Query 009634
Match_columns 530
No_of_seqs 307 out of 2042
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 09:35:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 3.8E-85 1.3E-89 698.7 42.0 477 47-530 1-478 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.4E-70 4.9E-75 569.8 37.0 367 46-530 1-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 6.7E-70 2.3E-74 566.2 36.1 374 44-530 6-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 4.7E-64 1.6E-68 518.0 36.6 332 91-530 11-342 (351)
5 3k1w_A Renin; protease, altern 100.0 5.7E-64 1.9E-68 515.5 35.5 332 91-530 6-340 (341)
6 1dpj_A Proteinase A; proteinas 100.0 1.6E-63 5.4E-68 509.7 37.8 326 93-530 3-329 (329)
7 3cms_A Chymosin B; hydrolase, 100.0 1.2E-63 4.3E-68 509.1 36.8 321 92-530 3-323 (323)
8 4aa9_A Chymosin; hydrolase, as 100.0 1.3E-63 4.3E-68 508.5 34.2 319 94-530 2-320 (320)
9 1am5_A Pepsin, acid proteinase 100.0 2.7E-63 9.1E-68 507.0 34.5 322 94-530 3-324 (324)
10 1htr_B Gastricsin; aspartyl pr 100.0 2.3E-63 7.8E-68 508.5 33.9 325 94-530 4-329 (329)
11 1miq_A Plasmepsin; aspartic pr 100.0 1.3E-62 4.3E-67 511.1 35.3 321 91-530 50-374 (375)
12 3qvc_A Histo-aspartic protease 100.0 1.9E-62 6.5E-67 519.2 36.5 322 90-530 124-449 (451)
13 2bju_A Plasmepsin II; aspartic 100.0 4.5E-62 1.5E-66 515.7 34.4 322 91-530 126-450 (453)
14 1yg9_A Aspartic protease BLA G 100.0 5.3E-61 1.8E-65 491.0 32.3 318 92-530 6-329 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 5.5E-61 1.9E-65 497.1 32.5 326 91-530 6-355 (361)
16 2apr_A Rhizopuspepsin; hydrola 100.0 1E-58 3.5E-63 473.2 38.5 311 99-530 11-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 1.3E-58 4.6E-63 473.1 36.4 313 99-529 11-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.8E-58 6.2E-63 472.1 34.9 310 101-529 13-329 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 1.6E-57 5.6E-62 467.0 35.8 314 92-530 2-329 (339)
20 1ibq_A Aspergillopepsin; aspar 100.0 3.5E-57 1.2E-61 461.9 36.2 309 101-530 12-325 (325)
21 2qzx_A Candidapepsin-5; aspart 100.0 3.2E-57 1.1E-61 465.4 35.8 315 92-530 2-331 (342)
22 1j71_A Candidapepsin, aspartic 100.0 2.7E-57 9.2E-62 464.5 34.2 309 93-530 3-324 (334)
23 1izd_A Aspartic proteinase; su 100.0 4.1E-57 1.4E-61 460.9 34.9 311 94-530 8-323 (323)
24 3pvk_A Candidapepsin-2; hydrol 100.0 9.2E-57 3.2E-61 462.0 34.5 315 93-530 3-331 (342)
25 1bxo_A Protein (penicillopepsi 100.0 3.6E-57 1.2E-61 461.4 30.3 311 94-530 8-323 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 6.5E-56 2.2E-60 455.3 34.9 312 93-530 3-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 1.2E-55 4.2E-60 470.4 28.8 325 96-530 67-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 2.7E-54 9.3E-59 450.4 31.9 322 96-530 6-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 7.2E-54 2.5E-58 450.0 30.2 323 97-530 22-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 1.2E-53 4E-58 447.4 31.5 323 96-530 14-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 5.2E-53 1.8E-57 443.4 28.0 325 92-530 9-387 (403)
32 3vla_A EDGP; extracellular, in 100.0 2.7E-52 9.1E-57 438.2 23.6 335 91-529 7-398 (413)
33 1t6e_X Xylanase inhibitor; two 100.0 2.7E-49 9.1E-54 412.2 20.6 324 94-530 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 3.7E-48 1.3E-52 377.9 26.5 238 92-333 2-239 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.8E-44 6.1E-49 352.4 27.5 241 184-530 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2.4E-23 8.3E-28 172.7 10.4 93 93-185 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 8.2E-21 2.8E-25 154.7 9.2 87 443-530 1-87 (87)
38 3rfi_A Asp; PSI, saposin, hydr 99.5 2.4E-15 8.2E-20 126.8 4.0 106 332-439 3-108 (108)
39 3bqp_A Proactivator polypeptid 96.8 0.0007 2.4E-08 52.9 2.9 47 401-450 2-48 (80)
40 2qyp_A Proactivator polypeptid 96.6 0.00073 2.5E-08 54.4 2.1 42 400-441 4-45 (91)
41 4ddj_A Saposin-A, protein A; s 96.6 0.0011 3.7E-08 52.3 3.0 41 401-441 3-43 (83)
42 1of9_A Pore-forming peptide am 96.2 0.0023 7.9E-08 49.7 2.9 40 401-441 2-41 (77)
43 1l9l_A Granulysin; saposin fol 96.0 0.0037 1.3E-07 48.1 2.8 38 402-440 2-39 (74)
44 2gtg_A Proactivator polypeptid 95.9 0.0043 1.5E-07 48.8 3.1 41 400-440 3-43 (83)
45 1n69_A Saposin B; lipid bindin 95.7 0.0051 1.8E-07 48.2 2.7 41 400-440 2-43 (81)
46 1nkl_A NK-lysin; saposin fold, 95.7 0.0039 1.3E-07 48.5 2.0 39 402-440 2-40 (78)
47 2js9_A Saposin-like protein fa 94.0 0.013 4.5E-07 47.7 0.9 51 399-451 19-69 (99)
48 2qyp_A Proactivator polypeptid 93.0 0.089 3E-06 41.9 4.2 40 336-375 46-85 (91)
49 2i1a_A DNA damage-inducible pr 92.5 0.18 6.2E-06 43.9 5.9 96 96-216 18-115 (148)
50 1nkl_A NK-lysin; saposin fold, 92.1 0.056 1.9E-06 41.8 1.8 37 336-372 41-77 (78)
51 1of9_A Pore-forming peptide am 91.5 0.056 1.9E-06 41.7 1.2 36 336-371 42-77 (77)
52 2js9_A Saposin-like protein fa 90.9 0.063 2.1E-06 43.6 1.0 37 336-372 63-99 (99)
53 3bqp_A Proactivator polypeptid 90.8 0.084 2.9E-06 40.7 1.6 37 336-372 43-79 (80)
54 2gtg_A Proactivator polypeptid 90.5 0.1 3.5E-06 40.7 1.8 37 336-372 45-81 (83)
