BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009633
(530 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 14/66 (21%)
Query: 443 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 502
I++ G GE+V V GSF+ W +I++ KS ++ +L L PGT KF
Sbjct: 103 IRWRGGGEVVYVTGSFSRWKKKIQL--------------LKSEDYTVLLQLRPGTQRFKF 148
Query: 503 IVDGQW 508
+VDG W
Sbjct: 149 LVDGIW 154
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 22/126 (17%)
Query: 412 TEINKAEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHR 464
+I +E++ + + EE +A + L + Q ++G G+ V ++GSFN W
Sbjct: 44 ADIFHSEEIKAPEKEEFLAWQHDLEANDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKL 103
Query: 465 IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGIC 523
PL +R + +L L G ++ KF VDGQW DP VT + G
Sbjct: 104 ----PL----------TRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTV 149
Query: 524 NNILRV 529
NNI++V
Sbjct: 150 NNIIQV 155
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 22/125 (17%)
Query: 413 EINKAEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHRI 465
+I E++ + + EE +A + L E Q ++G G+ V ++GSFN W
Sbjct: 45 DIFHTEEMKAPEKEEFLAWQHDLEVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKL- 103
Query: 466 KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGICN 524
PL +R + +L L G ++ KF VDGQW DP VT + G N
Sbjct: 104 ---PL----------TRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVN 150
Query: 525 NILRV 529
NI++V
Sbjct: 151 NIIQV 155
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 443 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 502
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF
Sbjct: 81 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHND--FVAILDLPEGEHQYKF 127
Query: 503 IVDGQWKVDPQRESVT-KGGICNNILRV 529
VDGQW DP VT + G NN++ V
Sbjct: 128 FVDGQWVHDPSEPVVTSQLGTINNLIHV 155
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 443 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 502
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF
Sbjct: 80 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHND--FVAILDLPEGEHQYKF 126
Query: 503 IVDGQWKVDPQRESVT-KGGICNNILRV 529
VDGQW DP VT + G NN++ V
Sbjct: 127 FVDGQWVHDPSEPVVTSQLGTINNLIHV 154
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 443 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 502
I++S G+ V ++GSFN W +I + I+S + +L L G ++ KF
Sbjct: 80 IRWSEGGKEVFISGSFNNWSTKIPL-----------IKSHND--FVAILDLPEGEHQYKF 126
Query: 503 IVDGQWKVDPQRESVT-KGGICNNILRV 529
VDGQW DP VT + G NN++ V
Sbjct: 127 FVDGQWVHDPSEPVVTSQLGTINNLIHV 154
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 22/121 (18%)
Query: 417 AEKLISDKDEELIAAEESL-------SGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDP 469
+E++ + + EE +A + L + +++G G+ V ++GSFN W P
Sbjct: 49 SEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKL----P 104
Query: 470 LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGICNNILR 528
L +R + +L L G ++ KF VDGQW DP VT + G NNI++
Sbjct: 105 L----------TRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQ 154
Query: 529 V 529
V
Sbjct: 155 V 155
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 22/121 (18%)
Query: 417 AEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHRIKMDP 469
+E++ + + EE +A + L + Q ++G G+ V ++GSFN W P
Sbjct: 49 SEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKL----P 104
Query: 470 LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGICNNILR 528
L +R + +L L G ++ KF VDGQW DP VT + G NN+++
Sbjct: 105 L----------TRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPVVTSQLGTVNNVIQ 154
Query: 529 V 529
V
Sbjct: 155 V 155
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 22/121 (18%)
Query: 417 AEKLISDKDEELIAAEESLSGLEVVEIQ-------YSGDGEIVEVAGSFNGWHHRIKMDP 469
+E++ + + EE +A + L + Q ++G G+ V ++GSFN W P
Sbjct: 49 SEEIKAPEKEEFLAWQRDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKL----P 104
Query: 470 LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT-KGGICNNILR 528
L +R + +L L G ++ KF VDGQW DP VT + G NNI++
Sbjct: 105 L----------TRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQ 154
Query: 529 V 529
V
Sbjct: 155 V 155
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 15/88 (17%)
Query: 443 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKF 502
+++G G+ V ++GSFN W S + RS + + +L L G ++ KF
Sbjct: 47 FRWTGGGKEVYLSGSFNNW------------SKLPLTRSHNNFV--AILDLPEGEHQYKF 92
