Query 009629
Match_columns 530
No_of_seqs 192 out of 791
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 09:29:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009629.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009629hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3bzwa1 c.23.10.9 (A:38-285) U 81.0 0.25 1.8E-05 41.6 1.5 14 257-270 7-20 (248)
2 d3dc7a1 c.23.10.9 (A:18-224) U 79.5 0.25 1.8E-05 42.1 1.1 15 257-271 3-17 (207)
3 d1pvva2 c.78.1.1 (A:151-313) O 69.5 0.8 5.8E-05 39.6 1.7 25 256-282 2-26 (163)
4 d1otha2 c.78.1.1 (A:185-354) O 65.5 1 7.4E-05 38.9 1.5 24 256-281 2-25 (170)
5 d1vjga_ c.23.10.6 (A:) Hypothe 60.2 1.3 9.7E-05 36.9 1.3 12 260-271 6-17 (201)
6 d2o14a2 c.23.10.8 (A:160-367) 57.6 1.5 0.00011 37.6 1.2 16 256-271 1-16 (208)
7 d1vlva2 c.78.1.1 (A:153-313) O 57.0 2.1 0.00015 36.4 2.0 26 256-282 1-26 (161)
8 d1dxha2 c.78.1.1 (A:151-335) O 52.0 2.9 0.00021 36.6 2.2 26 256-282 3-28 (185)
9 d1yzfa1 c.23.10.5 (A:1-195) Li 50.1 2.2 0.00016 36.2 0.9 12 259-270 2-13 (195)
10 d1fxwf_ c.23.10.3 (F:) Platele 43.9 4.5 0.00033 35.3 2.1 21 251-271 25-47 (212)
11 d1es9a_ c.23.10.3 (A:) Platele 43.2 4.7 0.00034 35.1 2.1 20 251-270 25-46 (212)
12 d1pg5a2 c.78.1.1 (A:147-299) A 41.5 5.7 0.00041 33.5 2.3 27 256-282 1-27 (153)
13 d2at2a2 c.78.1.1 (A:145-295) A 39.8 6.1 0.00045 33.4 2.2 26 257-282 2-27 (151)
14 d1ekxa2 c.78.1.1 (A:151-310) A 39.3 5.1 0.00037 33.8 1.6 27 255-281 1-27 (160)
15 d1jrla_ c.23.10.5 (A:) Thioest 37.9 5.9 0.00043 32.9 1.8 12 260-271 3-14 (179)
16 d1ml4a2 c.78.1.1 (A:152-308) A 35.8 5.3 0.00038 33.5 1.1 28 255-282 1-28 (157)
17 d2hsja1 c.23.10.3 (A:1-211) Un 30.3 9.3 0.00068 32.9 1.8 28 407-437 107-134 (211)
18 d1k7ca_ c.23.10.4 (A:) Rhamnog 22.9 12 0.00086 31.5 1.1 27 475-501 160-201 (233)
19 d1duvg2 c.78.1.1 (G:151-333) O 20.0 22 0.0016 30.3 2.3 25 256-281 3-27 (183)
No 1
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=80.97 E-value=0.25 Score=41.60 Aligned_cols=14 Identities=36% Similarity=0.760 Sum_probs=12.6
Q ss_pred cCCcEEEEecchhH
Q 009629 257 QDRTLAFIGDSLGR 270 (530)
Q Consensus 257 RGKrLaFVGDSLaR 270 (530)
.||+|+|+|||++-
T Consensus 7 ~~kkI~~~GDS~T~ 20 (248)
T d3bzwa1 7 QGKKVGYIGDSITD 20 (248)
T ss_dssp TTCEEEEEESTTTC
T ss_pred CCCEEEEEehHHcc
Confidence 68999999999884
No 2
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}
Probab=79.53 E-value=0.25 Score=42.10 Aligned_cols=15 Identities=27% Similarity=0.445 Sum_probs=12.6
Q ss_pred cCCcEEEEecchhHH
Q 009629 257 QDRTLAFIGDSLGRQ 271 (530)
Q Consensus 257 RGKrLaFVGDSLaRN 271 (530)
-.|||+|+|||++-+
T Consensus 3 ~~kri~~iGDSit~g 17 (207)
T d3dc7a1 3 SFKRPAWLGDSITAN 17 (207)
T ss_dssp CCSSEEEEESTTTST
T ss_pred CCCEEEEEehHhhcC
Confidence 478999999999843
No 3
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=69.52 E-value=0.8 Score=39.59 Aligned_cols=25 Identities=28% Similarity=0.473 Sum_probs=21.1
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 256 MQDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 256 LRGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
+.|++|+|||| .+|...||+-+|..
