Query 009631
Match_columns 530
No_of_seqs 229 out of 932
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 15:27:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009631.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009631hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 4E-116 9E-121 889.7 38.2 442 65-525 42-489 (492)
2 KOG2182 Hydrolytic enzymes of 100.0 9E-109 2E-113 857.5 32.0 427 65-522 48-504 (514)
3 PF05577 Peptidase_S28: Serine 100.0 4E-106 9E-111 864.4 24.0 406 75-509 1-434 (434)
4 PF05576 Peptidase_S37: PS-10 100.0 3.9E-43 8.4E-48 359.8 22.9 367 68-518 31-412 (448)
5 PLN02298 hydrolase, alpha/beta 98.3 5.3E-06 1.1E-10 85.8 11.3 88 130-229 82-169 (330)
6 TIGR01250 pro_imino_pep_2 prol 98.1 1.5E-05 3.3E-10 78.3 10.8 106 105-228 25-130 (288)
7 PLN02385 hydrolase; alpha/beta 98.1 2.3E-05 5E-10 81.9 12.4 86 129-227 109-195 (349)
8 TIGR01840 esterase_phb esteras 98.1 1.3E-05 2.9E-10 77.8 9.6 118 106-230 13-131 (212)
9 PF12697 Abhydrolase_6: Alpha/ 98.1 2.4E-05 5.1E-10 73.5 10.0 102 108-230 1-102 (228)
10 TIGR02427 protocat_pcaD 3-oxoa 98.0 1.2E-05 2.5E-10 77.2 7.5 103 105-229 12-114 (251)
11 PRK00870 haloalkane dehalogena 98.0 5.9E-05 1.3E-09 76.9 12.2 76 136-227 73-148 (302)
12 TIGR01249 pro_imino_pep_1 prol 98.0 2.5E-05 5.5E-10 80.0 9.5 104 105-229 27-130 (306)
13 PRK10749 lysophospholipase L2; 98.0 4.7E-05 1E-09 79.1 11.3 87 134-228 79-165 (330)
14 PHA02857 monoglyceride lipase; 97.8 0.00014 3E-09 72.9 11.4 108 106-229 25-132 (276)
15 PLN02824 hydrolase, alpha/beta 97.8 9.5E-05 2.1E-09 74.9 10.4 90 127-229 48-137 (294)
16 TIGR03056 bchO_mg_che_rel puta 97.8 8.4E-05 1.8E-09 73.5 9.6 104 105-229 27-130 (278)
17 TIGR03695 menH_SHCHC 2-succiny 97.8 0.00011 2.4E-09 70.0 10.0 83 128-228 21-104 (251)
18 TIGR03611 RutD pyrimidine util 97.7 9.8E-05 2.1E-09 71.5 8.3 74 136-226 39-112 (257)
19 PLN02211 methyl indole-3-aceta 97.7 0.00021 4.6E-09 72.3 10.7 105 104-227 16-120 (273)
20 TIGR02240 PHA_depoly_arom poly 97.7 0.00019 4.2E-09 72.0 10.3 113 89-229 13-126 (276)
21 PRK10673 acyl-CoA esterase; Pr 97.7 0.00021 4.5E-09 70.2 10.2 97 105-225 16-112 (255)
22 TIGR03343 biphenyl_bphD 2-hydr 97.7 0.00013 2.8E-09 72.9 8.4 77 135-228 59-135 (282)
23 PRK10566 esterase; Provisional 97.7 0.00021 4.6E-09 70.3 9.7 111 106-226 27-140 (249)
24 PRK11126 2-succinyl-6-hydroxy- 97.6 0.00034 7.4E-09 68.2 10.2 74 136-228 27-101 (242)
25 PRK03592 haloalkane dehalogena 97.6 0.00035 7.7E-09 70.8 10.4 102 105-229 27-128 (295)
26 PF00561 Abhydrolase_1: alpha/ 97.6 0.0002 4.3E-09 68.4 8.1 76 139-228 3-78 (230)
27 TIGR01607 PST-A Plasmodium sub 97.5 0.00052 1.1E-08 71.6 9.5 87 135-230 73-186 (332)
28 PLN02511 hydrolase 97.5 0.00054 1.2E-08 73.1 9.8 109 105-229 99-210 (388)
29 PLN02894 hydrolase, alpha/beta 97.4 0.00079 1.7E-08 72.2 10.8 113 97-227 97-209 (402)
30 PLN03084 alpha/beta hydrolase 97.4 0.00059 1.3E-08 72.7 9.7 86 128-229 147-232 (383)
31 PLN02652 hydrolase; alpha/beta 97.4 0.00081 1.8E-08 72.0 10.8 84 130-229 158-245 (395)
32 PRK03204 haloalkane dehalogena 97.4 0.00082 1.8E-08 68.3 10.3 76 136-228 60-135 (286)
33 PLN02965 Probable pheophorbida 97.4 0.00081 1.8E-08 66.8 10.0 102 106-227 4-105 (255)
34 PRK08775 homoserine O-acetyltr 97.4 0.00058 1.3E-08 71.3 9.3 104 105-227 57-171 (343)
35 TIGR03101 hydr2_PEP hydrolase, 97.3 0.0015 3.2E-08 66.3 10.9 107 106-229 25-134 (266)
36 PF00326 Peptidase_S9: Prolyl 97.3 0.0002 4.3E-09 69.2 4.4 92 130-229 8-99 (213)
37 TIGR01738 bioH putative pimelo 97.3 0.00077 1.7E-08 64.3 7.6 90 107-224 6-95 (245)
38 KOG4178 Soluble epoxide hydrol 97.3 0.0018 3.9E-08 66.6 10.4 118 90-230 32-149 (322)
39 TIGR02821 fghA_ester_D S-formy 97.2 0.0037 7.9E-08 63.3 12.6 117 105-229 41-173 (275)
40 PRK10349 carboxylesterase BioH 97.2 0.0013 2.7E-08 65.1 9.0 92 105-224 12-104 (256)
41 PRK14875 acetoin dehydrogenase 97.2 0.002 4.2E-08 67.2 10.1 80 129-228 152-231 (371)
42 COG2267 PldB Lysophospholipase 97.2 0.0027 5.9E-08 65.4 11.0 83 133-230 58-142 (298)
43 PRK06489 hypothetical protein; 97.1 0.011 2.5E-07 62.0 15.0 80 136-226 105-186 (360)
44 PLN02980 2-oxoglutarate decarb 97.1 0.0023 4.9E-08 80.0 10.9 121 91-227 1357-1478(1655)
45 PLN02578 hydrolase 97.1 0.002 4.3E-08 67.7 8.8 97 105-224 86-182 (354)
46 TIGR00976 /NonD putative hydro 97.1 0.0023 5E-08 71.4 9.7 109 106-229 22-132 (550)
47 KOG2564 Predicted acetyltransf 97.0 0.0032 6.9E-08 63.4 9.2 119 71-212 45-164 (343)
48 PLN02442 S-formylglutathione h 97.0 0.0073 1.6E-07 61.5 11.9 141 77-229 21-178 (283)
49 PLN02679 hydrolase, alpha/beta 97.0 0.0034 7.3E-08 66.2 9.7 81 129-228 109-190 (360)
50 PRK10985 putative hydrolase; P 96.9 0.0034 7.3E-08 65.1 9.1 85 131-229 82-168 (324)
51 PF10503 Esterase_phd: Esteras 96.9 0.0073 1.6E-07 59.5 10.1 116 106-229 16-132 (220)
52 PLN03087 BODYGUARD 1 domain co 96.8 0.0046 9.9E-08 67.8 9.2 105 106-229 202-309 (481)
53 TIGR03100 hydr1_PEP hydrolase, 96.8 0.0097 2.1E-07 60.2 10.8 105 106-229 27-134 (274)
54 PRK05077 frsA fermentation/res 96.7 0.0052 1.1E-07 66.2 8.5 107 105-229 193-300 (414)
55 KOG1455 Lysophospholipase [Lip 96.7 0.01 2.3E-07 60.4 9.8 83 135-230 81-164 (313)
56 PRK07581 hypothetical protein; 96.6 0.007 1.5E-07 62.8 8.3 85 136-226 71-156 (339)
57 TIGR01836 PHA_synth_III_C poly 96.5 0.012 2.5E-07 61.8 9.5 87 126-230 85-172 (350)
58 PRK05855 short chain dehydroge 96.5 0.0055 1.2E-07 67.8 7.4 79 136-229 51-131 (582)
59 PRK11460 putative hydrolase; P 96.4 0.019 4.2E-07 56.7 10.0 60 170-229 79-138 (232)
60 PF07859 Abhydrolase_3: alpha/ 96.4 0.006 1.3E-07 58.5 6.1 103 108-229 1-110 (211)
61 TIGR03502 lipase_Pla1_cef extr 96.4 0.014 2.9E-07 67.3 9.6 103 105-213 448-574 (792)
62 PF12695 Abhydrolase_5: Alpha/ 96.4 0.0075 1.6E-07 53.6 6.2 93 107-227 1-93 (145)
63 TIGR01392 homoserO_Ac_trn homo 96.3 0.021 4.6E-07 59.7 10.0 89 135-229 71-162 (351)
64 PF09752 DUF2048: Uncharacteri 96.2 0.027 5.8E-07 58.8 9.8 145 67-220 52-201 (348)
65 PF11144 DUF2920: Protein of u 96.2 0.042 9.1E-07 58.4 11.2 142 86-230 18-220 (403)
66 cd00707 Pancreat_lipase_like P 96.2 0.017 3.8E-07 58.7 8.2 107 105-224 35-142 (275)
67 PRK10162 acetyl esterase; Prov 96.0 0.026 5.5E-07 58.6 8.9 94 105-217 80-177 (318)
68 PRK10115 protease 2; Provision 95.9 0.018 3.9E-07 66.0 7.8 113 106-229 445-559 (686)
69 cd00312 Esterase_lipase Estera 95.7 0.024 5.2E-07 62.1 7.4 113 105-230 94-214 (493)
70 TIGR03230 lipo_lipase lipoprot 95.6 0.11 2.3E-06 56.5 11.8 74 136-221 73-146 (442)
71 PLN00021 chlorophyllase 95.4 0.069 1.5E-06 55.5 8.9 111 105-230 51-166 (313)
72 COG0596 MhpC Predicted hydrola 95.3 0.048 1E-06 51.2 6.9 100 107-229 23-123 (282)
73 KOG2382 Predicted alpha/beta h 95.1 0.095 2.1E-06 54.1 8.9 98 105-220 52-150 (315)
74 PF00975 Thioesterase: Thioest 95.0 0.047 1E-06 52.9 6.0 80 106-211 1-83 (229)
75 COG1506 DAP2 Dipeptidyl aminop 94.3 0.052 1.1E-06 61.6 5.0 108 107-230 395-508 (620)
76 PLN02872 triacylglycerol lipas 94.1 0.19 4.1E-06 54.0 8.5 105 106-217 75-182 (395)
77 PF00756 Esterase: Putative es 93.9 0.07 1.5E-06 52.6 4.6 50 180-229 101-150 (251)
78 COG0657 Aes Esterase/lipase [L 93.9 0.24 5.1E-06 50.9 8.5 91 105-214 78-172 (312)
79 KOG4391 Predicted alpha/beta h 93.2 0.12 2.5E-06 50.6 4.4 158 105-289 77-249 (300)
80 PRK00175 metX homoserine O-ace 93.1 0.53 1.1E-05 50.0 10.0 88 136-229 91-182 (379)
81 COG3509 LpqC Poly(3-hydroxybut 92.7 0.43 9.4E-06 48.8 8.0 109 105-228 60-180 (312)
82 COG0429 Predicted hydrolase of 92.6 0.5 1.1E-05 49.1 8.4 124 86-229 59-185 (345)
83 KOG1838 Alpha/beta hydrolase [ 92.6 0.64 1.4E-05 49.7 9.5 110 105-229 124-235 (409)
84 COG4099 Predicted peptidase [G 91.8 0.98 2.1E-05 46.3 9.2 129 81-226 167-301 (387)
85 PRK06765 homoserine O-acetyltr 91.8 0.33 7.1E-06 52.0 6.3 53 168-226 140-193 (389)
86 PF05677 DUF818: Chlamydia CHL 91.8 0.7 1.5E-05 48.3 8.3 95 108-217 139-238 (365)
87 KOG2281 Dipeptidyl aminopeptid 91.2 0.24 5.1E-06 55.2 4.5 116 104-229 640-761 (867)
88 PTZ00472 serine carboxypeptida 91.2 0.54 1.2E-05 51.5 7.3 65 135-209 120-186 (462)
89 PF02129 Peptidase_S15: X-Pro 90.9 0.48 1E-05 47.7 6.2 111 105-229 19-136 (272)
90 PF03403 PAF-AH_p_II: Platelet 90.9 0.34 7.3E-06 51.7 5.2 39 106-147 100-138 (379)
91 PF07819 PGAP1: PGAP1-like pro 90.8 1.7 3.7E-05 42.9 9.8 53 178-230 66-124 (225)
92 PF00135 COesterase: Carboxyle 90.4 0.5 1.1E-05 51.7 6.3 115 106-230 125-246 (535)
93 KOG4409 Predicted hydrolase/ac 90.2 0.45 9.7E-06 49.7 5.2 91 106-220 91-186 (365)
94 PRK10439 enterobactin/ferric e 89.4 0.71 1.5E-05 49.8 6.3 47 183-229 275-323 (411)
95 PRK11071 esterase YqiA; Provis 89.4 1.5 3.3E-05 41.8 8.0 39 173-217 46-84 (190)
96 COG2021 MET2 Homoserine acetyl 89.2 0.51 1.1E-05 49.7 4.7 69 175-250 129-200 (368)
97 COG0400 Predicted esterase [Ge 88.7 0.79 1.7E-05 44.8 5.5 58 172-229 77-134 (207)
98 PRK13604 luxD acyl transferase 88.7 2.3 4.9E-05 44.2 9.1 98 106-226 37-138 (307)
99 TIGR01838 PHA_synth_I poly(R)- 88.4 2.2 4.7E-05 47.7 9.3 88 125-229 210-302 (532)
100 PF02230 Abhydrolase_2: Phosph 87.9 0.89 1.9E-05 44.1 5.3 59 171-230 83-141 (216)
101 KOG1454 Predicted hydrolase/ac 86.2 3.2 6.9E-05 43.4 8.6 30 194-223 128-157 (326)
102 PLN02733 phosphatidylcholine-s 86.2 1.6 3.4E-05 47.7 6.5 57 171-229 141-201 (440)
103 COG3208 GrsT Predicted thioest 85.9 0.63 1.4E-05 46.4 3.0 61 165-229 49-114 (244)
104 KOG2100 Dipeptidyl aminopeptid 85.3 1 2.3E-05 52.3 4.9 115 105-230 525-644 (755)
105 KOG1552 Predicted alpha/beta h 85.2 4 8.7E-05 41.1 8.3 113 86-224 45-158 (258)
106 PF06259 Abhydrolase_8: Alpha/ 85.2 2.2 4.8E-05 40.7 6.2 57 171-228 87-143 (177)
107 PF01764 Lipase_3: Lipase (cla 83.6 1.8 4E-05 38.4 4.8 28 185-214 57-84 (140)
108 PF11187 DUF2974: Protein of u 83.1 2.6 5.6E-05 41.7 6.0 50 177-229 70-123 (224)
109 cd00519 Lipase_3 Lipase (class 82.9 3.5 7.7E-05 40.2 6.9 36 176-213 112-147 (229)
110 KOG1553 Predicted alpha/beta h 82.4 6.4 0.00014 41.3 8.5 120 112-265 247-368 (517)
111 COG2819 Predicted hydrolase of 82.3 1.7 3.6E-05 44.0 4.3 45 187-231 130-174 (264)
112 PF10230 DUF2305: Uncharacteri 81.7 13 0.00029 37.5 10.7 103 106-216 2-106 (266)
113 PF08840 BAAT_C: BAAT / Acyl-C 81.0 2.9 6.3E-05 40.8 5.5 51 178-229 3-56 (213)
114 cd00741 Lipase Lipase. Lipase 80.7 3.2 7E-05 37.8 5.4 38 192-229 26-67 (153)
115 PLN02408 phospholipase A1 79.4 4.8 0.0001 42.7 6.7 54 172-229 182-240 (365)
116 PF05728 UPF0227: Uncharacteri 79.1 3.3 7.2E-05 39.8 5.0 43 169-217 40-82 (187)
117 PLN02454 triacylglycerol lipas 78.6 6.9 0.00015 42.2 7.6 40 173-212 207-246 (414)
118 PF05448 AXE1: Acetyl xylan es 78.0 7.6 0.00016 40.5 7.7 117 105-226 82-206 (320)
119 COG1770 PtrB Protease II [Amin 77.7 2.3 5E-05 47.9 3.8 143 71-226 402-559 (682)
120 PLN02310 triacylglycerol lipas 76.8 6 0.00013 42.6 6.6 56 172-229 189-248 (405)
121 PRK07868 acyl-CoA synthetase; 76.0 24 0.00051 42.6 12.2 85 128-229 92-177 (994)
122 PLN02571 triacylglycerol lipas 75.6 4.4 9.6E-05 43.6 5.2 38 172-213 208-245 (413)
123 PLN03037 lipase class 3 family 74.4 6.7 0.00015 43.3 6.3 56 172-229 298-358 (525)
124 PF01738 DLH: Dienelactone hyd 74.3 3.3 7.1E-05 40.0 3.6 113 106-227 14-130 (218)
125 PRK05371 x-prolyl-dipeptidyl a 74.1 13 0.00028 43.6 8.9 85 131-228 274-372 (767)
126 PLN02209 serine carboxypeptida 73.5 39 0.00085 36.9 12.0 47 168-214 140-191 (437)
127 PF12146 Hydrolase_4: Putative 72.4 7 0.00015 32.0 4.6 72 98-183 8-79 (79)
128 PLN02802 triacylglycerol lipas 72.4 9 0.0002 42.2 6.7 54 172-229 312-370 (509)
129 COG3319 Thioesterase domains o 72.3 8.7 0.00019 38.9 6.2 40 168-212 44-83 (257)
130 PRK10252 entF enterobactin syn 72.2 20 0.00043 44.1 10.5 92 106-223 1069-1165(1296)
131 PF02450 LCAT: Lecithin:choles 71.7 7.3 0.00016 41.7 5.8 58 170-230 98-161 (389)
132 COG0627 Predicted esterase [Ge 71.7 8.5 0.00018 40.1 6.1 118 105-230 53-188 (316)
133 KOG4627 Kynurenine formamidase 71.6 47 0.001 32.8 10.5 103 104-228 65-171 (270)
134 COG0412 Dienelactone hydrolase 71.1 9 0.0002 38.0 5.9 57 169-226 87-143 (236)
135 PF06500 DUF1100: Alpha/beta h 70.9 10 0.00023 40.8 6.7 110 105-231 189-298 (411)
136 PLN02761 lipase class 3 family 70.5 5.4 0.00012 44.1 4.5 41 172-212 272-312 (527)
137 PLN02324 triacylglycerol lipas 70.5 5.6 0.00012 42.8 4.5 37 172-212 197-233 (415)
138 PF06821 Ser_hydrolase: Serine 70.3 11 0.00024 35.5 6.1 53 177-229 38-91 (171)
139 COG1647 Esterase/lipase [Gener 67.2 37 0.00081 33.7 9.0 110 106-233 7-122 (243)
140 PLN02753 triacylglycerol lipas 67.2 6.8 0.00015 43.4 4.4 40 172-212 291-330 (531)
141 COG2272 PnbA Carboxylesterase 64.2 20 0.00042 39.5 7.1 106 104-216 92-201 (491)
142 PF00450 Peptidase_S10: Serine 64.1 12 0.00025 39.7 5.5 86 135-229 84-181 (415)
143 KOG3847 Phospholipase A2 (plat 63.9 15 0.00032 38.3 5.7 38 105-145 117-154 (399)
144 PF08538 DUF1749: Protein of u 62.4 96 0.0021 32.2 11.5 105 107-230 34-148 (303)
145 PF03583 LIP: Secretory lipase 62.4 31 0.00068 35.3 8.1 83 133-229 23-113 (290)
146 COG4757 Predicted alpha/beta h 62.2 13 0.00029 37.1 4.9 73 129-211 50-122 (281)
147 KOG1515 Arylacetamide deacetyl 61.5 36 0.00079 35.8 8.4 121 72-214 63-186 (336)
148 PLN00413 triacylglycerol lipas 61.5 12 0.00026 41.0 4.9 21 192-212 282-302 (479)
149 PF06057 VirJ: Bacterial virul 61.4 15 0.00033 35.5 5.1 56 169-226 45-100 (192)
150 PF07519 Tannase: Tannase and 61.2 13 0.00028 41.0 5.2 61 168-229 80-149 (474)
151 PF03096 Ndr: Ndr family; Int 60.3 18 0.00039 37.1 5.7 57 164-226 75-131 (283)
152 PLN02719 triacylglycerol lipas 55.9 14 0.0003 40.8 4.3 37 172-212 277-316 (518)
153 PLN02934 triacylglycerol lipas 55.8 16 0.00035 40.4 4.7 21 192-212 319-339 (515)
154 PLN02162 triacylglycerol lipas 55.8 27 0.00058 38.3 6.3 20 192-211 276-295 (475)
155 PRK04940 hypothetical protein; 54.6 28 0.00061 33.3 5.7 46 169-216 37-82 (180)
156 PF01738 DLH: Dienelactone hyd 53.4 12 0.00026 36.0 3.0 65 442-516 146-217 (218)
157 KOG2369 Lecithin:cholesterol a 49.6 27 0.00058 38.2 5.1 52 166-219 153-207 (473)
158 KOG3724 Negative regulator of 48.7 23 0.00049 41.1 4.6 34 196-230 184-221 (973)
159 PLN02213 sinapoylglucose-malat 45.9 28 0.0006 36.1 4.6 41 171-212 28-73 (319)
160 PF12740 Chlorophyllase2: Chlo 45.1 84 0.0018 31.9 7.6 101 106-229 17-130 (259)
161 PF07632 DUF1593: Protein of u 45.0 33 0.00073 34.7 4.7 51 170-223 127-178 (260)
162 KOG4569 Predicted lipase [Lipi 44.5 31 0.00066 36.3 4.6 35 172-212 155-189 (336)
163 COG5153 CVT17 Putative lipase 44.1 30 0.00064 35.6 4.1 35 192-229 274-308 (425)
164 KOG4540 Putative lipase essent 44.1 30 0.00064 35.6 4.1 35 192-229 274-308 (425)
165 PF01674 Lipase_2: Lipase (cla 42.8 36 0.00078 33.6 4.5 41 172-215 56-96 (219)
166 PLN03016 sinapoylglucose-malat 42.0 31 0.00066 37.6 4.3 66 136-211 115-186 (433)
167 PF05057 DUF676: Putative seri 39.3 47 0.001 32.3 4.8 46 168-213 52-97 (217)
168 PF12715 Abhydrolase_7: Abhydr 37.7 2E+02 0.0043 31.0 9.3 127 90-229 102-260 (390)
169 PRK10673 acyl-CoA esterase; Pr 37.1 38 0.00082 32.7 3.8 56 442-519 196-254 (255)
170 COG3544 Uncharacterized protei 36.2 37 0.0008 32.5 3.2 23 501-523 168-190 (190)
171 COG3545 Predicted esterase of 35.8 64 0.0014 30.9 4.8 50 178-228 43-93 (181)
172 PLN02847 triacylglycerol lipas 32.1 48 0.001 37.5 3.8 33 192-224 249-287 (633)
173 PHA02857 monoglyceride lipase; 31.5 62 0.0014 31.8 4.3 59 442-519 210-272 (276)
174 COG2382 Fes Enterochelin ester 31.4 35 0.00075 35.3 2.4 50 181-230 162-213 (299)
175 KOG1516 Carboxylesterase and r 29.7 1.3E+02 0.0029 33.2 7.0 116 106-231 112-234 (545)
176 smart00824 PKS_TE Thioesterase 29.4 2.9E+02 0.0062 25.1 8.3 23 193-215 63-85 (212)
177 TIGR01839 PHA_synth_II poly(R) 29.4 2.2E+02 0.0048 32.2 8.4 85 128-229 239-328 (560)
178 PF03283 PAE: Pectinacetyleste 29.1 2E+02 0.0043 30.6 7.8 36 195-230 157-197 (361)
179 PRK00091 miaA tRNA delta(2)-is 28.0 1.3E+02 0.0028 31.2 6.0 41 106-151 4-46 (307)
180 PLN02517 phosphatidylcholine-s 25.2 98 0.0021 35.2 4.7 41 172-214 193-233 (642)
181 KOG3975 Uncharacterized conser 25.0 3.1E+02 0.0067 28.0 7.6 111 86-213 14-125 (301)
182 PF10340 DUF2424: Protein of u 25.0 3.1E+02 0.0067 29.4 8.2 19 193-211 194-212 (374)
183 COG4947 Uncharacterized protei 23.9 63 0.0014 30.9 2.5 109 104-231 25-138 (227)
184 PF02419 PsbL: PsbL protein; 23.4 87 0.0019 21.9 2.4 21 8-28 13-33 (37)
185 PRK00753 psbL photosystem II r 23.1 79 0.0017 22.3 2.2 21 8-28 15-35 (39)
186 smart00580 PUG domain in prote 22.7 25 0.00054 27.2 -0.3 47 174-220 2-50 (58)
187 PLN02385 hydrolase; alpha/beta 22.7 1.5E+02 0.0032 30.7 5.4 62 442-521 280-346 (349)
188 KOG2237 Predicted serine prote 22.5 60 0.0013 36.9 2.4 61 168-229 523-584 (712)
189 PF06028 DUF915: Alpha/beta hy 21.9 1.2E+02 0.0026 30.6 4.3 41 173-215 84-124 (255)
190 KOG1454 Predicted hydrolase/ac 21.8 1.4E+02 0.003 31.1 5.0 55 442-519 265-323 (326)
191 PF01083 Cutinase: Cutinase; 21.8 1.7E+02 0.0038 27.6 5.2 88 129-230 29-123 (179)
192 CHL00038 psbL photosystem II p 21.3 91 0.002 21.9 2.2 21 8-28 14-34 (38)
193 TIGR03611 RutD pyrimidine util 20.9 1.3E+02 0.0028 28.3 4.3 55 442-518 199-256 (257)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=4.1e-116 Score=889.68 Aligned_cols=442 Identities=59% Similarity=1.096 Sum_probs=417.1
Q ss_pred cCCceeeEEEeecCCCCCCCCCcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeec
Q 009631 65 QYRYETRYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEH 144 (530)
Q Consensus 65 ~~~~~~~~f~Q~lDHFn~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEH 144 (530)
..++++.||.|+||||+..+..||.|||++|++||++. +||||+|+|+||+++++..|+||++++|.+++|++|+.||
T Consensus 42 ~~~ye~~yf~q~LDHFsF~~~~tF~qRylin~~fw~~g--~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEH 119 (492)
T KOG2183|consen 42 EYNYETRYFQQPLDHFSFTDNKTFDQRYLINDDFWKKG--EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEH 119 (492)
T ss_pred cccceeEEeecccccccccCccceeeEEEEecccccCC--CCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeeh
Confidence 45789999999999999999999999999999999853 3999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEe
Q 009631 145 RYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA 224 (530)
Q Consensus 145 RyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavA 224 (530)
||||+|.||++. ++|+.++|.|||+||||||+|.+++++|.++++..+|+|+||||||||||||||+||||++.||+|
T Consensus 120 RyYGeS~PFG~~--s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlA 197 (492)
T KOG2183|consen 120 RYYGESLPFGSQ--SYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALA 197 (492)
T ss_pred hccccCCCCcch--hccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhh
Confidence 999999999985 677889999999999999999999999999988899999999999999999999999999999999
Q ss_pred cccccccccCCCCcchhhHHHhhhhccCChhhHHHHHHHHHHHHHhhcCcccHHHHHHHcccccCCC-ChhHHHHHHHHH
Q 009631 225 SSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVGQKENGLLELTKTFHLCRELN-STEDLADWLESA 303 (530)
Q Consensus 225 SSApv~a~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~lk~~F~lc~~l~-~~~D~~~~~~~~ 303 (530)
|||||+.+++.+|...|+.+|+++|+..+++|...|++++.+|+++..+++|++.|.+.|++|.+++ +..++.+|++.+
T Consensus 198 aSAPvl~f~d~vp~~~f~~ivT~~F~~as~~C~~~I~~sW~ai~~l~~~~nG~q~Ls~~f~lc~~ln~d~~~l~d~l~ea 277 (492)
T KOG2183|consen 198 ASAPVLYFEDTVPKDVFYRIVTRDFKDASPNCRNTIRKSWDAIDRLAAKDNGLQILSKAFKLCKPLNDDIGDLKDYLREA 277 (492)
T ss_pred ccCceEeecCCCCcchhhhHHHHHHHhhcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHhhhcccccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 666899999999
Q ss_pred hhhhhhhcCCCCCCCCCCCCCCcHHHHhccccCCCCC-hhHHHHHHHHhhhhhccCCCcccccCCC--CC--CCCCccee
Q 009631 304 YSYLAMVDYPYPSDFMMPLPGYPIREVCKKIDNAPDA-TSILERIFEGVSVYYNYTGNVDCFQLDD--DP--HGLDGWNW 378 (530)
Q Consensus 304 ~~~~~~~qY~~~~~~~~~~~~~~~~~~C~~i~~~~~~-~~~l~~l~~~~~~~~~~~~~~~C~~~~~--~~--~~~R~W~y 378 (530)
+.+++||+||++++|+.++|++||.++|..|.....+ ++.++++++++++||||+|+..|++.++ .. .+.|.|.|
T Consensus 278 ~~ylAMVdYPy~t~Fl~pLPa~PV~~~C~~i~~~~~~~~~ll~~i~a~~~~yyNytg~~~C~d~sd~t~~~~~d~~gW~~ 357 (492)
T KOG2183|consen 278 YEYLAMVDYPYPTSFLAPLPAWPVKVVCKYINAPGPNDSDLLDRIFAAVNLYYNYTGSEKCYDISDPTYGSGLDDLGWPW 357 (492)
T ss_pred HHHHHHhcCCCCccccCcCCCCcHHHHHHHhccCCCChHHHHHHHHHHhhheeccCCCcchhccccccCCCCCCcCCCch
Confidence 9999999999999999999999999999999865433 5779999999999999999999999873 11 14689999
Q ss_pred eecccccCCCCCCCCCCCCCCCCCChhhHHHHhHhhcCCCCCcccccccccCcchhhhhhcccceEEEecCCCCCCCCCC
Q 009631 379 QACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEFGGHDIKSVLKLFGSNIIFSNGLLDPWSGGS 458 (530)
Q Consensus 379 QtCtE~g~~~t~~~~~~~f~~~~~~~~~~~~~C~~~Fg~~~~~~~~n~~yGG~~~~~~~~~~~tniif~nG~~DPW~~~g 458 (530)
|+|||+.+|.++++..+|||+.+++.+.+.+.|.+.||+.|+|+|+++.|||.++.. .+||||+||.+|||+.+|
T Consensus 358 QaCtEmVMp~~~ng~~~mf~~~~fn~~~y~e~C~~~~~v~prP~wi~t~fgg~~l~~-----~SNiIFSNG~LDPWSGGG 432 (492)
T KOG2183|consen 358 QACTEMVMPMCSNGVDDMFPDCPFNSESYQEGCMQTFGVTPRPKWITTEFGGADLSA-----FSNIIFSNGLLDPWSGGG 432 (492)
T ss_pred hhhhhhhhccccCCCcccCCCCCCCHHHHHHHHHHhcCCCCCCcceehhhccccchh-----hcceeeeCCCcCCccCcC
Confidence 999999999999998899999999999999999999999999999999999988887 589999999999999999
Q ss_pred cccCCCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhCcc
Q 009631 459 VLQNLSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWIDNYYRGKK 525 (530)
Q Consensus 459 v~~~~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~~Wl~~~~~~~~ 525 (530)
|+++++.++++++|++ |+||.||+.+++.||++|+++|++++++|++||++++...+
T Consensus 433 V~~nis~svvav~~k~----------GAHHlDLR~~~~~DP~~v~~aR~~Ei~iI~~WI~~~~r~~~ 489 (492)
T KOG2183|consen 433 VLKNISDSVVAVTIKE----------GAHHLDLRASHPEDPESVVEARELEIQIIKKWIKEFYRVLG 489 (492)
T ss_pred eeccccCcEEEEEecC----------CccceeccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999 99999999999999999999999999999999999987644
No 2
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=8.7e-109 Score=857.51 Aligned_cols=427 Identities=28% Similarity=0.512 Sum_probs=371.9
Q ss_pred cCCceeeEEEeecCCCCCCCCCcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccc--cccchhHhhcchhcCCeEEee
Q 009631 65 QYRYETRYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWF--AVNSGFVWDIAPRFGAMLVFP 142 (530)
Q Consensus 65 ~~~~~~~~f~Q~lDHFn~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~--~~~~g~~~~lA~~~ga~vv~l 142 (530)
....++.||+|++|||+. +++.|.||||++..+|.. ++|||||||||||++... ....+.+..+|+++||.|+.|
T Consensus 48 ~~~~~~~~~~Q~lDhF~~-~~~~~~Qq~~y~n~~~~~--~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~l 124 (514)
T KOG2182|consen 48 PANVEQSTFTQKLDHFDS-SNGKFFQQRFYNNNQWAK--PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQL 124 (514)
T ss_pred cccccccchhhhhhhhhc-chhhhhhhheeecccccc--CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEe
Confidence 345778999999999954 467777777777777754 479999999999999843 345567889999999999999
Q ss_pred eceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCC-CEEEEecchhHHHHHHHHHHcCceeEE
Q 009631 143 EHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEAS-PVVLFGGSYGGMLAAWMRLKYPHIAIG 221 (530)
Q Consensus 143 EHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~-pwI~~GGSY~GaLAaW~R~kYP~lv~g 221 (530)
||||||+|+|++++ +++||||||++|||||+|+||+.++.+++.++. |||+|||||+|+||||||+||||++.|
T Consensus 125 EHRFYG~S~P~~~~-----st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~G 199 (514)
T KOG2182|consen 125 EHRFYGQSSPIGDL-----STSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVG 199 (514)
T ss_pred eeeccccCCCCCCC-----cccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhhee
Confidence 99999999999998 899999999999999999999999999876554 999999999999999999999999999
Q ss_pred EEecccccccccCCCCcchhhHHHhhhhccCChhhHHHHHHHHHHHHHhhcCcccHHHHHHHcccccCCC---ChhHHHH
Q 009631 222 ALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVGQKENGLLELTKTFHLCRELN---STEDLAD 298 (530)
Q Consensus 222 avASSApv~a~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~lk~~F~lc~~l~---~~~D~~~ 298 (530)
||||||||+|+ +||+||.++|+++++..+.+|.++|++++..|++++.+..++++||++|+||++++ ...|...