Query: 503 IVDGQWKVDPQRESVT-KGGICNNILRV 529
+VDGQW DP VT + G NNI++V
Sbjct: 93 LVDGQWTHDPSEPVVTSQLGTVNNIIQV 120
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 449 GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 508
G V ++GSF W + M PL + + + L PG ++ KF VDG+W
Sbjct: 31 GRRVFLSGSFTRWTEHVPMSPLEGCPTV----------FQVICNLTPGYHQYKFFVDGEW 80
Query: 509 KVDPQRESVT-KGGICNNIL 527
+ D + V+ GG+ N I
Sbjct: 81 RHDEHQPFVSGNGGVVNTIF 100
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 441 VEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEI 500
V+I + G V V GSF GW I + P+P + L L L PGT+
Sbjct: 164 VDITWQQGGNKVYVTGSFTGWRKMIGLVPVPG----------QPGLMHVKLQLPPGTHRF 213
Query: 501 KFIVDGQWK 509
+FIVD + +
Sbjct: 214 RFIVDNELR 222
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 443 IQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-GTYEIK 501
I + G+ + V GS++ W R ++ RS K T++ + P G YE +
Sbjct: 106 ITWCHGGKEIAVEGSWDNWKTRSRLQ-----------RSGKD---FTIMKVLPSGVYEYR 151
Query: 502 FIVDGQWKVDPQ 513
FIVDGQW+ P+
Sbjct: 152 FIVDGQWRHAPE 163
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 441 VEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEI 500
VEI++ G V V GSF W I + P S + + L L PGT+
Sbjct: 166 VEIRWQQGGSKVYVTGSFTKWRKMIGLIP----------DSDNNGSFHVKLRLLPGTHRF 215
Query: 501 KFIVDGQWKV 510
+FIVD + +V
Sbjct: 216 RFIVDNELRV 225
>sp|Q7SFQ9|MRS2_NEUCR Mitochondrial inner membrane magnesium transporter mrs2
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=mrs2 PE=3 SV=1
Length = 547
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 389 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVEIQ---Y 445
LS L++ I++EKL + ++ +K V+ + KL+ D EEL+ A++ L+ + + E Y
Sbjct: 317 LSELEDDIDREKLRVLLVLSKRVSTFEQKAKLVRDAIEELLEADDDLASMYLTEKTHDLY 376
Query: 446 SGDGEIVEV 454
G+ + E+
Sbjct: 377 RGEDDHTEI 385
>sp|Q4I298|MRS2_GIBZE Mitochondrial inner membrane magnesium transporter MRS2
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=MRS2 PE=3 SV=1
Length = 498
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 389 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVEIQ---Y 445
LS L++ I++ KL + ++ +K V+ + KL+ D E+L+ A++ L+ + + E Y
Sbjct: 268 LSELEDDIDRHKLRMLLILSKRVSTFEQKAKLVRDAIEDLLEADDDLADMYLTEKTHDLY 327
Query: 446 SGDGEIVEVAGSFNGWH 462
G+ + EV +H
Sbjct: 328 RGEDDHTEVEMLLESYH 344
>sp|Q6C8H7|LPE10_YARLI Mitochondrial inner membrane magnesium transporter LPE10
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=LPE10 PE=3 SV=1
Length = 455
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 389 LSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGLEVVE 442
LS L++ I++EKL ++Q+K ++ + LI D +EL+ +E L+GL + E
Sbjct: 247 LSELEQDIDREKLRHLLIQSKKLSAFLQKATLIRDVIDELLDTDEDLAGLYLTE 300
>sp|P11048|LMNA_XENLA Lamin-A OS=Xenopus laevis GN=lmna PE=2 SV=1
Length = 665
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 370 ENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELI 429
E Q EI + + +LS+L++Q+ + L L+ E + + +L++DKD E+
Sbjct: 283 EAQEEIQQSRIRIDSLSAQLSQLQKQLAAREAKLRDLEDAYARERDSSRRLLADKDREMA 342
Query: 430 AAEESLSG-----LEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSS 473
+ E+++I+ + D EI G R+++ P P++
Sbjct: 343 EMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPNT 391
>sp|Q6EIZ1|K22E_CANFA Keratin, type II cytoskeletal 2 epidermal OS=Canis familiaris
GN=KRT2 PE=2 SV=1
Length = 633
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 369 RENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEEL 428
+E ++EI L M+ + + E++ +K+Q + + A++ + K + A+ +SD +E L
Sbjct: 402 KEVKMEISELNRMIQRLQGEIAHVKKQCKSVQEAIAEAEQKGEHAVKDAQGKLSDLEEAL 461
Query: 429 IAAEESLSGL-----EVVEIQYSGDGEIVEVAGSFNGWHHRIKMD 468
A E L+GL E++ ++ + D EI G R+ D
Sbjct: 462 QQAREDLAGLLRDYQELMNVKLALDVEIATYRKLLEGEECRMSGD 506
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,095,725
Number of Sequences: 539616
Number of extensions: 7532337
Number of successful extensions: 48125
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 338
Number of HSP's that attempted gapping in prelim test: 42094
Number of HSP's gapped (non-prelim): 3700
length of query: 530
length of database: 191,569,459
effective HSP length: 122
effective length of query: 408
effective length of database: 125,736,307
effective search space: 51300413256
effective search space used: 51300413256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)