 423 ~~t~VFfRT~SP~Hfe~geWn~GG-----~C~-~T~Pi~~ge~~~~~~~~~~v~~~a~~--~~~v~LLDIT~LS~lR~Dg 494 (530)
.+++|||||+||+||+||+||+|| +|+ +|+|+..+++.........+++++++ +.+|+|||||+||+|||||
T Consensus 263 ~kt~vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~Dg 342 (387)
T PLN02629 263 SRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDG 342 (387)
T ss_pred CCcEEEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCC
Confidence 478899999999999999999875 586 58999754432111111223444432 4689999999999999999
Q ss_pred CCcccccCC-------CCCCCCcccccCCChhhHHHHHHHHhC
Q 009629 495 HISQYSITA-------SRGVQDCLHWCLPGVPDTWNEILFAQL 530 (530)
Q Consensus 495 HPs~Y~~~~-------~~~~~DClHWCLPGvpDtWNeLLy~~L 530 (530)
|||+|+... +..++||+||||||||||||||||++|
T Consensus 343 HPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L 385 (387)
T PLN02629 343 HPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385 (387)
T ss_pred CcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHH
Confidence 999996431 235689999999999999999999986
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=5.6e-51 Score=399.39 Aligned_cols=253 Identities=35% Similarity=0.612 Sum_probs=187.8
Q ss_pred CCccCHHHHHHHHcCCcEEEEecchhHHHHHHHHHhhcCCCCCCCccccccccceeccCCCcCCCcceEEeccCCEEEEE
Q 009629 244 MEEFEGSQFLTRMQDRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILY 323 (530)
Q Consensus 244 LPrFD~~~FLe~LRGKrLaFVGDSLaRNQ~eSLlCLL~~~~~~~~v~~~~~~~~~~~~~g~~r~~~~~~~F~~yN~TV~f 323 (530)
|++||+.++|++||||+|+|||||++||||+||+|+|.+....... .........++ ....+.|+++|+||+|
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~f 73 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQE---SPHSGIEFPNH----RNFRYNFPDYNVTLSF 73 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhcccccccc---ccccccccccC----CceEEeecCCCeEEEE
Confidence 6899999999999999999999999999999999999987652110 00000000011 1246788999999999
Q ss_pred EecccccccCCCCCCCCCCccceeeCCCchhhhhccC----cccEEEEcCcccccCCcccCCeeeEEeCCccCCCcchhh
Q 009629 324 YWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLH----KFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIAD 399 (530)
Q Consensus 324 yWSPFLV~~~~~~~~~~~~~~~L~LD~~d~~w~~~~~----~~DVLVfNTGhWW~r~~~~~~~~~~~~gg~~~~~~~~~~ 399 (530)
+|+|||++. +|.++..+...+. ..||||||+|+||.+.+... .++.. ....
T Consensus 74 ~~~p~l~~~---------------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~------~~~~~----~~~~ 128 (263)
T PF13839_consen 74 YWDPFLVDQ---------------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFI------EWGDN----KEIN 128 (263)
T ss_pred ecccccccc---------------ccccchhhhccccccccCCCEEEEEcchhhhhcchhc------ccCCC----cCcc
Confidence 999999963 3433333334444 89999999999998765321 11111 1223
Q ss_pred hhhHHHHHHHHHHHHHHhhCCCC-CCceEEEEeccCCCcCCCCCCCCCCCCccccCCCCccccccCcchhhhhhcc-cCC
Q 009629 400 IAGAKNFTIHSIVSWVNSQLPEH-PRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAV-KGT 477 (530)
Q Consensus 400 ~~~ay~~al~Tw~~wV~~~l~~~-~~t~VFfRT~SP~Hfe~geWn~GG~C~~T~Pi~~ge~~~~~~~~~~v~~~a~-~~~ 477 (530)
...+|+..++++++|+.+.++.. ++++||||+++|+||++++|++||.|.....-.-.... ....+.++.++. ++.