T Consensus 200 svASSapv~A~---~DF~EY~~VVe~s~~~~~~~C~~ai~~~f~~~~~l~~t~~gr~~Lk~~Fnl~~~f~~~~s~~d~~~ 276 (514)
T KOG2182|consen 200 SVASSAPVLAK---VDFYEYLMVVEESLRRYSPECADAIKEGFKSMEELLLTKGGRQALKSLFNLCPPFDNNVSDTDQHN 276 (514)
T ss_pred ecccccceeEE---ecHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccCCccccchhHHHHHH
Confidence 99999999974 68999999999999888999999999999999999999889999999999999883 2346888
Q ss_pred HHHHHhh-hhhhhcCCCCCCCCCCCCCCcHHHHhccccCCCCChhHHHHHHHHhhhhhccCCCcccccCCC---------
Q 009631 299 WLESAYS-YLAMVDYPYPSDFMMPLPGYPIREVCKKIDNAPDATSILERIFEGVSVYYNYTGNVDCFQLDD--------- 368 (530)
Q Consensus 299 ~~~~~~~-~~~~~qY~~~~~~~~~~~~~~~~~~C~~i~~~~~~~~~l~~l~~~~~~~~~~~~~~~C~~~~~--------- 368 (530)
|++++++ |++++||.++++ ........+.++|+.|.+.+.+ +.+.++.+.++.+.+..+ ..|.+.+.
T Consensus 277 ff~nv~~~FqgvvQY~gd~~-~~~~~~~~i~~~C~~l~n~t~~-d~v~~~~~~~~~~~~~~~-~~c~~~~Y~~~i~~~~n 353 (514)
T KOG2182|consen 277 FFSNVYSNFQGVVQYSGDNS-NATASGLGIPAMCDILNNKTPG-DDVVAVNKYMNWFNNGFG-YGCLDNTYNGMISYLKN 353 (514)
T ss_pred HHHHHHHhhhhheeecCCCC-cccccccChhHHHHHhhcCCCC-chHHHHHHHHHHHHhccC-CCcCCccHHHHHHHhhc
Confidence 9999987 699999998872 2223456799999999885444 558888888887776654 47888651
Q ss_pred --CC----CCCCcceeeecccccCCCCCCCCCCCCCCCCCChhhHHHHhHhhcCC-------CCCcccccccccC-cchh
Q 009631 369 --DP----HGLDGWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNV-------IPRPRWITTEFGG-HDIK 434 (530)
Q Consensus 369 --~~----~~~R~W~yQtCtE~g~~~t~~~~~~~f~~~~~~~~~~~~~C~~~Fg~-------~~~~~~~n~~yGG-~~~~ 434 (530)
.+ .++|+|+|||||||||+||+++.+++|. ..++++||+++|+++||- .+.++.||.+||| .+++
T Consensus 354 ~~~~~~~~~a~r~W~wQtCtEfG~yQttds~~~iFg-s~vp~~~fid~C~dlFG~~y~~~~i~~~V~~TN~~YGG~~~~~ 432 (514)
T KOG2182|consen 354 STEPGEDAAADRLWTWQTCTEFGYYQTTDSGNSIFG-STVPLDYFIDLCMDLFGAEYTAKGIDPNVDQTNYKYGGRDNYN 432 (514)
T ss_pred ccCcCcccccchhhhhhhcccceeeEecCCCCcccc-CCCChHHHHHHHHHHhCchhhhhHHHHHHHHhhhhcCcccccC
Confidence 11 2579999999999999999999899995 479999999999999993 3467889999999 5676
Q ss_pred hhhhcccceEEEecCCCCCCCCCCcccCCCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHH
Q 009631 435 SVLKLFGSNIIFSNGLLDPWSGGSVLQNLSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIE 514 (530)
Q Consensus 435 ~~~~~~~tniif~nG~~DPW~~~gv~~~~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~ 514 (530)
++||+|+||++||||++|...+.+.++++++|.| ++||+|||+..+.|+++|++||+.|.+.|+
T Consensus 433 ------atnVvf~NG~~DPWh~LG~~~st~~~~~~~li~g----------tsHCaDMyp~~~sD~~~L~~aR~~i~~~l~ 496 (514)
T KOG2182|consen 433 ------ATNVVFPNGSLDPWHALGLQNSTDSSVVSILING----------TSHCADMYPARDSDSPSLKAARNRIDQNLA 496 (514)
T ss_pred ------cceEEecCCCCCchhhhccccCCCCCceEEEecC----------CccccccCCCCCCccHHHHHHHHHHHHHHH
Confidence 4999999999999999999887677889999999 999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 009631 515 GWIDNYYR 522 (530)
Q Consensus 515 ~Wl~~~~~ 522 (530)
+||.....
T Consensus 497 ~wl~~~~~ 504 (514)
T KOG2182|consen 497 RWLHQQPN 504 (514)
T ss_pred HHhhhccc
Confidence 99987654
No 3
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=4.2e-106 Score=864.40 Aligned_cols=406 Identities=39% Similarity=0.731 Sum_probs=298.0
Q ss_pred eecCCCCCCCCCcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCC
Q 009631 75 QRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG 154 (530)
Q Consensus 75 Q~lDHFn~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~ 154 (530)
|+|||||+++.+||+||||+|++||++ +||||||+|||++++......|++.+||+++||++|+|||||||+|+|++
T Consensus 1 Q~lDHf~~~~~~tf~qRY~~n~~~~~~---~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~ 77 (434)
T PF05577_consen 1 QPLDHFNPSNNGTFSQRYWVNDQYYKP---GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFG 77 (434)
T ss_dssp EES-SS-SSTT-EEEEEEEEE-TT--T---TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTG
T ss_pred CCCCCCCCCCCCeEEEEEEEEhhhcCC---CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCcc
Confidence 899999998899999999999999974 59999999999999988788899999999999999999999999999999
Q ss_pred CccccccCCCcccCCCHHHHHHHHHHHHHHHhhhc-CCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccccccc
Q 009631 155 STEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFE 233 (530)
Q Consensus 155 ~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~-~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~a~~ 233 (530)
++ |++||||||+||||||+|+||+++|.++ ..+++|||+||||||||||||+|+||||+|+|||||||||++
T Consensus 78 ~~-----s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a-- 150 (434)
T PF05577_consen 78 DL-----STENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA-- 150 (434)
T ss_dssp GG-----GGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH--
T ss_pred cc-----chhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee--
Confidence 98 8999999999999999999999999876 456789999999999999999999999999999999999986
Q ss_pred CCCCcchhhHHHhhhhccCChhhHHHHHHHHHHHHHhhcCcccHHHHHHHcccccCCCCh--hHHHHHHHHHh-hhhhhh
Q 009631 234 DIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVGQKENGLLELTKTFHLCRELNST--EDLADWLESAY-SYLAMV 310 (530)
Q Consensus 234 ~~~df~~y~~~V~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~lk~~F~lc~~l~~~--~D~~~~~~~~~-~~~~~~ 310 (530)
+.||++|+++|++++...+++|+++|++++++|++++.++.++++|+++|++|.+++.. .|+..++..+. .+++++
T Consensus 151 -~~df~~y~~~v~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~~~~~l~~~f~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 229 (434)
T PF05577_consen 151 -KVDFWEYFEVVTESLRKYGPNCYDAIRAAFDQIDKLLKTGNGRQQLKKKFKLCFPLDDKNDDDFAYFFSSIADAFQGMV 229 (434)
T ss_dssp -CCTTTHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHCCTCHHHHHHHHHCTBSS---TCHCHHHHHHHHHHHHHHHHHT
T ss_pred -ecccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhhcccHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHH
Confidence 56899999999999887777799999999999999999888889999999999888753 57888776664 468899
Q ss_pred cCCCCCCCCCCCCCCcHHHHhccccCCCCChhHHHHHHHHhhhhhccCC---Cc-------ccccCCCC-C-----CCCC
Q 009631 311 DYPYPSDFMMPLPGYPIREVCKKIDNAPDATSILERIFEGVSVYYNYTG---NV-------DCFQLDDD-P-----HGLD 374 (530)
Q Consensus 311 qY~~~~~~~~~~~~~~~~~~C~~i~~~~~~~~~l~~l~~~~~~~~~~~~---~~-------~C~~~~~~-~-----~~~R 374 (530)
||++++++..+++..++..+|+.|++.... +.+.++......+..... .. .|.....+ . .+.|
T Consensus 230 qy~~~~~~~~~~~~~~i~~~C~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 308 (434)
T PF05577_consen 230 QYPYPGNFNSPLPAWPIRQLCDSLTNASWP-DEVLRLAALAQWYNNFNTTCYSNSCADFDYNCFDSTYDDSSFDDNADDR 308 (434)
T ss_dssp --SS-EESSSEE-SSHHHHHHHHCHTSSSH-HHHHHHHHHHHHHCCCH-SCCHHCCC--SS-BSSTT---SS----HHHH
T ss_pred hcCCCcccccCCCCcchHHHhhhhcccccC-chhHHHHHHHHHHHHhcCccccccccccccccccCCCCcccccccccch
Confidence 999988877777788999999999865333 322222222221111110 01 12222111 1 1369
Q ss_pred cceeeecccccCCCCCCCCCCCCCCCCCChhhHHHHhHhhcCCCC-------CcccccccccC-cchhhhhhcccceEEE
Q 009631 375 GWNWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIP-------RPRWITTEFGG-HDIKSVLKLFGSNIIF 446 (530)
Q Consensus 375 ~W~yQtCtE~g~~~t~~~~~~~f~~~~~~~~~~~~~C~~~Fg~~~-------~~~~~n~~yGG-~~~~~~~~~~~tniif 446 (530)
+|.||+|||||||||+++..++|+ +.++++++.++|+++||..+ +++++|.+||| +++.. +||+|
T Consensus 309 ~W~wQtCtE~G~fqt~~~~~~l~~-~~~~l~~~~~~C~~~Fg~~~~~~~i~~~~~~tN~~YGG~~~~~~------tnviF 381 (434)
T PF05577_consen 309 QWLWQTCTEFGYFQTADGPNSLFS-RLVNLDYYQDQCQDVFGPGPNPESIPPNVDWTNNYYGGWWNPNA------TNVIF 381 (434)
T ss_dssp HHHHHHCCT-B----B-SSSSSS--B---HHHHHHHHHHHHS----T------TCHHHHHHTTT--TT--------SEEE
T ss_pred hhHHHhhhhccceeccCCCCCccc-CCCCHHHHHHHHHHHhCCCccccccccchhHHhheeCccccCCC------CeEEe
Confidence 999999999999999998788884 57999999999999998543 56789999999 88875 99999
Q ss_pred ecCCCCCCCCCCcccCCCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHH
Q 009631 447 SNGLLDPWSGGSVLQNLSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETE 509 (530)
Q Consensus 447 ~nG~~DPW~~~gv~~~~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i 509 (530)
+||++||||.+|+.++.+.++++++||| ++||.||+++++.||++|++||++|
T Consensus 382 tNG~~DPW~~lgv~~~~~~~~~~~~I~g----------~~Hc~Dl~~~~~~D~~~l~~aR~~i 434 (434)
T PF05577_consen 382 TNGELDPWRALGVTSDSSDSVPAIVIPG----------GAHCSDLYPPNPNDPPELKAARQRI 434 (434)
T ss_dssp EEETT-CCGGGS--S-SSSSEEEEEETT------------TTGGGS---TT--HHHHHHHHH-
T ss_pred eCCCCCCcccccCCCCCCCCcccEEECC----------CeeeccccCCCCCCCHHHHHHHhhC
Confidence 9999999999999988888899999999 9999999999999999999999987
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=100.00 E-value=3.9e-43 Score=359.80 Aligned_cols=367 Identities=23% Similarity=0.297 Sum_probs=251.8
Q ss_pred ceeeEEEeecCCCCCCCCCcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceee
Q 009631 68 YETRYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYY 147 (530)
Q Consensus 68 ~~~~~f~Q~lDHFn~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyY 147 (530)
+-..+|+|||||.+|+ .+||+||..+.++-. ..|.+|++.|.+-.. +.. ..|+++-++|+.|.+|||||
T Consensus 31 ffvl~y~QPvDH~~P~-~gtF~QRvtLlHk~~-----drPtV~~T~GY~~~~----~p~-r~Ept~Lld~NQl~vEhRfF 99 (448)
T PF05576_consen 31 FFVLRYTQPVDHRHPE-KGTFQQRVTLLHKDF-----DRPTVLYTEGYNVST----SPR-RSEPTQLLDGNQLSVEHRFF 99 (448)
T ss_pred EEEEeeecCCCCCCCC-CCceEEEEEEEEcCC-----CCCeEEEecCccccc----Ccc-ccchhHhhccceEEEEEeec
Confidence 3456899999999998 999999999999875 389999999887532 122 35999999999999999999
Q ss_pred ecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 148 GESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 148 G~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
|.|+|-+ .+|+|||++||.+|.++.++.+|..|. .|||..|||.|||.|.++|..||+.++|+||.+|
T Consensus 100 ~~SrP~p---------~DW~~Lti~QAA~D~Hri~~A~K~iY~---~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 100 GPSRPEP---------ADWSYLTIWQAASDQHRIVQAFKPIYP---GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred cCCCCCC---------CCcccccHhHhhHHHHHHHHHHHhhcc---CCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 9999965 389999999999999999999999986 5899999999999999999999999999999999
Q ss_pred cccc--ccCCCCcchhhHHHhhhhccCChhhHHHHHHHHHHHHHhhcCcccHHHHHHHcc-ccc--CCC--ChhHHHHHH
Q 009631 228 PILQ--FEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVGQKENGLLELTKTFH-LCR--ELN--STEDLADWL 300 (530)
Q Consensus 228 pv~a--~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~lk~~F~-lc~--~l~--~~~D~~~~~ 300 (530)
|..- .+| ..|..|++.|+ .++|.++|++.+.++- .+.. +|..+|. .|. .++ ...-+...+
T Consensus 168 P~~~~~~eD-~~y~~Fl~~VG------t~eCR~~l~~~Qre~L---~RR~---~l~~~~~~yAa~~g~TF~~vG~~dra~ 234 (448)
T PF05576_consen 168 PNDVVNRED-SRYDRFLEKVG------TAECRDKLNDFQREAL---KRRD---ELLPRYEAYAAENGLTFRTVGSLDRAY 234 (448)
T ss_pred ccccCcccc-hhHHHHHHhcC------CHHHHHHHHHHHHHHH---hhHH---HHHHHHHHHHHHcCCEEeecCcHHHHH
Confidence 9742 222 12555666554 5789999999997653 2222 2222221 121 111 100111222
Q ss_pred HHH-hh-hhhhhcCCCCCCCCCCCCCCcHHHHhccccCC--CCChhHHHHHHHHhhhhhccCCCcccccCCCCCCCCCcc
Q 009631 301 ESA-YS-YLAMVDYPYPSDFMMPLPGYPIREVCKKIDNA--PDATSILERIFEGVSVYYNYTGNVDCFQLDDDPHGLDGW 376 (530)
Q Consensus 301 ~~~-~~-~~~~~qY~~~~~~~~~~~~~~~~~~C~~i~~~--~~~~~~l~~l~~~~~~~~~~~~~~~C~~~~~~~~~~R~W 376 (530)
+.. .. .++.+||.. ..-|+.|... +.+++.|-..+..+..+--|+ +.......++
T Consensus 235 E~~VLe~~faFWQy~~-------------~~~C~~IP~~~~~AsddeL~~~l~~isg~s~ys--------Dq~l~~y~py 293 (448)
T PF05576_consen 235 EYAVLEYPFAFWQYGT-------------PADCASIPADAKTASDDELFDFLDAISGFSFYS--------DQGLEPYTPY 293 (448)
T ss_pred HHHHhhhhhHhhccCC-------------ccchhcCCCCcCCCCHHHHHHHHHhhcCccccc--------cCCcccccCh
Confidence 222 11 246788874 2358888753 333333333333322111111 1112235789
Q ss_pred eeeecccccCCCCCCCCCCCCCCCCCChhhHHHHhHhhcCCCCCcccccccc---cCcchhhhhhcccceEEEecCCCCC
Q 009631 377 NWQACTEMVMPMSSSRDKSMFPAYDYNYSSFKEECWNDFNVIPRPRWITTEF---GGHDIKSVLKLFGSNIIFSNGLLDP 453 (530)
Q Consensus 377 ~yQtCtE~g~~~t~~~~~~~f~~~~~~~~~~~~~C~~~Fg~~~~~~~~n~~y---GG~~~~~~~~~~~tniif~nG~~DP 453 (530)
+||.-||+|||...... +.+..+...+ .=...| -|..+.++| -..++..|++++++|+||++|++||
T Consensus 294 yyQA~teLG~p~~~~~h---l~~~ll~~g~---~~~r~f----vP~~i~m~Fdp~am~dI~~Wvr~~~~rmlFVYG~nDP 363 (448)
T PF05576_consen 294 YYQAGTELGYPGYDTPH---LRKKLLRYGY---QPPRNF----VPRDIPMKFDPTAMRDIDRWVRNNGPRMLFVYGENDP 363 (448)
T ss_pred HHHHHhhcCCCCCCCcc---hhccccccCC---CCcccC----CCCCCCCCcCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 99999999998654331 1000000000 001112 122222333 2358889999999999999999999
Q ss_pred CCCCCcccC-CCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 009631 454 WSGGSVLQN-LSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWID 518 (530)
Q Consensus 454 W~~~gv~~~-~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~~Wl~ 518 (530)
|++.++.-. ...+..+++.|| ++|.+++..-. + +.|+++++.|++|-.
T Consensus 364 W~A~~f~l~~g~~ds~v~~~Pg----------gnHga~I~~L~----~---~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 364 WSAEPFRLGKGKRDSYVFTAPG----------GNHGARIAGLP----E---AERAEATARLRRWAG 412 (448)
T ss_pred cccCccccCCCCcceEEEEcCC----------CcccccccCCC----H---HHHHHHHHHHHHHcC
Confidence 999888632 355678899999 99999987543 2 468899999999975
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.27 E-value=5.3e-06 Score=85.78 Aligned_cols=88 Identities=20% Similarity=0.231 Sum_probs=70.8
Q ss_pred hcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHH
Q 009631 130 DIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAA 209 (530)
Q Consensus 130 ~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAa 209 (530)
.|++ .|-.|+++.+|-||+|..... . .-+.++.+.|+..|++.++......+.|++++|.|.||++|.
T Consensus 82 ~L~~-~Gy~V~~~D~rGhG~S~~~~~----------~-~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~ 149 (330)
T PLN02298 82 FLAQ-MGFACFALDLEGHGRSEGLRA----------Y-VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICL 149 (330)
T ss_pred HHHh-CCCEEEEecCCCCCCCCCccc----------c-CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHH
Confidence 4443 478999999999999853211 1 236788899999999999865433456899999999999999
Q ss_pred HHHHHcCceeEEEEeccccc
Q 009631 210 WMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 210 W~R~kYP~lv~gavASSApv 229 (530)
++..++|+.+.|.|..++++
T Consensus 150 ~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 150 LIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHHhcCcccceeEEEecccc
Confidence 99999999999999887655
No 6
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.14 E-value=1.5e-05 Score=78.34 Aligned_cols=106 Identities=21% Similarity=0.204 Sum_probs=77.8
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
+.||+++-|+-+....++ ..+..+.++.|-.||.+++|-+|.|..... .-++.+.++..+|+..+++.
T Consensus 25 ~~~vl~~hG~~g~~~~~~---~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYL---ENLRELLKEEGREVIMYDQLGCGYSDQPDD---------SDELWTIDYFVDELEEVREK 92 (288)
T ss_pred CCeEEEEcCCCCccHHHH---HHHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------ccccccHHHHHHHHHHHHHH
Confidence 357888888655432221 123455555689999999999999875322 11257889999999888775
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSAp 228 (530)
++. .+++++|.|+||.+|.++-.++|+.+.+.+..++.
T Consensus 93 ~~~------~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 93 LGL------DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred cCC------CcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 542 36999999999999999999999999888776643
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.12 E-value=2.3e-05 Score=81.94 Aligned_cols=86 Identities=26% Similarity=0.293 Sum_probs=67.9
Q ss_pred hhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccC-CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHH
Q 009631 129 WDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY-LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGML 207 (530)
Q Consensus 129 ~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~y-Lt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 207 (530)
..+++ .|-.||++++|-||.|.... .| .+.+..+.|+..+++.++........|++++|.|+||++
T Consensus 109 ~~l~~-~g~~v~~~D~~G~G~S~~~~------------~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~v 175 (349)
T PLN02385 109 RKIAS-SGYGVFAMDYPGFGLSEGLH------------GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAV 175 (349)
T ss_pred HHHHh-CCCEEEEecCCCCCCCCCCC------------CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHH
Confidence 34444 47899999999999985311 12 366888999999998887543334568999999999999
Q ss_pred HHHHHHHcCceeEEEEeccc
Q 009631 208 AAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 208 AaW~R~kYP~lv~gavASSA 227 (530)
|..+..++|+.+.|.|..++
T Consensus 176 al~~a~~~p~~v~glVLi~p 195 (349)
T PLN02385 176 ALKVHLKQPNAWDGAILVAP 195 (349)
T ss_pred HHHHHHhCcchhhheeEecc
Confidence 99999999999998887764
No 8
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.11 E-value=1.3e-05 Score=77.78 Aligned_cols=118 Identities=21% Similarity=0.276 Sum_probs=82.1
Q ss_pred CcEEEEeCCCC-CcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEG-DIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 106 gPIfl~~gGE~-~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
.|+++++=|-+ ....+....+ +..+|++.|..||+.++|.+|.+...-+. + ....... .....+|+..+++.
T Consensus 13 ~P~vv~lHG~~~~~~~~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~---~-~~~~~~~--~~~~~~~~~~~i~~ 85 (212)
T TIGR01840 13 RALVLALHGCGQTASAYVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDW---F-FTHHRAR--GTGEVESLHQLIDA 85 (212)
T ss_pred CCEEEEeCCCCCCHHHHhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCC---C-CccccCC--CCccHHHHHHHHHH
Confidence 67666655544 2222211122 56788999999999999988754321110 0 0000000 12457888889999
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
+++++..+..+++++|.|.||.+|..+..+||+.+.|+++-|++..
T Consensus 86 ~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 86 VKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 9888776677999999999999999999999999999988888764
No 9
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.06 E-value=2.4e-05 Score=73.53 Aligned_cols=102 Identities=25% Similarity=0.309 Sum_probs=77.0
Q ss_pred EEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhh
Q 009631 108 IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQ 187 (530)
Q Consensus 108 Ifl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~ 187 (530)
|+|.-|.-+....+ ..+...++ -|-.+|+++.|-+|.|.+..+ ....+.++..+|+..+++.+..
T Consensus 1 vv~~hG~~~~~~~~---~~~~~~l~--~~~~v~~~d~~G~G~s~~~~~----------~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESW---DPLAEALA--RGYRVIAFDLPGHGRSDPPPD----------YSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGG---HHHHHHHH--TTSEEEEEECTTSTTSSSHSS----------GSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHH---HHHHHHHh--CCCEEEEEecCCccccccccc----------cCCcchhhhhhhhhhccccccc
Confidence 34555544443222 12444564 388999999999999876332 3356779999999999887664
Q ss_pred hcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 188 NLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 188 ~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
.|++++|+|+||.++..+-.++|+.+.+.+..+++..
T Consensus 66 ------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 ------KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp ------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ------ccccccccccccccccccccccccccccceeeccccc
Confidence 5899999999999999999999999999998887763
No 10
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.04 E-value=1.2e-05 Score=77.19 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=75.6
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
+.|+++++.|=+.....+ ..+...+++ |-.++.+++|-+|+|.+. . ...+.++..+|+..+++.
T Consensus 12 ~~~~li~~hg~~~~~~~~--~~~~~~l~~--~~~v~~~d~~G~G~s~~~-~-----------~~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMW--DPVLPALTP--DFRVLRYDKRGHGLSDAP-E-----------GPYSIEDLADDVLALLDH 75 (251)
T ss_pred CCCeEEEEcCcccchhhH--HHHHHHhhc--ccEEEEecCCCCCCCCCC-C-----------CCCCHHHHHHHHHHHHHH
Confidence 578878877755332222 123334443 679999999999998431 1 134788888999998887
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
++. .|++++|+|+||+++..+-.++|+.+.+.+..+++.
T Consensus 76 ~~~------~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 76 LGI------ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred hCC------CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 642 479999999999999999999999998888766554
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.99 E-value=5.9e-05 Score=76.87 Aligned_cols=76 Identities=14% Similarity=0.219 Sum_probs=60.8
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
|-.||++.+|-||+|.+.+.. .-.+.+...+|++.|++++. ..|++++|+|+||.+|..+-.+|
T Consensus 73 gy~vi~~Dl~G~G~S~~~~~~----------~~~~~~~~a~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~ 136 (302)
T PRK00870 73 GHRVIAPDLIGFGRSDKPTRR----------EDYTYARHVEWMRSWFEQLD------LTDVTLVCQDWGGLIGLRLAAEH 136 (302)
T ss_pred CCEEEEECCCCCCCCCCCCCc----------ccCCHHHHHHHHHHHHHHcC------CCCEEEEEEChHHHHHHHHHHhC
Confidence 678999999999999754321 12367778888888887653 24899999999999999999999
Q ss_pred CceeEEEEeccc
Q 009631 216 PHIAIGALASSA 227 (530)
Q Consensus 216 P~lv~gavASSA 227 (530)
|+.+.+.+.-++
T Consensus 137 p~~v~~lvl~~~ 148 (302)
T PRK00870 137 PDRFARLVVANT 148 (302)
T ss_pred hhheeEEEEeCC
Confidence 999998876554
No 12
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.99 E-value=2.5e-05 Score=80.03 Aligned_cols=104 Identities=21% Similarity=0.241 Sum_probs=74.2
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
+.||+|.-|+.+.... .. +.......+-.||++++|-||.|.+-... .-.+.++..+|+..++++
T Consensus 27 ~~~lvllHG~~~~~~~----~~-~~~~~~~~~~~vi~~D~~G~G~S~~~~~~----------~~~~~~~~~~dl~~l~~~ 91 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD----PG-CRRFFDPETYRIVLFDQRGCGKSTPHACL----------EENTTWDLVADIEKLREK 91 (306)
T ss_pred CCEEEEECCCCCCCCC----HH-HHhccCccCCEEEEECCCCCCCCCCCCCc----------ccCCHHHHHHHHHHHHHH
Confidence 4678888888765321 11 11222234578999999999999753221 113677888898888776
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
++ ..+++++|+||||+++..+..+||+.+.+.|..++.+
T Consensus 92 l~------~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 LG------IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred cC------CCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 54 2479999999999999999999999988777665544
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=97.98 E-value=4.7e-05 Score=79.11 Aligned_cols=87 Identities=15% Similarity=0.085 Sum_probs=67.3
Q ss_pred hcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHH
Q 009631 134 RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 134 ~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~ 213 (530)
+.|..|+++.||-+|.|.+..+ ....-...+.+..++|+..+++.+.... +..|++++|.|+||++|.-+-.
T Consensus 79 ~~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 79 HLGYDVLIIDHRGQGRSGRLLD------DPHRGHVERFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred HCCCeEEEEcCCCCCCCCCCCC------CCCcCccccHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHHH
Confidence 4688999999999999964221 1111112478999999999998875443 2469999999999999999999
Q ss_pred HcCceeEEEEecccc
Q 009631 214 KYPHIAIGALASSAP 228 (530)
Q Consensus 214 kYP~lv~gavASSAp 228 (530)
++|+.+.+.+..+.+
T Consensus 151 ~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 151 RHPGVFDAIALCAPM 165 (330)
T ss_pred hCCCCcceEEEECch
Confidence 999999988877544
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=97.83 E-value=0.00014 Score=72.85 Aligned_cols=108 Identities=16% Similarity=0.192 Sum_probs=74.5
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~ 185 (530)
.|++|++=|-+.-...+ .-+...+++ .|-.++++.+|-||.|.+.. . + .-+...-+.|+..++..+
T Consensus 25 ~~~v~llHG~~~~~~~~--~~~~~~l~~-~g~~via~D~~G~G~S~~~~-~-----~-----~~~~~~~~~d~~~~l~~~ 90 (276)
T PHA02857 25 KALVFISHGAGEHSGRY--EELAENISS-LGILVFSHDHIGHGRSNGEK-M-----M-----IDDFGVYVRDVVQHVVTI 90 (276)
T ss_pred CEEEEEeCCCccccchH--HHHHHHHHh-CCCEEEEccCCCCCCCCCcc-C-----C-----cCCHHHHHHHHHHHHHHH
Confidence 46777754433222111 112333443 37899999999999997532 1 1 124455678888888777
Q ss_pred hhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 186 k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+..+. ..|++++|.|.||++|.-+..++|+.+.+.+..++++
T Consensus 91 ~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 91 KSTYP--GVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred HhhCC--CCCEEEEEcCchHHHHHHHHHhCccccceEEEecccc
Confidence 65443 5689999999999999999999999999988887554
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.83 E-value=9.5e-05 Score=74.90 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=70.8
Q ss_pred hHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHH
Q 009631 127 FVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGM 206 (530)
Q Consensus 127 ~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~Ga 206 (530)
.+..+++. +.||+...|-||.|.+.... ..+.-...+.++-..|++.|++++.. .|++++|.|.||+
T Consensus 48 ~~~~L~~~--~~vi~~DlpG~G~S~~~~~~-----~~~~~~~~~~~~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~ 114 (294)
T PLN02824 48 NTPVLAKS--HRVYAIDLLGYGYSDKPNPR-----SAPPNSFYTFETWGEQLNDFCSDVVG------DPAFVICNSVGGV 114 (294)
T ss_pred HHHHHHhC--CeEEEEcCCCCCCCCCCccc-----cccccccCCHHHHHHHHHHHHHHhcC------CCeEEEEeCHHHH
Confidence 34466765 49999999999999754321 11122467999999999999987752 4899999999999
Q ss_pred HHHHHHHHcCceeEEEEeccccc
Q 009631 207 LAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 207 LAaW~R~kYP~lv~gavASSApv 229 (530)
++.-+-.+||+.+.+.+.-+++.