55 1l9l_A Granulysin; saposin fol 89.6 0.16 5.3E-06 38.9 2.1 34 336-369 41-74 (74)
56 2i1a_A DNA damage-inducible pr 88.2 1.5 5.1E-05 37.9 7.9 26 502-527 109-134 (148)
57 3s8i_A Protein DDI1 homolog 1; 87.2 1.2 4E-05 38.9 6.5 26 502-527 108-133 (148)
58 4ddj_A Saposin-A, protein A; s 86.7 0.25 8.7E-06 38.4 1.8 36 337-372 46-82 (83)
59 1n69_A Saposin B; lipid bindin 85.5 0.3 1E-05 37.9 1.6 36 336-372 45-80 (81)
60 3s8i_A Protein DDI1 homolog 1; 84.7 1.4 4.7E-05 38.4 5.7 91 102-216 22-114 (148)
61 3vcm_P Prorenin; aspartic prot 74.1 3 0.0001 27.9 3.4 24 45-68 7-30 (43)
62 2hs1_A HIV-1 protease; ultra-h 73.8 4 0.00014 32.8 4.6 29 106-136 10-38 (99)
63 1fmb_A EIAV protease; hydrolas 73.1 3.5 0.00012 33.5 4.2 26 105-132 9-34 (104)
64 3ec0_A Protease; HIV-2, inhibi 67.5 7 0.00024 31.4 4.7 29 106-136 10-38 (99)
65 3liy_A Protease; hydrolase, hy 65.5 5.2 0.00018 32.9 3.6 31 106-136 12-45 (116)
66 3s64_A AC-SLP-1, saposin-like 64.9 2.4 8.3E-05 33.2 1.5 51 321-371 36-87 (87)
67 2hah_A Protease, retropepsin; 57.9 9.4 0.00032 31.6 3.9 26 106-134 16-41 (116)
68 3sqf_A Protease; folded monome 50.9 16 0.00055 30.0 4.2 29 106-136 11-39 (114)
69 3slz_A GAG-Pro-POL polyprotein 44.8 26 0.00088 29.6 4.7 30 104-135 22-51 (132)
70 1htr_P Progastricsin (Pro segm 37.7 18 0.0006 23.4 2.1 22 46-67 2-23 (43)
71 1tzs_P Activation peptide from 37.1 16 0.00055 22.3 1.7 22 45-66 2-23 (35)
72 3ka2_A [L-Ala51;Gly51']HIV-1 p 36.4 30 0.001 31.5 4.0 29 104-134 8-36 (203)
73 1ibq_A Aspergillopepsin; aspar 35.4 41 0.0014 32.6 5.3 42 271-322 3-44 (325)
74 1bxo_A Protein (penicillopepsi 35.1 42 0.0014 32.6 5.3 43 270-322 3-45 (323)
75 2rsp_A RSV protease; hydrolase 34.5 36 0.0012 28.4 3.9 21 116-136 30-50 (124)
76 1lya_A Cathepsin D; lysosomal 33.0 33 0.0011 27.0 3.4 33 281-321 12-44 (97)
77 1izd_A Aspartic proteinase; su 32.0 50 0.0017 32.0 5.3 42 271-322 4-45 (323)
78 1oew_A Endothiapepsin; hydrola 24.1 82 0.0028 30.5 5.2 43 271-321 3-46 (329)
79 1mpp_A Pepsin; hydrolase(acid 23.0 79 0.0027 31.0 4.9 44 270-321 4-49 (361)
80 3c9x_A Trichoderma reesei aspa 22.0 96 0.0033 30.0 5.2 43 271-321 3-46 (329)
81 1b5f_A Protein (cardosin A); h 21.1 82 0.0028 28.9 4.3 38 94-133 181-226 (239)
82 2apr_A Rhizopuspepsin; hydrola 20.6 1.1E+02 0.0036 29.6 5.2 42 272-321 5-46 (325)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.8e-85 Score=698.70 Aligned_cols=477 Identities=70% Similarity=1.237 Sum_probs=400.1
Q ss_pred EEEeeeeecchhhhhhccCcccchhh-hcccccccccCCCCCCCCCcceEecccccCceEEEEEEEcCCCceEEEEEcCC
Q 009634 47 VRIGLRKKKLDQINRLVGQTVSKEEE-TMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTG 125 (530)
Q Consensus 47 ~~ipl~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTG 125 (530)
+||||+|+++.++.+.+++.....++ +++ ++... ...++...+||.|+.+.+|+++|+||||||+|.|+||||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTG 74 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLS----GANPL--RSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTG 74 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETT
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHHHh----hcccc--cCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCC
Confidence 48999999999888877654422222 221 11100 011235679999999999999999999999999999999
Q ss_pred CCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEEEEEEEEEEEECCeEecceeEEEEEeccccccc
Q 009634 126 SSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFL 205 (530)
Q Consensus 126 Ss~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~ 205 (530)
|+++||+|..|..+..|..++.|+|++|+||+..++.+.+.|++|++.|.+++|+|++++..++++.||++....+..|.
T Consensus 75 Ss~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~ 154 (478)
T 1qdm_A 75 SSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFL 154 (478)
T ss_dssp CCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHH
T ss_pred CcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccc
Confidence 99999999999645689999999999999999999999999999999999999999999999999999999987665566
Q ss_pred ccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCCCCCCeEEEECcccCCCcccceEEEeccCCCceE
Q 009634 206 AAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQ 285 (530)
Q Consensus 206 ~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~ 285 (530)
...++||||||++..+.....|++++|++||+|++++||+||++..+....|+|+|||+|+++|.|++.|+|+...++|.
T Consensus 155 ~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~ 234 (478)
T 1qdm_A 155 VAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQ 234 (478)
T ss_dssp HCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEE
T ss_pred cccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEE
Confidence 67889999999999887777889999999999999999999988643345899999999999999999999999889999
Q ss_pred EEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCccccc
Q 009634 286 FEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKIC 365 (530)
Q Consensus 286 v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~ 365 (530)