T Consensus 129 ~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~~~~~~~gg~c~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 206 (263)
T PF13839_consen 129 PLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFEGGDWNSGGSCNPPRREEITNEQ--IDELNEALREALKKNS 206 (263)
T ss_pred hHHHHHHHHHHHHHHHHhhhccccccceEEEEecCCccccccccccCCCcCcccccCCCHHH--HHHHHHHHHHHhhcCC
Confidence 46789999999999999888654 35899999999999999999999999921110000000 011223344444 678
Q ss_pred ceEEeec-cccccccc-CCCCcccccCCCCCCCCcccccCCChhhHHHHHHHHhC
Q 009629 478 GVKLLDI-TALSQVRD-EGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL 530 (530)
Q Consensus 478 ~v~LLDI-T~LS~lR~-DgHPs~Y~~~~~~~~~DClHWCLPGvpDtWNeLLy~~L 530 (530)
++++||| |.|+.+|+ |||||+|+........||+|||+|||+|+||+|||++|
T Consensus 207 ~~~~ldi~~~~~~~r~~d~H~~~~~~~~~~~~~Dc~Hw~~p~v~d~~~~lL~~~l 261 (263)
T PF13839_consen 207 RVHLLDIFTMLSSFRPDDAHPGIYRNQWPRQPQDCLHWCLPGVIDTWNELLLNLL 261 (263)
T ss_pred CceeeeecchhhhccccccCcccccCCCCCCCCCCcCcCCCcHHHHHHHHHHHHh
Confidence 9999999 99999999 99999998876666799999999999999999999986
No 3
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.93 E-value=6.9e-27 Score=182.72 Aligned_cols=55 Identities=36% Similarity=0.956 Sum_probs=53.2
Q ss_pred CCCCcCccCceeeCCCCCCcCCCCCchhhcccccccccCCCCcccceeeeecCCCC
Q 009629 188 NQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQ 243 (530)
Q Consensus 188 ~~~CD~f~G~WV~D~~~PlY~~~tCp~fi~~~~nC~knGRPD~~Yl~WRWQP~~Cd 243 (530)
++.||+|+|+||+|+++|||++++|| ||+++|||++|||||++|++|||||++|+
T Consensus 1 e~~Cd~~~G~WV~D~~~PlY~~~~Cp-~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 1 EKRCDYFDGRWVPDPSYPLYTNSTCP-FIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CCccCcccCEEEeCCCCCccCCCCCC-cCCCccchhhcCCCCCccceeeecCCCCC
Confidence 36899999999999999999999999 99999999999999999999999999996
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.58 E-value=0.00024 Score=68.68 Aligned_cols=101 Identities=14% Similarity=0.054 Sum_probs=57.2
Q ss_pred cEEEEcCcccccCCcccCCeeeEEeCCccCCCcchhhhhhHHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCCcCCCCC
Q 009629 363 DVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDW 442 (530)
Q Consensus 363 DVLVfNTGhWW~r~~~~~~~~~~~~gg~~~~~~~~~~~~~ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~Hfe~geW 442 (530)
||||||+|.|=. .+ .+.. ....|+.-|.+.+.-+.+-+++ .++++|.|++|-=-+
T Consensus 52 DVIi~Ns~LWDl---------~r-y~~~---------~~~~Y~~NL~~Lf~rLk~~lp~--~allIW~tt~Pv~~~---- 106 (183)
T cd01842 52 DLVIMNSCLWDL---------SR-YQRN---------SMKTYRENLERLFSKLDSVLPI--ECLIVWNTAMPVAEE---- 106 (183)
T ss_pred eEEEEecceecc---------cc-cCCC---------CHHHHHHHHHHHHHHHHhhCCC--ccEEEEecCCCCCcC----
Confidence 999999999821 11 1111 1245787888888777766654 578999999996211
Q ss_pred CCCCCCCccccCCCCccccccCcchhhhhhcccCCceEEeeccccc
Q 009629 443 NTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALS 488 (530)
Q Consensus 443 n~GG~C~~T~Pi~~ge~~~~~~~~~~v~~~a~~~~~v~LLDIT~LS 488 (530)
-+||-=.-..+....+-.......+..+.++++...|.+||+-.-.