T Consensus 115 va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 115 VGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHhChhheeEEEEECCCc
Confidence 99999999999999988876654
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.82 E-value=8.4e-05 Score=73.53 Aligned_cols=104 Identities=18% Similarity=0.141 Sum_probs=73.3
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
++|+++++.|=+.-...+ ..+...+++ +..++.+.+|-+|.|.+... .-.|.+...+|++.+++.
T Consensus 27 ~~~~vv~~hG~~~~~~~~--~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSW--RDLMPPLAR--SFRVVAPDLPGHGFTRAPFR-----------FRFTLPSMAEDLSALCAA 91 (278)
T ss_pred CCCeEEEEcCCCCCHHHH--HHHHHHHhh--CcEEEeecCCCCCCCCCccc-----------cCCCHHHHHHHHHHHHHH
Confidence 356666666643221111 223456666 47899999999999875322 124778888899988865
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+. ..|++++|.|+||+++..+..++|+.+.+.++.+++.
T Consensus 92 ~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 92 EG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 43 2478999999999999999999999888777666544
No 17
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.81 E-value=0.00011 Score=69.98 Aligned_cols=83 Identities=23% Similarity=0.275 Sum_probs=62.3
Q ss_pred HhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHH-HHHHHHHHhhhcCCCCCCEEEEecchhHH
Q 009631 128 VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALAD-FAVFITNLKQNLSAEASPVVLFGGSYGGM 206 (530)
Q Consensus 128 ~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaD-la~Fi~~~k~~~~~~~~pwI~~GGSY~Ga 206 (530)
...++ .|..|+.+++|.||.|.... .....+.++++.| +..+++.+. ..|++++|.|+||+
T Consensus 21 ~~~L~--~~~~v~~~d~~g~G~s~~~~----------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~G~S~Gg~ 82 (251)
T TIGR03695 21 IELLG--PHFRCLAIDLPGHGSSQSPD----------EIERYDFEEAAQDILATLLDQLG------IEPFFLVGYSMGGR 82 (251)
T ss_pred HHHhc--ccCeEEEEcCCCCCCCCCCC----------ccChhhHHHHHHHHHHHHHHHcC------CCeEEEEEeccHHH
Confidence 33444 37899999999999985321 2245677788888 565555432 35899999999999
Q ss_pred HHHHHHHHcCceeEEEEecccc
Q 009631 207 LAAWMRLKYPHIAIGALASSAP 228 (530)
Q Consensus 207 LAaW~R~kYP~lv~gavASSAp 228 (530)
+|..+-.++|+.+.+.+.-+++
T Consensus 83 ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 83 IALYYALQYPERVQGLILESGS 104 (251)
T ss_pred HHHHHHHhCchheeeeEEecCC
Confidence 9999999999999888776543
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.74 E-value=9.8e-05 Score=71.52 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=60.0
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
+..+|.+++|-+|.|..-.. .-.+.++..+|+..|++.++. .|++++|.|+||++|..+..++
T Consensus 39 ~~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~~~~~~~i~~~~~------~~~~l~G~S~Gg~~a~~~a~~~ 101 (257)
T TIGR03611 39 RFHVVTYDHRGTGRSPGELP-----------PGYSIAHMADDVLQLLDALNI------ERFHFVGHALGGLIGLQLALRY 101 (257)
T ss_pred ccEEEEEcCCCCCCCCCCCc-----------ccCCHHHHHHHHHHHHHHhCC------CcEEEEEechhHHHHHHHHHHC
Confidence 68999999999999964211 124789999999999987642 4799999999999999999999
Q ss_pred CceeEEEEecc
Q 009631 216 PHIAIGALASS 226 (530)
Q Consensus 216 P~lv~gavASS 226 (530)
|+.+.+.+.-+
T Consensus 102 ~~~v~~~i~~~ 112 (257)
T TIGR03611 102 PERLLSLVLIN 112 (257)
T ss_pred hHHhHHheeec
Confidence 99877766544
No 19
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.72 E-value=0.00021 Score=72.32 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=70.9
Q ss_pred CCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 104 RLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 104 ~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
.++|.|+++-|=+.....+ ..+...|++ .|-.++.+++|-+|.|.+.+. ...|.++..+|+..+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w--~~~~~~L~~-~g~~vi~~dl~g~G~s~~~~~-----------~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW--YKIRCLMEN-SGYKVTCIDLKSAGIDQSDAD-----------SVTTFDEYNKPLIDFLS 81 (273)
T ss_pred CCCCeEEEECCCCCCcCcH--HHHHHHHHh-CCCEEEEecccCCCCCCCCcc-----------cCCCHHHHHHHHHHHHH
Confidence 3567555555543221111 112223332 367999999999998754222 24677787888888887
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
.+.. ..+++++|+||||+++..+-.+||+.+.+.+--++
T Consensus 82 ~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~ 120 (273)
T PLN02211 82 SLPE-----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAA 120 (273)
T ss_pred hcCC-----CCCEEEEEECchHHHHHHHHHhChhheeEEEEecc
Confidence 6531 25899999999999999999999999887776544
No 20
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.71 E-value=0.00019 Score=72.05 Aligned_cols=113 Identities=19% Similarity=0.210 Sum_probs=78.2
Q ss_pred eeEEEEeccccCCCCCC-CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCccc
Q 009631 89 SQRYLINTDHWVGPNRL-GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLS 167 (530)
Q Consensus 89 ~QRY~~n~~~~~~~~~~-gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~ 167 (530)
+.+|++. .+. ++ .||+|.-|--+....+ ...+..+++ +-.||++.+|=||+|.. +..
T Consensus 13 ~~~~~~~----~~~-~~~~plvllHG~~~~~~~w---~~~~~~L~~--~~~vi~~Dl~G~G~S~~-~~~----------- 70 (276)
T TIGR02240 13 SIRTAVR----PGK-EGLTPLLIFNGIGANLELV---FPFIEALDP--DLEVIAFDVPGVGGSST-PRH----------- 70 (276)
T ss_pred EEEEEEe----cCC-CCCCcEEEEeCCCcchHHH---HHHHHHhcc--CceEEEECCCCCCCCCC-CCC-----------
Confidence 5677662 211 23 4777777633322211 123334554 36999999999999953 111
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 168 YLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 168 yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
-.+.+.-.+|+..|+.++.. .|++++|.|+||++|..+..++|+.+.+-+.-+++.
T Consensus 71 ~~~~~~~~~~~~~~i~~l~~------~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 71 PYRFPGLAKLAARMLDYLDY------GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred cCcHHHHHHHHHHHHHHhCc------CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 23677777888888887642 479999999999999999999999999888777665
No 21
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.71 E-value=0.00021 Score=70.22 Aligned_cols=97 Identities=18% Similarity=0.147 Sum_probs=71.5
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
+.||+|.-|.-++...+ ..+...+++. -.+|.++.|-+|+|.+.. -+|.++-.+|+..++..
T Consensus 16 ~~~iv~lhG~~~~~~~~---~~~~~~l~~~--~~vi~~D~~G~G~s~~~~-------------~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNL---GVLARDLVND--HDIIQVDMRNHGLSPRDP-------------VMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCchhHH---HHHHHHHhhC--CeEEEECCCCCCCCCCCC-------------CCCHHHHHHHHHHHHHH
Confidence 34677777655543211 1234455553 599999999999997522 14788888999999987
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEec
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALAS 225 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavAS 225 (530)
+.. .+++++|.|.||++|.-+-.++|+.|.+.+.-
T Consensus 78 l~~------~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli 112 (255)
T PRK10673 78 LQI------EKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112 (255)
T ss_pred cCC------CceEEEEECHHHHHHHHHHHhCHhhcceEEEE
Confidence 632 37899999999999999999999998887664
No 22
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.68 E-value=0.00013 Score=72.91 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=57.0
Q ss_pred cCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHH
Q 009631 135 FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (530)
Q Consensus 135 ~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~k 214 (530)
.|-.||+.++|-+|.|.+... +. .. +.. -..|+..|++.+. ..+++++|+|+||+++.-+..+
T Consensus 59 ~~~~vi~~D~~G~G~S~~~~~------~~-~~---~~~-~~~~l~~~l~~l~------~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 59 AGYRVILKDSPGFNKSDAVVM------DE-QR---GLV-NARAVKGLMDALD------IEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCEEEEECCCCCCCCCCCcC------cc-cc---cch-hHHHHHHHHHHcC------CCCeeEEEECchHHHHHHHHHh
Confidence 378999999999999975321 00 10 111 1467777776653 2488999999999999999999
Q ss_pred cCceeEEEEecccc
Q 009631 215 YPHIAIGALASSAP 228 (530)
Q Consensus 215 YP~lv~gavASSAp 228 (530)
||+.+.+.+.-+++
T Consensus 122 ~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 122 YPDRIGKLILMGPG 135 (282)
T ss_pred ChHhhceEEEECCC
Confidence 99999888876544
No 23
>PRK10566 esterase; Provisional
Probab=97.67 E-value=0.00021 Score=70.35 Aligned_cols=111 Identities=19% Similarity=0.240 Sum_probs=71.7
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccC--CCHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY--LTAEQALADFAVFIT 183 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~y--Lt~~QALaDla~Fi~ 183 (530)
.|+++++-|-+.....+ .-+...+++ .|-.++..++|.+|.|.+ ++ ....+.. =...++++|++.++.
T Consensus 27 ~p~vv~~HG~~~~~~~~--~~~~~~l~~-~G~~v~~~d~~g~G~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~ 96 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVY--SYFAVALAQ-AGFRVIMPDAPMHGARFS-GD------EARRLNHFWQILLQNMQEFPTLRA 96 (249)
T ss_pred CCEEEEeCCCCcccchH--HHHHHHHHh-CCCEEEEecCCcccccCC-Cc------cccchhhHHHHHHHHHHHHHHHHH
Confidence 57777776654221111 112234444 478999999999998743 22 1112211 123467888888888
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEE-EEecc
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIG-ALASS 226 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~g-avASS 226 (530)
.+++....+..+++++|.|+||.+|.++-.++|++..+ ++.++
T Consensus 97 ~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~ 140 (249)
T PRK10566 97 AIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGS 140 (249)
T ss_pred HHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCc
Confidence 87764334457999999999999999999999987644 34443
No 24
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.62 E-value=0.00034 Score=68.19 Aligned_cols=74 Identities=14% Similarity=0.063 Sum_probs=58.7
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
+--||+++.|-||.|.+... . +.++..+|+..+++.+. ..|++++|.|+||.+|.-+-.+|
T Consensus 27 ~~~vi~~D~~G~G~S~~~~~------------~-~~~~~~~~l~~~l~~~~------~~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAISV------------D-GFADVSRLLSQTLQSYN------ILPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred CCCEEEecCCCCCCCCCccc------------c-CHHHHHHHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHhC
Confidence 57999999999999964211 1 67788899988887643 35999999999999999999999
Q ss_pred Cce-eEEEEecccc
Q 009631 216 PHI-AIGALASSAP 228 (530)
Q Consensus 216 P~l-v~gavASSAp 228 (530)
|+. +.+.+..+++
T Consensus 88 ~~~~v~~lvl~~~~ 101 (242)
T PRK11126 88 LAGGLCGLIVEGGN 101 (242)
T ss_pred CcccccEEEEeCCC
Confidence 764 7777665544
No 25
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.60 E-value=0.00035 Score=70.76 Aligned_cols=102 Identities=19% Similarity=0.118 Sum_probs=75.8
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
+.||+|+-|.-+.... + ..++..|++.+ -||+...|-||.|.+... . .|.+...+|+..++++
T Consensus 27 g~~vvllHG~~~~~~~-w--~~~~~~L~~~~--~via~D~~G~G~S~~~~~-----------~-~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 27 GDPIVFLHGNPTSSYL-W--RNIIPHLAGLG--RCLAPDLIGMGASDKPDI-----------D-YTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEECCCCCCHHH-H--HHHHHHHhhCC--EEEEEcCCCCCCCCCCCC-----------C-CCHHHHHHHHHHHHHH
Confidence 3567776664433221 1 23455677764 999999999999964211 1 3777778999999887
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
++. .|++++|.|.||.+|.-+-.+||+.+.+.+.-++++
T Consensus 90 l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 90 LGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred hCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 752 589999999999999999999999999988777654
No 26
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.60 E-value=0.0002 Score=68.38 Aligned_cols=76 Identities=26% Similarity=0.340 Sum_probs=59.5
Q ss_pred EEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCce
Q 009631 139 LVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHI 218 (530)
Q Consensus 139 vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~l 218 (530)
||.+-.|-+|.|.|-... .+...+.+...+|+..+++.+.. .+++++|+||||+++..+-.+||+.
T Consensus 3 vi~~d~rG~g~S~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~------~~~~~vG~S~Gg~~~~~~a~~~p~~ 68 (230)
T PF00561_consen 3 VILFDLRGFGYSSPHWDP--------DFPDYTTDDLAADLEALREALGI------KKINLVGHSMGGMLALEYAAQYPER 68 (230)
T ss_dssp EEEEECTTSTTSSSCCGS--------GSCTHCHHHHHHHHHHHHHHHTT------SSEEEEEETHHHHHHHHHHHHSGGG
T ss_pred EEEEeCCCCCCCCCCccC--------CcccccHHHHHHHHHHHHHHhCC------CCeEEEEECCChHHHHHHHHHCchh
Confidence 788999999999972111 34466677777777766664442 3599999999999999999999999
Q ss_pred eEEEEecccc
Q 009631 219 AIGALASSAP 228 (530)
Q Consensus 219 v~gavASSAp 228 (530)
+.+.+..++|
T Consensus 69 v~~lvl~~~~ 78 (230)
T PF00561_consen 69 VKKLVLISPP 78 (230)
T ss_dssp EEEEEEESES
T ss_pred hcCcEEEeee
Confidence 9999988876
No 27
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.46 E-value=0.00052 Score=71.59 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=64.9
Q ss_pred cCCeEEeeeceeeecCCCCCCccccccCCCcccC-CCHHHHHHHHHHHHHHHhhhc-----------------CCC-CCC
Q 009631 135 FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY-LTAEQALADFAVFITNLKQNL-----------------SAE-ASP 195 (530)
Q Consensus 135 ~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~y-Lt~~QALaDla~Fi~~~k~~~-----------------~~~-~~p 195 (530)
.|-.|++++||-.|+|.-... ...+ -+.++.++|+..|++.+++.. ..+ +.|
T Consensus 73 ~G~~V~~~D~rGHG~S~~~~~---------~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 143 (332)
T TIGR01607 73 NGYSVYGLDLQGHGESDGLQN---------LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLP 143 (332)
T ss_pred CCCcEEEecccccCCCccccc---------cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCc
Confidence 478999999999999863211 1122 477889999999999987521 112 569
Q ss_pred EEEEecchhHHHHHHHHHHcCc--------eeEEEEecccccc
Q 009631 196 VVLFGGSYGGMLAAWMRLKYPH--------IAIGALASSAPIL 230 (530)
Q Consensus 196 wI~~GGSY~GaLAaW~R~kYP~--------lv~gavASSApv~ 230 (530)
+|++|+|.||+++.=+-+++|+ .+.|++.+|+++.
T Consensus 144 ~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 144 MYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred eeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceE
Confidence 9999999999999977766654 4778887777763
No 28
>PLN02511 hydrolase
Probab=97.45 E-value=0.00054 Score=73.08 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=76.8
Q ss_pred CCcEEEEe-CCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 105 LGPIFLYC-GNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 105 ~gPIfl~~-gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
++|+++++ |.+|.....+. .. +...+.+.|-.+|++.+|-+|.|..... ++. .....+|+..+++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~-~~-~~~~~~~~g~~vv~~d~rG~G~s~~~~~-----------~~~-~~~~~~Dl~~~i~ 164 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYV-RH-MLLRARSKGWRVVVFNSRGCADSPVTTP-----------QFY-SASFTGDLRQVVD 164 (388)
T ss_pred CCCEEEEECCCCCCCCCHHH-HH-HHHHHHHCCCEEEEEecCCCCCCCCCCc-----------CEE-cCCchHHHHHHHH
Confidence 56755555 55554332111 11 2233346688999999999999864321 111 1344679999999
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCce--eEEEEeccccc
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHI--AIGALASSAPI 229 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~l--v~gavASSApv 229 (530)
+++..+. +.|++++|.|.||+++.-+-.++|+. +.|+++=|+|.
T Consensus 165 ~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 165 HVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred HHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 9998763 57999999999999999999999987 78888777776
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.43 E-value=0.00079 Score=72.17 Aligned_cols=113 Identities=19% Similarity=0.173 Sum_probs=67.1
Q ss_pred cccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHH
Q 009631 97 DHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALA 176 (530)
Q Consensus 97 ~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALa 176 (530)
-+|.++ +++|.++++-|=+.-...+. -.+..+++. -.|+++++|-+|.|... +. .+-+.+++.+
T Consensus 97 ~~~~~~-~~~p~vvllHG~~~~~~~~~--~~~~~L~~~--~~vi~~D~rG~G~S~~~-~~----------~~~~~~~~~~ 160 (402)
T PLN02894 97 VTFDSK-EDAPTLVMVHGYGASQGFFF--RNFDALASR--FRVIAIDQLGWGGSSRP-DF----------TCKSTEETEA 160 (402)
T ss_pred EEecCC-CCCCEEEEECCCCcchhHHH--HHHHHHHhC--CEEEEECCCCCCCCCCC-Cc----------ccccHHHHHH
Confidence 345433 24565555554332111111 123456653 68999999999998531 11 1233455544
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 177 Dla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
+++.-+..+..... ..|++++|+|+||.+|..+..+||+.+.+.+..+.
T Consensus 161 ~~~~~i~~~~~~l~--~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p 209 (402)
T PLN02894 161 WFIDSFEEWRKAKN--LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGP 209 (402)
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECC
Confidence 43322222222222 24899999999999999999999999988776543
No 30
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.43 E-value=0.00059 Score=72.74 Aligned_cols=86 Identities=13% Similarity=0.013 Sum_probs=68.7
Q ss_pred HhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHH
Q 009631 128 VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGML 207 (530)
Q Consensus 128 ~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 207 (530)
+..+++ +..||++++|-||.|.+-... ...-.|.++...|+..|++.+.. .+++++|+|+||++
T Consensus 147 ~~~L~~--~~~Via~DlpG~G~S~~p~~~--------~~~~ys~~~~a~~l~~~i~~l~~------~~~~LvG~s~GG~i 210 (383)
T PLN03084 147 LPVLSK--NYHAIAFDWLGFGFSDKPQPG--------YGFNYTLDEYVSSLESLIDELKS------DKVSLVVQGYFSPP 210 (383)
T ss_pred HHHHhc--CCEEEEECCCCCCCCCCCccc--------ccccCCHHHHHHHHHHHHHHhCC------CCceEEEECHHHHH
Confidence 445654 679999999999998653220 11134888999999999988752 37899999999999
Q ss_pred HHHHHHHcCceeEEEEeccccc
Q 009631 208 AAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 208 AaW~R~kYP~lv~gavASSApv 229 (530)
+..+-..||+.+.+.+..++|.
T Consensus 211 a~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 211 VVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHhChHhhcEEEEECCCC
Confidence 9999999999999999988775
No 31
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.43 E-value=0.00081 Score=71.99 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=63.8
Q ss_pred hcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccC-CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHH
Q 009631 130 DIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY-LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLA 208 (530)
Q Consensus 130 ~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~y-Lt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLA 208 (530)
.+++ .|..++++.||-||.|.... .| -+.++.++|+..+++.++.++. ..|++++|.|+||.++
T Consensus 158 ~L~~-~Gy~V~~~D~rGhG~S~~~~------------~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ia 222 (395)
T PLN02652 158 QLTS-CGFGVYAMDWIGHGGSDGLH------------GYVPSLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVV 222 (395)
T ss_pred HHHH-CCCEEEEeCCCCCCCCCCCC------------CCCcCHHHHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHH
Confidence 4443 37899999999999985321 12 2568889999999999987642 4689999999999999
Q ss_pred HHHHHHcCc---eeEEEEeccccc
Q 009631 209 AWMRLKYPH---IAIGALASSAPI 229 (530)
Q Consensus 209 aW~R~kYP~---lv~gavASSApv 229 (530)
..+. .+|+ .+.|.+..|+.+
T Consensus 223 l~~a-~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 223 LKAA-SYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHH-hccCcccccceEEEECccc
Confidence 8764 4775 678888876443
No 32
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.42 E-value=0.00082 Score=68.30 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=57.4
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
+-.||++.+|-||.|....+ . -.+.+.-.+|+..+++.+. ..+.+++|+|+||++|..+-.+|
T Consensus 60 ~~~vi~~D~~G~G~S~~~~~----------~-~~~~~~~~~~~~~~~~~~~------~~~~~lvG~S~Gg~va~~~a~~~ 122 (286)
T PRK03204 60 RFRCVAPDYLGFGLSERPSG----------F-GYQIDEHARVIGEFVDHLG------LDRYLSMGQDWGGPISMAVAVER 122 (286)
T ss_pred CcEEEEECCCCCCCCCCCCc----------c-ccCHHHHHHHHHHHHHHhC------CCCEEEEEECccHHHHHHHHHhC
Confidence 36899999999999864222 1 1255666666766665432 25799999999999999999999
Q ss_pred CceeEEEEecccc
Q 009631 216 PHIAIGALASSAP 228 (530)
Q Consensus 216 P~lv~gavASSAp 228 (530)
|+.+.+.+..+++
T Consensus 123 p~~v~~lvl~~~~ 135 (286)
T PRK03204 123 ADRVRGVVLGNTW 135 (286)
T ss_pred hhheeEEEEECcc
Confidence 9999998876554
No 33
>PLN02965 Probable pheophorbidase
Probab=97.42 E-value=0.00081 Score=66.77 Aligned_cols=102 Identities=15% Similarity=0.052 Sum_probs=69.4
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~ 185 (530)
..|+|.-|.-..... | ...+..|+ +-+--||++.+|-+|+|-.... ...|.++..+|+..+++.+
T Consensus 4 ~~vvllHG~~~~~~~-w--~~~~~~L~-~~~~~via~Dl~G~G~S~~~~~-----------~~~~~~~~a~dl~~~l~~l 68 (255)
T PLN02965 4 IHFVFVHGASHGAWC-W--YKLATLLD-AAGFKSTCVDLTGAGISLTDSN-----------TVSSSDQYNRPLFALLSDL 68 (255)
T ss_pred eEEEEECCCCCCcCc-H--HHHHHHHh-hCCceEEEecCCcCCCCCCCcc-----------ccCCHHHHHHHHHHHHHhc
Confidence 456666654332211 1 12233343 2256899999999999942111 2456788888899998765
Q ss_pred hhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 186 k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
.. ..|++++|+|+||+++..+-.+||+.+.+.+--++
T Consensus 69 ~~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~ 105 (255)
T PLN02965 69 PP-----DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAA 105 (255)
T ss_pred CC-----CCCEEEEecCcchHHHHHHHHhCchheeEEEEEcc
Confidence 41 14899999999999999999999999987765444
No 34
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.41 E-value=0.00058 Score=71.27 Aligned_cols=104 Identities=14% Similarity=0.139 Sum_probs=70.7
Q ss_pred CCcEEEEeCCCCCccccc-----ccchhHhhcch---hc---CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHH
Q 009631 105 LGPIFLYCGNEGDIEWFA-----VNSGFVWDIAP---RF---GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQ 173 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~-----~~~g~~~~lA~---~~---ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~Q 173 (530)
+.|++|+.||-+...... .+.+.|..+.. .+ +--||++.+|-+|.|.+. . | +++.
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-~------------~-~~~~ 122 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV-P------------I-DTAD 122 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC-C------------C-CHHH
Confidence 469999989877543210 01123332222 22 468999999999887431 1 2 3455
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 174 ALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 174 ALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
...|++.|++++.. +.+++++|.|+||++|..+-.+||+.+.+.+.-++
T Consensus 123 ~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s 171 (343)
T PRK08775 123 QADAIALLLDALGI-----ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSG 171 (343)
T ss_pred HHHHHHHHHHHcCC-----CcceEEEEECHHHHHHHHHHHHChHhhheEEEECc
Confidence 67889988887642 13468999999999999999999999887775443
No 35
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.34 E-value=0.0015 Score=66.26 Aligned_cols=107 Identities=15% Similarity=-0.040 Sum_probs=75.2
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchh---cCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPR---FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~---~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi 182 (530)
.|+++++-|=+.-... ....+..+|+. .|-.++.+.+|-||+|.... . -.+.++.++|+...+
T Consensus 25 ~~~VlllHG~g~~~~~--~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~-------~-----~~~~~~~~~Dv~~ai 90 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNK--SRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF-------A-----AARWDVWKEDVAAAY 90 (266)
T ss_pred ceEEEEECCCcccccc--hhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc-------c-----cCCHHHHHHHHHHHH
Confidence 4677777653321000 01233344544 47799999999999986311 1 125678889999998
Q ss_pred HHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 183 ~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+.+++.. ..|++++|.|.||.+|..+..++|+.+.+.+..+.++
T Consensus 91 ~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 91 RWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 8887642 3699999999999999999999999998888776333
No 36
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.33 E-value=0.0002 Score=69.23 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=68.1
Q ss_pred hcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHH
Q 009631 130 DIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAA 209 (530)
Q Consensus 130 ~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAa 209 (530)
.+--+.|-.|+.+..|--+ .+++. + .+.++.-.-.+.+.|+...++.+.++...+..++.++|+||||.|++
T Consensus 8 ~~la~~Gy~v~~~~~rGs~---g~g~~---~--~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~ 79 (213)
T PF00326_consen 8 QLLASQGYAVLVPNYRGSG---GYGKD---F--HEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLAL 79 (213)
T ss_dssp HHHHTTT-EEEEEE-TTSS---SSHHH---H--HHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHH
T ss_pred HHHHhCCEEEEEEcCCCCC---ccchh---H--HHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccc
Confidence 4444578999999999543 33321 1 11234444567899999999999877655667999999999999999
Q ss_pred HHHHHcCceeEEEEeccccc
Q 009631 210 WMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 210 W~R~kYP~lv~gavASSApv 229 (530)
++-..+|+.+.++++.++++
T Consensus 80 ~~~~~~~~~f~a~v~~~g~~ 99 (213)
T PF00326_consen 80 LAATQHPDRFKAAVAGAGVS 99 (213)
T ss_dssp HHHHHTCCGSSEEEEESE-S
T ss_pred hhhcccceeeeeeeccceec
Confidence 99999999999999988766
No 37
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.27 E-value=0.00077 Score=64.32 Aligned_cols=90 Identities=19% Similarity=0.211 Sum_probs=60.2
Q ss_pred cEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHh
Q 009631 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (530)
Q Consensus 107 PIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k 186 (530)
||+|+-|.-+... .+ ..+...+++ +-.||+.++|-+|.|.+.. ..+.++..+|+..++
T Consensus 6 ~iv~~HG~~~~~~-~~--~~~~~~l~~--~~~vi~~d~~G~G~s~~~~-------------~~~~~~~~~~~~~~~---- 63 (245)
T TIGR01738 6 HLVLIHGWGMNAE-VF--RCLDEELSA--HFTLHLVDLPGHGRSRGFG-------------PLSLADAAEAIAAQA---- 63 (245)
T ss_pred eEEEEcCCCCchh-hH--HHHHHhhcc--CeEEEEecCCcCccCCCCC-------------CcCHHHHHHHHHHhC----
Confidence 5666665432222 11 122334444 4789999999999985422 234555555554331
Q ss_pred hhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEe
Q 009631 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA 224 (530)
Q Consensus 187 ~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavA 224 (530)
+.|++++|.|+||.++..+-.+||+.+.+.+.
T Consensus 64 ------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il 95 (245)
T TIGR01738 64 ------PDPAIWLGWSLGGLVALHIAATHPDRVRALVT 95 (245)
T ss_pred ------CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeE
Confidence 25899999999999999999999998887764
No 38
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.25 E-value=0.0018 Score=66.59 Aligned_cols=118 Identities=23% Similarity=0.283 Sum_probs=89.0
Q ss_pred eEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCC
Q 009631 90 QRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYL 169 (530)
Q Consensus 90 QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yL 169 (530)
-||++-.. + + .+||++|++=|--+....+ +-.+..+|.. |=.+|++.-|.||.|-+-. +-.--
T Consensus 32 I~~h~~e~-g--~-~~gP~illlHGfPe~wysw--r~q~~~la~~-~~rviA~DlrGyG~Sd~P~----------~~~~Y 94 (322)
T KOG4178|consen 32 IRLHYVEG-G--P-GDGPIVLLLHGFPESWYSW--RHQIPGLASR-GYRVIAPDLRGYGFSDAPP----------HISEY 94 (322)
T ss_pred EEEEEEee-c--C-CCCCEEEEEccCCccchhh--hhhhhhhhhc-ceEEEecCCCCCCCCCCCC----------Cccee
Confidence 67888776 2 2 3699999886543322211 2223455554 3789999999999987533 22355
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 170 t~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
|++--.+|+..++.++- ..+++++|++||+++|=++++.||+.+.|-+..|.|-.
T Consensus 95 t~~~l~~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred eHHHHHHHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 77777899999999887 36899999999999999999999999999999887764
No 39
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.24 E-value=0.0037 Score=63.33 Aligned_cols=117 Identities=17% Similarity=0.142 Sum_probs=69.5
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeec--eeeecCC-C-----------CCCccccccCCCcc--cC
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEH--RYYGESM-P-----------YGSTEVAYQNATTL--SY 168 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEH--RyYG~S~-P-----------~~~l~~~~~st~nL--~y 168 (530)
..|+++++-|=+.....+...+.+..+|.+.|-.||+.+- |-.|.+- + +-+. +...+ .|
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~-----~~~~~~~~~ 115 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDA-----TEEPWSQHY 115 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccC-----CcCcccccc
Confidence 3788777766654333333333455788888999999885 4433221 0 0000 00000 11
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 169 Lt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
--.+..+.|+..+ ++..+..+..+++++|.|+||.+|.++-.+||+.+.+.++.|+.+
T Consensus 116 ~~~~~~~~~l~~~---~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 116 RMYSYIVQELPAL---VAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred hHHHHHHHHHHHH---HHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 1111222333333 333444455689999999999999999999999998888766554
No 40
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.24 E-value=0.0013 Score=65.12 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=61.7
Q ss_pred CCc-EEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 105 LGP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 105 ~gP-Ifl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
|.| |+|+-|.-+... .| .-++..+++. --|+++++|-+|.|.... ..+.++.+.|+..+
T Consensus 12 g~~~ivllHG~~~~~~-~w--~~~~~~L~~~--~~vi~~Dl~G~G~S~~~~-------------~~~~~~~~~~l~~~-- 71 (256)
T PRK10349 12 GNVHLVLLHGWGLNAE-VW--RCIDEELSSH--FTLHLVDLPGFGRSRGFG-------------ALSLADMAEAVLQQ-- 71 (256)
T ss_pred CCCeEEEECCCCCChh-HH--HHHHHHHhcC--CEEEEecCCCCCCCCCCC-------------CCCHHHHHHHHHhc--
Confidence 444 666666433222 12 1233445443 789999999999986311 13566666665532
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEe
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA 224 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavA 224 (530)
. ..+++++|.|+||.+|..+..++|+.+.+.+.