|.+++|.|+++.+.++.....++|||||+++++|.+++++|.+++++.+.....|+.++..||+.+++.++++.+|..+|
T Consensus 235 v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC 314 (478)
T 1qdm_A 235 FDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKIC 314 (478)
T ss_dssp EEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHH
T ss_pred EEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhh
Confidence 99999999999877666788999999999999999999999999999988889999999999999999999999999999
Q ss_pred ccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCe
Q 009634 366 SQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGES 445 (530)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~ 445 (530)
.++++|..+++++++.++++|++++.++++ +..++.+|.+|+|++.|++++|+.|.|+++|+++++++|+.++...|.|
T Consensus 315 ~~iglC~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~ 393 (478)
T 1qdm_A 315 SQVGLCTFDGTRGVSAGIRSVVDDEPVKSN-GLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGES 393 (478)
T ss_dssp HHTTCC----------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCC
T ss_pred ccccccccCccccccccccccccccccccc-cccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeE
Confidence 999999999999999999999888654443 3467899999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEE
Q 009634 446 AVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIG 525 (530)
Q Consensus 446 ~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIG 525 (530)
.++|+.+..+|+|+|+|+|++|+|+|++|+++..++....|+++|++++++++.++.||||++|||++|+|||++++|||
T Consensus 394 ~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIG 473 (478)
T 1qdm_A 394 AVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIG 473 (478)
T ss_dssp EECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EeecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEE
Confidence 99999888999999999999999999999998765545689999998887666678999999999999999999999999
Q ss_pred EEEcC
Q 009634 526 FAEAA 530 (530)
Q Consensus 526 fA~a~ 530 (530)
||+++
T Consensus 474 fA~a~ 478 (478)
T 1qdm_A 474 FAKAA 478 (478)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 99986
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.4e-70 Score=569.79 Aligned_cols=367 Identities=41% Similarity=0.773 Sum_probs=321.4
Q ss_pred eEEEeeeeecchhhhhhccCcccchhhhcccccccccCCCCCC-C--CCcceEecccccCceEEEEEEEcCCCceEEEEE
Q 009634 46 LVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLG-D--SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 122 (530)
Q Consensus 46 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~--~~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~l 122 (530)
++||||+|.++.|+.+.+++..++ +++ .|+++++.... . .....+||.|+.|.+|+++|+||||||+|+|++
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKD---FLK--THKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH---HHH--HCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHH---HHh--hhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 479999999999999888776554 443 23333322111 1 135678999999999999999999999999999
Q ss_pred cCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEEEEEEEEEEEECCeEecceeEEEEEecccc
Q 009634 123 DTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI 202 (530)
Q Consensus 123 DTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~ 202 (530)
||||+++||+|..|. +..|..++.|+|++|+||+..++.+.+.|++|++.|.+++|+|++++..++++.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 6689999999999999999999999999999999999999999999999999999999987766
Q ss_pred cccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCCCCCCeEEEECcccCCCcccceEEEeccCCC
Q 009634 203 TFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG 282 (530)
Q Consensus 203 ~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~ 282 (530)
.|....++||||||++..+.....|++++|++||+|++++||+||++.. ...|+|+|||+|+++|.|++.|+|+.+++
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6777789999999999998888889999999999999999999999862 24899999999999999999999999999
Q ss_pred ceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcc
Q 009634 283 YWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQ 362 (530)
Q Consensus 283 ~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~ 362 (530)
+|+|.+++|+|+++.+. +...+.++|||||+++++|.+++++|.+++++..
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~---------------------------- 283 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE---------------------------- 283 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE----------------------------
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc----------------------------
Confidence 99999999999998775 5678899999999999999999999999987650
Q ss_pred cccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCC
Q 009634 363 KICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPN 442 (530)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~ 442 (530)
...
T Consensus 284 -----------------------------------------------------------------------------~~~ 286 (370)