T Consensus 107 ~~ggfl~~~~~~~~~~lr~dv~eaN~~A~~va~~~~~dVlDLh~~f 152 (183)
T cd01842 107 IKGGFLLPELHDLSKSLRYDVLEGNFYSATLAKCYGFDVLDLHYHF 152 (183)
T ss_pred CcCceeccccccccccchhHHHHHHHHHHHHHHHcCceeeehHHHH
Confidence 1222110000000000011112344555666667789999998776
No 5
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=59.56 E-value=4.7 Score=37.14 Aligned_cols=15 Identities=27% Similarity=0.587 Sum_probs=13.8
Q ss_pred CCcEEEEecchhHHH
Q 009629 258 DRTLAFIGDSLGRQQ 272 (530)
Q Consensus 258 GKrLaFVGDSLaRNQ 272 (530)
|++|+|+|||++...
T Consensus 1 ~~~v~~~GDSit~g~ 15 (191)
T cd01834 1 GDRIVFIGNSITDRG 15 (191)
T ss_pred CCEEEEeCCChhhcc
Confidence 789999999999976
No 6
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=53.99 E-value=9.7 Score=35.81 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=15.5
Q ss_pred cEEEEecchhHHHHHHHHH
Q 009629 260 TLAFIGDSLGRQQFQSLMC 278 (530)
Q Consensus 260 rLaFVGDSLaRNQ~eSLlC 278 (530)
||+|+|||++...+-+|.-
T Consensus 1 ril~iGDS~~~g~~~~l~~ 19 (200)
T cd01829 1 RVLVIGDSLAQGLAPGLLR 19 (200)
T ss_pred CEEEEechHHHHHHHHHHH
Confidence 6899999999987766653
No 7
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=48.93 E-value=13 Score=35.95 Aligned_cols=22 Identities=27% Similarity=0.700 Sum_probs=16.6
Q ss_pred HHHHHHHcCC--cEEEEecchhHH
Q 009629 250 SQFLTRMQDR--TLAFIGDSLGRQ 271 (530)
Q Consensus 250 ~~FLe~LRGK--rLaFVGDSLaRN 271 (530)
.+|++..+.+ +|+|+||||+..
T Consensus 22 ~~~~~~~~~~~~~iv~lGDSit~g 45 (214)
T cd01820 22 ERFVAEAKQKEPDVVFIGDSITQN 45 (214)
T ss_pred HHHHHHhhcCCCCEEEECchHhhh
Confidence 4566655444 899999999885
No 8
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=48.68 E-value=9 Score=35.25 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCCc
Q 009629 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHF 437 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~Hf 437 (530)
.|...++++++-+.++. ++++|++-++.|...
T Consensus 72 ~~~~~~~~l~~~~~~~~---p~~~vi~~~~~p~~~ 103 (174)
T cd01841 72 QFIKWYRDIIEQIREEF---PNTKIYLLSVLPVLE 103 (174)
T ss_pred HHHHHHHHHHHHHHHHC---CCCEEEEEeeCCcCc
Confidence 35556677776665532 457899999887654
No 9
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=44.58 E-value=14 Score=34.93 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=21.2
Q ss_pred cCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 257 QDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 257 RGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
.|++|+|||| ..-|.-.||+.+|..
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4899999999 656789999999864
No 10
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=40.34 E-value=14 Score=34.17 Aligned_cols=72 Identities=13% Similarity=0.103 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCCcCCCCCCCCCCCCccccCCCCccccccCcchhhhhhcccCCceEE
Q 009629 402 GAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKL 481 (530)
Q Consensus 402 ~ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~Hfe~geWn~GG~C~~T~Pi~~ge~~~~~~~~~~v~~~a~~~~~v~L 481 (530)
..|...|+..++.+.+.. ++++|++.+..|.-+... +.+....+ . ....+....++.+...+.+
T Consensus 77 ~~~~~~~~~li~~i~~~~---~~~~iv~~~~~~~~~~~~-----~~~~~~~~-----~---~~~~~~~~~~~a~~~~v~~ 140 (189)
T cd01825 77 SEYRQQLREFIKRLRQIL---PNASILLVGPPDSLQKTG-----AGRWRTPP-----G---LDAVIAAQRRVAKEEGIAF 140 (189)
T ss_pred HHHHHHHHHHHHHHHHHC---CCCeEEEEcCCchhccCC-----CCCcccCC-----c---HHHHHHHHHHHHHHcCCeE
Confidence 346667777777775532 457899998876533211 11111100 0 0111222334444556999
Q ss_pred eecccccc
Q 009629 482 LDITALSQ 489 (530)
Q Consensus 482 LDIT~LS~ 489 (530)
+|+...+.