T Consensus 72 ------~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil 104 (256)
T PRK10349 72 ------A--PDKAIWLGWSLGGLVASQIALTHPERVQALVT 104 (256)
T ss_pred ------C--CCCeEEEEECHHHHHHHHHHHhChHhhheEEE
Confidence 1 24789999999999999999999999998864
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.18 E-value=0.002 Score=67.24 Aligned_cols=80 Identities=16% Similarity=0.119 Sum_probs=60.5
Q ss_pred hhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHH
Q 009631 129 WDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLA 208 (530)
Q Consensus 129 ~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLA 208 (530)
..|++. -.++.+++|-+|.|.+... ..+.++..+|+..+++.+. ..+++++|+|+||.+|
T Consensus 152 ~~l~~~--~~v~~~d~~g~G~s~~~~~------------~~~~~~~~~~~~~~~~~~~------~~~~~lvG~S~Gg~~a 211 (371)
T PRK14875 152 AALAAG--RPVIALDLPGHGASSKAVG------------AGSLDELAAAVLAFLDALG------IERAHLVGHSMGGAVA 211 (371)
T ss_pred HHHhcC--CEEEEEcCCCCCCCCCCCC------------CCCHHHHHHHHHHHHHhcC------CccEEEEeechHHHHH
Confidence 345553 6899999999999854322 2356777778777776442 2479999999999999
Q ss_pred HHHHHHcCceeEEEEecccc
Q 009631 209 AWMRLKYPHIAIGALASSAP 228 (530)
Q Consensus 209 aW~R~kYP~lv~gavASSAp 228 (530)
.-+..++|+.+.+.+.-+++
T Consensus 212 ~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 212 LRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred HHHHHhCchheeEEEEECcC
Confidence 98888999998888776554
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.18 E-value=0.0027 Score=65.39 Aligned_cols=83 Identities=27% Similarity=0.336 Sum_probs=68.3
Q ss_pred hhcCCeEEeeeceeeecCCC--CCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHH
Q 009631 133 PRFGAMLVFPEHRYYGESMP--YGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAW 210 (530)
Q Consensus 133 ~~~ga~vv~lEHRyYG~S~P--~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW 210 (530)
..-|-.|+++.||-+|.|.. -+. .-+-++-+.|+..|++.++... ...|++++|+|.||.+|.=
T Consensus 58 ~~~G~~V~~~D~RGhG~S~r~~rg~------------~~~f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~ 123 (298)
T COG2267 58 AARGFDVYALDLRGHGRSPRGQRGH------------VDSFADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALL 123 (298)
T ss_pred HhCCCEEEEecCCCCCCCCCCCcCC------------chhHHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHH
Confidence 34578999999999999973 221 1226788999999999988653 3579999999999999999
Q ss_pred HHHHcCceeEEEEecccccc
Q 009631 211 MRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 211 ~R~kYP~lv~gavASSApv~ 230 (530)
+-..+|+-+.|++.|| |.+
T Consensus 124 ~~~~~~~~i~~~vLss-P~~ 142 (298)
T COG2267 124 YLARYPPRIDGLVLSS-PAL 142 (298)
T ss_pred HHHhCCccccEEEEEC-ccc
Confidence 9999999999999977 653
No 43
>PRK06489 hypothetical protein; Provisional
Probab=97.10 E-value=0.011 Score=62.04 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=55.2
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHH-HHHhhhcCCCCCCE-EEEecchhHHHHHHHHH
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI-TNLKQNLSAEASPV-VLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi-~~~k~~~~~~~~pw-I~~GGSY~GaLAaW~R~ 213 (530)
+-.||++..|-||.|....+. ...+..-.+.++..+|++.++ +++. . .++ +++|.|+||++|.-+-.
T Consensus 105 ~~~Via~Dl~GhG~S~~p~~~-----~~~~~~~~~~~~~a~~~~~~l~~~lg----i--~~~~~lvG~SmGG~vAl~~A~ 173 (360)
T PRK06489 105 KYFIILPDGIGHGKSSKPSDG-----LRAAFPRYDYDDMVEAQYRLVTEGLG----V--KHLRLILGTSMGGMHAWMWGE 173 (360)
T ss_pred CCEEEEeCCCCCCCCCCCCcC-----CCCCCCcccHHHHHHHHHHHHHHhcC----C--CceeEEEEECHHHHHHHHHHH
Confidence 468999999999998632210 011222346676666766643 3322 1 355 68999999999999999
Q ss_pred HcCceeEEEEecc
Q 009631 214 KYPHIAIGALASS 226 (530)
Q Consensus 214 kYP~lv~gavASS 226 (530)
+||+.+.+.|..+
T Consensus 174 ~~P~~V~~LVLi~ 186 (360)
T PRK06489 174 KYPDFMDALMPMA 186 (360)
T ss_pred hCchhhheeeeec
Confidence 9999999888543
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.08 E-value=0.0023 Score=79.97 Aligned_cols=121 Identities=21% Similarity=0.171 Sum_probs=78.0
Q ss_pred EEEEeccccCCCCCCC-cEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCC
Q 009631 91 RYLINTDHWVGPNRLG-PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYL 169 (530)
Q Consensus 91 RY~~n~~~~~~~~~~g-PIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yL 169 (530)
+||+...-+.. ++++ ||+|+-|.=+.... + ..++..+++. ..+|.+++|-||.|...+... ....-..+
T Consensus 1357 ~~~i~~~~~G~-~~~~~~vVllHG~~~s~~~-w--~~~~~~L~~~--~rVi~~Dl~G~G~S~~~~~~~----~~~~~~~~ 1426 (1655)
T PLN02980 1357 SCLIKVHEVGQ-NAEGSVVLFLHGFLGTGED-W--IPIMKAISGS--ARCISIDLPGHGGSKIQNHAK----ETQTEPTL 1426 (1655)
T ss_pred EEEEEEEecCC-CCCCCeEEEECCCCCCHHH-H--HHHHHHHhCC--CEEEEEcCCCCCCCCCccccc----cccccccC
Confidence 56665544421 1224 45555554443321 1 1233445543 589999999999996433210 11111246
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 170 t~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
+++...+|++.++++++ ..|++++|.|+||++|..+-.+||+.+.+.+.-++
T Consensus 1427 si~~~a~~l~~ll~~l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1427 SVELVADLLYKLIEHIT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred CHHHHHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 78888888888887654 24899999999999999999999999988875443
No 45
>PLN02578 hydrolase
Probab=97.07 E-value=0.002 Score=67.68 Aligned_cols=97 Identities=23% Similarity=0.210 Sum_probs=68.3
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
|.||+|.-|.-+... .+ .-....+++ +-.||++..|-+|.|-.- . ..| +.+...+|++.|++.
T Consensus 86 g~~vvliHG~~~~~~-~w--~~~~~~l~~--~~~v~~~D~~G~G~S~~~-~----------~~~-~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 86 GLPIVLIHGFGASAF-HW--RYNIPELAK--KYKVYALDLLGFGWSDKA-L----------IEY-DAMVWRDQVADFVKE 148 (354)
T ss_pred CCeEEEECCCCCCHH-HH--HHHHHHHhc--CCEEEEECCCCCCCCCCc-c----------ccc-CHHHHHHHHHHHHHH
Confidence 457766655333221 11 112345565 468999999999988531 1 123 667777899999887
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEe
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA 224 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavA 224 (530)
+.. .|++++|+|+||.+|..+..+||+.+.+.+.
T Consensus 149 ~~~------~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvL 182 (354)
T PLN02578 149 VVK------EPAVLVGNSLGGFTALSTAVGYPELVAGVAL 182 (354)
T ss_pred hcc------CCeEEEEECHHHHHHHHHHHhChHhcceEEE
Confidence 652 5899999999999999999999999987764
No 46
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.06 E-value=0.0023 Score=71.38 Aligned_cols=109 Identities=15% Similarity=0.038 Sum_probs=77.6
Q ss_pred CcEEEEeCCCCCccc--ccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEW--FAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 106 gPIfl~~gGE~~~~~--~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
.|++|++.|-+.... ..........+| +.|-.+|...+|-+|.|-- .. ..++ .+-.+|+..+|+
T Consensus 22 ~P~Il~~~gyg~~~~~~~~~~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g--~~----------~~~~-~~~~~D~~~~i~ 87 (550)
T TIGR00976 22 VPVILSRTPYGKDAGLRWGLDKTEPAWFV-AQGYAVVIQDTRGRGASEG--EF----------DLLG-SDEAADGYDLVD 87 (550)
T ss_pred CCEEEEecCCCCchhhccccccccHHHHH-hCCcEEEEEeccccccCCC--ce----------EecC-cccchHHHHHHH
Confidence 688888877764321 000111122333 3599999999999999852 11 1222 567899999999
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
.++++- ..+.++.++|.||||.++..+...+|..+.|.++.++..
T Consensus 88 ~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 88 WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 998652 234699999999999999999999999999988877664
No 47
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.02 E-value=0.0032 Score=63.38 Aligned_cols=119 Identities=23% Similarity=0.299 Sum_probs=84.0
Q ss_pred eEEEeecCCCCCCCCCcEeeEEEEeccccCCCCCCCcEEEEeCCCCCc-ccccccchhHhhcchhcCCeEEeeeceeeec
Q 009631 71 RYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDI-EWFAVNSGFVWDIAPRFGAMLVFPEHRYYGE 149 (530)
Q Consensus 71 ~~f~Q~lDHFn~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~-~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~ 149 (530)
.||+-+.|---+....||+--|-.+. .+.||||+..=|-|.- -.+ .-+..++......-++++.-|-+|+
T Consensus 45 ~yFdekedv~i~~~~~t~n~Y~t~~~------~t~gpil~l~HG~G~S~LSf---A~~a~el~s~~~~r~~a~DlRgHGe 115 (343)
T KOG2564|consen 45 DYFDEKEDVSIDGSDLTFNVYLTLPS------ATEGPILLLLHGGGSSALSF---AIFASELKSKIRCRCLALDLRGHGE 115 (343)
T ss_pred HhhccccccccCCCcceEEEEEecCC------CCCccEEEEeecCcccchhH---HHHHHHHHhhcceeEEEeeccccCc
Confidence 47888888665554458876554443 1358999887555432 111 2345677777888999999999999
Q ss_pred CCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH
Q 009631 150 SMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 150 S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R 212 (530)
|+--+. .-|+.|-.+.|+...++.+ |+....|+|++|+|.|||+|+...
T Consensus 116 Tk~~~e-----------~dlS~eT~~KD~~~~i~~~---fge~~~~iilVGHSmGGaIav~~a 164 (343)
T KOG2564|consen 116 TKVENE-----------DDLSLETMSKDFGAVIKEL---FGELPPQIILVGHSMGGAIAVHTA 164 (343)
T ss_pred cccCCh-----------hhcCHHHHHHHHHHHHHHH---hccCCCceEEEeccccchhhhhhh
Confidence 885332 1388888999988665544 444567999999999999998754
No 48
>PLN02442 S-formylglutathione hydrolase
Probab=96.99 E-value=0.0073 Score=61.55 Aligned_cols=141 Identities=17% Similarity=0.126 Sum_probs=78.4
Q ss_pred cCCCCCCCCCcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeee-----cCC
Q 009631 77 LDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYG-----ESM 151 (530)
Q Consensus 77 lDHFn~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG-----~S~ 151 (530)
+.|+.+..++.-.-+.|+=. ..++ ++-||++++=|.+.....+...+-+.+++.+.|..||+.+=+..| .+.
T Consensus 21 ~~~~s~~l~~~~~~~vy~P~-~~~~--~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~ 97 (283)
T PLN02442 21 YKHFSSTLGCSMTFSVYFPP-ASDS--GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEAD 97 (283)
T ss_pred EEEeccccCCceEEEEEcCC-cccC--CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCcc
Confidence 44566654444444444433 3222 357988887665432221222222346666778888888744333 110
Q ss_pred ------C---CCCccccccCCCc---ccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCcee
Q 009631 152 ------P---YGSTEVAYQNATT---LSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIA 219 (530)
Q Consensus 152 ------P---~~~l~~~~~st~n---L~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv 219 (530)
. +.+. ..+. .++++ ..++++...+...-... +..+++++|.|+||.+|.++-.+||+.+
T Consensus 98 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p~~~ 168 (283)
T PLN02442 98 SWDFGVGAGFYLNA-----TQEKWKNWRMYD--YVVKELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNPDKY 168 (283)
T ss_pred ccccCCCcceeecc-----ccCCCcccchhh--hHHHHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCchhE
Confidence 0 1010 0111 23322 23444444443332222 3457999999999999999999999999
Q ss_pred EEEEeccccc
Q 009631 220 IGALASSAPI 229 (530)
Q Consensus 220 ~gavASSApv 229 (530)
.++++-|++.
T Consensus 169 ~~~~~~~~~~ 178 (283)
T PLN02442 169 KSVSAFAPIA 178 (283)
T ss_pred EEEEEECCcc
Confidence 8888777654
No 49
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=96.98 E-value=0.0034 Score=66.16 Aligned_cols=81 Identities=19% Similarity=0.145 Sum_probs=60.7
Q ss_pred hhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHH
Q 009631 129 WDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLA 208 (530)
Q Consensus 129 ~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLA 208 (530)
..+++ +-.||++.+|-||+|.+..+ .. .|.+...+|+..|++.+.. .|++++|.|+||.++
T Consensus 109 ~~L~~--~~~via~Dl~G~G~S~~~~~----------~~-~~~~~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~ia 169 (360)
T PLN02679 109 GVLAK--NYTVYAIDLLGFGASDKPPG----------FS-YTMETWAELILDFLEEVVQ------KPTVLIGNSVGSLAC 169 (360)
T ss_pred HHHhc--CCEEEEECCCCCCCCCCCCC----------cc-ccHHHHHHHHHHHHHHhcC------CCeEEEEECHHHHHH
Confidence 34554 57999999999999964322 12 3777777888888876532 489999999999998
Q ss_pred HHHHH-HcCceeEEEEecccc
Q 009631 209 AWMRL-KYPHIAIGALASSAP 228 (530)
Q Consensus 209 aW~R~-kYP~lv~gavASSAp 228 (530)
..+.. .+|+.+.+.+.-+++
T Consensus 170 ~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 170 VIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred HHHHHhcChhhcCEEEEECCc
Confidence 76554 689999988866654
No 50
>PRK10985 putative hydrolase; Provisional
Probab=96.94 E-value=0.0034 Score=65.10 Aligned_cols=85 Identities=21% Similarity=0.162 Sum_probs=61.6
Q ss_pred cchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHH
Q 009631 131 IAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAW 210 (530)
Q Consensus 131 lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW 210 (530)
...+.|-.++...+|=+|.|-... . . ..+.. .++|+..+++.+++.+. ..|.+++|.|+||.+++.
T Consensus 82 ~l~~~G~~v~~~d~rG~g~~~~~~--------~-~--~~~~~-~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 82 AAQKRGWLGVVMHFRGCSGEPNRL--------H-R--IYHSG-ETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred HHHHCCCEEEEEeCCCCCCCccCC--------c-c--eECCC-chHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHH
Confidence 344568899999999998763211 0 1 11112 25899999999987654 468999999999998888
Q ss_pred HHHHcCce--eEEEEeccccc
Q 009631 211 MRLKYPHI--AIGALASSAPI 229 (530)
Q Consensus 211 ~R~kYP~l--v~gavASSApv 229 (530)
+-.++++. +.++++-|+|.
T Consensus 148 ~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 148 LLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred HHHhhCCCCCccEEEEEcCCC
Confidence 77777654 77888878786
No 51
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.85 E-value=0.0073 Score=59.54 Aligned_cols=116 Identities=23% Similarity=0.267 Sum_probs=73.9
Q ss_pred CcEEEEe-CCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 106 GPIFLYC-GNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 106 gPIfl~~-gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
-|++|++ |.-+..+.+...+ -+.++|.+.|.+||+-|--.-. .+.. ++.--+....-.... .+.++..|++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s-~~~~lAd~~GfivvyP~~~~~~--~~~~----cw~w~~~~~~~g~~d-~~~i~~lv~~ 87 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGS-GWNALADREGFIVVYPEQSRRA--NPQG----CWNWFSDDQQRGGGD-VAFIAALVDY 87 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhc-CHHHHhhcCCeEEEcccccccC--CCCC----cccccccccccCccc-hhhHHHHHHh
Confidence 5766664 4434444443333 3678999999999998732110 0110 010000000111111 2345666777
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+..++..+..++.+.|.|-||+|+.-+-..||++|.|.-..|++.
T Consensus 88 v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 88 VAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 788888889999999999999999999999999999877777665
No 52
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.81 E-value=0.0046 Score=67.83 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=71.3
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcch--hcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHH-HHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAP--RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFA-VFI 182 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~--~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla-~Fi 182 (530)
.||+|.-|.-++... |.. -.+..+++ +.+--+|+++.|-||+|....+ ...+.++.++|+. .|+
T Consensus 202 ~~VVLlHG~~~s~~~-W~~-~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-----------~~ytl~~~a~~l~~~ll 268 (481)
T PLN03087 202 EDVLFIHGFISSSAF-WTE-TLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-----------SLYTLREHLEMIERSVL 268 (481)
T ss_pred CeEEEECCCCccHHH-HHH-HHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-----------CcCCHHHHHHHHHHHHH
Confidence 467777765443321 111 11223332 2367999999999999853221 1357777778874 565
Q ss_pred HHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 183 ~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+.+. ..|.+++|+|+||++|..+..+||+.+.+.+.-++|.
T Consensus 269 ~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 269 ERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 5432 2489999999999999999999999998888766554
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.79 E-value=0.0097 Score=60.20 Aligned_cols=105 Identities=15% Similarity=0.026 Sum_probs=71.8
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcch---hcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAP---RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~---~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi 182 (530)
.+|+++.||-+...... .....+|+ +.|-.++.+++|-+|+|.+.. .+.++..+|+..++
T Consensus 27 ~~vv~i~gg~~~~~g~~---~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--------------~~~~~~~~d~~~~~ 89 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSH---RQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--------------LGFEGIDADIAAAI 89 (274)
T ss_pred CeEEEEeCCccccCCch---hHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------CCHHHHHHHHHHHH
Confidence 46777777654322111 11233444 347899999999999986311 24567889999999
Q ss_pred HHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 183 ~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+.+++... .-.+++++|.|.||.++..+... |+.+.|.+.-|+++
T Consensus 90 ~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 90 DAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred HHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 99986542 12469999999999998887654 56688888777654
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=96.70 E-value=0.0052 Score=66.23 Aligned_cols=107 Identities=17% Similarity=0.170 Sum_probs=69.8
Q ss_pred CCcEEEEeCCCCCcc-cccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIE-WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~-~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
..|++|+.||-+... ..+ ........+.|-.|+.++.|-+|+|...+- + .+... ..++ .+.
T Consensus 193 ~~P~Vli~gG~~~~~~~~~---~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~------~-~d~~~--~~~a------vld 254 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYY---RLFRDYLAPRGIAMLTIDMPSVGFSSKWKL------T-QDSSL--LHQA------VLN 254 (414)
T ss_pred CccEEEEeCCcccchhhhH---HHHHHHHHhCCCEEEEECCCCCCCCCCCCc------c-ccHHH--HHHH------HHH
Confidence 379999998865421 111 112333346689999999999999865321 1 11100 0122 223
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
.++..-..+..++.++|.|+||.+|..+-.++|+.+.|.|+-++|+
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 3332212244699999999999999999999999999999888776
No 55
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.67 E-value=0.01 Score=60.43 Aligned_cols=83 Identities=27% Similarity=0.385 Sum_probs=68.4
Q ss_pred cCCeEEeeeceeeecCCCCCCccccccCCCcccCC-CHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHH
Q 009631 135 FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYL-TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 135 ~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yL-t~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~ 213 (530)
.|-.|+++.||-+|.|. .+ + .|. +.+-...|+..|.+.++..-..+.-|..++|.|.|||++--+..
T Consensus 81 ~g~~v~a~D~~GhG~Sd---Gl-----~----~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~ 148 (313)
T KOG1455|consen 81 SGFAVYAIDYEGHGRSD---GL-----H----AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIAL 148 (313)
T ss_pred CCCeEEEeeccCCCcCC---CC-----c----ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHh
Confidence 46789999999999997 22 1 133 34678899999999988765556789999999999999999999
Q ss_pred HcCceeEEEEecccccc
Q 009631 214 KYPHIAIGALASSAPIL 230 (530)
Q Consensus 214 kYP~lv~gavASSApv~ 230 (530)
|.|+..+|++. +||+.
T Consensus 149 k~p~~w~G~il-vaPmc 164 (313)
T KOG1455|consen 149 KDPNFWDGAIL-VAPMC 164 (313)
T ss_pred hCCccccccee-eeccc
Confidence 99999999988 55765
No 56
>PRK07581 hypothetical protein; Validated
Probab=96.58 E-value=0.007 Score=62.79 Aligned_cols=85 Identities=16% Similarity=0.206 Sum_probs=52.2
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCC-EEEEecchhHHHHHHHHHH
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASP-VVLFGGSYGGMLAAWMRLK 214 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~p-wI~~GGSY~GaLAaW~R~k 214 (530)
+--||++..|-||.|.+..+....+ +.+.+...+.. .|++.....+...+.. .+ .+++|+|+||++|..+-..
T Consensus 71 ~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 71 KYFIIIPNMFGNGLSSSPSNTPAPF-NAARFPHVTIY---DNVRAQHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred ceEEEEecCCCCCCCCCCCCCCCCC-CCCCCCceeHH---HHHHHHHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHHH
Confidence 4689999999999996432100001 23333334442 3333322222222221 46 5899999999999999999
Q ss_pred cCceeEEEEecc
Q 009631 215 YPHIAIGALASS 226 (530)
Q Consensus 215 YP~lv~gavASS 226 (530)
||+.+.+-+.-+
T Consensus 145 ~P~~V~~Lvli~ 156 (339)
T PRK07581 145 YPDMVERAAPIA 156 (339)
T ss_pred CHHHHhhheeee
Confidence 999988765443
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.52 E-value=0.012 Score=61.75 Aligned_cols=87 Identities=15% Similarity=0.225 Sum_probs=65.3
Q ss_pred hhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHH-HHHHHHHHHHhhhcCCCCCCEEEEecchh
Q 009631 126 GFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQAL-ADFAVFITNLKQNLSAEASPVVLFGGSYG 204 (530)
Q Consensus 126 g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QAL-aDla~Fi~~~k~~~~~~~~pwI~~GGSY~ 204 (530)
.+...+++ .|-.|+.+.+|.+|.|.. ..+.+.-+ .|+...++.+++... ..|++++|.|+|
T Consensus 85 ~~~~~L~~-~G~~V~~~D~~g~g~s~~---------------~~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~G 146 (350)
T TIGR01836 85 SLVRGLLE-RGQDVYLIDWGYPDRADR---------------YLTLDDYINGYIDKCVDYICRTSK--LDQISLLGICQG 146 (350)
T ss_pred hHHHHHHH-CCCeEEEEeCCCCCHHHh---------------cCCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHH
Confidence 34444444 577899999998876531 23444444 447777888876653 358999999999
Q ss_pred HHHHHHHHHHcCceeEEEEecccccc
Q 009631 205 GMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 205 GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
|++++.+-.++|+.+.+.+..++|+.
T Consensus 147 G~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 147 GTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHhCchheeeEEEeccccc
Confidence 99999999999999999888888874
No 58
>PRK05855 short chain dehydrogenase; Validated
Probab=96.51 E-value=0.0055 Score=67.81 Aligned_cols=79 Identities=20% Similarity=0.155 Sum_probs=57.6
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHH--HH
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWM--RL 213 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~--R~ 213 (530)
+-.||.+++|-||.|.+... -.-.|.++..+|++.+++.++. ..|++++|+|+||+++.-+ +.
T Consensus 51 ~~~Vi~~D~~G~G~S~~~~~----------~~~~~~~~~a~dl~~~i~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 51 RFRVVAYDVRGAGRSSAPKR----------TAAYTLARLADDFAAVIDAVSP-----DRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred ceEEEEecCCCCCCCCCCCc----------ccccCHHHHHHHHHHHHHHhCC-----CCcEEEEecChHHHHHHHHHhCc
Confidence 46899999999999974332 1246899999999999997652 3579999999999777433 23
Q ss_pred HcCceeEEEEeccccc
Q 009631 214 KYPHIAIGALASSAPI 229 (530)
Q Consensus 214 kYP~lv~gavASSApv 229 (530)
.+|+.+.+..+.++|.
T Consensus 116 ~~~~~v~~~~~~~~~~ 131 (582)
T PRK05855 116 RAAGRIASFTSVSGPS 131 (582)
T ss_pred cchhhhhhheeccCCc
Confidence 4566666665555554
No 59
>PRK11460 putative hydrolase; Provisional
Probab=96.43 E-value=0.019 Score=56.70 Aligned_cols=60 Identities=22% Similarity=0.170 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 170 t~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
.++.+++++..+++.+..++..+..+++++|.|.||++|.++-.++|+.+.+.++-|+.+
T Consensus 79 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 79 RVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 345666777777777776666666789999999999999999999999988877766654
No 60
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.42 E-value=0.006 Score=58.49 Aligned_cols=103 Identities=23% Similarity=0.211 Sum_probs=69.8
Q ss_pred EEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhh
Q 009631 108 IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQ 187 (530)
Q Consensus 108 Ifl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~ 187 (530)
||++-||=+-.........+...+|++.|..++.+++|-. | + . +..+++.|+...++.+.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----p--~---------~----~~p~~~~D~~~a~~~l~~ 61 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----P--E---------A----PFPAALEDVKAAYRWLLK 61 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----T--T---------S----STTHHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----c--c---------c----cccccccccccceeeecc
Confidence 4566666654332222234566899999999999999942 2 1 1 235789999999999886
Q ss_pred h---cCCCCCCEEEEecchhHHHHHHHHHHcCce----eEEEEeccccc
Q 009631 188 N---LSAEASPVVLFGGSYGGMLAAWMRLKYPHI----AIGALASSAPI 229 (530)
Q Consensus 188 ~---~~~~~~pwI~~GGSY~GaLAaW~R~kYP~l----v~gavASSApv 229 (530)
+ ++.+..+++++|.|-||.||+.+-....+. +.+.+..|++.
T Consensus 62 ~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 62 NADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp THHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 5 455567999999999999999888766554 66777766543
No 61
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=96.38 E-value=0.014 Score=67.34 Aligned_cols=103 Identities=19% Similarity=0.245 Sum_probs=64.8
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhc---CCeEEeeeceeeecCCCCCCccc-cccCCCcccCC----------C
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRF---GAMLVFPEHRYYGESMPYGSTEV-AYQNATTLSYL----------T 170 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~---ga~vv~lEHRyYG~S~P~~~l~~-~~~st~nL~yL----------t 170 (530)
+.|+++++-|=+... ..+..+|+.+ |-.+|.++||.||+|.--.+.+. +-++..-+-|+ +
T Consensus 448 g~P~VVllHG~~g~~------~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGITGAK------ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCcEEEEeCCCCCCH------HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 346666665544321 1233444443 56799999999999943211000 00011223453 4
Q ss_pred HHHHHHHHHHHHHHHh------hhc----CCCCCCEEEEecchhHHHHHHHHH
Q 009631 171 AEQALADFAVFITNLK------QNL----SAEASPVVLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 171 ~~QALaDla~Fi~~~k------~~~----~~~~~pwI~~GGSY~GaLAaW~R~ 213 (530)
.+|++.|+..++..++ ..+ ..+..|+.++|+|.||.++.-+-.
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 5999999999999998 221 134679999999999999998773
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=96.38 E-value=0.0075 Score=53.64 Aligned_cols=93 Identities=23% Similarity=0.271 Sum_probs=61.4
Q ss_pred cEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHh
Q 009631 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (530)
Q Consensus 107 PIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k 186 (530)
||++.-|+=++...+ ..+...+|++ |-.++.+++|+.|.+. . .+ ..+++|+++.
T Consensus 1 ~vv~~HG~~~~~~~~---~~~~~~l~~~-G~~v~~~~~~~~~~~~---~-------~~-----~~~~~~~~~~------- 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY---QPLAEALAEQ-GYAVVAFDYPGHGDSD---G-------AD-----AVERVLADIR------- 54 (145)
T ss_dssp EEEEECTTTTTTHHH---HHHHHHHHHT-TEEEEEESCTTSTTSH---H-------SH-----HHHHHHHHHH-------
T ss_pred CEEEECCCCCCHHHH---HHHHHHHHHC-CCEEEEEecCCCCccc---h-------hH-----HHHHHHHHHH-------
Confidence 456666654432221 2344567776 9999999999999871 1 11 3334444433
Q ss_pred hhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 187 ~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
+... +..+++++|.|.||.+++.+-.+. ..+.+.++-++
T Consensus 55 ~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 55 AGYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred hhcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 2222 456999999999999999999999 56666666665
No 63
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.30 E-value=0.021 Score=59.70 Aligned_cols=89 Identities=17% Similarity=0.236 Sum_probs=61.2
Q ss_pred cCCeEEeeecee--eecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCC-EEEEecchhHHHHHHH
Q 009631 135 FGAMLVFPEHRY--YGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASP-VVLFGGSYGGMLAAWM 211 (530)
Q Consensus 135 ~ga~vv~lEHRy--YG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~p-wI~~GGSY~GaLAaW~ 211 (530)
-+-.||.+.||- +|.|.|-+.......-..+.--.|+++..+|++.+++.+.. .+ .+++|+|+||++|.-+
T Consensus 71 ~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~l~G~S~Gg~ia~~~ 144 (351)
T TIGR01392 71 DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI------EQIAAVVGGSMGGMQALEW 144 (351)
T ss_pred CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC------CCceEEEEECHHHHHHHHH
Confidence 356999999998 77776632100000000011236788888888888876532 35 9999999999999999
Q ss_pred HHHcCceeEEEEeccccc
Q 009631 212 RLKYPHIAIGALASSAPI 229 (530)
Q Consensus 212 R~kYP~lv~gavASSApv 229 (530)
-.+||+.+.+.+..+++.
T Consensus 145 a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 145 AIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHChHhhheEEEEccCC
Confidence 999999998877765543
No 64
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.21 E-value=0.027 Score=58.84 Aligned_cols=145 Identities=19% Similarity=0.319 Sum_probs=103.5
Q ss_pred CceeeEEEeecCCCC----CCCCCcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchh-HhhcchhcCCeEEe
Q 009631 67 RYETRYFEQRLDHFS----FADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGF-VWDIAPRFGAMLVF 141 (530)
Q Consensus 67 ~~~~~~f~Q~lDHFn----~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~-~~~lA~~~ga~vv~ 141 (530)
...++.|+-|++|.= |...++=.-+|. -.+-|+. +.+||.+.+.|-|+.. ++-...+ ...|+++ |-.-+.
T Consensus 52 ~~~eG~F~SP~~~~~~~~lP~es~~a~~~~~-~P~~~~~--~~rp~~IhLagTGDh~-f~rR~~l~a~pLl~~-gi~s~~ 126 (348)
T PF09752_consen 52 KIREGEFRSPLAFYLPGLLPEESRTARFQLL-LPKRWDS--PYRPVCIHLAGTGDHG-FWRRRRLMARPLLKE-GIASLI 126 (348)
T ss_pred EEEEeEeCCchhhhccccCChhHhheEEEEE-ECCcccc--CCCceEEEecCCCccc-hhhhhhhhhhHHHHc-CcceEE
Confidence 356889999987642 333344333343 3555533 3489999999999854 3333344 4588888 999999
Q ss_pred eeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeE
Q 009631 142 PEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAI 220 (530)
Q Consensus 142 lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~ 220 (530)
||.=|||.=+|-...-.++.++.+| ++=..|.+.+.+.....++.+ + -.|+.+.|-|.||.+|+-.-..+|.-+.
T Consensus 127 le~Pyyg~RkP~~Q~~s~l~~VsDl-~~~g~~~i~E~~~Ll~Wl~~~-G--~~~~g~~G~SmGG~~A~laa~~~p~pv~ 201 (348)
T PF09752_consen 127 LENPYYGQRKPKDQRRSSLRNVSDL-FVMGRATILESRALLHWLERE-G--YGPLGLTGISMGGHMAALAASNWPRPVA 201 (348)
T ss_pred EecccccccChhHhhcccccchhHH-HHHHhHHHHHHHHHHHHHHhc-C--CCceEEEEechhHhhHHhhhhcCCCcee
Confidence 9999999999965532233344444 233378888999999998876 3 3599999999999999999999998654
No 65
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.17 E-value=0.042 Score=58.43 Aligned_cols=142 Identities=20% Similarity=0.196 Sum_probs=87.3
Q ss_pred CcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCC------CCc---
Q 009631 86 PTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPY------GST--- 156 (530)
Q Consensus 86 ~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~------~~l--- 156 (530)
|+=+-.|-+..+--+ +..-|+++|||=|.-.....-.-....+|++++.++|.+-.=-+|.=..+ .+.