T 3psg_A 284 -----------------------------------------------------------------------------NSD 286 (370)
T ss_dssp -----------------------------------------------------------------------------CTT
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 125
Q ss_pred CCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCC
Q 009634 443 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 522 (530)
Q Consensus 443 ~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~ 522 (530)
|.|.++|+....+|+|+|+|+|.+++|++++|+++ .+ +.|+++|+..+.++..++.||||++|||++|+|||++++
T Consensus 287 g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~~---~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~ 362 (370)
T 3psg_A 287 GEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-DD---DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANN 362 (370)
T ss_dssp CCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-CS---SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCcccCCcEEEEECCEEEEECHHHhccc-CC---CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCC
Confidence 67999999888899999999999999999999998 22 469999998876554566899999999999999999999
Q ss_pred eEEEEEcC
Q 009634 523 SIGFAEAA 530 (530)
Q Consensus 523 rIGfA~a~ 530 (530)
|||||+|+
T Consensus 363 riGfA~a~ 370 (370)
T 3psg_A 363 KVGLAPVA 370 (370)
T ss_dssp EEEEEEBC
T ss_pred EEEEEEcC
Confidence 99999996
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=6.7e-70 Score=566.18 Aligned_cols=374 Identities=40% Similarity=0.728 Sum_probs=299.3
Q ss_pred CceEEEeeeeecchhhhhhccCc-ccchhhhcccccccccCCCCCCCCCcceEecccccCceEEEEEEEcCCCceEEEEE
Q 009634 44 DGLVRIGLRKKKLDQINRLVGQT-VSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 122 (530)
Q Consensus 44 ~~~~~ipl~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~l 122 (530)
+.++||||+|+++.|+.+.+.+. ..+ +++.....++..... .....+||.|+.+.+|+++|+||||||+|.|+|
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMAR---LGPEWSQPMKRLTLG--NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHH---HHHhhcccccccccc--CCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 34789999999888887766554 222 222110011110000 134569999999999999999999999999999
Q ss_pred cCCCCCceeeCCCCCC-CcCcCCCCccCCCCCCCceeCCcEEEEEecCceEEEEEEEEEEEECCeEecceeEEEEEeccc
Q 009634 123 DTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEAS 201 (530)
Q Consensus 123 DTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~ 201 (530)
||||+++||+|..|.. ...|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++++..++ +.||++....+
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999962 358999999999999999999999999999999999999999999999999 99999998776
Q ss_pred ccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCCCC--CCeEEEECcccCCCcccceEEEecc
Q 009634 202 ITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGE--EGGEIVFGGVDPDHYKGEHTYVPVT 279 (530)
Q Consensus 202 ~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~--~~G~L~fGg~D~~~~~g~l~~~p~~ 279 (530)
..|....++||||||++..+.....|++++|++||+|++++||+||++..... ..|+|+|||+|+++|.|++.|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 66667788999999999988878889999999999999999999998864321 3799999999999999999999999
Q ss_pred CCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhcc
Q 009634 280 KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAET 359 (530)
Q Consensus 280 ~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~ 359 (530)
++++|+|.+++|.|+++.+. +..++.+|+||||+++++|.+++++|.+++++.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------- 292 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------- 292 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------
Confidence 99999999999999998753 567889999999999999999999999998764
Q ss_pred CcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCC
Q 009634 360 QPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLP 439 (530)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~ 439 (530)
+
T Consensus 293 -------------------------------------------------------------------------------~ 293 (383)
T 2x0b_A 293 -------------------------------------------------------------------------------K 293 (383)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeC
Q 009634 440 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDY 519 (530)
Q Consensus 440 ~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~ 519 (530)
..|.|.++|+....+|+|+|+|+|++++|+|++|+++..+.+...|+++|++.+.+++.++.||||++|||++|+|||+
T Consensus 294 -~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~ 372 (383)
T 2x0b_A 294 -RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDR 372 (383)
T ss_dssp -CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEET
T ss_pred -cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEEC
Confidence 2466889999888999999999999999999999998664445689999998876655667999999999999999999
Q ss_pred CCCeEEEEEcC
Q 009634 520 GNLSIGFAEAA 530 (530)
Q Consensus 520 ~~~rIGfA~a~ 530 (530)
+++|||||+++