T Consensus 141 vd~~~~~~ 148 (189)
T cd01825 141 WDLYAAMG 148 (189)
T ss_pred EeHHHHhC
Confidence 99987754
No 11
>KOG2749 consensus mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1 [RNA processing and modification]
Probab=36.22 E-value=1.3e+02 Score=32.92 Aligned_cols=63 Identities=14% Similarity=0.237 Sum_probs=39.8
Q ss_pred CccCceeeCCC---CCCcCCCCCchhhcccccccccCCCCcccceeeeecCCCCCCccCHHHHHHHHc---------CCc
Q 009629 193 YAKGKWVVDDS---RPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRMQ---------DRT 260 (530)
Q Consensus 193 ~f~G~WV~D~~---~PlY~~~tCp~fi~~~~nC~knGRPD~~Yl~WRWQP~~CdLPrFD~~~FLe~LR---------GKr 260 (530)
+..++|--=+. .-.|+-..|- |. .-|++|.+|.+ +.-=..--+|-..+||.+| |.|
T Consensus 38 L~~~~~ytF~~~~k~aifTw~Gct--le------v~G~t~~~YVs----~eTpM~~ylNlH~ale~~R~~~e~~~~~GPr 105 (415)
T KOG2749|consen 38 LALEKWYTFPNGMKVAIFTWQGCT--LE------VEGTTEVEYVS----DETPMVLYLNLHAALEKRRMQAEEESSYGPR 105 (415)
T ss_pred cccCCceecCCCceEEEEEEeccE--EE------EeccccceEec----CCCChhhhhhHHHHHHHHhhhhhhhhccCCE
Confidence 34566663222 2356777886 32 23999999975 1111222377788888776 899
Q ss_pred EEEEecc
Q 009629 261 LAFIGDS 267 (530)
Q Consensus 261 LaFVGDS 267 (530)
+|.||++
T Consensus 106 v~vVGp~ 112 (415)
T KOG2749|consen 106 VMVVGPT 112 (415)
T ss_pred EEEECCC
Confidence 9999964
No 12
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=35.23 E-value=19 Score=33.52 Aligned_cols=31 Identities=10% Similarity=-0.041 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCC
Q 009629 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRH 436 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~H 436 (530)
.|...++.+++.|.++. +.+.|++.+..|..
T Consensus 75 ~~~~~~~~~i~~i~~~~---p~~~iil~~~~~~~ 105 (177)
T cd01844 75 MVRERLGPLVKGLRETH---PDTPILLVSPRYCP 105 (177)
T ss_pred HHHHHHHHHHHHHHHHC---cCCCEEEEecCCCC
Confidence 35566778888887654 34678888766543
No 13
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.92 E-value=34 Score=36.58 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=22.3
Q ss_pred cCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 257 QDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 257 RGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
-++++.||||||++..-+-|.--|.+
T Consensus 115 ~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 115 DADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred CCCEEEEechHHhhhhHHHHHHHhcc
Confidence 46799999999999988888877765
No 14
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.81 E-value=20 Score=33.62 Aligned_cols=13 Identities=38% Similarity=0.521 Sum_probs=11.4
Q ss_pred CcEEEEecchhHH
Q 009629 259 RTLAFIGDSLGRQ 271 (530)
Q Consensus 259 KrLaFVGDSLaRN 271 (530)
++|+|+|||++..