T Consensus 18 R~sKLEyri~ydd~K---e~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~ 94 (403)
T PF11144_consen 18 RESKLEYRISYDDEK---EIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKE 94 (403)
T ss_pred ccceeeEEeecCCCC---CceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHH
Confidence 455556666433333 34569999999985432111122345889999999998876555522111 110
Q ss_pred --ccccc----CCCccc-CCCHHHHHHHHHHHHHHHh-------------------------------------------
Q 009631 157 --EVAYQ----NATTLS-YLTAEQALADFAVFITNLK------------------------------------------- 186 (530)
Q Consensus 157 --~~~~~----st~nL~-yLt~~QALaDla~Fi~~~k------------------------------------------- 186 (530)
+.+++ +.+++. +-+..+.+..+...|..+|
T Consensus 95 iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~ 174 (403)
T PF11144_consen 95 ILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLK 174 (403)
T ss_pred HHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHH
Confidence 01110 011122 1345555666666665554
Q ss_pred hhcCC-C-CCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 187 QNLSA-E-ASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 187 ~~~~~-~-~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
+.+.. . +-|+|+.||||||=||--..+.-|++|.|.+=-||-++
T Consensus 175 k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 175 KIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 22221 1 35999999999999999999999999999999998875
No 66
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.17 E-value=0.017 Score=58.71 Aligned_cols=107 Identities=14% Similarity=0.025 Sum_probs=67.5
Q ss_pred CCcEEEEeCCCCCcc-cccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIE-WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~-~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
++|+++++-|-+... ..+. .-+...+.++.+..||++.-|.++.+ .+.. .-.+++..-+|++.|++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~-~~l~~~ll~~~~~nVi~vD~~~~~~~-~y~~-----------a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWI-SDLRKAYLSRGDYNVIVVDWGRGANP-NYPQ-----------AVNNTRVVGAELAKFLD 101 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHH-HHHHHHHHhcCCCEEEEEECcccccc-ChHH-----------HHHhHHHHHHHHHHHHH
Confidence 467666666543211 1110 11112233445788999998765321 1111 11245566678899999
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEe
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA 224 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavA 224 (530)
.+.........+++++|.|+||.+|..+-..+|+.+...++
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~ 142 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITG 142 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEE
Confidence 88876544456899999999999999999999987665544
No 67
>PRK10162 acetyl esterase; Provisional
Probab=96.05 E-value=0.026 Score=58.57 Aligned_cols=94 Identities=17% Similarity=0.160 Sum_probs=59.4
Q ss_pred CCcEEEEe-CCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 105 LGPIFLYC-GNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 105 ~gPIfl~~-gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
+.|+++|+ ||=+-.........+...+|++.|..||.++.|=-.+ .|+ .+++.|+...++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape-~~~------------------p~~~~D~~~a~~ 140 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPE-ARF------------------PQAIEEIVAVCC 140 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCC-CCC------------------CCcHHHHHHHHH
Confidence 35766655 4332222111122345689999999999999883111 111 125566666666
Q ss_pred HHhh---hcCCCCCCEEEEecchhHHHHHHHHHHcCc
Q 009631 184 NLKQ---NLSAEASPVVLFGGSYGGMLAAWMRLKYPH 217 (530)
Q Consensus 184 ~~k~---~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~ 217 (530)
++.+ .++.+..++++.|.|.||.||+++-+...+
T Consensus 141 ~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~ 177 (318)
T PRK10162 141 YFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRD 177 (318)
T ss_pred HHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHh
Confidence 6553 355556799999999999999998876643
No 68
>PRK10115 protease 2; Provisional
Probab=95.93 E-value=0.018 Score=66.03 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=72.9
Q ss_pred CcEEEEe-CCCCCc-ccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 106 GPIFLYC-GNEGDI-EWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 106 gPIfl~~-gGE~~~-~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
.|++|++ ||-+.. .+.+. ..+..|+. -|..++..--|-=| =++.. | .+.-+.+.=.+...|+..-++
T Consensus 445 ~P~ll~~hGg~~~~~~p~f~--~~~~~l~~-rG~~v~~~n~RGs~---g~G~~---w--~~~g~~~~k~~~~~D~~a~~~ 513 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADFS--FSRLSLLD-RGFVYAIVHVRGGG---ELGQQ---W--YEDGKFLKKKNTFNDYLDACD 513 (686)
T ss_pred CCEEEEEECCCCCCCCCCcc--HHHHHHHH-CCcEEEEEEcCCCC---ccCHH---H--HHhhhhhcCCCcHHHHHHHHH
Confidence 5888875 433322 11111 11234454 37788877777522 12211 1 011123333467889988888
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
++..+--.+..++.+.||||||-|++|.--.+|++|.|+|+..+++
T Consensus 514 ~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 514 ALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred HHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 8876533456799999999999999999999999999999987665
No 69
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.72 E-value=0.024 Score=62.11 Aligned_cols=113 Identities=18% Similarity=0.168 Sum_probs=75.0
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcC-CeEEeeecee--eecCCCCCCccccccCCCcccCCCHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFG-AMLVFPEHRY--YGESMPYGSTEVAYQNATTLSYLTAEQALADFAVF 181 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~g-a~vv~lEHRy--YG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~F 181 (530)
..||++++=|-+-..+..... ....+|++.+ ..+|.+.+|- +|- + ++..+ -.+-..+|.|...-
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~------~-----~~~~~-~~~~n~g~~D~~~a 160 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGF------L-----STGDI-ELPGNYGLKDQRLA 160 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEeccccccccc------c-----cCCCC-CCCcchhHHHHHHH
Confidence 479999986655332211111 2345666665 8999999993 221 1 11111 12334567888888
Q ss_pred HHHHhhh---cCCCCCCEEEEecchhHHHHHHHHHH--cCceeEEEEecccccc
Q 009631 182 ITNLKQN---LSAEASPVVLFGGSYGGMLAAWMRLK--YPHIAIGALASSAPIL 230 (530)
Q Consensus 182 i~~~k~~---~~~~~~pwI~~GGSY~GaLAaW~R~k--YP~lv~gavASSApv~ 230 (530)
++.+++. ++.+..++.++|.|+||.++.+.... .+.+|.++|.-|++..
T Consensus 161 l~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 161 LKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 8777754 45567799999999999999988776 4678999999888764
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.63 E-value=0.11 Score=56.47 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=57.6
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
+..||++..|-+|.|. +.. +.. .++.+-+|++.|++.+...+..+-.++.++|.|.||.+|..+-..+
T Consensus 73 d~nVI~VDw~g~g~s~-y~~------a~~-----~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 73 SANVIVVDWLSRAQQH-YPT------SAA-----YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred CCEEEEEECCCcCCCC-Ccc------ccc-----cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC
Confidence 5899999999999763 332 111 2366668999999998765554457899999999999999999999
Q ss_pred CceeEE
Q 009631 216 PHIAIG 221 (530)
Q Consensus 216 P~lv~g 221 (530)
|+.+..
T Consensus 141 p~rV~r 146 (442)
T TIGR03230 141 KHKVNR 146 (442)
T ss_pred CcceeE
Confidence 987653
No 71
>PLN00021 chlorophyllase
Probab=95.36 E-value=0.069 Score=55.48 Aligned_cols=111 Identities=19% Similarity=0.208 Sum_probs=58.8
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
..|+++++=|-+.....+ ..+...+|+ .|..||+.+|+-++.+. . ...+ ...++++..+...++.
T Consensus 51 ~~PvVv~lHG~~~~~~~y--~~l~~~Las-~G~~VvapD~~g~~~~~---~-------~~~i--~d~~~~~~~l~~~l~~ 115 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFY--SQLLQHIAS-HGFIVVAPQLYTLAGPD---G-------TDEI--KDAAAVINWLSSGLAA 115 (313)
T ss_pred CCCEEEEECCCCCCcccH--HHHHHHHHh-CCCEEEEecCCCcCCCC---c-------hhhH--HHHHHHHHHHHhhhhh
Confidence 367777765543221111 233445554 48899999987643211 1 1111 1122222222211111
Q ss_pred H-hhhcCCCCCCEEEEecchhHHHHHHHHHHcCcee----EEEEecccccc
Q 009631 185 L-KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIA----IGALASSAPIL 230 (530)
Q Consensus 185 ~-k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv----~gavASSApv~ 230 (530)
+ ......+-.+++++|+|+||.+|..+-.++|+.. ..++....|+.
T Consensus 116 ~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 116 VLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 1 1112223358999999999999999999999754 34445555653
No 72
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.27 E-value=0.048 Score=51.17 Aligned_cols=100 Identities=23% Similarity=0.291 Sum_probs=67.4
Q ss_pred cEEEEeCCCCCcccccccchhHhhcchhcC-CeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHH
Q 009631 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFG-AMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (530)
Q Consensus 107 PIfl~~gGE~~~~~~~~~~g~~~~lA~~~g-a~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~ 185 (530)
||++.-|+.+....+.. ....+++... -.++.+.-|-+|.|.+. .. +..++ .+|+..|++.+
T Consensus 23 ~i~~~hg~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~g~g~s~~~-~~-----~~~~~--------~~~~~~~~~~~ 85 (282)
T COG0596 23 PLVLLHGFPGSSSVWRP---VFKVLPALAARYRVIAPDLRGHGRSDPA-GY-----SLSAY--------ADDLAALLDAL 85 (282)
T ss_pred eEEEeCCCCCchhhhHH---HHHHhhccccceEEEEecccCCCCCCcc-cc-----cHHHH--------HHHHHHHHHHh
Confidence 78888887765432211 1122222222 68999999999998611 00 11121 77788887754
Q ss_pred hhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 186 k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
.. .+++++|.|+||.++..+..++|+.+.+.+.-+++.
T Consensus 86 ~~------~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 86 GL------EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred CC------CceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 42 249999999999999999999999888887777665
No 73
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.14 E-value=0.095 Score=54.08 Aligned_cols=98 Identities=26% Similarity=0.312 Sum_probs=76.5
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
.-|++++-|==|+... ...+-..++++++.-++.++=|=.|.| |.- .-++-+-+-+|+..||..
T Consensus 52 ~Pp~i~lHGl~GS~~N---w~sv~k~Ls~~l~~~v~~vd~RnHG~S-p~~------------~~h~~~~ma~dv~~Fi~~ 115 (315)
T KOG2382|consen 52 APPAIILHGLLGSKEN---WRSVAKNLSRKLGRDVYAVDVRNHGSS-PKI------------TVHNYEAMAEDVKLFIDG 115 (315)
T ss_pred CCceEEecccccCCCC---HHHHHHHhcccccCceEEEecccCCCC-ccc------------cccCHHHHHHHHHHHHHH
Confidence 3578888775555432 245667999999999999999999976 322 233477788999999999
Q ss_pred HhhhcCCCCCCEEEEecchhH-HHHHHHHHHcCceeE
Q 009631 185 LKQNLSAEASPVVLFGGSYGG-MLAAWMRLKYPHIAI 220 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~G-aLAaW~R~kYP~lv~ 220 (530)
++... ...|.++.|+|.|| -+++-.-.++|+.+-
T Consensus 116 v~~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~ 150 (315)
T KOG2382|consen 116 VGGST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIE 150 (315)
T ss_pred ccccc--ccCCceecccCcchHHHHHHHHHhcCcccc
Confidence 88653 24699999999999 888899999999843
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=94.98 E-value=0.047 Score=52.90 Aligned_cols=80 Identities=24% Similarity=0.222 Sum_probs=53.1
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCe---EEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAM---LVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~---vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi 182 (530)
.|||++-||.|.+.. ...||+.+... |+.+|+...+... -..-|+++.+++++.-|
T Consensus 1 ~~lf~~p~~gG~~~~-------y~~la~~l~~~~~~v~~i~~~~~~~~~--------------~~~~si~~la~~y~~~I 59 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS-------YRPLARALPDDVIGVYGIEYPGRGDDE--------------PPPDSIEELASRYAEAI 59 (229)
T ss_dssp -EEEEESSTTCSGGG-------GHHHHHHHTTTEEEEEEECSTTSCTTS--------------HEESSHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHH-------HHHHHHhCCCCeEEEEEEecCCCCCCC--------------CCCCCHHHHHHHHHHHh
Confidence 489999999986654 35666666654 7777766555211 12467788777766555
Q ss_pred HHHhhhcCCCCCCEEEEecchhHHHHHHH
Q 009631 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWM 211 (530)
Q Consensus 183 ~~~k~~~~~~~~pwI~~GGSY~GaLAaW~ 211 (530)
+... ++.|.+++|.|+||.||-=+
T Consensus 60 ~~~~-----~~gp~~L~G~S~Gg~lA~E~ 83 (229)
T PF00975_consen 60 RARQ-----PEGPYVLAGWSFGGILAFEM 83 (229)
T ss_dssp HHHT-----SSSSEEEEEETHHHHHHHHH
T ss_pred hhhC-----CCCCeeehccCccHHHHHHH
Confidence 4322 23599999999999998744
No 75
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=94.29 E-value=0.052 Score=61.63 Aligned_cols=108 Identities=20% Similarity=0.310 Sum_probs=70.6
Q ss_pred cEEEE-eCCCCCcccccccchhH--hhcchhcCCeEEeeece---eeecCCCCCCccccccCCCcccCCCHHHHHHHHHH
Q 009631 107 PIFLY-CGNEGDIEWFAVNSGFV--WDIAPRFGAMLVFPEHR---YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAV 180 (530)
Q Consensus 107 PIfl~-~gGE~~~~~~~~~~g~~--~~lA~~~ga~vv~lEHR---yYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~ 180 (530)
|++++ -||....... ++. ...--..|.+||+..-| -||+...... -..+... .++|+..
T Consensus 395 P~i~~~hGGP~~~~~~----~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~-------~~~~g~~----~~~D~~~ 459 (620)
T COG1506 395 PLIVYIHGGPSAQVGY----SFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAI-------RGDWGGV----DLEDLIA 459 (620)
T ss_pred CEEEEeCCCCcccccc----ccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhh-------hhccCCc----cHHHHHH
Confidence 76655 5765332221 222 23344568899999988 6666533211 1122223 3456666
Q ss_pred HHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 181 FITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 181 Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
.++.+++.-..+..++.++||||||=|+.|.-.+.| .+.++++..+++.
T Consensus 460 ~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 460 AVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred HHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 666555443345569999999999999999999999 9999999998885
No 76
>PLN02872 triacylglycerol lipase
Probab=94.06 E-value=0.19 Score=53.97 Aligned_cols=105 Identities=18% Similarity=0.132 Sum_probs=67.2
Q ss_pred CcEEEEeCCCCCcccccc---cchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAV---NSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~---~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi 182 (530)
.||+|+-|.......+.. ..++...+|+ .|-.|+..+-|=+|.|..-..+.. .+.+-+.|---++|+.|+..++
T Consensus 75 ~~Vll~HGl~~ss~~w~~~~~~~sla~~La~-~GydV~l~n~RG~~~s~gh~~~~~--~~~~fw~~s~~e~a~~Dl~a~i 151 (395)
T PLN02872 75 PPVLLQHGLFMAGDAWFLNSPEQSLGFILAD-HGFDVWVGNVRGTRWSYGHVTLSE--KDKEFWDWSWQELALYDLAEMI 151 (395)
T ss_pred CeEEEeCcccccccceeecCcccchHHHHHh-CCCCcccccccccccccCCCCCCc--cchhccCCcHHHHHHHHHHHHH
Confidence 478888876654433221 1234445564 577999999998776653222200 0122234433467789999999
Q ss_pred HHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCc
Q 009631 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH 217 (530)
Q Consensus 183 ~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~ 217 (530)
+++.+.- ..|++++|+|.||+++. ....+|+
T Consensus 152 d~i~~~~---~~~v~~VGhS~Gg~~~~-~~~~~p~ 182 (395)
T PLN02872 152 HYVYSIT---NSKIFIVGHSQGTIMSL-AALTQPN 182 (395)
T ss_pred HHHHhcc---CCceEEEEECHHHHHHH-HHhhChH
Confidence 9997532 35899999999998875 5556787
No 77
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=93.92 E-value=0.07 Score=52.57 Aligned_cols=50 Identities=22% Similarity=0.352 Sum_probs=40.8
Q ss_pred HHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 180 VFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 180 ~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+++..|++++.....++.+.|.|+||..|.++..+||++|.++++-|+.+
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 34555666666444459999999999999999999999999999999654
No 78
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=93.86 E-value=0.24 Score=50.90 Aligned_cols=91 Identities=27% Similarity=0.333 Sum_probs=62.1
Q ss_pred CCcEEEEeCCCCCccccc-ccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFA-VNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~-~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
+.|++||+-|=|-+.... ....+...++...|+.||.+..|.--+- ||+. ++.|+..=.+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p~------------------~~~d~~~a~~ 138 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-PFPA------------------ALEDAYAAYR 138 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-CCCc------------------hHHHHHHHHH
Confidence 478888876655443222 2335678999999999999999965433 3332 3445443333
Q ss_pred HHh---hhcCCCCCCEEEEecchhHHHHHHHHHH
Q 009631 184 NLK---QNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (530)
Q Consensus 184 ~~k---~~~~~~~~pwI~~GGSY~GaLAaW~R~k 214 (530)
.+. .+++.+..++++.|.|-||.||+.+-+.
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~ 172 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALA 172 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHH
Confidence 333 2566777899999999999999987644
No 79
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=93.17 E-value=0.12 Score=50.63 Aligned_cols=158 Identities=20% Similarity=0.243 Sum_probs=93.7
Q ss_pred CCcEEEEeC-CCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCG-NEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 105 ~gPIfl~~g-GE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
..|-+||.- +-|++..... ...-+=..++..|+.++-|-||+|.-.+. -+-| +|.++-||.
T Consensus 77 S~pTlLyfh~NAGNmGhr~~---i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-------E~GL-~lDs~avld------- 138 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLP---IARVFYVNLKMNVLIVSYRGYGKSEGSPS-------EEGL-KLDSEAVLD------- 138 (300)
T ss_pred CCceEEEEccCCCcccchhh---HHHHHHHHcCceEEEEEeeccccCCCCcc-------ccce-eccHHHHHH-------
Confidence 378777754 4444432221 12344567899999999999999974332 2233 556555543
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEe----cccccccccCCCCcchhhHHHhhhhccCChhhHHH
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA----SSAPILQFEDIVPPETFYNIVSSDFKRESASCFNT 259 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavA----SSApv~a~~~~~df~~y~~~V~~~~~~~~~~C~~~ 259 (530)
++-..--.++.|.|+||-|-|||.|.....|.-|.+.|++- +|=|-.+..- +.-| .+ +..+.-|.++
T Consensus 139 yl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~---v~p~--~~----k~i~~lc~kn 209 (300)
T KOG4391|consen 139 YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL---VFPF--PM----KYIPLLCYKN 209 (300)
T ss_pred HHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe---eccc--hh----hHHHHHHHHh
Confidence 33333344678999999999999999998898888877654 2222211100 0000 01 2235679998
Q ss_pred HHHHHHHHHHh-----hcCc--cc---HHHHHHHcccccC
Q 009631 260 IKESWGELVSV-----GQKE--NG---LLELTKTFHLCRE 289 (530)
Q Consensus 260 i~~~~~~i~~l-----~~~~--~~---~~~lk~~F~lc~~ 289 (530)
+....+.|.+- +-++ +. -..++++|.+|+.
T Consensus 210 ~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S 249 (300)
T KOG4391|consen 210 KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPS 249 (300)
T ss_pred hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCch
Confidence 88888777632 1111 11 1346777888853
No 80
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=93.14 E-value=0.53 Score=49.96 Aligned_cols=88 Identities=18% Similarity=0.218 Sum_probs=57.6
Q ss_pred CCeEEeeecee--eecCCCCCCccccccC-CCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCC-EEEEecchhHHHHHHH
Q 009631 136 GAMLVFPEHRY--YGESMPYGSTEVAYQN-ATTLSYLTAEQALADFAVFITNLKQNLSAEASP-VVLFGGSYGGMLAAWM 211 (530)
Q Consensus 136 ga~vv~lEHRy--YG~S~P~~~l~~~~~s-t~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~p-wI~~GGSY~GaLAaW~ 211 (530)
+--||.+..|- .|.|.|-......-+. ..+..-.|.+.-.+|+..|++++.. .+ .+++|.|+||++|..+
T Consensus 91 ~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~------~~~~~lvG~S~Gg~ia~~~ 164 (379)
T PRK00175 91 RYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI------TRLAAVVGGSMGGMQALEW 164 (379)
T ss_pred ceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC------CCceEEEEECHHHHHHHHH
Confidence 45799999874 3444442110000000 0011135888888999999887653 35 4899999999999999
Q ss_pred HHHcCceeEEEEeccccc
Q 009631 212 RLKYPHIAIGALASSAPI 229 (530)
Q Consensus 212 R~kYP~lv~gavASSApv 229 (530)
..+||+.+.+.+.-++..
T Consensus 165 a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 165 AIDYPDRVRSALVIASSA 182 (379)
T ss_pred HHhChHhhhEEEEECCCc
Confidence 999999988777655443
No 81
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.69 E-value=0.43 Score=48.77 Aligned_cols=109 Identities=18% Similarity=0.261 Sum_probs=72.5
Q ss_pred CCcEE-EEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCC---------HHHH
Q 009631 105 LGPIF-LYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLT---------AEQA 174 (530)
Q Consensus 105 ~gPIf-l~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt---------~~QA 174 (530)
+.|++ ++-|+-++......-+| +..+|.+.|=+|++.|- |..+.+ .|.+... ++.
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg-~d~lAd~~gFlV~yPdg--~~~~wn-----------~~~~~~~~~p~~~~~g~dd- 124 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTG-WDALADREGFLVAYPDG--YDRAWN-----------ANGCGNWFGPADRRRGVDD- 124 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccc-hhhhhcccCcEEECcCc--cccccC-----------CCcccccCCcccccCCccH-
Confidence 34644 44566666554332233 67999999999999831 222221 1222222 222
Q ss_pred HHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEE--Eecccc
Q 009631 175 LADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGA--LASSAP 228 (530)
Q Consensus 175 LaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~ga--vASSAp 228 (530)
+.+|+..+..+..++..+...+.+.|=|=||.||.++.-.||++|.|. ||+..|
T Consensus 125 Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~ 180 (312)
T COG3509 125 VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLA 180 (312)
T ss_pred HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccC
Confidence 355666667777888888899999999999999999999999999743 444433
No 82
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=92.63 E-value=0.5 Score=49.11 Aligned_cols=124 Identities=24% Similarity=0.235 Sum_probs=83.9
Q ss_pred CcEeeEEEEeccccCCCCCCCc-EEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCC
Q 009631 86 PTFSQRYLINTDHWVGPNRLGP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNAT 164 (530)
Q Consensus 86 ~TF~QRY~~n~~~~~~~~~~gP-Ifl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~ 164 (530)
+-|.-=.|+.+..- +..| |+++-|=||....-.. .| +.+-+.+-|=.+|.+-=|-.|.+--.... + ..
T Consensus 59 g~~~~ldw~~~p~~----~~~P~vVl~HGL~G~s~s~y~-r~-L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~---~-yh- 127 (345)
T COG0429 59 GGFIDLDWSEDPRA----AKKPLVVLFHGLEGSSNSPYA-RG-LMRALSRRGWLVVVFHFRGCSGEANTSPR---L-YH- 127 (345)
T ss_pred CCEEEEeeccCccc----cCCceEEEEeccCCCCcCHHH-HH-HHHHHHhcCCeEEEEecccccCCcccCcc---e-ec-
Confidence 44555566665431 2366 6677787886643222 23 34556666789999999998876532111 0 00
Q ss_pred cccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhH-HHHHHHHHHcCc-eeEEEEeccccc
Q 009631 165 TLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGG-MLAAWMRLKYPH-IAIGALASSAPI 229 (530)
Q Consensus 165 nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~G-aLAaW~R~kYP~-lv~gavASSApv 229 (530)
..+| +|++.|...+++... ..|...+|.|.|| |||-|.-++==+ ...||++.|+|.
T Consensus 128 --~G~t-----~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 128 --SGET-----EDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred --ccch-----hHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 1233 999999999998543 5799999999999 888898766544 347999999998
No 83
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.61 E-value=0.64 Score=49.73 Aligned_cols=110 Identities=19% Similarity=0.169 Sum_probs=76.6
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
..|+++++.|=..-+.... --.+...|++-|--+|.+-||--|.|.-+.... ..+-. -.|+..++++
T Consensus 124 ~~P~vvilpGltg~S~~~Y-Vr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~--------f~ag~----t~Dl~~~v~~ 190 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESY-VRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL--------FTAGW----TEDLREVVNH 190 (409)
T ss_pred CCcEEEEecCCCCCChhHH-HHHHHHHHHhCCcEEEEECCCCCCCCccCCCce--------eecCC----HHHHHHHHHH
Confidence 3599999887643221100 013558899999999999999988876543321 11222 2799999999
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHH-HHHHHcCce-eEEEEeccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAA-WMRLKYPHI-AIGALASSAPI 229 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAa-W~R~kYP~l-v~gavASSApv 229 (530)
+++.+. .+|-.++|-|+||++-. ++-+.=.+. ..||+|=|.|.
T Consensus 191 i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 191 IKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred HHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 999885 67999999999999876 555544444 56666666665
No 84
>COG4099 Predicted peptidase [General function prediction only]
Probab=91.84 E-value=0.98 Score=46.31 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=76.8
Q ss_pred CCCCCCcEeeEEEEeccccCCCCCCC-cEEEE--eCCCCCcccc---cccchhHhhcchhcCCeEEeeeceeeecCCCCC
Q 009631 81 SFADLPTFSQRYLINTDHWVGPNRLG-PIFLY--CGNEGDIEWF---AVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG 154 (530)
Q Consensus 81 n~~~~~TF~QRY~~n~~~~~~~~~~g-PIfl~--~gGE~~~~~~---~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~ 154 (530)
+++....-+=|.|+-+.|- |++.- |++|+ -+|++.-... ..+.|-+....+|.+..|++-. | +--|.
T Consensus 167 d~~tgneLkYrly~Pkdy~--pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQ--y---~~if~ 239 (387)
T COG4099 167 DESTGNELKYRLYTPKDYA--PDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQ--Y---NPIFA 239 (387)
T ss_pred ccccCceeeEEEecccccC--CCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccc--c---ccccc
Confidence 4444456777888776663 22344 74444 4555432221 2234444455566664444422 1 11233
Q ss_pred CccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecc
Q 009631 155 STEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (530)
Q Consensus 155 ~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASS 226 (530)
+. |+ +-+.--|++-|++. +.+..+|+.+.++.-++|-|.||+.+--+-+||||.|.||+.=+
T Consensus 240 d~-------e~-~t~~~l~~~idli~--~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~ia 301 (387)
T COG4099 240 DS-------EE-KTLLYLIEKIDLIL--EVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIA 301 (387)
T ss_pred cc-------cc-ccchhHHHHHHHHH--HHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeec
Confidence 21 23 33344455555432 24556788889999999999999998888999999999997543
No 85
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=91.80 E-value=0.33 Score=52.00 Aligned_cols=53 Identities=23% Similarity=0.296 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcCCCCCCE-EEEecchhHHHHHHHHHHcCceeEEEEecc
Q 009631 168 YLTAEQALADFAVFITNLKQNLSAEASPV-VLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (530)
Q Consensus 168 yLt~~QALaDla~Fi~~~k~~~~~~~~pw-I~~GGSY~GaLAaW~R~kYP~lv~gavASS 226 (530)
-.|+++..+|++.+++++.- .++ +++|+|+||+.|-.+-.+||+.+.+.+.-+
T Consensus 140 ~~t~~d~~~~~~~ll~~lgi------~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 140 VVTILDFVRVQKELIKSLGI------ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred cCcHHHHHHHHHHHHHHcCC------CCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 47899999999998876542 355 599999999999999999999998776543
No 86
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=91.77 E-value=0.7 Score=48.28 Aligned_cols=95 Identities=21% Similarity=0.278 Sum_probs=68.0
Q ss_pred EEEEeCCCCCc-ccccc---cchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 108 IFLYCGNEGDI-EWFAV---NSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 108 Ifl~~gGE~~~-~~~~~---~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
=+|+..|.+.. +...+ ...-+.++|++.+|+|+..--|-+|.|. + ..|.++...|...-++
T Consensus 139 WiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~--G-------------~~s~~dLv~~~~a~v~ 203 (365)
T PF05677_consen 139 WILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST--G-------------PPSRKDLVKDYQACVR 203 (365)
T ss_pred EEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC--C-------------CCCHHHHHHHHHHHHH
Confidence 45555555543 32111 1234779999999999999999999984 2 2345778888888889
Q ss_pred HHhhhc-CCCCCCEEEEecchhHHHHHHHHHHcCc
Q 009631 184 NLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPH 217 (530)
Q Consensus 184 ~~k~~~-~~~~~pwI~~GGSY~GaLAaW~R~kYP~ 217 (530)
+++.+. +.+....|++|.|-||+.+|-.-.+.+.
T Consensus 204 yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~ 238 (365)
T PF05677_consen 204 YLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVL 238 (365)
T ss_pred HHHhcccCCChheEEEeeccccHHHHHHHHHhccc
Confidence 888644 3344579999999999999976555543
No 87
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.23 E-value=0.24 Score=55.20 Aligned_cols=116 Identities=22% Similarity=0.264 Sum_probs=68.3
Q ss_pred CCCcEEEEe-CCCCCcc---cccccchhHhhcchhcCCeEEeeeceeeec-CCCCCCccccccCCCcccCCCHHHHHHHH
Q 009631 104 RLGPIFLYC-GNEGDIE---WFAVNSGFVWDIAPRFGAMLVFPEHRYYGE-SMPYGSTEVAYQNATTLSYLTAEQALADF 178 (530)
Q Consensus 104 ~~gPIfl~~-gGE~~~~---~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~-S~P~~~l~~~~~st~nL~yLt~~QALaDl 178 (530)
+.-|.|+++ ||-+--. .+....-+....-...|-.||.+..|---. -.-|.. .+ -.++.+.-+ +|-
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~---~i--k~kmGqVE~----eDQ 710 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFES---HI--KKKMGQVEV----EDQ 710 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHH---HH--hhccCeeee----hhh
Confidence 447877775 4443210 111111222344456899999999883110 001111 11 123334333 444
Q ss_pred HHHHHHHhhhcCC-CCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 179 AVFITNLKQNLSA-EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 179 a~Fi~~~k~~~~~-~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+.=.+.+..++.. +-..+.+.|-||||=||+-.-.+||++|..|||+. ||
T Consensus 711 Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGa-pV 761 (867)
T KOG2281|consen 711 VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGA-PV 761 (867)
T ss_pred HHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccC-cc
Confidence 4444555555543 44689999999999999999999999999999965 55
No 88
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=91.16 E-value=0.54 Score=51.52 Aligned_cols=65 Identities=18% Similarity=0.221 Sum_probs=50.0
Q ss_pred cCCeEEeee-ceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEecchhHHHHH
Q 009631 135 FGAMLVFPE-HRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGGMLAA 209 (530)
Q Consensus 135 ~ga~vv~lE-HRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~-~~~~pwI~~GGSY~GaLAa 209 (530)
-.|.+|+++ ++--|.|..... + .-.+.+|+.+|+.+|++.+-+.+. ..+.|+.++|.||||..+.
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~---------~-~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p 186 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKA---------D-YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAP 186 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCC---------C-CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHH
Confidence 348999999 699999975321 1 124679999999999998876554 3568999999999998664
No 89
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=90.93 E-value=0.48 Score=47.74 Aligned_cols=111 Identities=18% Similarity=0.092 Sum_probs=70.5
Q ss_pred CCcEEEEeCCCCCcccc-cccchh------HhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWF-AVNSGF------VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALAD 177 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~-~~~~g~------~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaD 177 (530)
.-|++|...+-+..... ...... ..+..-+.|-++|....|-.|.|- +. ...+ .++-..|
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~--G~----------~~~~-~~~e~~D 85 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSE--GE----------FDPM-SPNEAQD 85 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS---S-----------B-TT-SHHHHHH
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCC--Cc----------cccC-ChhHHHH
Confidence 36888888777632100 000001 111255679999999999999985 22 1122 6777799
Q ss_pred HHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 178 FAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 178 la~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
.+..|+.+..+ .-.+.+|-++|+||+|..+-.....-|.-..|.++.+++.