T Consensus 373 ~~~rIGfA~a~ 383 (383)
T 2x0b_A 373 RNNRIGFALAR 383 (383)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCEEeEEEcC
Confidence 99999999986
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.7e-64 Score=518.05 Aligned_cols=332 Identities=48% Similarity=0.884 Sum_probs=293.2
Q ss_pred CcceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCc
Q 009634 91 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 170 (530)
Q Consensus 91 ~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~G 170 (530)
+...+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34458999999999999999999999999999999999999999996 46899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCC
Q 009634 171 AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRD 250 (530)
Q Consensus 171 s~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~ 250 (530)
++.|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|++||.|++++||+||++.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 99999999999999999999999999877665566678899999999988877788899999999999999999999887
Q ss_pred CCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHh
Q 009634 251 IEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAI 330 (530)
Q Consensus 251 ~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i 330 (530)
......|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +.....++|||||+++++|.+++++|.+++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 4333479999999999999999999999988999999999999998764 456789999999999999999999999998
Q ss_pred ccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHH
Q 009634 331 GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMA 410 (530)
Q Consensus 331 ~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (530)
++..
T Consensus 249 ~~~~---------------------------------------------------------------------------- 252 (351)
T 1tzs_A 249 GAAP---------------------------------------------------------------------------- 252 (351)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 6540
Q ss_pred HHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeE
Q 009634 411 VIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGF 490 (530)
Q Consensus 411 ~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~ 490 (530)
.. +.|.++|+....+|+|+|+|+|++++|+|++|+++....+...|+++|
T Consensus 253 -----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~ 302 (351)
T 1tzs_A 253 -----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGF 302 (351)
T ss_dssp -----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESE
T ss_pred -----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEE
Confidence 11 568899998778999999999999999999999986543346899999
Q ss_pred EecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 491 TAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 491 ~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+..+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 303 ~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 303 QGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp EECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred EECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 8876544456789999999999999999999999999985
No 5
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=5.7e-64 Score=515.50 Aligned_cols=332 Identities=43% Similarity=0.836 Sum_probs=298.0
Q ss_pred CcceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCC-CcCcCCCCccCCCCCCCceeCCcEEEEEecC
Q 009634 91 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGT 169 (530)
Q Consensus 91 ~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 169 (530)
+...+||.|+.|.+|+++|+||||||+++|++||||+++||+|..|.. ...|..++.|+|++|+||+..++.+.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 567899999999999999999999999999999999999999999963 3479889999999999999999999999999
Q ss_pred ceEEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecC
Q 009634 170 GAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNR 249 (530)
Q Consensus 170 Gs~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~ 249 (530)
|++.|.+++|+|++++..+ ++.||++....+..|....++||||||++..+.....|++++|++||.|++++||+||++
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998776556667789999999999887778899999999999999999999998
Q ss_pred CC--CCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHH
Q 009634 250 DI--EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQIN 327 (530)
Q Consensus 250 ~~--~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~ 327 (530)
.. .....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.++++.+. +.....++|||||+++++|++++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223489999999999999999999999999999999999999998753 456789999999999999999999999
Q ss_pred HHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhh
Q 009634 328 HAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSAC 407 (530)
Q Consensus 328 ~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (530)
+++++..