T Consensus 2 ~~i~~lGDSit~G 14 (193)
T cd01835 2 KRLIVVGDSLVYG 14 (193)
T ss_pred cEEEEEcCccccC
Confidence 6899999999874
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=32.69 E-value=20 Score=33.18 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCC
Q 009629 402 GAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRH 436 (530)
Q Consensus 402 ~ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~H 436 (530)
..|...++.+++.+.+.. ++++|++-|..|..
T Consensus 88 ~~~~~~~~~~i~~~~~~~---~~~~ii~~t~~~~~ 119 (199)
T cd01838 88 DEYKENLRKIVSHLKSLS---PKTKVILITPPPVD 119 (199)
T ss_pred HHHHHHHHHHHHHHHhhC---CCCeEEEeCCCCCC
Confidence 356666777777765532 45789999887754
No 16
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=32.53 E-value=19 Score=33.22 Aligned_cols=68 Identities=7% Similarity=0.010 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCCcCCCCCCCCCCCCccccCCCCccccccCcchhhhhhcccCCceEEe
Q 009629 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLL 482 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~Hfe~geWn~GG~C~~T~Pi~~ge~~~~~~~~~~v~~~a~~~~~v~LL 482 (530)
.|...++.+++.+. . ++++|++-+..|... ..|+.... .-.....+..+.++.+...+.++
T Consensus 89 ~~~~~~~~~i~~i~---~--~~~~vil~~~~~~~~-------------~~~~~~~~-~~~~~~~n~~l~~~a~~~~v~~v 149 (185)
T cd01832 89 TYRADLEEAVRRLR---A--AGARVVVFTIPDPAV-------------LEPFRRRV-RARLAAYNAVIRAVAARYGAVHV 149 (185)
T ss_pred HHHHHHHHHHHHHH---h--CCCEEEEecCCCccc-------------cchhHHHH-HHHHHHHHHHHHHHHHHcCCEEE
Confidence 45556666666664 1 356788887655400 11221100 00001122233444445679999
Q ss_pred ecccccc
Q 009629 483 DITALSQ 489 (530)
Q Consensus 483 DIT~LS~ 489 (530)
|+..+..
T Consensus 150 d~~~~~~ 156 (185)
T cd01832 150 DLWEHPE 156 (185)
T ss_pred ecccCcc
Confidence 9988764
No 17
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.14 E-value=19 Score=32.50 Aligned_cols=30 Identities=10% Similarity=0.260 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCC
Q 009629 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPR 435 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~ 435 (530)
.|...++++.+.+.+.. +++++++-++.|.
T Consensus 61 ~~~~~~~~~i~~i~~~~---p~~~ii~~~~~p~ 90 (157)
T cd01833 61 TAPDRLRALIDQMRAAN---PDVKIIVATLIPT 90 (157)
T ss_pred HHHHHHHHHHHHHHHhC---CCeEEEEEeCCCC
Confidence 45666777777775542 4567888777653
No 18
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=28.71 E-value=5.5 Score=39.84 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=25.1
Q ss_pred ccccccccCCCCcccceeeeecCCCCCCccCHHHHHHHHcCCcEEEEecchhHH
Q 009629 218 QMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRMQDRTLAFIGDSLGRQ 271 (530)
Q Consensus 218 ~~~nC~knGRPD~~Yl~WRWQP~~CdLPrFD~~~FLe~LRGKrLaFVGDSLaRN 271 (530)
.-+.|..++-|-.-|. +..=+-.|-|.+|+||||+|.|+
T Consensus 109 ~F~~sv~~nQPP~iFv---------------~~sK~VIl~ahkLVfiGDTl~r~ 147 (210)
T PF12026_consen 109 AFFSSVSNNQPPKIFV---------------AHSKFVILSAHKLVFIGDTLCRE 147 (210)
T ss_dssp HHHHHHHTT--HHHHH---------------HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcccCCCcchhh---------------hcCcEEEEEeeeeeeeccHHHHH
Confidence 3356666666643332 33344568889999999999986
No 19
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=28.66 E-value=27 Score=32.23 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=10.7
Q ss_pred cEEEEecchhHHH
Q 009629 260 TLAFIGDSLGRQQ 272 (530)
Q Consensus 260 rLaFVGDSLaRNQ 272 (530)
+|+|+|||++...