T Consensus 86 ~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 86 GYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp HHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred HHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 99999999876 4456699999999999988888774555555565555544
No 90
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=90.89 E-value=0.34 Score=51.75 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=23.1
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceee
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYY 147 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyY 147 (530)
-||+++.-|=+... ...+.+..+||. .|..|+++|||+-
T Consensus 100 ~PvvIFSHGlgg~R--~~yS~~~~eLAS-~GyVV~aieHrDg 138 (379)
T PF03403_consen 100 FPVVIFSHGLGGSR--TSYSAICGELAS-HGYVVAAIEHRDG 138 (379)
T ss_dssp EEEEEEE--TT--T--TTTHHHHHHHHH-TT-EEEEE---SS
T ss_pred CCEEEEeCCCCcch--hhHHHHHHHHHh-CCeEEEEeccCCC
Confidence 59999987766432 234566789987 4999999999973
No 91
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=90.80 E-value=1.7 Score=42.89 Aligned_cols=53 Identities=19% Similarity=0.163 Sum_probs=38.0
Q ss_pred HHHHHHHHhhhc---CCCCCCEEEEecchhHHHHHHHHHHcC---ceeEEEEecccccc
Q 009631 178 FAVFITNLKQNL---SAEASPVVLFGGSYGGMLAAWMRLKYP---HIAIGALASSAPIL 230 (530)
Q Consensus 178 la~Fi~~~k~~~---~~~~~pwI~~GGSY~GaLAaW~R~kYP---~lv~gavASSApv~ 230 (530)
+++.++.+...+ ..+..|+|++|+|.||-+|--+-...+ +.+.+-+.=+.|..
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 344444454444 234569999999999988877765544 57889999889986
No 92
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=90.39 E-value=0.5 Score=51.74 Aligned_cols=115 Identities=18% Similarity=0.162 Sum_probs=66.4
Q ss_pred CcEEEEeCCCCCcccccc-cchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAV-NSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~-~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
-||+++|=|-+-..+... .......++.+.+..+|.+-+|= -+++=+ ++..+.-=+-..+|-|...=.+.
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRl----g~~Gfl-----~~~~~~~~~gN~Gl~Dq~~AL~W 195 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRL----GAFGFL-----SLGDLDAPSGNYGLLDQRLALKW 195 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE--------HHHHH------BSSSTTSHBSTHHHHHHHHHHHH
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccc----cccccc-----cccccccCchhhhhhhhHHHHHH
Confidence 699999955543332221 11223467788899999999993 111111 11110000456788888888888
Q ss_pred Hhhh---cCCCCCCEEEEecchhHHHHHHHHHHcC---ceeEEEEecccccc
Q 009631 185 LKQN---LSAEASPVVLFGGSYGGMLAAWMRLKYP---HIAIGALASSAPIL 230 (530)
Q Consensus 185 ~k~~---~~~~~~pwI~~GGSY~GaLAaW~R~kYP---~lv~gavASSApv~ 230 (530)
+++. ++.+...+.++|.|-||+.+.. .+.-| .+|..||+-|++..
T Consensus 196 V~~nI~~FGGDp~~VTl~G~SAGa~sv~~-~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 196 VQDNIAAFGGDPDNVTLFGQSAGAASVSL-LLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHGGGGTEEEEEEEEEEETHHHHHHHH-HHHGGGGTTSBSEEEEES--TT
T ss_pred HHhhhhhcccCCcceeeeeecccccccce-eeeccccccccccccccccccc
Confidence 8864 4556668999999965555554 44446 59999999999664
No 93
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=90.25 E-value=0.45 Score=49.73 Aligned_cols=91 Identities=24% Similarity=0.334 Sum_probs=57.4
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCC-C-CCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESM-P-YGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~-P-~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
-|++|+- |-|.-...+..+ +..||+ .=.|.++.-=-||.|. | |+.- .++++. .|++
T Consensus 91 ~plVliH-GyGAg~g~f~~N--f~~La~--~~~vyaiDllG~G~SSRP~F~~d----~~~~e~-------------~fve 148 (365)
T KOG4409|consen 91 TPLVLIH-GYGAGLGLFFRN--FDDLAK--IRNVYAIDLLGFGRSSRPKFSID----PTTAEK-------------EFVE 148 (365)
T ss_pred CcEEEEe-ccchhHHHHHHh--hhhhhh--cCceEEecccCCCCCCCCCCCCC----cccchH-------------HHHH
Confidence 5666555 465433322111 347888 5567777778888775 4 3221 011111 6776
Q ss_pred HHhh---hcCCCCCCEEEEecchhHHHHHHHHHHcCceeE
Q 009631 184 NLKQ---NLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAI 220 (530)
Q Consensus 184 ~~k~---~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~ 220 (530)
.+.+ +.+. .|-|++|+|+||=|||=+.+|||+-|-
T Consensus 149 siE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~ 186 (365)
T KOG4409|consen 149 SIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVE 186 (365)
T ss_pred HHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhc
Confidence 6653 2332 389999999999999999999998654
No 94
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=89.43 E-value=0.71 Score=49.83 Aligned_cols=47 Identities=23% Similarity=0.378 Sum_probs=38.0
Q ss_pred HHHhhhcCC--CCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 183 TNLKQNLSA--EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 183 ~~~k~~~~~--~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
-.+++++.. +...+++.|.||||..|.++-.+||+.|.++++-|+-+
T Consensus 275 P~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 275 PQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 444555443 44579999999999999999999999999988888755
No 95
>PRK11071 esterase YqiA; Provisional
Probab=89.39 E-value=1.5 Score=41.82 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCc
Q 009631 173 QALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH 217 (530)
Q Consensus 173 QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~ 217 (530)
++.+++..+++.. . ..+++++|.|.||.+|..+-.++|.
T Consensus 46 ~~~~~l~~l~~~~----~--~~~~~lvG~S~Gg~~a~~~a~~~~~ 84 (190)
T PRK11071 46 DAAELLESLVLEH----G--GDPLGLVGSSLGGYYATWLSQCFML 84 (190)
T ss_pred HHHHHHHHHHHHc----C--CCCeEEEEECHHHHHHHHHHHHcCC
Confidence 4556666665542 2 2489999999999999999999994
No 96
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=89.18 E-value=0.51 Score=49.66 Aligned_cols=69 Identities=22% Similarity=0.299 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCCE-EEEecchhHHHHHHHHHHcCceeE--EEEecccccccccCCCCcchhhHHHhhhhc
Q 009631 175 LADFAVFITNLKQNLSAEASPV-VLFGGSYGGMLAAWMRLKYPHIAI--GALASSAPILQFEDIVPPETFYNIVSSDFK 250 (530)
Q Consensus 175 LaDla~Fi~~~k~~~~~~~~pw-I~~GGSY~GaLAaW~R~kYP~lv~--gavASSApv~a~~~~~df~~y~~~V~~~~~ 250 (530)
+.|.++..+.+-..++. .++ .++|||+|||.|-=.-..||+.+. ..+|+|+.+.+. --.|.++..+++.
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~-----~ia~~~~~r~AI~ 200 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ-----NIAFNEVQRQAIE 200 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH-----HHHHHHHHHHHHH
Confidence 45666666555555543 233 489999999999855569999987 556777766532 2345565555553
No 97
>COG0400 Predicted esterase [General function prediction only]
Probab=88.74 E-value=0.79 Score=44.82 Aligned_cols=58 Identities=24% Similarity=0.379 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+...+.++.|++....++..+..+.|++|-|=|+++++-.-.++|+.+.++++-|+-+
T Consensus 77 ~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 77 DLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 4445566677777777888888899999999999999999999999999999988654
No 98
>PRK13604 luxD acyl transferase; Provisional
Probab=88.72 E-value=2.3 Score=44.16 Aligned_cols=98 Identities=11% Similarity=-0.003 Sum_probs=63.3
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcc---hhcCCeEEeeeceee-ecCCCCCCccccccCCCcccCCCHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIA---PRFGAMLVFPEHRYY-GESMPYGSTEVAYQNATTLSYLTAEQALADFAVF 181 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA---~~~ga~vv~lEHRyY-G~S~P~~~l~~~~~st~nL~yLt~~QALaDla~F 181 (530)
.|++++..|-+.-. .....+| .+.|-.++...+|-. |+|- ++. +..|+.-...|+..-
T Consensus 37 ~~~vIi~HGf~~~~------~~~~~~A~~La~~G~~vLrfD~rg~~GeS~--G~~----------~~~t~s~g~~Dl~aa 98 (307)
T PRK13604 37 NNTILIASGFARRM------DHFAGLAEYLSSNGFHVIRYDSLHHVGLSS--GTI----------DEFTMSIGKNSLLTV 98 (307)
T ss_pred CCEEEEeCCCCCCh------HHHHHHHHHHHHCCCEEEEecCCCCCCCCC--Ccc----------ccCcccccHHHHHHH
Confidence 46677776665421 1233333 367999999999986 9983 221 122322347899888
Q ss_pred HHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecc
Q 009631 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (530)
Q Consensus 182 i~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASS 226 (530)
+.++|... ..+.+++|.|.||+.|.-.....| +.+.++-|
T Consensus 99 id~lk~~~---~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~s 138 (307)
T PRK13604 99 VDWLNTRG---INNLGLIAASLSARIAYEVINEID--LSFLITAV 138 (307)
T ss_pred HHHHHhcC---CCceEEEEECHHHHHHHHHhcCCC--CCEEEEcC
Confidence 88888642 357999999999999865555444 55544444
No 99
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=88.44 E-value=2.2 Score=47.69 Aligned_cols=88 Identities=13% Similarity=0.067 Sum_probs=57.8
Q ss_pred chhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchh
Q 009631 125 SGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYG 204 (530)
Q Consensus 125 ~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~ 204 (530)
++++..+++ .|--|+++..|-+|.|...- + +. +-+..++...+..+..... ..|++++|.|.|
T Consensus 210 ~Slv~~L~~-qGf~V~~iDwrgpg~s~~~~-------~---~d----dY~~~~i~~al~~v~~~~g--~~kv~lvG~cmG 272 (532)
T TIGR01838 210 NSLVRWLVE-QGHTVFVISWRNPDASQADK-------T---FD----DYIRDGVIAALEVVEAITG--EKQVNCVGYCIG 272 (532)
T ss_pred hHHHHHHHH-CCcEEEEEECCCCCcccccC-------C---hh----hhHHHHHHHHHHHHHHhcC--CCCeEEEEECcC
Confidence 345555555 47889999999999774211 1 11 2344455556666654432 358999999999
Q ss_pred HHHH----HHHHHH-cCceeEEEEeccccc
Q 009631 205 GMLA----AWMRLK-YPHIAIGALASSAPI 229 (530)
Q Consensus 205 GaLA----aW~R~k-YP~lv~gavASSApv 229 (530)
|+++ +++... +|+.+.+.+.-.+|+
T Consensus 273 Gtl~a~ala~~aa~~~~~rv~slvll~t~~ 302 (532)
T TIGR01838 273 GTLLSTALAYLAARGDDKRIKSATFFTTLL 302 (532)
T ss_pred cHHHHHHHHHHHHhCCCCccceEEEEecCc
Confidence 9985 444455 488888777777776
No 100
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=87.92 E-value=0.89 Score=44.06 Aligned_cols=59 Identities=24% Similarity=0.318 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 171 ~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
++++++=+..||....+. ..+..++++.|-|=||+||.-+-..+|+.+.|+++=|+.+.
T Consensus 83 i~~s~~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 344555566666654433 34567899999999999999999999999999999888774
No 101
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=86.21 E-value=3.2 Score=43.38 Aligned_cols=30 Identities=33% Similarity=0.499 Sum_probs=28.2
Q ss_pred CCEEEEecchhHHHHHHHHHHcCceeEEEE
Q 009631 194 SPVVLFGGSYGGMLAAWMRLKYPHIAIGAL 223 (530)
Q Consensus 194 ~pwI~~GGSY~GaLAaW~R~kYP~lv~gav 223 (530)
.|++++|.||||.+|--+...||+.|.+-+
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAYYPETVDSLV 157 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHhCccccccee
Confidence 579999999999999999999999998877
No 102
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=86.19 E-value=1.6 Score=47.65 Aligned_cols=57 Identities=14% Similarity=0.186 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCcee----EEEEeccccc
Q 009631 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIA----IGALASSAPI 229 (530)
Q Consensus 171 ~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv----~gavASSApv 229 (530)
.++.++|++.+++.+.+..+ ..|++++|+|.||.++..|-..+|+.+ ..-|+=++|.
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 46788999999998876654 369999999999999999999999753 3334445554
No 103
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.88 E-value=0.63 Score=46.36 Aligned_cols=61 Identities=31% Similarity=0.312 Sum_probs=37.7
Q ss_pred cccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH-----HHcCceeEEEEeccccc
Q 009631 165 TLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR-----LKYPHIAIGALASSAPI 229 (530)
Q Consensus 165 nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R-----~kYP~lv~gavASSApv 229 (530)
+.-.+|.-++|+|. ....++. -..+.||.+||+|+||+||==.. ...|=...-.-+++||.
T Consensus 49 ~ep~~~di~~Lad~--la~el~~--~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~ 114 (244)
T COG3208 49 GEPLLTDIESLADE--LANELLP--PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPH 114 (244)
T ss_pred CCcccccHHHHHHH--HHHHhcc--ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCC
Confidence 44566666777763 2333332 23578999999999999985433 34452233344677884
No 104
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=85.32 E-value=1 Score=52.31 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=73.8
Q ss_pred CCcEEEE-eCCCCCcccc-cccchhHhhcchhcCCeEEeeeceee---ecCCCCCCccccccCCCcccCCCHHHHHHHHH
Q 009631 105 LGPIFLY-CGNEGDIEWF-AVNSGFVWDIAPRFGAMLVFPEHRYY---GESMPYGSTEVAYQNATTLSYLTAEQALADFA 179 (530)
Q Consensus 105 ~gPIfl~-~gGE~~~~~~-~~~~g~~~~lA~~~ga~vv~lEHRyY---G~S~P~~~l~~~~~st~nL~yLt~~QALaDla 179 (530)
.=|+++. -||.+..... ....++...++-..|.+++.+.=|.= |......- ..+|..- =+.|..
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~-------~~~lG~~----ev~D~~ 593 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSAL-------PRNLGDV----EVKDQI 593 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHh-------hhhcCCc----chHHHH
Confidence 4576655 4555532211 11224445678999999999999953 33322111 1123222 245666
Q ss_pred HHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 180 VFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 180 ~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
.-++.+.+..-.+..++.++|+||||=|++++-.++|+-+.++=++-|||-
T Consensus 594 ~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 594 EAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred HHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 666666655555677999999999999999999999955555556688984
No 105
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=85.22 E-value=4 Score=41.05 Aligned_cols=113 Identities=16% Similarity=0.202 Sum_probs=81.6
Q ss_pred CcEeeEEEEeccccCCCCCCCcEEEEeCCCC-CcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCC
Q 009631 86 PTFSQRYLINTDHWVGPNRLGPIFLYCGNEG-DIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNAT 164 (530)
Q Consensus 86 ~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~-~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~ 164 (530)
+.=-+++++...-+ ..+++||..|.. +.. ...-+...++..++-.++...-|-||.|.=.+. ..
T Consensus 45 gn~~~~~y~~~~~~-----~~~~lly~hGNa~Dlg---q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps-------E~ 109 (258)
T KOG1552|consen 45 GNEIVCMYVRPPEA-----AHPTLLYSHGNAADLG---QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS-------ER 109 (258)
T ss_pred CCEEEEEEEcCccc-----cceEEEEcCCcccchH---HHHHHHHHHhhcccceEEEEecccccccCCCcc-------cc
Confidence 33345555544432 158999998883 222 112234577888899999999999999975443 22
Q ss_pred cccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEe
Q 009631 165 TLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA 224 (530)
Q Consensus 165 nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavA 224 (530)
.-.||+..--+.++..++ ++.++|++|.|-|-.-+.-...++| ..|.|-
T Consensus 110 --------n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 110 --------NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred --------cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 335899999999999998 7889999999999888888888999 444443
No 106
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=85.20 E-value=2.2 Score=40.69 Aligned_cols=57 Identities=16% Similarity=0.237 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccc
Q 009631 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (530)
Q Consensus 171 ~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSAp 228 (530)
.+.+-.+|+.|.+-+.... .++....++|+|||..++...-+.-+..++-.+.-.+|
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 4677889999999998765 56779999999999999999887755555544443334
No 107
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=83.65 E-value=1.8 Score=38.39 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=20.5
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHH
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~k 214 (530)
+.+++. +.+++++|+|-||+||+-+...
T Consensus 57 ~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 57 LVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHhccc--CccchhhccchHHHHHHHHHHh
Confidence 334443 4689999999999998765543
No 108
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=83.13 E-value=2.6 Score=41.70 Aligned_cols=50 Identities=14% Similarity=0.221 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcC----ceeEEEEeccccc
Q 009631 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP----HIAIGALASSAPI 229 (530)
Q Consensus 177 Dla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP----~lv~gavASSApv 229 (530)
..+.+.+.+.+.+. .++++.|+|.||+||...-..-+ +-+..+++--||=
T Consensus 70 ~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 70 SALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 44566666665554 36999999999999999887744 4566777777774
No 109
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.91 E-value=3.5 Score=40.23 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHH
Q 009631 176 ADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 176 aDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~ 213 (530)
.++...++.+++++ ++.+++++|+|.||++|+.+-.
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLAL 147 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHH
Confidence 44444555444443 4679999999999999876443
No 110
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=82.42 E-value=6.4 Score=41.30 Aligned_cols=120 Identities=21% Similarity=0.364 Sum_probs=78.3
Q ss_pred eCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCC--CCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhc
Q 009631 112 CGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESM--PYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL 189 (530)
Q Consensus 112 ~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~--P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~ 189 (530)
|+-||.+..+- -|.+.. --+.|-.++-..|--|+.|. |++.. ...|+.-++.|+-+. +
T Consensus 247 IC~EGNAGFYE--vG~m~t-P~~lgYsvLGwNhPGFagSTG~P~p~n--------------~~nA~DaVvQfAI~~---L 306 (517)
T KOG1553|consen 247 ICFEGNAGFYE--VGVMNT-PAQLGYSVLGWNHPGFAGSTGLPYPVN--------------TLNAADAVVQFAIQV---L 306 (517)
T ss_pred EEecCCccceE--eeeecC-hHHhCceeeccCCCCccccCCCCCccc--------------chHHHHHHHHHHHHH---c
Confidence 33477664332 233332 34578899999999999986 55431 234655566675433 3
Q ss_pred CCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccccccCCCCcchhhHHHhhhhccCChhhHHHHHHHHH
Q 009631 190 SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWG 265 (530)
Q Consensus 190 ~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~a~~~~~df~~y~~~V~~~~~~~~~~C~~~i~~~~~ 265 (530)
+....-.|++|-|-||--++|....||++ +|+|+. + .|.+.+--++..|+..-+..|+.+++
T Consensus 307 gf~~edIilygWSIGGF~~~waAs~YPdV-------kavvLD--A-----tFDDllpLAl~rMP~~~~giV~~aiR 368 (517)
T KOG1553|consen 307 GFRQEDIILYGWSIGGFPVAWAASNYPDV-------KAVVLD--A-----TFDDLLPLALFRMPTFFSGIVEHAIR 368 (517)
T ss_pred CCCccceEEEEeecCCchHHHHhhcCCCc-------eEEEee--c-----chhhhhhHHhhhchHHHHHHHHHHHH
Confidence 44445789999999999999999999997 567762 2 24455555555677666666665554
No 111
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=82.33 E-value=1.7 Score=44.01 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=38.6
Q ss_pred hhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccccc
Q 009631 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (530)
Q Consensus 187 ~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~a 231 (530)
+.+..+..+-.++|+||||-.+-..-++||+.|..+++.|.-+..
T Consensus 130 ~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 130 ARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred cccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 446556668999999999999999999999999999998876653
No 112
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=81.71 E-value=13 Score=37.46 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=72.1
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhc--CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRF--GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~--ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
.++|++|+|.--+..++ ..|+..|-+.+ +..++.+-|.-+-.+...... + ++-+..|.++=++=-..|++
T Consensus 2 ~~li~~IPGNPGlv~fY--~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~-----~-~~~~~~sL~~QI~hk~~~i~ 73 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY--EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKF-----S-PNGRLFSLQDQIEHKIDFIK 73 (266)
T ss_pred cEEEEEECCCCChHHHH--HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccc-----c-CCCCccCHHHHHHHHHHHHH
Confidence 46777777764333333 23566676664 567777878755444332211 1 45788899888888888888
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHHcC
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP 216 (530)
.+......++.|+|++|+|-|+=++-=+-.++|
T Consensus 74 ~~~~~~~~~~~~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 74 ELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred HHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc
Confidence 777655445789999999999999998888888
No 113
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=81.02 E-value=2.9 Score=40.76 Aligned_cols=51 Identities=18% Similarity=0.269 Sum_probs=34.3
Q ss_pred HHHHHHHHh---hhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 178 FAVFITNLK---QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 178 la~Fi~~~k---~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
|.+|-+.++ ..-.....++.++|.|.||.||-.+..+|| .+.+.|+.|++.
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 345544443 322223469999999999999999999999 666666666554
No 114
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.70 E-value=3.2 Score=37.76 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=27.3
Q ss_pred CCCCEEEEecchhHHHHHHHHHHcCc----eeEEEEeccccc
Q 009631 192 EASPVVLFGGSYGGMLAAWMRLKYPH----IAIGALASSAPI 229 (530)
Q Consensus 192 ~~~pwI~~GGSY~GaLAaW~R~kYP~----lv~gavASSApv 229 (530)
++.+++++|+|.||++|.-+-..++. .....++-.+|-
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 46799999999999999987766654 344455544443
No 115
>PLN02408 phospholipase A1
Probab=79.40 E-value=4.8 Score=42.74 Aligned_cols=54 Identities=17% Similarity=0.295 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHH----HHHHHcCce-eEEEEeccccc
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAA----WMRLKYPHI-AIGALASSAPI 229 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAa----W~R~kYP~l-v~gavASSApv 229 (530)
+|.++.+.++++ .+.....+++++|+|.|||||+ +++..+++. ....+.-.+|=
T Consensus 182 ~qVl~eI~~ll~----~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPR 240 (365)
T PLN02408 182 EMVREEIARLLQ----SYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPR 240 (365)
T ss_pred HHHHHHHHHHHH----hcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCC
Confidence 566676666554 3332334799999999999987 445555442 23355555553
No 116
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=79.06 E-value=3.3 Score=39.78 Aligned_cols=43 Identities=35% Similarity=0.563 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCc
Q 009631 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH 217 (530)
Q Consensus 169 Lt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~ 217 (530)
.+.++|++.+...|...+. ..|+++|-|.||-.|+|+..+|+-
T Consensus 40 ~~p~~a~~~l~~~i~~~~~------~~~~liGSSlGG~~A~~La~~~~~ 82 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKP------ENVVLIGSSLGGFYATYLAERYGL 82 (187)
T ss_pred cCHHHHHHHHHHHHHhCCC------CCeEEEEEChHHHHHHHHHHHhCC
Confidence 3567787777666654432 239999999999999999999963
No 117
>PLN02454 triacylglycerol lipase
Probab=78.59 E-value=6.9 Score=42.21 Aligned_cols=40 Identities=28% Similarity=0.307 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH
Q 009631 173 QALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 173 QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R 212 (530)
.+-.++...++.+++.+...+.+++++|+|.|||||.-..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA 246 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAA 246 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHH
Confidence 3445555566666666654344699999999999998765
No 118
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=78.03 E-value=7.6 Score=40.51 Aligned_cols=117 Identities=16% Similarity=0.045 Sum_probs=62.4
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCC-Ccc-ccc-----cCCCc-ccCCCHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG-STE-VAY-----QNATT-LSYLTAEQALA 176 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~-~l~-~~~-----~st~n-L~yLt~~QALa 176 (530)
.-|+++..-|-+.....+. -...+| ..|.+++.++=|=.|...+.. ... ... ...++ -.-+=-..++.
T Consensus 82 ~~Pavv~~hGyg~~~~~~~---~~~~~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~ 157 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPF---DLLPWA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYL 157 (320)
T ss_dssp SEEEEEEE--TT--GGGHH---HHHHHH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcc---cccccc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHH
Confidence 3677777766654321110 012334 468889999999777322211 100 000 00011 11111235678
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecc
Q 009631 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (530)
Q Consensus 177 Dla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASS 226 (530)
|..+=+..++..-.-+..++.++|+|-||+||++.....|. |.++++..
T Consensus 158 D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~v 206 (320)
T PF05448_consen 158 DAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADV 206 (320)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEES
T ss_pred HHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecC
Confidence 88888888875433345689999999999999999999998 55555543
No 119
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=77.65 E-value=2.3 Score=47.91 Aligned_cols=143 Identities=19% Similarity=0.194 Sum_probs=86.4
Q ss_pred eEEEeecCC-CCCCCCCcEeeEEEEecc---------ccC----CCCCCCcEEEEeCCCCCcccccccchhH-hhcchhc
Q 009631 71 RYFEQRLDH-FSFADLPTFSQRYLINTD---------HWV----GPNRLGPIFLYCGNEGDIEWFAVNSGFV-WDIAPRF 135 (530)
Q Consensus 71 ~~f~Q~lDH-Fn~~~~~TF~QRY~~n~~---------~~~----~~~~~gPIfl~~gGE~~~~~~~~~~g~~-~~lA~~~ 135 (530)
.-.+|+|=- |||+ ..+.+|-|+... +|+ .+ ..+|++||-=|---++ ++.+|. ..+.=--
T Consensus 402 ~LkqqeV~~g~dp~--~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~-g~~p~lLygYGaYG~s---~~p~Fs~~~lSLlD 475 (682)
T COG1770 402 LLKQQEVPGGFDPE--DYVSRRIWATADDGVQVPVSLVYRKDTKLD-GSAPLLLYGYGAYGIS---MDPSFSIARLSLLD 475 (682)
T ss_pred EEEeccCCCCCChh--HeEEEEEEEEcCCCcEeeEEEEEecccCCC-CCCcEEEEEecccccc---CCcCcccceeeeec
Confidence 456787754 8875 689999999832 222 11 2468888853322111 111111 1111112
Q ss_pred CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 136 ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
-|.|+++-|===|.-+=.. --++=|.|+=.....|+..-++++.+.--......++.|||-||+|..-....-
T Consensus 476 RGfiyAIAHVRGGgelG~~-------WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~ 548 (682)
T COG1770 476 RGFVYAIAHVRGGGELGRA-------WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA 548 (682)
T ss_pred CceEEEEEEeecccccChH-------HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC
Confidence 2455555553222111000 113346777778888888777887654222345799999999999999999999
Q ss_pred CceeEEEEecc
Q 009631 216 PHIAIGALASS 226 (530)
Q Consensus 216 P~lv~gavASS 226 (530)
|++|.|++|-+
T Consensus 549 P~lf~~iiA~V 559 (682)
T COG1770 549 PDLFAGIIAQV 559 (682)
T ss_pred hhhhhheeecC
Confidence 99999999866
No 120
>PLN02310 triacylglycerol lipase
Probab=76.80 E-value=6 Score=42.57 Aligned_cols=56 Identities=21% Similarity=0.356 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH----HHcCceeEEEEeccccc
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR----LKYPHIAIGALASSAPI 229 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R----~kYP~lv~gavASSApv 229 (530)
+|.++.+...++..+. ..++.+++++|+|.|||||+-+. ...|+.-...+.-.+|-
T Consensus 189 ~qVl~eV~~L~~~y~~--~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPR 248 (405)
T PLN02310 189 EQVMQEVKRLVNFYRG--KGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHhhcc--cCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCC
Confidence 6777777666554432 12346899999999999997554 34566545566666664
No 121
>PRK07868 acyl-CoA synthetase; Validated
Probab=76.03 E-value=24 Score=42.57 Aligned_cols=85 Identities=15% Similarity=0.116 Sum_probs=52.4
Q ss_pred HhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHH
Q 009631 128 VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGML 207 (530)
Q Consensus 128 ~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 207 (530)
+..|+++ |--++++. ||.|.+-.. . ...+..+.+.++..++..++..- ..++.++|.|.||++
T Consensus 92 v~~L~~~-g~~v~~~d---~G~~~~~~~---------~-~~~~l~~~i~~l~~~l~~v~~~~---~~~v~lvG~s~GG~~ 154 (994)
T PRK07868 92 VGILHRA-GLDPWVID---FGSPDKVEG---------G-MERNLADHVVALSEAIDTVKDVT---GRDVHLVGYSQGGMF 154 (994)
T ss_pred HHHHHHC-CCEEEEEc---CCCCChhHc---------C-ccCCHHHHHHHHHHHHHHHHHhh---CCceEEEEEChhHHH
Confidence 4344443 55788888 465433111 1 13566666656666665555332 248999999999999
Q ss_pred HHHHHH-HcCceeEEEEeccccc
Q 009631 208 AAWMRL-KYPHIAIGALASSAPI 229 (530)
Q Consensus 208 AaW~R~-kYP~lv~gavASSApv 229 (530)
+.-+-. ..|+.+.+.+.-.+|+
T Consensus 155 a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 155 CYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred HHHHHHhcCCCccceEEEEeccc
Confidence 975554 4566787777766665
No 122
>PLN02571 triacylglycerol lipase
Probab=75.60 E-value=4.4 Score=43.63 Aligned_cols=38 Identities=24% Similarity=0.401 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHH
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~ 213 (530)
+|.++++..+++..+ ..+.+++++|+|.|||||+-+..
T Consensus 208 ~qvl~eV~~L~~~y~----~e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 208 DQVLNEVGRLVEKYK----DEEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHhcC----cccccEEEeccchHHHHHHHHHH
Confidence 788888888765433 22458999999999999987654
No 123
>PLN03037 lipase class 3 family protein; Provisional
Probab=74.36 E-value=6.7 Score=43.35 Aligned_cols=56 Identities=25% Similarity=0.392 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH----HHcCce-eEEEEeccccc
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR----LKYPHI-AIGALASSAPI 229 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R----~kYP~l-v~gavASSApv 229 (530)
+|.++++...++..+.. .++.+++++|+|.|||||.-.. ...|++ -..++...+|=
T Consensus 298 eQVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPR 358 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPR 358 (525)
T ss_pred HHHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCC
Confidence 78889988887665531 2345899999999999998655 346665 33445555563
No 124
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=74.27 E-value=3.3 Score=39.96 Aligned_cols=113 Identities=17% Similarity=0.203 Sum_probs=64.1
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecC-CCCCCccccccCCCcccCC---CHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGES-MPYGSTEVAYQNATTLSYL---TAEQALADFAVF 181 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S-~P~~~l~~~~~st~nL~yL---t~~QALaDla~F 181 (530)
.|.+|++-+-.-+.. ....+...||++ |-.+++.. =|.|.. .|....+ ....+..+ ..++..+|+...
T Consensus 14 ~~~Vvv~~d~~G~~~--~~~~~ad~lA~~-Gy~v~~pD-~f~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~aa 85 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNP--NIRDLADRLAEE-GYVVLAPD-LFGGRGAPPSDPEE----AFAAMRELFAPRPEQVAADLQAA 85 (218)
T ss_dssp EEEEEEE-BTTBS-H--HHHHHHHHHHHT-T-EEEEE--CCCCTS--CCCHHC----HHHHHHHCHHHSHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCch--HHHHHHHHHHhc-CCCEEecc-cccCCCCCccchhh----HHHHHHHHHhhhHHHHHHHHHHH
Confidence 576666642221111 112234466654 64554443 366666 3433210 11122222 267899999999
Q ss_pred HHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccc
Q 009631 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (530)
Q Consensus 182 i~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSA 227 (530)
+..++..-.....++.++|-|+||.+|..+.... ..+.|+++.-+
T Consensus 86 ~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 86 VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 9999876544456999999999999998888777 45556655444
No 125
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=74.12 E-value=13 Score=43.55 Aligned_cols=85 Identities=15% Similarity=-0.008 Sum_probs=60.2
Q ss_pred cchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcC--------------CCCCCE
Q 009631 131 IAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS--------------AEASPV 196 (530)
Q Consensus 131 lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~--------------~~~~pw 196 (530)
+--+.|-++|....|-.|.|--..+ .+ ..+-.+|...-|+.+..... -.+.++
T Consensus 274 ~~~~rGYaVV~~D~RGtg~SeG~~~------------~~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkV 340 (767)
T PRK05371 274 YFLPRGFAVVYVSGIGTRGSDGCPT------------TG-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKV 340 (767)
T ss_pred HHHhCCeEEEEEcCCCCCCCCCcCc------------cC-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCee
Confidence 3334599999999999998864221 11 14455677777777764211 135799
Q ss_pred EEEecchhHHHHHHHHHHcCceeEEEEecccc
Q 009631 197 VLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (530)
Q Consensus 197 I~~GGSY~GaLAaW~R~kYP~lv~gavASSAp 228 (530)
.++|.||+|.++.+.....|.-..+.|+.+|.