T Consensus 2 l~gl~Ia~VGD--~~nv~~Sli~~l~~ 26 (163)
T d1pvva2 2 IKGVKVVYVGD--GNNVAHSLMIAGTK 26 (163)
T ss_dssp CTTCEEEEESC--CCHHHHHHHHHHHH
T ss_pred cCCCEEEEECC--CcHHHHHHHHHHHH
Confidence 57999999999 57888999987753
No 4
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.45 E-value=1 Score=38.87 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=19.8
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhc
Q 009629 256 MQDRTLAFIGDSLGRQQFQSLMCMVT 281 (530)
Q Consensus 256 LRGKrLaFVGDSLaRNQ~eSLlCLL~ 281 (530)
+.|++|+|||| + +|-..||+-++.
T Consensus 2 l~gl~I~~vGD-~-~nV~~Sli~~~~ 25 (170)
T d1otha2 2 LKGLTLSWIGD-G-NNILHSIMMSAA 25 (170)
T ss_dssp CTTCEEEEESC-S-SHHHHHHHTTTG
T ss_pred CCCCEEEEEcC-c-hhHHHHHHHHHH
Confidence 57999999999 3 678889987664
No 5
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}
Probab=60.20 E-value=1.3 Score=36.85 Aligned_cols=12 Identities=33% Similarity=0.686 Sum_probs=10.5
Q ss_pred cEEEEecchhHH
Q 009629 260 TLAFIGDSLGRQ 271 (530)
Q Consensus 260 rLaFVGDSLaRN 271 (530)
||+|||||++-.
T Consensus 6 ri~~iGDS~t~G 17 (201)
T d1vjga_ 6 RICFVGDSFVNG 17 (201)
T ss_dssp EEEEEESHHHHT
T ss_pred EEEEEchhhccC
Confidence 799999999863
No 6
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=57.64 E-value=1.5 Score=37.60 Aligned_cols=16 Identities=31% Similarity=0.306 Sum_probs=13.7
Q ss_pred HcCCcEEEEecchhHH
Q 009629 256 MQDRTLAFIGDSLGRQ 271 (530)
Q Consensus 256 LRGKrLaFVGDSLaRN 271 (530)
++||+|.++|||++-+
T Consensus 1 ~~~~ti~~~GDS~~~g 16 (208)
T d2o14a2 1 VTNRTIYVGGDSTVCN 16 (208)
T ss_dssp CCCCEEEEEECTTTSC
T ss_pred CCCCEEEEEEcccccC
Confidence 5799999999998843
No 7
>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}
Probab=56.98 E-value=2.1 Score=36.44 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=20.5
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 256 MQDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 256 LRGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
|+|++|+|||| +.-|-..||+=+++.
T Consensus 1 l~g~ki~~vGD-~~nnV~~Sli~~~~~ 26 (161)
T d1vlva2 1 LKGVKVVFMGD-TRNNVATSLMIACAK 26 (161)
T ss_dssp STTCEEEEESC-TTSHHHHHHHHHHHH
T ss_pred CCCCEEEEEcC-CccHHHHHHHHHHHH
Confidence 57999999999 523688899887753
No 8
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=52.02 E-value=2.9 Score=36.58 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=22.0
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 256 MQDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 256 LRGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
|.|.+|+||||.-+ |...||+-++..