T Consensus 1 ~i~~iGDSit~G~ 13 (169)
T cd01831 1 KIEFIGDSITCGY 13 (169)
T ss_pred CEEEEeccccccC
Confidence 5899999998753
No 20
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.93 E-value=28 Score=32.32 Aligned_cols=81 Identities=10% Similarity=0.043 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCCcCCCCCCCCCCCCccccCCCCccccccCcchhhhhhcccCCceEEe
Q 009629 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLL 482 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~Hfe~geWn~GG~C~~T~Pi~~ge~~~~~~~~~~v~~~a~~~~~v~LL 482 (530)
.|+..++.+.+.+.+.- +.+++++.+..|.... .+. ++.. ..... .....+.++.+...+.++
T Consensus 90 ~~~~~l~~li~~i~~~~---~~~~iil~t~~p~~~~--~~~---------~~~~-~~~~~--~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 90 DFKKDYETMIDSFQALP---SKPKIYICYPIPAYYG--DGG---------FIND-NIIKK--EIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHHHHHHC---CCCeEEEEeCCccccc--CCC---------ccch-HHHHH--HHHHHHHHHHHHcCCcEE
Confidence 45666777777765432 3467888887775432 111 1100 00000 011122233334578888
Q ss_pred ecccccc----cccCC-CCcccc
Q 009629 483 DITALSQ----VRDEG-HISQYS 500 (530)
Q Consensus 483 DIT~LS~----lR~Dg-HPs~Y~ 500 (530)
|+..... +-+|| ||+..+
T Consensus 153 D~~~~~~~~~~~~~Dg~Hpn~~G 175 (188)
T cd01827 153 DLHTPLKGKPELVPDWVHPNEKG 175 (188)
T ss_pred EccccccCCccccCCCCCcCHHH
Confidence 8776543 34587 887643
No 21
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=26.63 E-value=30 Score=31.60 Aligned_cols=12 Identities=42% Similarity=0.540 Sum_probs=10.1
Q ss_pred cEEEEecchhHH
Q 009629 260 TLAFIGDSLGRQ 271 (530)
Q Consensus 260 rLaFVGDSLaRN 271 (530)
+|+|+|||++..
T Consensus 2 ~i~~~GDSit~G 13 (177)
T cd01822 2 TILALGDSLTAG 13 (177)
T ss_pred eEEEEccccccC
Confidence 699999999754
No 22
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=24.75 E-value=41 Score=35.28 Aligned_cols=26 Identities=27% Similarity=0.355 Sum_probs=21.2
Q ss_pred HHcCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 255 RMQDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 255 ~LRGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
.+.|++|+||||. .|...||+.+|..
T Consensus 144 ~l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 144 DVSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred CcCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 3688999999994 5788999998854
No 23
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=24.06 E-value=40 Score=32.15 Aligned_cols=14 Identities=43% Similarity=0.591 Sum_probs=12.2
Q ss_pred CCcEEEEecchhHH
Q 009629 258 DRTLAFIGDSLGRQ 271 (530)
Q Consensus 258 GKrLaFVGDSLaRN 271 (530)
+.+|+|+|||++..
T Consensus 10 ~~~iv~~GDSit~G 23 (191)
T PRK10528 10 ADTLLILGDSLSAG 23 (191)
T ss_pred CCEEEEEeCchhhc
Confidence 66899999999865
No 24
>PF11770 GAPT: GRB2-binding adapter (GAPT); InterPro: IPR021082 This entry represents a family of transmembrane proteins which bind the growth factor receptor-bound protein 2 (GRB2) in B cells []. In contrast to other transmembrane adaptor proteins, GAPT, which this entry represents, is not phosphorylated upon BCR ligation. It associates with GRB2 constitutively through its proline-rich region [].
Probab=23.24 E-value=48 Score=31.75 Aligned_cols=24 Identities=33% Similarity=0.809 Sum_probs=20.3
Q ss_pred chhhhhHHHhhheeeeeccCCccc
Q 009629 13 LSLILIVLVCTTIFVWTWDRTPFL 36 (530)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~ 36 (530)
|+|.||+|+|..-.+|-|.+....