T Consensus 341 Gm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 341 AMTGKSYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred EEEEEcHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 99999999999999988888877777775544
No 126
>PLN02209 serine carboxypeptidase
Probab=73.52 E-value=39 Score=36.86 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEecchhHH----HHHHHHHH
Q 009631 168 YLTAEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGGM----LAAWMRLK 214 (530)
Q Consensus 168 yLt~~QALaDla~Fi~~~k~~~~-~~~~pwI~~GGSY~Ga----LAaW~R~k 214 (530)
+-+.+++.+|+.+|++.+=+.+. ..+.|+-++|-||||. +|..+...
T Consensus 140 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~ 191 (437)
T PLN02209 140 RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKG 191 (437)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhh
Confidence 34455666999999987655443 2457999999999995 67766543
No 127
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=72.42 E-value=7 Score=31.96 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=42.5
Q ss_pred ccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHH
Q 009631 98 HWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALAD 177 (530)
Q Consensus 98 ~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaD 177 (530)
.|..+++...+++++=|=++-.... .-+...|| +.|-.|+...||-+|+|.+... ..=+.++-+.|
T Consensus 8 ~w~p~~~~k~~v~i~HG~~eh~~ry--~~~a~~L~-~~G~~V~~~D~rGhG~S~g~rg-----------~~~~~~~~v~D 73 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFGEHSGRY--AHLAEFLA-EQGYAVFAYDHRGHGRSEGKRG-----------HIDSFDDYVDD 73 (79)
T ss_pred EecCCCCCCEEEEEeCCcHHHHHHH--HHHHHHHH-hCCCEEEEECCCcCCCCCCccc-----------ccCCHHHHHHH
Confidence 3543322255777775554322211 11223333 3678999999999999974211 12245789999
Q ss_pred HHHHHH
Q 009631 178 FAVFIT 183 (530)
Q Consensus 178 la~Fi~ 183 (530)
+..|++
T Consensus 74 ~~~~~~ 79 (79)
T PF12146_consen 74 LHQFIQ 79 (79)
T ss_pred HHHHhC
Confidence 999873
No 128
>PLN02802 triacylglycerol lipase
Probab=72.40 E-value=9 Score=42.24 Aligned_cols=54 Identities=17% Similarity=0.279 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHH----HHHHHcCce-eEEEEeccccc
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAA----WMRLKYPHI-AIGALASSAPI 229 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAa----W~R~kYP~l-v~gavASSApv 229 (530)
+|.++++..+++ .|...+..++++|+|.|||||. +++...|+. -...+...+|=
T Consensus 312 eqVl~eV~~Ll~----~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPR 370 (509)
T PLN02802 312 ESVVGEVRRLME----KYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPR 370 (509)
T ss_pred HHHHHHHHHHHH----hCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCC
Confidence 455666555543 3443345799999999999987 455555553 22355555563
No 129
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=72.33 E-value=8.7 Score=38.85 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH
Q 009631 168 YLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 168 yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R 212 (530)
.=|+++..+.++.=|+.+. +..|+++.|-|+||++|-=+.
T Consensus 44 ~~~l~~~a~~yv~~Ir~~Q-----P~GPy~L~G~S~GG~vA~evA 83 (257)
T COG3319 44 FASLDDMAAAYVAAIRRVQ-----PEGPYVLLGWSLGGAVAFEVA 83 (257)
T ss_pred cCCHHHHHHHHHHHHHHhC-----CCCCEEEEeeccccHHHHHHH
Confidence 4456777776666555443 457999999999999987443
No 130
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=72.20 E-value=20 Score=44.07 Aligned_cols=92 Identities=12% Similarity=0.014 Sum_probs=58.5
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhc--CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRF--GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~--ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
.|+|++-|+-+... .+..+++.+ +..++.++-+..|.+.+ .--++++..+|++..+.
T Consensus 1069 ~~l~~lh~~~g~~~-------~~~~l~~~l~~~~~v~~~~~~g~~~~~~--------------~~~~l~~la~~~~~~i~ 1127 (1296)
T PRK10252 1069 PTLFCFHPASGFAW-------QFSVLSRYLDPQWSIYGIQSPRPDGPMQ--------------TATSLDEVCEAHLATLL 1127 (1296)
T ss_pred CCeEEecCCCCchH-------HHHHHHHhcCCCCcEEEEECCCCCCCCC--------------CCCCHHHHHHHHHHHHH
Confidence 46777766655432 233444444 35566666666654321 12377888888887776
Q ss_pred HHhhhcCCCCCCEEEEecchhHHHHHHHHHH---cCceeEEEE
Q 009631 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLK---YPHIAIGAL 223 (530)
Q Consensus 184 ~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~k---YP~lv~gav 223 (530)
.+. ...|.+++|.|+||.+|..+..+ .|+.+..-+
T Consensus 1128 ~~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~ 1165 (1296)
T PRK10252 1128 EQQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLG 1165 (1296)
T ss_pred hhC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEE
Confidence 532 23599999999999999988775 466554433
No 131
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=71.74 E-value=7.3 Score=41.68 Aligned_cols=58 Identities=17% Similarity=0.274 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCc------eeEEEEecccccc
Q 009631 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH------IAIGALASSAPIL 230 (530)
Q Consensus 170 t~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~------lv~gavASSApv~ 230 (530)
..++....|...|+.+.+.. +.|++++|+|+||.++-.|-...+. -|.+.|+=++|..
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 44566777777777766433 5799999999999999998888864 3777788777764
No 132
>COG0627 Predicted esterase [General function prediction only]
Probab=71.67 E-value=8.5 Score=40.12 Aligned_cols=118 Identities=19% Similarity=0.127 Sum_probs=72.4
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEe--eeceeeecCCC----CCCccccccCCCcccCCCHHHH----
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVF--PEHRYYGESMP----YGSTEVAYQNATTLSYLTAEQA---- 174 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~--lEHRyYG~S~P----~~~l~~~~~st~nL~yLt~~QA---- 174 (530)
.=||.++.+|+..-++.+...+-+...|.+.|..++. .+-||.|+-.+ .+.. .+| |+...|.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~-~sf-------Y~d~~~~~~~~ 124 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGG-ASF-------YSDWTQPPWAS 124 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCc-cce-------ecccccCcccc
Confidence 4689999999975543333344577889999999998 78888887654 2211 112 2222222
Q ss_pred -HHHHHHHHHH-----HhhhcCCCC--CCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 175 -LADFAVFITN-----LKQNLSAEA--SPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 175 -LaDla~Fi~~-----~k~~~~~~~--~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
--+.-.|+.. +.+.+.... ..--++|.|.||-=|-=+..|+|+.|..+.|=|+.+.
T Consensus 125 ~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 125 GPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred CccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 1122222211 111222212 2667899999998888899999988877766666653
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=71.59 E-value=47 Score=32.77 Aligned_cols=103 Identities=22% Similarity=0.219 Sum_probs=62.5
Q ss_pred CCCcEEEEe-CCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHH
Q 009631 104 RLGPIFLYC-GNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (530)
Q Consensus 104 ~~gPIfl~~-gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi 182 (530)
...|+|++| ||.|.+....+ +--+..-|...|-.+..+ -++ + ++ +--|.+|-+.|..+++
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~-clsiv~~a~~~gY~vasv---------gY~-l-----~~---q~htL~qt~~~~~~gv 125 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKM-CLSIVGPAVRRGYRVASV---------GYN-L-----CP---QVHTLEQTMTQFTHGV 125 (270)
T ss_pred CCccEEEEEecchhhcCchhc-ccchhhhhhhcCeEEEEe---------ccC-c-----Cc---ccccHHHHHHHHHHHH
Confidence 347888775 66654432211 122345566666555443 221 1 22 4568899999999999
Q ss_pred HHHhhhcCCCCCCEEEEec-chhHHHHH--HHHHHcCceeEEEEecccc
Q 009631 183 TNLKQNLSAEASPVVLFGG-SYGGMLAA--WMRLKYPHIAIGALASSAP 228 (530)
Q Consensus 183 ~~~k~~~~~~~~pwI~~GG-SY~GaLAa--W~R~kYP~lv~gavASSAp 228 (530)
.++-+.+. +.|+|+||| |-|.-||+ -+|+.-|- ++|++-+++.
T Consensus 126 ~filk~~~--n~k~l~~gGHSaGAHLa~qav~R~r~pr-I~gl~l~~Gv 171 (270)
T KOG4627|consen 126 NFILKYTE--NTKVLTFGGHSAGAHLAAQAVMRQRSPR-IWGLILLCGV 171 (270)
T ss_pred HHHHHhcc--cceeEEEcccchHHHHHHHHHHHhcCch-HHHHHHHhhH
Confidence 98876553 567788776 66666665 66766664 5666665554
No 134
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=71.07 E-value=9 Score=38.04 Aligned_cols=57 Identities=21% Similarity=0.243 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecc
Q 009631 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (530)
Q Consensus 169 Lt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASS 226 (530)
.+..+.++|+...+..++..-.....++.++|-|+||.+|--+--+.| .+.|+++--
T Consensus 87 ~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fy 143 (236)
T COG0412 87 VDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFY 143 (236)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEec
Confidence 444899999999999999765445568999999999999998888888 666666544
No 135
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=70.91 E-value=10 Score=40.83 Aligned_cols=110 Identities=18% Similarity=0.190 Sum_probs=65.9
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHH
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~ 184 (530)
..|++|++||--...... .....+.....|-+++.+|.=--|.|.-.+ + + ++ +=...|++-|. +..
T Consensus 189 p~P~VIv~gGlDs~qeD~--~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~-l-----~-~D--~~~l~~aVLd~---L~~ 254 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDL--YRLFRDYLAPRGIAMLTVDMPGQGESPKWP-L-----T-QD--SSRLHQAVLDY---LAS 254 (411)
T ss_dssp -EEEEEEE--TTS-GGGG--HHHHHCCCHHCT-EEEEE--TTSGGGTTT--S-------S---CCHHHHHHHHH---HHH
T ss_pred CCCEEEEeCCcchhHHHH--HHHHHHHHHhCCCEEEEEccCCCcccccCC-C-----C-cC--HHHHHHHHHHH---Hhc
Confidence 479999999886543211 123457777889999999998888873211 1 1 12 11234555443 222
Q ss_pred HhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccccc
Q 009631 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (530)
Q Consensus 185 ~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~a 231 (530)
+. -.+..++.++|-|.||..|.=.....|+-+.|.++-+|||..
T Consensus 255 ~p---~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 255 RP---WVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHH 298 (411)
T ss_dssp ST---TEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SC
T ss_pred CC---ccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhh
Confidence 22 123468999999999999998888899999999999999863
No 136
>PLN02761 lipase class 3 family protein
Probab=70.55 E-value=5.4 Score=44.10 Aligned_cols=41 Identities=22% Similarity=0.245 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R 212 (530)
+|.++.+..+++.........+.+++++|+|.|||||.-..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSA 312 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHH
Confidence 45555555544332111123456899999999999998655
No 137
>PLN02324 triacylglycerol lipase
Probab=70.55 E-value=5.6 Score=42.84 Aligned_cols=37 Identities=16% Similarity=0.286 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R 212 (530)
+|.++.+..+++ .+...+..++++|+|.|||||+-..
T Consensus 197 eqVl~eV~~L~~----~Yp~e~~sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 197 EQVQGELKRLLE----LYKNEEISITFTGHSLGAVMSVLSA 233 (415)
T ss_pred HHHHHHHHHHHH----HCCCCCceEEEecCcHHHHHHHHHH
Confidence 677777766554 3433345799999999999998665
No 138
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=70.34 E-value=11 Score=35.51 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=41.4
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH-HHcCceeEEEEeccccc
Q 009631 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR-LKYPHIAIGALASSAPI 229 (530)
Q Consensus 177 Dla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R-~kYP~lv~gavASSApv 229 (530)
|+...+..+.+.....+.++|++|+|.|..+++.+- ...+.-+.|++-=|+|-
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--S
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCC
Confidence 556788888877766677999999999999998776 88999999998866664
No 139
>COG1647 Esterase/lipase [General function prediction only]
Probab=67.24 E-value=37 Score=33.70 Aligned_cols=110 Identities=21% Similarity=0.218 Sum_probs=65.9
Q ss_pred CcEEEEeCCCCCc--ccccccchhH---hhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDI--EWFAVNSGFV---WDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAV 180 (530)
Q Consensus 106 gPIfl~~gGE~~~--~~~~~~~g~~---~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~ 180 (530)
.|.+|.-|+++-+ -++..++.-+ ++.-++.|-.|.+- ||=|.-.|-. .+.--|.+-=+.|+..
T Consensus 7 ~pf~f~~G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP--~ypGHG~~~e----------~fl~t~~~DW~~~v~d 74 (243)
T COG1647 7 KPFTFEGGNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAP--RYPGHGTLPE----------DFLKTTPRDWWEDVED 74 (243)
T ss_pred CCeeeccCCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecC--CCCCCCCCHH----------HHhcCCHHHHHHHHHH
Confidence 5666666664322 1232222223 33334445555553 4444433322 2223344555555555
Q ss_pred HHHHHhh-hcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccccccc
Q 009631 181 FITNLKQ-NLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFE 233 (530)
Q Consensus 181 Fi~~~k~-~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~a~~ 233 (530)
=-+++++ .| .-+-+.|-|.||-+|.|+...|| ..+.+.=|||+..+.
T Consensus 75 ~Y~~L~~~gy----~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~ 122 (243)
T COG1647 75 GYRDLKEAGY----DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKS 122 (243)
T ss_pred HHHHHHHcCC----CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccccc
Confidence 5555662 23 36888999999999999999999 899999999997554
No 140
>PLN02753 triacylglycerol lipase
Probab=67.19 E-value=6.8 Score=43.37 Aligned_cols=40 Identities=23% Similarity=0.338 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R 212 (530)
+|.++.+..+++..+.+ ..++.+++++|+|.|||||.-..
T Consensus 291 eQVl~eVkrLl~~Y~~e-~~~~~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 291 EQILTEVKRLVEEHGDD-DDSDLSITVTGHSLGGALAILSA 330 (531)
T ss_pred HHHHHHHHHHHHHcccc-cCCCceEEEEccCHHHHHHHHHH
Confidence 66677666665443321 11356899999999999998664
No 141
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=64.19 E-value=20 Score=39.47 Aligned_cols=106 Identities=20% Similarity=0.174 Sum_probs=60.6
Q ss_pred CCCcEEEEeCCCCCccc-ccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHH
Q 009631 104 RLGPIFLYCGNEGDIEW-FAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (530)
Q Consensus 104 ~~gPIfl~~gGE~~~~~-~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi 182 (530)
.+.||++||=|=+-.-+ ......-...||++-+..+|.+-||= | +++=| ++++.++-+.-.+.-.|-|+..=+
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRL-G---~lGfL--~~~~~~~~~~~~~n~Gl~DqilAL 165 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRL-G---ALGFL--DLSSLDTEDAFASNLGLLDQILAL 165 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCccc-c---cceee--ehhhccccccccccccHHHHHHHH
Confidence 35799998754432211 11101113588999889999999993 1 22221 000011111111224577777777
Q ss_pred HHHhhh---cCCCCCCEEEEecchhHHHHHHHHHHcC
Q 009631 183 TNLKQN---LSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (530)
Q Consensus 183 ~~~k~~---~~~~~~pwI~~GGSY~GaLAaW~R~kYP 216 (530)
+.++++ ++.+..-|-+||-|-|++-+++.- .+|
T Consensus 166 kWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Ll-a~P 201 (491)
T COG2272 166 KWVRDNIEAFGGDPQNVTLFGESAGAASILTLL-AVP 201 (491)
T ss_pred HHHHHHHHHhCCCccceEEeeccchHHHHHHhh-cCc
Confidence 777754 455667899999998888777754 344
No 142
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=64.06 E-value=12 Score=39.68 Aligned_cols=86 Identities=21% Similarity=0.225 Sum_probs=52.4
Q ss_pred cCCeEEeeece-eeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCC-CCCCEEEEecchhHHHH----
Q 009631 135 FGAMLVFPEHR-YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSA-EASPVVLFGGSYGGMLA---- 208 (530)
Q Consensus 135 ~ga~vv~lEHR-yYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~-~~~pwI~~GGSY~GaLA---- 208 (530)
-.|.||+++.= --|-|... ..+-..-+.+|+..|+..|++.+-..+.. .+.|+.++|-||||-..
T Consensus 84 ~~an~l~iD~PvGtGfS~~~---------~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a 154 (415)
T PF00450_consen 84 KFANLLFIDQPVGTGFSYGN---------DPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALA 154 (415)
T ss_dssp GTSEEEEE--STTSTT-EES---------SGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHH
T ss_pred cccceEEEeecCceEEeecc---------ccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhH
Confidence 34888888742 23333332 22335678999999999999988765543 45699999999999654
Q ss_pred HHHHHHc------CceeEEEEeccccc
Q 009631 209 AWMRLKY------PHIAIGALASSAPI 229 (530)
Q Consensus 209 aW~R~kY------P~lv~gavASSApv 229 (530)
..+...- +=-..|.+-.++-+
T Consensus 155 ~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 155 SYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred HhhhhccccccccccccccceecCccc
Confidence 4443333 22244555556554
No 143
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=63.85 E-value=15 Score=38.29 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=25.3
Q ss_pred CCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeece
Q 009631 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR 145 (530)
Q Consensus 105 ~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHR 145 (530)
+-|||++.=|=|.-...+ +.+-.+||. +|-.|.++|||
T Consensus 117 k~PvvvFSHGLggsRt~Y--Sa~c~~LAS-hG~VVaavEHR 154 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLY--SAYCTSLAS-HGFVVAAVEHR 154 (399)
T ss_pred CccEEEEecccccchhhH--HHHhhhHhh-CceEEEEeecc
Confidence 469999987666433221 223356665 78889999999
No 144
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=62.43 E-value=96 Score=32.20 Aligned_cols=105 Identities=18% Similarity=0.207 Sum_probs=59.9
Q ss_pred cEEEEeCCCCCcccccccchhHhhcchhc---CCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHH
Q 009631 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRF---GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (530)
Q Consensus 107 PIfl~~gGE~~~~~~~~~~g~~~~lA~~~---ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~ 183 (530)
.++|+|||=++-- .+.-++..||+.+ +=.+|.+.-| . |-.-+.+=|.+|=.+|++..|+
T Consensus 34 ~~llfIGGLtDGl---~tvpY~~~La~aL~~~~wsl~q~~Ls------------S---Sy~G~G~~SL~~D~~eI~~~v~ 95 (303)
T PF08538_consen 34 NALLFIGGLTDGL---LTVPYLPDLAEALEETGWSLFQVQLS------------S---SYSGWGTSSLDRDVEEIAQLVE 95 (303)
T ss_dssp SEEEEE--TT--T---T-STCHHHHHHHHT-TT-EEEEE--G------------G---GBTTS-S--HHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCC---CCCchHHHHHHHhccCCeEEEEEEec------------C---ccCCcCcchhhhHHHHHHHHHH
Confidence 4899999987532 1122345666655 3355554433 1 1235677788999999999999
Q ss_pred HHhhhcCC--CCCCEEEEecchhHHHHHHHHHHc-C----ceeEEEEecccccc
Q 009631 184 NLKQNLSA--EASPVVLFGGSYGGMLAAWMRLKY-P----HIAIGALASSAPIL 230 (530)
Q Consensus 184 ~~k~~~~~--~~~pwI~~GGSY~GaLAaW~R~kY-P----~lv~gavASSApv~ 230 (530)
+++..-.. ...|+|++|+|=|=--..-+-.+. | .-++|+|- =|||-
T Consensus 96 ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~IL-QApVS 148 (303)
T PF08538_consen 96 YLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAIL-QAPVS 148 (303)
T ss_dssp HHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEE-EEE--
T ss_pred HHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEE-eCCCC
Confidence 99976322 457999999999887777555444 3 56888887 44664
No 145
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=62.41 E-value=31 Score=35.28 Aligned_cols=83 Identities=30% Similarity=0.387 Sum_probs=53.5
Q ss_pred hhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCC-CCCCEEEEecchhHHHHHHH
Q 009631 133 PRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSA-EASPVVLFGGSYGGMLAAWM 211 (530)
Q Consensus 133 ~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~-~~~pwI~~GGSY~GaLAaW~ 211 (530)
=..|-.|++-.|-=.|. ||.+- -+.-+++-|.++=++++....+. .+.||+++|.|=||.=+.|.
T Consensus 23 L~~GyaVv~pDY~Glg~--~y~~~------------~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 23 LARGYAVVAPDYEGLGT--PYLNG------------RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred HHCCCEEEecCCCCCCC--cccCc------------HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHH
Confidence 35688888888775554 54331 13345556665555555543332 46799999999998887776
Q ss_pred HHH----cCce---eEEEEeccccc
Q 009631 212 RLK----YPHI---AIGALASSAPI 229 (530)
Q Consensus 212 R~k----YP~l---v~gavASSApv 229 (530)
... -|++ +.|+++.+.|.
T Consensus 89 A~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 89 AELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHHhHHhCcccccceeEEeccCCcc
Confidence 633 5788 57777766554
No 146
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=62.24 E-value=13 Score=37.06 Aligned_cols=73 Identities=26% Similarity=0.387 Sum_probs=56.3
Q ss_pred hhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHH
Q 009631 129 WDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLA 208 (530)
Q Consensus 129 ~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLA 208 (530)
...|.+-|=.|+..|-|--|+|.|... +-..++|+ +=|-.|+..-+..+++.. +..|-..+|+||||-+.
T Consensus 50 A~~a~~~Gf~Vlt~dyRG~g~S~p~~~------~~~~~~~~--DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~ 119 (281)
T COG4757 50 AAAAAKAGFEVLTFDYRGIGQSRPASL------SGSQWRYL--DWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQAL 119 (281)
T ss_pred HHHhhccCceEEEEecccccCCCcccc------ccCccchh--hhhhcchHHHHHHHHhhC--CCCceEEeeccccceee
Confidence 467777888999999999999999754 33445555 567788888888888654 45799999999999765
Q ss_pred HHH
Q 009631 209 AWM 211 (530)
Q Consensus 209 aW~ 211 (530)
.-+
T Consensus 120 gL~ 122 (281)
T COG4757 120 GLL 122 (281)
T ss_pred ccc
Confidence 543
No 147
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=61.51 E-value=36 Score=35.79 Aligned_cols=121 Identities=20% Similarity=0.232 Sum_probs=66.4
Q ss_pred EEEeecCCCCCCCCCcEeeEEEEeccccCCCCCCCcEEEE-eCCCCCccc--ccccchhHhhcchhcCCeEEeeeceeee
Q 009631 72 YFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLY-CGNEGDIEW--FAVNSGFVWDIAPRFGAMLVFPEHRYYG 148 (530)
Q Consensus 72 ~f~Q~lDHFn~~~~~TF~QRY~~n~~~~~~~~~~gPIfl~-~gGE~~~~~--~~~~~g~~~~lA~~~ga~vv~lEHRyYG 148 (530)
-.+-.++.|+.-..+.|+..---.. ..-|+++| -||=+-... .....++...+|.+.|+.+|+++-|===
T Consensus 63 ~~dv~~~~~~~l~vRly~P~~~~~~-------~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAP 135 (336)
T KOG1515|consen 63 SKDVTIDPFTNLPVRLYRPTSSSSE-------TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAP 135 (336)
T ss_pred eeeeEecCCCCeEEEEEcCCCCCcc-------cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCC
Confidence 4555667776544455544433222 12565555 555543332 2233567789999999999998766321
Q ss_pred cCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHH
Q 009631 149 ESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (530)
Q Consensus 149 ~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~k 214 (530)
+ .|++- .|....-| +..|.++.=.++..+-+++++.|-|-||++|+-.-++
T Consensus 136 E-h~~Pa-----------~y~D~~~A---l~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r 186 (336)
T KOG1515|consen 136 E-HPFPA-----------AYDDGWAA---LKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQR 186 (336)
T ss_pred C-CCCCc-----------cchHHHHH---HHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHH
Confidence 1 12222 12222222 2233332111234455679999999999999876543
No 148
>PLN00413 triacylglycerol lipase
Probab=61.48 E-value=12 Score=41.04 Aligned_cols=21 Identities=38% Similarity=0.513 Sum_probs=18.4
Q ss_pred CCCCEEEEecchhHHHHHHHH
Q 009631 192 EASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 192 ~~~pwI~~GGSY~GaLAaW~R 212 (530)
++.+++++|+|.|||||+.+-
T Consensus 282 p~~kliVTGHSLGGALAtLaA 302 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFT 302 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHH
Confidence 367999999999999999865
No 149
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=61.37 E-value=15 Score=35.48 Aligned_cols=56 Identities=27% Similarity=0.354 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecc
Q 009631 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (530)
Q Consensus 169 Lt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASS 226 (530)
-|.+|.-+|++..|++..+.-+ ..++|++|-|+|.-+.-..-..-|.-...-|+.-
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v 100 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQV 100 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhhCCHHHHhheeEE
Confidence 4779999999999999887764 4689999999999877776666676555555543
No 150
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=61.17 E-value=13 Score=41.02 Aligned_cols=61 Identities=26% Similarity=0.292 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHHHH--------Hhhh-cCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 168 YLTAEQALADFAVFITN--------LKQN-LSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 168 yLt~~QALaDla~Fi~~--------~k~~-~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+..-.|+|.|.++=..+ |.+. |..+...=-..|||=||=-+--..++||+.++|.+|+. |.
T Consensus 80 ~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAga-PA 149 (474)
T PF07519_consen 80 FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGA-PA 149 (474)
T ss_pred ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCC-ch
Confidence 44556677777665433 3233 44444567889999999999999999999999999966 54
No 151
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=60.28 E-value=18 Score=37.08 Aligned_cols=57 Identities=19% Similarity=0.292 Sum_probs=44.9
Q ss_pred CcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEecc
Q 009631 164 TTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (530)
Q Consensus 164 ~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASS 226 (530)
++.+|.|.+|--+++.....+++-+ -||-+|-.-|+.+=+=|.++||+.+.|-+-=+
T Consensus 75 ~~y~yPsmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn 131 (283)
T PF03096_consen 75 EGYQYPSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVN 131 (283)
T ss_dssp TT-----HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred ccccccCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEe
Confidence 4678999999999999999988854 48999999999999999999999999998644
No 152
>PLN02719 triacylglycerol lipase
Probab=55.93 E-value=14 Score=40.85 Aligned_cols=37 Identities=27% Similarity=0.431 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHhhhcC---CCCCCEEEEecchhHHHHHHHH
Q 009631 172 EQALADFAVFITNLKQNLS---AEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~---~~~~pwI~~GGSY~GaLAaW~R 212 (530)
+|.++.+...+ ..|. ..+.+++++|+|.|||||+-..
T Consensus 277 eQVl~eV~rL~----~~Ypd~~ge~~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 277 EQVLTEVKRLV----ERYGDEEGEELSITVTGHSLGGALAVLSA 316 (518)
T ss_pred HHHHHHHHHHH----HHCCcccCCcceEEEecCcHHHHHHHHHH
Confidence 55555554443 3443 1345899999999999998644
No 153
>PLN02934 triacylglycerol lipase
Probab=55.77 E-value=16 Score=40.36 Aligned_cols=21 Identities=33% Similarity=0.477 Sum_probs=18.5
Q ss_pred CCCCEEEEecchhHHHHHHHH
Q 009631 192 EASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 192 ~~~pwI~~GGSY~GaLAaW~R 212 (530)
++.+++++|+|.|||||+.+.
T Consensus 319 p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred CCCeEEEeccccHHHHHHHHH
Confidence 467999999999999999774
No 154
>PLN02162 triacylglycerol lipase
Probab=55.77 E-value=27 Score=38.33 Aligned_cols=20 Identities=40% Similarity=0.527 Sum_probs=17.6
Q ss_pred CCCCEEEEecchhHHHHHHH
Q 009631 192 EASPVVLFGGSYGGMLAAWM 211 (530)
Q Consensus 192 ~~~pwI~~GGSY~GaLAaW~ 211 (530)
++.+++++|+|.|||||+-+
T Consensus 276 p~~kliVTGHSLGGALAtLa 295 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALF 295 (475)
T ss_pred CCceEEEEecChHHHHHHHH
Confidence 35799999999999999875
No 155
>PRK04940 hypothetical protein; Provisional
Probab=54.58 E-value=28 Score=33.31 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcC
Q 009631 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (530)
Q Consensus 169 Lt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP 216 (530)
.+.++|++=+...|..+... + ...|++++|-|-||-.|.|+-.+|-
T Consensus 37 ~~P~~a~~~l~~~i~~~~~~-~-~~~~~~liGSSLGGyyA~~La~~~g 82 (180)
T PRK04940 37 LHPKHDMQHLLKEVDKMLQL-S-DDERPLICGVGLGGYWAERIGFLCG 82 (180)
T ss_pred CCHHHHHHHHHHHHHHhhhc-c-CCCCcEEEEeChHHHHHHHHHHHHC
Confidence 34567766555555433221 1 1247999999999999999999986
No 156
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=53.37 E-value=12 Score=36.00 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=38.0
Q ss_pred ceEEEecCCCCCCCCCCc-------ccCCCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHH
Q 009631 442 SNIIFSNGLLDPWSGGSV-------LQNLSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIE 514 (530)
Q Consensus 442 tniif~nG~~DPW~~~gv-------~~~~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~ 514 (530)
.-+++..|+.||+..... .+.........+-|| +.|..+.......|++.-+++.+++++.++
T Consensus 146 ~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~g----------a~HgF~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 146 APVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPG----------AGHGFANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT------------TTTTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred CCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCC----------CcccccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 579999999999976442 112244566777899 999988876665666655666665555554
Q ss_pred HH
Q 009631 515 GW 516 (530)
Q Consensus 515 ~W 516 (530)
+.
T Consensus 216 ~~ 217 (218)
T PF01738_consen 216 RH 217 (218)
T ss_dssp C-
T ss_pred hc
Confidence 43
No 157
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=49.59 E-value=27 Score=38.20 Aligned_cols=52 Identities=23% Similarity=0.265 Sum_probs=40.3
Q ss_pred ccCCCH---HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCcee
Q 009631 166 LSYLTA---EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIA 219 (530)
Q Consensus 166 L~yLt~---~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv 219 (530)
|.|.++ +|-+..++.+|+.+-+..+ ..|+|++++|.||.+.-.|...+|...
T Consensus 153 ls~~~~e~rd~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~~~~~ 207 (473)
T KOG2369|consen 153 LSYHNSEERDQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWVEAEG 207 (473)
T ss_pred hccCChhHHHHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhcccccc
Confidence 334554 5667788888777765543 379999999999999999999998865
No 158
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=48.66 E-value=23 Score=41.09 Aligned_cols=34 Identities=32% Similarity=0.501 Sum_probs=23.2
Q ss_pred EEEEecchhHHHHHHHHHHcCceeEEEEe----cccccc
Q 009631 196 VVLFGGSYGGMLAAWMRLKYPHIAIGALA----SSAPIL 230 (530)
Q Consensus 196 wI~~GGSY~GaLAaW~R~kYP~lv~gavA----SSApv~ 230 (530)
+|++|+||||..|- ....+|+.+.|+|. =|+|..