T Consensus 3 l~~lkia~vGD~~n-nV~~Sli~~~~~ 28 (185)
T d1dxha2 3 LHDISYAYLGDARN-NMGNSLLLIGAK 28 (185)
T ss_dssp GGGCEEEEESCCSS-HHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcc-hHHHHHHHHHHH
Confidence 67899999999756 699999988864
No 9
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=50.13 E-value=2.2 Score=36.19 Aligned_cols=12 Identities=33% Similarity=0.703 Sum_probs=10.6
Q ss_pred CcEEEEecchhH
Q 009629 259 RTLAFIGDSLGR 270 (530)
Q Consensus 259 KrLaFVGDSLaR 270 (530)
|||+|+|||++.
T Consensus 2 kri~~~GDSit~ 13 (195)
T d1yzfa1 2 RKIVLFGDSITA 13 (195)
T ss_dssp EEEEEEESHHHH
T ss_pred CEEEEEechhhc
Confidence 589999999975
No 10
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]}
Probab=43.89 E-value=4.5 Score=35.26 Aligned_cols=21 Identities=29% Similarity=0.640 Sum_probs=15.4
Q ss_pred HHHHHHcCC--cEEEEecchhHH
Q 009629 251 QFLTRMQDR--TLAFIGDSLGRQ 271 (530)
Q Consensus 251 ~FLe~LRGK--rLaFVGDSLaRN 271 (530)
.|+...+.| +|+|+||||...
T Consensus 25 ~~~~~~~~~~~~vvf~GDSit~g 47 (212)
T d1fxwf_ 25 RFVLDCKDKEPDVLFVGDSMVQL 47 (212)
T ss_dssp HHHHHHHHCCCSEEEEESHHHHG
T ss_pred HHHHHhccCCCCEEEEeChHHhC
Confidence 455555554 699999999864
No 11
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]}
Probab=43.18 E-value=4.7 Score=35.07 Aligned_cols=20 Identities=40% Similarity=0.777 Sum_probs=15.0
Q ss_pred HHHHHHcCC--cEEEEecchhH
Q 009629 251 QFLTRMQDR--TLAFIGDSLGR 270 (530)
Q Consensus 251 ~FLe~LRGK--rLaFVGDSLaR 270 (530)
.|++.-++| .|+|+||||.+
T Consensus 25 ~~~~~~~~~~~~vv~iGDSit~ 46 (212)
T d1es9a_ 25 RFVADSKDKEPEVVFIGDSLVQ 46 (212)
T ss_dssp HHHHHHHHCCCSEEEEESHHHH
T ss_pred HHHHHhccCCCcEEEEeCChhh
Confidence 555555444 79999999986
No 12
>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=41.48 E-value=5.7 Score=33.46 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=21.9
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 256 MQDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 256 LRGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
|.|++|+||||-..-+-..||+=+|..
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~ 27 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTR 27 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHH
Confidence 469999999998765578899888753
No 13
>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}
Probab=39.78 E-value=6.1 Score=33.44 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=22.6
Q ss_pred cCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 257 QDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 257 RGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
.|.+|+||||...-|-..||+=+|..
T Consensus 2 ~gl~i~~vGD~~~srv~~Sl~~~~~~ 27 (151)
T d2at2a2 2 KGLTVSIHGDIKHSRVARSNAEVLTR 27 (151)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 58999999999887789999988864
No 14
>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}
Probab=39.34 E-value=5.1 Score=33.84 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=21.2
Q ss_pred HHcCCcEEEEecchhHHHHHHHHHhhc
Q 009629 255 RMQDRTLAFIGDSLGRQQFQSLMCMVT 281 (530)
Q Consensus 255 ~LRGKrLaFVGDSLaRNQ~eSLlCLL~ 281 (530)
++.|.+|+||||..+-+-..||+=+|.