T Consensus 244 ~~~~~~~------------------------------------------------------------------------- 250 (341)
T 3k1w_A 244 EALGAKK------------------------------------------------------------------------- 250 (341)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHcCCee-------------------------------------------------------------------------
Confidence 9987650
Q ss_pred HHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEE
Q 009634 408 EMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCI 487 (530)
Q Consensus 408 ~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~ 487 (530)
...| |.++|+....+|+|+|+|+|++++|+|++|+++........|+
T Consensus 251 --------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~ 297 (341)
T 3k1w_A 251 --------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCT 297 (341)
T ss_dssp --------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEE
T ss_pred --------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEE
Confidence 1235 8999998778999999999999999999999986554467899
Q ss_pred eeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 488 SGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 488 ~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
++|...+.++..++.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 298 LAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp BSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999877655556789999999999999999999999999986
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.6e-63 Score=509.72 Aligned_cols=326 Identities=44% Similarity=0.850 Sum_probs=292.8
Q ss_pred ceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceE
Q 009634 93 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 172 (530)
Q Consensus 93 ~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~ 172 (530)
..+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 468999999999999999999999999999999999999999996 4469889999999999999999999999999999
Q ss_pred EEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCC
Q 009634 173 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE 252 (530)
Q Consensus 173 ~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~ 252 (530)
.|.+++|+|++++.+++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998765445566789999999998887777889999999999999999999987531
Q ss_pred -CCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhc
Q 009634 253 -GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 331 (530)
Q Consensus 253 -~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~ 331 (530)
....|+|+|||+|+++|.|++.|+|+.++++|.|.+++|+|+++.+. .....++|||||+++++|++++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999999999999999999998874 356799999999999999999999999986
Q ss_pred cCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHH
Q 009634 332 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 411 (530)
Q Consensus 332 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (530)
+.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (329)
T 1dpj_A 240 AK------------------------------------------------------------------------------ 241 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 53
Q ss_pred HHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEE
Q 009634 412 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFT 491 (530)
Q Consensus 412 ~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~ 491 (530)
....+.|.++|+....+|+|+|+|+|.+++|+|++|+++.+ ..|+++|+
T Consensus 242 ---------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~ 290 (329)
T 1dpj_A 242 ---------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAIT 290 (329)
T ss_dssp ---------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEE
T ss_pred ---------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEE
Confidence 01246788999987789999999999999999999999854 48999998
Q ss_pred ecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 492 AFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 492 ~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
..+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 291 PMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp ECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 876544456799999999999999999999999999986
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.2e-63 Score=509.14 Aligned_cols=321 Identities=42% Similarity=0.784 Sum_probs=289.6
Q ss_pred cceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCce
Q 009634 92 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 171 (530)
Q Consensus 92 ~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs 171 (530)
...+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568998999999999999999999999999999
Q ss_pred EEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCC
Q 009634 172 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 251 (530)
Q Consensus 172 ~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 251 (530)
+.|.+++|+|++++.+++++.||++....+..|....++||||||++..+.....+++++|++||.|.+++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876645556678999999999988878889999999999999999999998863
Q ss_pred CCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhc
Q 009634 252 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 331 (530)
Q Consensus 252 ~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~ 331 (530)
. .|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +.....++|||||+++++|.+++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 39999999999999999999999999999999999999998875 3467899999999999999999999999986
Q ss_pred cCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHH
Q 009634 332 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 411 (530)
Q Consensus 332 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (530)
+..
T Consensus 238 ~~~----------------------------------------------------------------------------- 240 (323)
T 3cms_A 238 ATQ----------------------------------------------------------------------------- 240 (323)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 540
Q ss_pred HHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEE
Q 009634 412 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFT 491 (530)
Q Consensus 412 ~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~ 491 (530)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++ ....|+.+|+
T Consensus 241 ----------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~ 288 (323)
T 3cms_A 241 ----------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQ 288 (323)
T ss_dssp ----------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEE
T ss_pred ----------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEE
Confidence 12456889999888899999999999999999999998 2358999888
Q ss_pred ecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 492 AFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 492 ~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
..+ .++.||||++|||++|+|||++++|||||+++
T Consensus 289 ~~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 289 SEN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EC-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eCC----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 653 34689999999999999999999999999986
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.3e-63 Score=508.53 Aligned_cols=319 Identities=43% Similarity=0.799 Sum_probs=285.1
Q ss_pred eEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEE
Q 009634 94 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 173 (530)
Q Consensus 94 ~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~ 173 (530)
.+||.|+.|.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47999999999999999999999999999999999999999996 56898899999999999999999999999999999
Q ss_pred EEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCCC
Q 009634 174 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 253 (530)
Q Consensus 174 G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 253 (530)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765566677899999999998887788999999999999999999999985
Q ss_pred CCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccC
Q 009634 254 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 333 (530)
Q Consensus 254 ~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~ 333 (530)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.++++.+. +.....++|||||+++++|++++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 346789999999999999999999999998654
Q ss_pred cccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHH
Q 009634 334 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 413 (530)
Q Consensus 334 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (530)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (320)
T 4aa9_A 237 E------------------------------------------------------------------------------- 237 (320)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEec
Q 009634 414 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAF 493 (530)
Q Consensus 414 ~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~ 493 (530)
...+.|.++|+....+|+|+|+|+|++++|+|++|+.+ ....|+++|+..