T Consensus 16 i~Ll~lLl~cgiGcvwhwkhr~~~ 39 (158)
T PF11770_consen 16 ISLLLLLLLCGIGCVWHWKHRDST 39 (158)
T ss_pred HHHHHHHHHHhcceEEEeeccCcc
Confidence 678888999999999999886644
No 25
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=23.06 E-value=30 Score=30.14 Aligned_cols=15 Identities=20% Similarity=0.308 Sum_probs=11.9
Q ss_pred cCcccEEEEcCcccc
Q 009629 359 LHKFDVLVLNTGHHW 373 (530)
Q Consensus 359 ~~~~DVLVfNTGhWW 373 (530)
....|+||+..|..-
T Consensus 63 ~~~~d~vil~~G~ND 77 (187)
T cd00229 63 KDKPDLVIIELGTND 77 (187)
T ss_pred cCCCCEEEEEecccc
Confidence 457899999999753
No 26
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.37 E-value=26 Score=26.74 Aligned_cols=22 Identities=14% Similarity=0.566 Sum_probs=17.7
Q ss_pred ccchhhhhHHHhhheeeeeccC
Q 009629 11 KELSLILIVLVCTTIFVWTWDR 32 (530)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~ 32 (530)
+-++++++++++..|++|+|-+
T Consensus 11 ~~~~~v~~~~~F~gi~~w~~~~ 32 (49)
T PF05545_consen 11 RSIGTVLFFVFFIGIVIWAYRP 32 (49)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 4577888888899999998853
No 27
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.30 E-value=45 Score=31.10 Aligned_cols=31 Identities=10% Similarity=0.222 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCCC
Q 009629 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRH 436 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~H 436 (530)
.|...++.+++-+.++. ++++||+-+..|..
T Consensus 88 ~~~~~l~~li~~i~~~~---~~~~iiv~~~p~~~ 118 (191)
T cd01836 88 RWRKQLAELVDALRAKF---PGARVVVTAVPPLG 118 (191)
T ss_pred HHHHHHHHHHHHHHhhC---CCCEEEEECCCCcc
Confidence 45666777777776542 45788988876543
No 28
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=20.76 E-value=47 Score=31.59 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhhCC--CCCCceEEEEeccCC
Q 009629 403 AKNFTIHSIVSWVNSQLP--EHPRLKAFYRSISPR 435 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~--~~~~t~VFfRT~SP~ 435 (530)
.|+..++.+++-|.+... ..+.++|++-+..|.
T Consensus 102 ~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~ 136 (208)
T cd01839 102 EIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI 136 (208)
T ss_pred HHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc
Confidence 456667777776654321 013567888776654
No 29
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=20.67 E-value=45 Score=30.82 Aligned_cols=28 Identities=21% Similarity=0.192 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEeccCC
Q 009629 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPR 435 (530)
Q Consensus 403 ay~~al~Tw~~wV~~~l~~~~~t~VFfRT~SP~ 435 (530)
.|...++..++.+.+ .+.++++.+..|.
T Consensus 80 ~~~~~~~~li~~~~~-----~~~~~il~~~~p~ 107 (183)
T cd04501 80 MIKDNIRSMVELAEA-----NGIKVILASPLPV 107 (183)
T ss_pred HHHHHHHHHHHHHHH-----CCCcEEEEeCCCc
Confidence 455567777776643 2346788776663
No 30
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.63 E-value=73 Score=28.16 Aligned_cols=23 Identities=26% Similarity=0.345 Sum_probs=18.2
Q ss_pred ccCHHHHHHHHcCCcEEEEecch
Q 009629 246 EFEGSQFLTRMQDRTLAFIGDSL 268 (530)
Q Consensus 246 rFD~~~FLe~LRGKrLaFVGDSL 268 (530)
+-.-+.+++..-+++.++||||=
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsg 74 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSG 74 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCC
Confidence 33445788888999999999993
Done!