T Consensus 1 kl~gl~i~~vGD~~nsrv~~Sli~~l~ 27 (160)
T d1ekxa2 1 RLDNLHVAMVGDLKYGRTVHSLTQALA 27 (160)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHHH
Confidence 367999999999876556788876664
No 15
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]}
Probab=37.90 E-value=5.9 Score=32.87 Aligned_cols=12 Identities=50% Similarity=0.706 Sum_probs=10.3
Q ss_pred cEEEEecchhHH
Q 009629 260 TLAFIGDSLGRQ 271 (530)
Q Consensus 260 rLaFVGDSLaRN 271 (530)
+|+|+|||++..
T Consensus 3 kIl~~GDSit~G 14 (179)
T d1jrla_ 3 TLLILGDSLSAG 14 (179)
T ss_dssp EEEEEESHHHHC
T ss_pred EEEEEeChhhhC
Confidence 699999999963
No 16
>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=35.82 E-value=5.3 Score=33.48 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=21.9
Q ss_pred HHcCCcEEEEecchhHHHHHHHHHhhcC
Q 009629 255 RMQDRTLAFIGDSLGRQQFQSLMCMVTG 282 (530)
Q Consensus 255 ~LRGKrLaFVGDSLaRNQ~eSLlCLL~~ 282 (530)
++.|++|+||||=..-|-..||+-+|..
T Consensus 1 kl~gl~i~~vGD~~~srV~~Sli~~~~~ 28 (157)
T d1ml4a2 1 RIDGLKIGLLGDLKYGRTVHSLAEALTF 28 (157)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGG
T ss_pred CcCCCEEEEEcCCccChHHHHHHHHHHh
Confidence 3679999999996655567899988853
No 17
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=30.27 E-value=9.3 Score=32.85 Aligned_cols=28 Identities=21% Similarity=0.223 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEEeccCCCc
Q 009629 407 TIHSIVSWVNSQLPEHPRLKAFYRSISPRHF 437 (530)
Q Consensus 407 al~Tw~~wV~~~l~~~~~t~VFfRT~SP~Hf 437 (530)
.++..++-+.+.. ++++|++-++.|.-.
T Consensus 107 ~~~~li~~i~~~~---p~~~i~v~~~~P~~~ 134 (211)
T d2hsja1 107 NLEAIIQSVARDY---PLTEIKLLSILPVNE 134 (211)
T ss_dssp HHHHHHHHHHHHC---TTCEEEEECCCCCCC
T ss_pred hhhhhhhhhcccc---ccceEEEeeecCCCc
Confidence 3445555454432 457889988877543
No 18
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=22.92 E-value=12 Score=31.53 Aligned_cols=27 Identities=19% Similarity=0.163 Sum_probs=19.1
Q ss_pred cCCceEEeecccccc--------------cccCC-CCccccc
Q 009629 475 KGTGVKLLDITALSQ--------------VRDEG-HISQYSI 501 (530)
Q Consensus 475 ~~~~v~LLDIT~LS~--------------lR~Dg-HPs~Y~~ 501 (530)
+...+.++|+..++. +.+|| ||+..+.
T Consensus 160 ~~~~v~~iDl~~~~~~~~~~~~~~~~~~~~~~DgiHpn~~G~ 201 (233)
T d1k7ca_ 160 EVAGVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGA 201 (233)
T ss_dssp HHHTCEEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHHHH
T ss_pred HHcCCCeeeHHHHHHHHHHHcCchhhhhhcCCCCcCCCHHHH
Confidence 344789999866542 56798 9998753
No 19
>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=20.01 E-value=22 Score=30.31 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=18.7
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhc
Q 009629 256 MQDRTLAFIGDSLGRQQFQSLMCMVT 281 (530)
Q Consensus 256 LRGKrLaFVGDSLaRNQ~eSLlCLL~ 281 (530)
+.|.+|+||||--+ |...||+=+++
T Consensus 3 ~~~l~i~~vGD~~n-nv~~Sli~~~~ 27 (183)
T d1duvg2 3 FNEMTLVYAGDARN-NMGNSMLEAAA 27 (183)
T ss_dssp GGGCEEEEESCTTS-HHHHHHHHHHH
T ss_pred cCCCEEEEEcCCcc-HHHHHHHHHHH
Confidence 56789999999434 67788876654
Done!