T Consensus 238 --------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~ 287 (320)
T 4aa9_A 238 --------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGD 287 (320)
T ss_dssp --------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEE
T ss_pred --------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcC
Confidence 12467899999877899999999999999999999976 235899988752
Q ss_pred ccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 494 DVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 494 ~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
..++.||||++|||++|+|||++++|||||+||
T Consensus 288 ----~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 288 ----NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ----TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ----CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 244689999999999999999999999999986
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-63 Score=506.96 Aligned_cols=322 Identities=41% Similarity=0.758 Sum_probs=291.0
Q ss_pred eEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEE
Q 009634 94 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 173 (530)
Q Consensus 94 ~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~ 173 (530)
.+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 45798899999999999999999999999999999
Q ss_pred EEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCCC
Q 009634 174 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 253 (530)
Q Consensus 174 G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 253 (530)
|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|++||.|++++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998766556567789999999998887778889999999999999999999988632
Q ss_pred CCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccC
Q 009634 254 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 333 (530)
Q Consensus 254 ~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~ 333 (530)
..|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +++ ..++|||||+++++|++++++|.+++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 389999999999999999999999988999999999999998764 334 89999999999999999999999988532
Q ss_pred cccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHH
Q 009634 334 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 413 (530)
Q Consensus 334 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (530)
T Consensus 238 -------------------------------------------------------------------------------- 237 (324)
T 1am5_A 238 -------------------------------------------------------------------------------- 237 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEec
Q 009634 414 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAF 493 (530)
Q Consensus 414 ~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~ 493 (530)
...|.|.++|+....+|+|+|+|+|.+++|+|++|+++. ...|+++|+..
T Consensus 238 --------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~ 287 (324)
T 1am5_A 238 --------------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSS 287 (324)
T ss_dssp --------------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEEC
T ss_pred --------------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEEC
Confidence 013568899998888999999999999999999999985 35899999887
Q ss_pred ccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 494 DVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 494 ~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 288 ~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 288 GVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 6544456799999999999999999999999999986
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.3e-63 Score=508.53 Aligned_cols=325 Identities=43% Similarity=0.839 Sum_probs=291.9
Q ss_pred eEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEE
Q 009634 94 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 173 (530)
Q Consensus 94 ~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~ 173 (530)
.+||+ +.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999996 45798899999999999999999999999999999
Q ss_pred EEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCCC
Q 009634 174 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 253 (530)
Q Consensus 174 G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 253 (530)
|.+++|+|++++.+++++.||++....+..|....++||||||++..+.....+++++|++||.|++++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~- 160 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG- 160 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC-
Confidence 9999999999999999999999987766556667889999999999887778889999999999999999999988642
Q ss_pred CCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccC
Q 009634 254 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 333 (530)
Q Consensus 254 ~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~ 333 (530)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+..+.....++|||||+++++|++++++|.+++++.
T Consensus 161 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 161 SSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp SEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred CCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 23799999999999999999999999999999999999999987643456789999999999999999999999998654
Q ss_pred cccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHH
Q 009634 334 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 413 (530)
Q Consensus 334 ~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (530)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEec
Q 009634 414 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAF 493 (530)
Q Consensus 414 ~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~ 493 (530)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++.. +.|+++|+..
T Consensus 242 --------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~ 291 (329)
T 1htr_B 242 --------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPT 291 (329)
T ss_dssp --------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEE
T ss_pred --------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEEC
Confidence 1245688999977789999999999999999999999864 3899999877
Q ss_pred ccCCCCCC-eeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 494 DVAPPRGP-LWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 494 ~~~~~~~~-~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+.+.+.++ .||||++|||++|+|||++++|||||+++
T Consensus 292 ~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 292 YLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 65444456 89999999999999999999999999986
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.3e-62 Score=511.06 Aligned_cols=321 Identities=35% Similarity=0.676 Sum_probs=288.4
Q ss_pred CcceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCc
Q 009634 91 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 170 (530)
Q Consensus 91 ~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~G 170 (530)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 44568999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCeEecceeEEEEEe----cccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEE
Q 009634 171 AISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 246 (530)
Q Consensus 171 s~~G~~~~Dtv~lg~~~~~~~~fg~~~~----~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~ 246 (530)
++.|.+++|+|++|+..+++ .||++.. .. .|....++||||||++..+.....+++++|++||.|++++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999998 43 45556789999999999888788899999999999999999999
Q ss_pred ecCCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHH
Q 009634 247 LNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 326 (530)
Q Consensus 247 l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l 326 (530)
|++.. ...|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|+++.+ ....++|||||+++++|.+++++|
T Consensus 206 L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 98863 248999999999999999999999999999999999 99999876 467899999999999999999999
Q ss_pred HHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchh
Q 009634 327 NHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSA 406 (530)
Q Consensus 327 ~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (530)
.+++++..