T Consensus 184 VILVGHSMGGiVAr-a~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 184 VILVGHSMGGIVAR-ATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred EEEEeccchhHHHH-HHHhhhhhccchhhhhhhhcCccc
Confidence 99999999997653 34566666666553 355554
No 159
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=45.93 E-value=28 Score=36.15 Aligned_cols=41 Identities=20% Similarity=0.314 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhhhcC-CCCCCEEEEecchhHH----HHHHHH
Q 009631 171 AEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGGM----LAAWMR 212 (530)
Q Consensus 171 ~~QALaDla~Fi~~~k~~~~-~~~~pwI~~GGSY~Ga----LAaW~R 212 (530)
.++| .|+..|++.+=+.+. ..+.|+-++|-||||. ||..+-
T Consensus 28 ~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~ 73 (319)
T PLN02213 28 ISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEIS 73 (319)
T ss_pred HHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHH
Confidence 3556 999999887654443 3678999999999995 555553
No 160
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=45.09 E-value=84 Score=31.86 Aligned_cols=101 Identities=24% Similarity=0.232 Sum_probs=57.5
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~ 185 (530)
=||+++++|-. +...+ -+.+...+|. +|-.||..+- |.-..+ ...--+++++..+.++
T Consensus 17 yPVv~f~~G~~-~~~s~-Ys~ll~hvAS-hGyIVV~~d~--~~~~~~-----------------~~~~~~~~~~~vi~Wl 74 (259)
T PF12740_consen 17 YPVVLFLHGFL-LINSW-YSQLLEHVAS-HGYIVVAPDL--YSIGGP-----------------DDTDEVASAAEVIDWL 74 (259)
T ss_pred cCEEEEeCCcC-CCHHH-HHHHHHHHHh-CceEEEEecc--cccCCC-----------------CcchhHHHHHHHHHHH
Confidence 58999999888 32221 1234445554 7888888772 221111 1111234444444443
Q ss_pred hh----hc----CCCCCCEEEEecchhHHHHHHHHHHc-----CceeEEEEeccccc
Q 009631 186 KQ----NL----SAEASPVVLFGGSYGGMLAAWMRLKY-----PHIAIGALASSAPI 229 (530)
Q Consensus 186 k~----~~----~~~~~pwI~~GGSY~GaLAaW~R~kY-----P~lv~gavASSApv 229 (530)
.+ .+ .++-+++-+.|+|-||-+|.=+-... +..+.|++. --||
T Consensus 75 ~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~-lDPV 130 (259)
T PF12740_consen 75 AKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALIL-LDPV 130 (259)
T ss_pred HhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEE-eccc
Confidence 32 22 23445899999999999998666666 445666655 3355
No 161
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted. Also, a member has been identified in Caulobacter crescentus (Caulobacter vibrioides) (Q9AAT9 from SWISSPROT). These proteins may be related to IPR001910 from INTERPRO.; PDB: 2YHG_A.
Probab=45.05 E-value=33 Score=34.69 Aligned_cols=51 Identities=22% Similarity=0.227 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHHHHHh-hhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEE
Q 009631 170 TAEQALADFAVFITNLK-QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGAL 223 (530)
Q Consensus 170 t~~QALaDla~Fi~~~k-~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gav 223 (530)
|+.|||-|+..=...-. +.+ -+|..++.-|-.=.-.+|+|..||++++-..
T Consensus 127 tlAqAL~~i~~~~~~~~~~~~---~~Klrvy~I~dQDdtg~wIr~~fP~l~yI~s 178 (260)
T PF07632_consen 127 TLAQALWDIKETRSPEEAARF---VSKLRVYSISDQDDTGAWIRKNFPDLFYIES 178 (260)
T ss_dssp HHHHHHHHHHHHS-HHHHHHH---HHTEEEEEES--SHHHHHHHHH-TTSEEEEE
T ss_pred HHHHHHHHHHHhcCHHHHHHH---HhhEEEEeccCCcchhhHHHHhCCCeEEEEe
Confidence 67899988433221110 001 0255565555555569999999999997654
No 162
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=44.46 E-value=31 Score=36.26 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHH
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R 212 (530)
+|..+|+...+. .+. +-.++++|+|-|||||.-+.
T Consensus 155 ~~~~~~~~~L~~----~~~--~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 155 SGLDAELRRLIE----LYP--NYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred HHHHHHHHHHHH----hcC--CcEEEEecCChHHHHHHHHH
Confidence 455555554443 332 56899999999999998654
No 163
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=44.10 E-value=30 Score=35.60 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=27.0
Q ss_pred CCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 192 EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 192 ~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+++...+.|+|.||++|+-+-..|- .-+||-++|=
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPG 308 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPG 308 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC---CceEEecCch
Confidence 5789999999999999999877763 2345556664
No 164
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=44.10 E-value=30 Score=35.60 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=27.0
Q ss_pred CCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 192 EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 192 ~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
+++...+.|+|.||++|+-+-..|- .-+||-++|=
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPG 308 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPG 308 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC---CceEEecCch
Confidence 5789999999999999999877763 2345556664
No 165
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=42.76 E-value=36 Score=33.57 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
.+..+.++.||..+...-. +||=++|+|.||++|-|+-+..
T Consensus 56 ~~~~~~l~~fI~~Vl~~TG---akVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 56 CESAKQLRAFIDAVLAYTG---AKVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHT-----EEEEEETCHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHhhC---CEEEEEEcCCcCHHHHHHHHHc
Confidence 3444899999998875433 3999999999999999987644
No 166
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=42.03 E-value=31 Score=37.63 Aligned_cols=66 Identities=18% Similarity=0.205 Sum_probs=40.3
Q ss_pred CCeEEeee-ceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCC-CCCCEEEEecchhHH----HHH
Q 009631 136 GAMLVFPE-HRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSA-EASPVVLFGGSYGGM----LAA 209 (530)
Q Consensus 136 ga~vv~lE-HRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~-~~~pwI~~GGSY~Ga----LAa 209 (530)
.|.+|++| ==--|-|.... .-.+.+-+++++|+..|++.+=+.+.. .+.|+.++|-||||. ||.
T Consensus 115 ~anllfiDqPvGtGfSy~~~----------~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKT----------PIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred cCcEEEecCCCCCCccCCCC----------CCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHH
Confidence 46777777 33335553211 112333333348999998876444432 567999999999996 555
Q ss_pred HH
Q 009631 210 WM 211 (530)
Q Consensus 210 W~ 211 (530)
-+
T Consensus 185 ~i 186 (433)
T PLN03016 185 EI 186 (433)
T ss_pred HH
Confidence 54
No 167
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=39.33 E-value=47 Score=32.33 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHH
Q 009631 168 YLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 168 yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~ 213 (530)
+-.++.....++..|....+.......|.+.+|+|.||-++-++-.
T Consensus 52 ~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 52 FDGIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred chhhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 4456666666666665555444444569999999999999876543
No 168
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=37.74 E-value=2e+02 Score=30.95 Aligned_cols=127 Identities=21% Similarity=0.174 Sum_probs=64.2
Q ss_pred eEEEEeccccCCCCCCCcEEEEeCCCCCcccc--------------cc--cchhHhhcchhcCCeEEeeeceeeecCCCC
Q 009631 90 QRYLINTDHWVGPNRLGPIFLYCGNEGDIEWF--------------AV--NSGFVWDIAPRFGAMLVFPEHRYYGESMPY 153 (530)
Q Consensus 90 QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~--------------~~--~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~ 153 (530)
-=|..-.+--++| .|.+|++-|.|..... .. +.++-.++| +.|-.+|++.-+.||+..+-
T Consensus 102 paylLvPd~~~~p---~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA-k~GYVvla~D~~g~GER~~~ 177 (390)
T PF12715_consen 102 PAYLLVPDGAKGP---FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA-KRGYVVLAPDALGFGERGDM 177 (390)
T ss_dssp EEEEEEETT--S----EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH-TTTSEEEEE--TTSGGG-SS
T ss_pred EEEEEecCCCCCC---CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH-hCCCEEEEEccccccccccc
Confidence 3354444433443 7999998887643110 00 111223455 57999999999999998764
Q ss_pred CCccccccCCCcccCCCHHHHHH----------------HHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCc
Q 009631 154 GSTEVAYQNATTLSYLTAEQALA----------------DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH 217 (530)
Q Consensus 154 ~~l~~~~~st~nL~yLt~~QALa----------------Dla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~ 217 (530)
... ..++-..-|+|+ |.-.-+.+++..-.-+..++.++|-|.||..+-|.-..-|.
T Consensus 178 e~~--------~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdR 249 (390)
T PF12715_consen 178 EGA--------AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDR 249 (390)
T ss_dssp CCC--------TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT
T ss_pred ccc--------ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchh
Confidence 431 011111122222 22223344443222244589999999999998888888888
Q ss_pred eeEEEEeccccc
Q 009631 218 IAIGALASSAPI 229 (530)
Q Consensus 218 lv~gavASSApv 229 (530)
+ .++++++...
T Consensus 250 I-ka~v~~~~l~ 260 (390)
T PF12715_consen 250 I-KATVANGYLC 260 (390)
T ss_dssp ---EEEEES-B-
T ss_pred h-HhHhhhhhhh
Confidence 7 6666666654
No 169
>PRK10673 acyl-CoA esterase; Provisional
Probab=37.09 E-value=38 Score=32.66 Aligned_cols=56 Identities=16% Similarity=0.299 Sum_probs=37.2
Q ss_pred ceEEEecCCCCCCCCCCcccC---CCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 009631 442 SNIIFSNGLLDPWSGGSVLQN---LSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWID 518 (530)
Q Consensus 442 tniif~nG~~DPW~~~gv~~~---~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~~Wl~ 518 (530)
-.+++++|+.||+......+. .-++....+++| ++|..-+ ++| +++.+.|++||+
T Consensus 196 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~----------~gH~~~~-----~~p-------~~~~~~l~~fl~ 253 (255)
T PRK10673 196 HPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAG----------AGHWVHA-----EKP-------DAVLRAIRRYLN 253 (255)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCC----------CCCeeec-----cCH-------HHHHHHHHHHHh
Confidence 479999999999966433221 123456678899 9997533 233 356677788876
Q ss_pred H
Q 009631 519 N 519 (530)
Q Consensus 519 ~ 519 (530)
+
T Consensus 254 ~ 254 (255)
T PRK10673 254 D 254 (255)
T ss_pred c
Confidence 4
No 170
>COG3544 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.20 E-value=37 Score=32.53 Aligned_cols=23 Identities=26% Similarity=0.634 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Q 009631 501 WLKKQRETEIKLIEGWIDNYYRG 523 (530)
Q Consensus 501 ~l~~ar~~i~~~i~~Wl~~~~~~ 523 (530)
++.++++.++++++.||++|+.+
T Consensus 168 ~II~aQ~aEI~qM~qwl~~~~~~ 190 (190)
T COG3544 168 QIIEAQEAEINQMEQWLKAWYGQ 190 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHccCC
Confidence 56777888888899999999863
No 171
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=35.76 E-value=64 Score=30.85 Aligned_cols=50 Identities=30% Similarity=0.466 Sum_probs=36.5
Q ss_pred HHHHHHHHhhhcCCCCCCEEEEecchhHHHHH-HHHHHcCceeEEEEecccc
Q 009631 178 FAVFITNLKQNLSAEASPVVLFGGSYGGMLAA-WMRLKYPHIAIGALASSAP 228 (530)
Q Consensus 178 la~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAa-W~R~kYP~lv~gavASSAp 228 (530)
++..+..+.+..+....|.|++++|.|..+++ |..++-+ -|.|++.=+.|
T Consensus 43 ~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~~-~V~GalLVApp 93 (181)
T COG3545 43 LDDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQR-QVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHHhhhh-ccceEEEecCC
Confidence 34566666666666667899999999999998 7777776 67777654433
No 172
>PLN02847 triacylglycerol lipase
Probab=32.12 E-value=48 Score=37.50 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=23.7
Q ss_pred CCCCEEEEecchhHHHHHHHHH------HcCceeEEEEe
Q 009631 192 EASPVVLFGGSYGGMLAAWMRL------KYPHIAIGALA 224 (530)
Q Consensus 192 ~~~pwI~~GGSY~GaLAaW~R~------kYP~lv~gavA 224 (530)
++-+.|++|+|.||++|+-+-. .+|.+..=+.|
T Consensus 249 PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFg 287 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFA 287 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEec
Confidence 4579999999999999986543 36665544444
No 173
>PHA02857 monoglyceride lipase; Provisional
Probab=31.46 E-value=62 Score=31.84 Aligned_cols=59 Identities=25% Similarity=0.246 Sum_probs=40.8
Q ss_pred ceEEEecCCCCCCCCCCcc----cCCCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 009631 442 SNIIFSNGLLDPWSGGSVL----QNLSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWI 517 (530)
Q Consensus 442 tniif~nG~~DPW~~~gv~----~~~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~~Wl 517 (530)
--|++++|+.|++-..... +.........++++ +.|..=+ +....|+++.+.|.+||
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~----------~gH~~~~---------e~~~~~~~~~~~~~~~l 270 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEG----------AKHHLHK---------ETDEVKKSVMKEIETWI 270 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCC----------CcccccC---------CchhHHHHHHHHHHHHH
Confidence 5899999999999653322 12222355678999 9996422 11256889999999999
Q ss_pred HH
Q 009631 518 DN 519 (530)
Q Consensus 518 ~~ 519 (530)
+.
T Consensus 271 ~~ 272 (276)
T PHA02857 271 FN 272 (276)
T ss_pred HH
Confidence 86
No 174
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=31.43 E-value=35 Score=35.25 Aligned_cols=50 Identities=22% Similarity=0.377 Sum_probs=36.9
Q ss_pred HHHHHhhhcCC--CCCCEEEEecchhHHHHHHHHHHcCceeEEEEecccccc
Q 009631 181 FITNLKQNLSA--EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (530)
Q Consensus 181 Fi~~~k~~~~~--~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~ 230 (530)
.+-+++..+.- ...-=++.|-|+||..|-|.-+.||+.|-=.++.|+-+.
T Consensus 162 LlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 162 LLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred hhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 34445555542 112468999999999999999999999977777776654
No 175
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=29.70 E-value=1.3e+02 Score=33.22 Aligned_cols=116 Identities=19% Similarity=0.123 Sum_probs=64.0
Q ss_pred CcEEEEeCCCCCcccccc--cchhHhhcchhcCCeEEeeecee--eecCCCCCCccccccCCCcccCCCHHHHHHHHHHH
Q 009631 106 GPIFLYCGNEGDIEWFAV--NSGFVWDIAPRFGAMLVFPEHRY--YGESMPYGSTEVAYQNATTLSYLTAEQALADFAVF 181 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~--~~g~~~~lA~~~ga~vv~lEHRy--YG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~F 181 (530)
-||++|+=|.+-...... +......++.+-+-.+|.+..|= +| -.-+++. - ...|+......+||.=+..-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lG-F~st~d~---~-~~gN~gl~Dq~~AL~wv~~~ 186 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLG-FLSTGDS---A-APGNLGLFDQLLALRWVKDN 186 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceece-eeecCCC---C-CCCcccHHHHHHHHHHHHHH
Confidence 599998855543222110 11223356666678889999884 22 0001111 0 12466665444444322222
Q ss_pred HHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcC---ceeEEEEeccccccc
Q 009631 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP---HIAIGALASSAPILQ 231 (530)
Q Consensus 182 i~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP---~lv~gavASSApv~a 231 (530)
| ..++.+..++.++|.|.||+.+..+- .-| ++|..++.=|++.+.
T Consensus 187 I----~~FGGdp~~vTl~G~saGa~~v~~l~-~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 187 I----PSFGGDPKNVTLFGHSAGAASVSLLT-LSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred H----HhcCCCCCeEEEEeechhHHHHHHHh-cCHhhHHHHHHHHhhcccccc
Confidence 2 23455667999999999998776543 222 677777777777653
No 176
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=29.42 E-value=2.9e+02 Score=25.10 Aligned_cols=23 Identities=39% Similarity=0.602 Sum_probs=19.1
Q ss_pred CCCEEEEecchhHHHHHHHHHHc
Q 009631 193 ASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 193 ~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
..|++++|.|+||.++..+-.+.
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHH
Confidence 46999999999999997666654
No 177
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=29.39 E-value=2.2e+02 Score=32.17 Aligned_cols=85 Identities=8% Similarity=0.006 Sum_probs=59.8
Q ss_pred HhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHH
Q 009631 128 VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGML 207 (530)
Q Consensus 128 ~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 207 (530)
+.+++-+.|=-|+++.-|. |.. ..++++.+.=+..+..-++.++...+ ..++.++|.|.||.|
T Consensus 239 lVr~lv~qG~~VflIsW~n-----P~~----------~~r~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl 301 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRN-----PDK----------AHREWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLT 301 (560)
T ss_pred HHHHHHHcCCeEEEEeCCC-----CCh----------hhcCCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHH
Confidence 4566667788999999876 322 23677877777666666666665433 358999999999998
Q ss_pred HHH----HHHHcCc-eeEEEEeccccc
Q 009631 208 AAW----MRLKYPH-IAIGALASSAPI 229 (530)
Q Consensus 208 AaW----~R~kYP~-lv~gavASSApv 229 (530)
++- +..++|+ -|...+-=.+|+
T Consensus 302 ~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 302 CAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred HHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 885 8889996 466555445555
No 178
>PF03283 PAE: Pectinacetylesterase
Probab=29.09 E-value=2e+02 Score=30.62 Aligned_cols=36 Identities=33% Similarity=0.522 Sum_probs=24.1
Q ss_pred CEEEEecchhHHH----HHHHHHHcC-ceeEEEEecccccc
Q 009631 195 PVVLFGGSYGGML----AAWMRLKYP-HIAIGALASSAPIL 230 (530)
Q Consensus 195 pwI~~GGSY~GaL----AaW~R~kYP-~lv~gavASSApv~ 230 (530)
.+|+.|+|-||-= +-++|..+| ..-.-.++-|+..+
T Consensus 157 ~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 157 QVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred eEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 6777777766532 336789999 55556667777765
No 179
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=27.98 E-value=1.3e+02 Score=31.21 Aligned_cols=41 Identities=12% Similarity=0.318 Sum_probs=28.6
Q ss_pred CcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeece--eeecCC
Q 009631 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR--YYGESM 151 (530)
Q Consensus 106 gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHR--yYG~S~ 151 (530)
.+|++++|.-|.. .+.+...||+++|+.+|..-.+ |.|-+.
T Consensus 4 ~~~i~i~GptgsG-----Kt~la~~la~~~~~~iis~Ds~Qvy~~l~i 46 (307)
T PRK00091 4 PKVIVIVGPTASG-----KTALAIELAKRLNGEIISADSMQVYRGMDI 46 (307)
T ss_pred ceEEEEECCCCcC-----HHHHHHHHHHhCCCcEEeccccceeecccc
Confidence 4678888755532 2346679999999999988876 444443
No 180
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=25.20 E-value=98 Score=35.18 Aligned_cols=41 Identities=17% Similarity=0.098 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHH
Q 009631 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (530)
Q Consensus 172 ~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~k 214 (530)
++-...|...|+.+.+..+ +.|||++|+|+||.++-.|-..
T Consensus 193 d~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred hHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHHHHh
Confidence 5555666666666554322 4699999999999998876543
No 181
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.01 E-value=3.1e+02 Score=27.99 Aligned_cols=111 Identities=13% Similarity=0.139 Sum_probs=55.2
Q ss_pred CcEeeEEEEeccccCCCCCCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCC-CccccccCCC
Q 009631 86 PTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG-STEVAYQNAT 164 (530)
Q Consensus 86 ~TF~QRY~~n~~~~~~~~~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~-~l~~~~~st~ 164 (530)
.-|.-.+|+.... ...|+|++|.|.--.. ||..+.|+++--.++.= -|+|--|.--- .+..+++...
T Consensus 14 si~~~~~~v~~~~-----~~~~li~~IpGNPG~~------gFY~~F~~~L~~~l~~r-~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 14 SILTLKPWVTKSG-----EDKPLIVWIPGNPGLL------GFYTEFARHLHLNLIDR-LPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeeeeccCC-----CCceEEEEecCCCCch------hHHHHHHHHHHHhcccc-cceeEEeccccccCCccccccc
Confidence 4577778886654 3489999998874333 44444444332222210 23554443110 1000111222
Q ss_pred cccCCCHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHH
Q 009631 165 TLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (530)
Q Consensus 165 nL~yLt~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~ 213 (530)
+.+ -.-.=.|+|-+.=--.+-+++.+++.|.+++|+|-| |||-+
T Consensus 82 s~~-~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiG----aYm~L 125 (301)
T KOG3975|consen 82 SHT-NEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIG----AYMVL 125 (301)
T ss_pred ccc-cccccchhhHHHHHHHHHHHhCCCCCEEEEEecchh----HHHHH
Confidence 222 111224455443322233456678889999999965 56553
No 182
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=24.99 E-value=3.1e+02 Score=29.41 Aligned_cols=19 Identities=37% Similarity=0.560 Sum_probs=16.2
Q ss_pred CCCEEEEecchhHHHHHHH
Q 009631 193 ASPVVLFGGSYGGMLAAWM 211 (530)
Q Consensus 193 ~~pwI~~GGSY~GaLAaW~ 211 (530)
+..++++|-|-||.|+.=+
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~ 212 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSF 212 (374)
T ss_pred CCeEEEEecCccHHHHHHH
Confidence 4689999999999998744
No 183
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.94 E-value=63 Score=30.93 Aligned_cols=109 Identities=21% Similarity=0.199 Sum_probs=68.0
Q ss_pred CCCcEEEEeCCCCCcccccccchhHhhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCC-----CHHHHHHHH
Q 009631 104 RLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYL-----TAEQALADF 178 (530)
Q Consensus 104 ~~gPIfl~~gGE~~~~~~~~~~g~~~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yL-----t~~QALaDl 178 (530)
.|.||+++--..|.-..+ .+.|.+..+|..+-+-.|.| |--| .+ +.=.+| +.+|+=.--
T Consensus 25 aG~pVvvFpts~Grf~ey-ed~G~v~ala~fie~G~vQl----ft~~----gl-------dsESf~a~h~~~adr~~rH~ 88 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEY-EDFGMVDALASFIEEGLVQL----FTLS----GL-------DSESFLATHKNAADRAERHR 88 (227)
T ss_pred CCCcEEEEecCCCcchhh-hhcccHHHHHHHHhcCcEEE----EEec----cc-------chHhHhhhcCCHHHHHHHHH
Confidence 468998886555543322 34577778888776655543 2111 11 111233 234443334
Q ss_pred HHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccccc
Q 009631 179 AVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (530)
Q Consensus 179 a~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv~a 231 (530)
|++.=-+++.+. ..-|+.|+|.||-.|+=|-..+||++-+.||=|++--+
T Consensus 89 AyerYv~eEalp---gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 89 AYERYVIEEALP---GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHhhcC---CCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 444332333332 23689999999999999999999999999999998754
No 184
>PF02419 PsbL: PsbL protein; InterPro: IPR003372 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbL found in PSII. PsbL is located in a gene cluster with PsbE, PsbF and PsbJ (PsbEFJL). Both PsbL and PsbJ (IPR002682 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbL prevent the formation of both PSII core dimers and PSII-light harvesting complex []. In addition, both PsbL and PsbJ are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_L 3A0B_l 3ARC_l 1S5L_l 2AXT_l 3BZ2_L 4FBY_L 3PRQ_L 3PRR_L 3KZI_L ....
Probab=23.35 E-value=87 Score=21.91 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=15.8
Q ss_pred ccccchhhHHHHHHHHHHHhh
Q 009631 8 NQNSLYLSPVITIVIISILSP 28 (530)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ 28 (530)
|.-||||.+++++++.++++.
T Consensus 13 NRTSLY~GLllifvl~vLFss 33 (37)
T PF02419_consen 13 NRTSLYWGLLLIFVLAVLFSS 33 (37)
T ss_dssp -CCHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHhhh
Confidence 456999999988877776654
No 185
>PRK00753 psbL photosystem II reaction center L; Provisional
Probab=23.09 E-value=79 Score=22.25 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=16.1
Q ss_pred ccccchhhHHHHHHHHHHHhh
Q 009631 8 NQNSLYLSPVITIVIISILSP 28 (530)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ 28 (530)
|.-||||-+++++++.++++.
T Consensus 15 NRTSLy~GlLlifvl~vLFss 35 (39)
T PRK00753 15 NRTSLYLGLLLVFVLGILFSS 35 (39)
T ss_pred chhhHHHHHHHHHHHHHHHHh
Confidence 456999999988877766653
No 186
>smart00580 PUG domain in protein kinases, N-glycanases and other nuclear proteins.
Probab=22.74 E-value=25 Score=27.17 Aligned_cols=47 Identities=15% Similarity=0.277 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhhhcCCC--CCCEEEEecchhHHHHHHHHHHcCceeE
Q 009631 174 ALADFAVFITNLKQNLSAE--ASPVVLFGGSYGGMLAAWMRLKYPHIAI 220 (530)
Q Consensus 174 ALaDla~Fi~~~k~~~~~~--~~pwI~~GGSY~GaLAaW~R~kYP~lv~ 220 (530)
++.||-..++++.+.+.-. +...---=||.+|++.-.+...||++..
T Consensus 2 sv~dLLr~irNi~~hp~e~k~n~~~~~~l~~~pg~~~~l~~~gFp~l~~ 50 (58)
T smart00580 2 SVRDLLRALRNILHHPREEKGNPAIKERLGDVPGGFELYFTVGFPRLLI 50 (58)
T ss_pred cHHHHHHHHHHHhhCcchhhcCHHHHHHhcCCCcHHHHHHHcCCCcccc
Confidence 5789999999998766533 2222223378999999999999999864
No 187
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=22.68 E-value=1.5e+02 Score=30.70 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=41.5
Q ss_pred ceEEEecCCCCCCCCCCcc----cCC-CCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 009631 442 SNIIFSNGLLDPWSGGSVL----QNL-SETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGW 516 (530)
Q Consensus 442 tniif~nG~~DPW~~~gv~----~~~-s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~~W 516 (530)
.-+++++|+.|+....... +.. ++.....++|| ++|+.=+ ++|+ +.++++.+.|.+|
T Consensus 280 ~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~----------~gH~l~~-----e~p~---~~~~~v~~~i~~w 341 (349)
T PLN02385 280 LPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYED----------AYHSILE-----GEPD---EMIFQVLDDIISW 341 (349)
T ss_pred CCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCC----------Ceeeccc-----CCCh---hhHHHHHHHHHHH
Confidence 6899999999998654332 111 23455678999 9997422 2333 3356788889999
Q ss_pred HHHHh
Q 009631 517 IDNYY 521 (530)
Q Consensus 517 l~~~~ 521 (530)
|.+.-
T Consensus 342 L~~~~ 346 (349)
T PLN02385 342 LDSHS 346 (349)
T ss_pred HHHhc
Confidence 98754
No 188
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=22.47 E-value=60 Score=36.94 Aligned_cols=61 Identities=21% Similarity=0.312 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhh-cCCCCCCEEEEecchhHHHHHHHHHHcCceeEEEEeccccc
Q 009631 168 YLTAEQALADFAVFITNLKQN-LSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (530)
Q Consensus 168 yLt~~QALaDla~Fi~~~k~~-~~~~~~pwI~~GGSY~GaLAaW~R~kYP~lv~gavASSApv 229 (530)
.+.=++.++|+..=++.+-.+ |. ...+--+.|||-||-|++=.-..-|+||-+++|-.+.+
T Consensus 523 lakKqN~f~Dfia~AeyLve~gyt-~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 523 LAKKQNSFDDFIACAEYLVENGYT-QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred hhhhcccHHHHHHHHHHHHHcCCC-CccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 444566788877777766543 43 45688899999999999999999999999999876444
No 189
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=21.87 E-value=1.2e+02 Score=30.60 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHHHHHHHHHc
Q 009631 173 QALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (530)
Q Consensus 173 QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaLAaW~R~kY 215 (530)
+=.+=+...++.++++|.. ..+=++|+|+||..+..+-..|
T Consensus 84 ~qa~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~ 124 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENY 124 (255)
T ss_dssp HHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHh
Confidence 3334455556667777763 4677899999999999887774
No 190
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.85 E-value=1.4e+02 Score=31.14 Aligned_cols=55 Identities=13% Similarity=0.128 Sum_probs=37.2
Q ss_pred ceEEEecCCCCCCCCCCc----ccCCCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 009631 442 SNIIFSNGLLDPWSGGSV----LQNLSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWI 517 (530)
Q Consensus 442 tniif~nG~~DPW~~~gv----~~~~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~~Wl 517 (530)
-.|+.+.|+.|||-..-- .+. .++....+|+| +.||.-+- .|+ .+.+.|..|+
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~~~~~-~pn~~~~~I~~----------~gH~~h~e-----~Pe-------~~~~~i~~Fi 321 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEELKKK-LPNAELVEIPG----------AGHLPHLE-----RPE-------EVAALLRSFI 321 (326)
T ss_pred CceEEEEcCcCCccCHHHHHHHHhh-CCCceEEEeCC----------CCcccccC-----CHH-------HHHHHHHHHH
Confidence 369999999999965331 222 25667788999 99996662 233 4555666666
Q ss_pred HH
Q 009631 518 DN 519 (530)
Q Consensus 518 ~~ 519 (530)
..
T Consensus 322 ~~ 323 (326)
T KOG1454|consen 322 AR 323 (326)
T ss_pred HH
Confidence 54
No 191
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=21.80 E-value=1.7e+02 Score=27.58 Aligned_cols=88 Identities=17% Similarity=0.166 Sum_probs=56.8
Q ss_pred hhcchhcCCeEEeeeceeeecCCCCCCccccccCCCcccCC-CHHHHHHHHHHHHHHHhhhcCCCCCCEEEEecchhHHH
Q 009631 129 WDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYL-TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGML 207 (530)
Q Consensus 129 ~~lA~~~ga~vv~lEHRyYG~S~P~~~l~~~~~st~nL~yL-t~~QALaDla~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 207 (530)
..++++.|+..+.++ | .+|+- +.....|. |..+..+++...|+..... .++.|.|+.|-|=|++.
T Consensus 29 ~~l~~~~g~~~~~~~----~--V~YpA------~~~~~~y~~S~~~G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V 94 (179)
T PF01083_consen 29 DALQAQPGGTSVAVQ----G--VEYPA------SLGPNSYGDSVAAGVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMV 94 (179)
T ss_dssp HHHHHHCTTCEEEEE----E----S---------SCGGSCHHHHHHHHHHHHHHHHHHHHH--STTSEEEEEEETHHHHH
T ss_pred HHHHhhcCCCeeEEE----e--cCCCC------CCCcccccccHHHHHHHHHHHHHHHHHh--CCCCCEEEEecccccHH
Confidence 467778887766544 2 33443 12222343 4588899999988877655 35789999999999999
Q ss_pred HHHHHHH------cCceeEEEEecccccc
Q 009631 208 AAWMRLK------YPHIAIGALASSAPIL 230 (530)
Q Consensus 208 AaW~R~k------YP~lv~gavASSApv~ 230 (530)
+.-.... ..+-+.|++--.-|..
T Consensus 95 ~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 95 VGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 9966544 4556666666666654
No 192
>CHL00038 psbL photosystem II protein L
Probab=21.29 E-value=91 Score=21.88 Aligned_cols=21 Identities=29% Similarity=0.520 Sum_probs=16.1
Q ss_pred ccccchhhHHHHHHHHHHHhh
Q 009631 8 NQNSLYLSPVITIVIISILSP 28 (530)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ 28 (530)
|.-||||-+++++++.++++.
T Consensus 14 NRTSLy~GLLlifvl~vlfss 34 (38)
T CHL00038 14 NRTSLYWGLLLIFVLAVLFSN 34 (38)
T ss_pred hhhhHHHHHHHHHHHHHHHHH
Confidence 456999999988877766653
No 193
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=20.90 E-value=1.3e+02 Score=28.31 Aligned_cols=55 Identities=13% Similarity=0.078 Sum_probs=34.8
Q ss_pred ceEEEecCCCCCCCCCCccc---CCCCcceEEEecCCcccccccCCCCccccCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 009631 442 SNIIFSNGLLDPWSGGSVLQ---NLSETIVALVTEEEAINTFCHSSGAHHLDLRPSTNEDPDWLKKQRETEIKLIEGWID 518 (530)
Q Consensus 442 tniif~nG~~DPW~~~gv~~---~~s~~~~~~vi~g~~~~~~~~~~~~Hc~Dl~~~~~~Dp~~l~~ar~~i~~~i~~Wl~ 518 (530)
-.+++++|+.|++......+ ..-++...+++++ ++|...+- +| +++.+.|.+||+
T Consensus 199 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~----------~gH~~~~~-----~~-------~~~~~~i~~fl~ 256 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPY----------GGHASNVT-----DP-------ETFNRALLDFLK 256 (257)
T ss_pred ccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECC----------CCCCcccc-----CH-------HHHHHHHHHHhc
Confidence 58999999999996532211 1123345677899 99986542 33 345666777764
Done!