T Consensus 279 ~~~~~~~~------------------------------------------------------------------------ 286 (375)
T 1miq_A 279 FANLNVIK------------------------------------------------------------------------ 286 (375)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHhCCcc------------------------------------------------------------------------
Confidence 99987530
Q ss_pred hHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceE
Q 009634 407 CEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQC 486 (530)
Q Consensus 407 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C 486 (530)
+...|.|.++|+. ..+|+|+|+|+|++++|+|++|+++....+...|
T Consensus 287 --------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C 333 (375)
T 1miq_A 287 --------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLC 333 (375)
T ss_dssp --------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEE
T ss_pred --------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeE
Confidence 1135678999997 7899999999999999999999998654334689
Q ss_pred EeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 487 ISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 487 ~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+++|+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 334 ~~~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 334 MITMLPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EESEEECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999876521 2689999999999999999999999999985
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.9e-62 Score=519.15 Aligned_cols=322 Identities=32% Similarity=0.586 Sum_probs=289.0
Q ss_pred CCcceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecC
Q 009634 90 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGT 169 (530)
Q Consensus 90 ~~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 169 (530)
+....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.+.+.|++
T Consensus 124 ~~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~Ygd 202 (451)
T 3qvc_A 124 SEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKA 202 (451)
T ss_dssp ---CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred ccCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECC
Confidence 356678999999999999999999999999999999999999999996 5789999999999999999999999999999
Q ss_pred ceEEEEEEEEEEEECCeEecceeEEEEEe----cccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEE
Q 009634 170 GAISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSF 245 (530)
Q Consensus 170 Gs~~G~~~~Dtv~lg~~~~~~~~fg~~~~----~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl 245 (530)
|++.|.+++|+|++|+..++ +.||++.. ..+ |....++||||||++..+.....+++++|++||.|++++||+
T Consensus 203 Gs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~ 279 (451)
T 3qvc_A 203 GTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSI 279 (451)
T ss_dssp EEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEE
T ss_pred CEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEE
Confidence 99999999999999999999 99999988 554 555678999999999988777889999999999999999999
Q ss_pred EecCCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHH
Q 009634 246 WLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQ 325 (530)
Q Consensus 246 ~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~ 325 (530)
||++.. ...|+|+|||+|+++|.|++.|+|+.++++|.|.++ |.|++. +.....++|||||+++++|++++++
T Consensus 280 ~L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~ 352 (451)
T 3qvc_A 280 YLPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQ 352 (451)
T ss_dssp ECCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHH
T ss_pred EEcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHH
Confidence 999873 238999999999999999999999999999999999 999998 2356789999999999999999999
Q ss_pred HHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccch
Q 009634 326 INHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCS 405 (530)
Q Consensus 326 l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (530)
|.+++++..
T Consensus 353 i~~~i~a~~----------------------------------------------------------------------- 361 (451)
T 3qvc_A 353 FVESASVFK----------------------------------------------------------------------- 361 (451)
T ss_dssp HHTTTTCEE-----------------------------------------------------------------------
T ss_pred HHHHcCCee-----------------------------------------------------------------------
Confidence 999886540
Q ss_pred hhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccce
Q 009634 406 ACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQ 485 (530)
Q Consensus 406 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~ 485 (530)
....|.|.+||+ ...+|+|+|+|+|.+++|||++|+++..+.....
T Consensus 362 ---------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~ 407 (451)
T 3qvc_A 362 ---------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSAL 407 (451)
T ss_dssp ---------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTE
T ss_pred ---------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCe
Confidence 012567999999 7789999999999999999999999876545578
Q ss_pred EEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 486 CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 486 C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
|+++|+..+. .++.||||++|||++|+|||++++|||||+|+
T Consensus 408 C~~~i~~~~~---~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 408 CMLNIVPIDL---EKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECEEECCC---STTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCC---CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999987542 15689999999999999999999999999986
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4.5e-62 Score=515.68 Aligned_cols=322 Identities=35% Similarity=0.656 Sum_probs=288.0
Q ss_pred CcceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCc
Q 009634 91 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 170 (530)
Q Consensus 91 ~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~G 170 (530)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.+.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCeEecceeEEEEEecc--cccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEec
Q 009634 171 AISGFFSQDNVKVGDLVVKNQDFIEATKEA--SITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLN 248 (530)
Q Consensus 171 s~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~--~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~ 248 (530)
++.|.+++|+|++|+.+++ +.||++.... +..|....++||||||++..+.....|++++|++||.|++++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 544556678999999999988877889999999999999999999999
Q ss_pred CCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHH
Q 009634 249 RDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 328 (530)
Q Consensus 249 ~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~ 328 (530)
+.+ ...|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|++ .+ . ....++|||||+++++|++++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999998899999999 99999 33 2 56789999999999999999999988
Q ss_pred HhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhH
Q 009634 329 AIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACE 408 (530)
Q Consensus 329 ~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (530)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 77543
Q ss_pred HHHHHHHHHhhccchhHHHhhhhhccccCCCCCCC-CeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEE
Q 009634 409 MAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNG-ESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCI 487 (530)
Q Consensus 409 ~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~-~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~ 487 (530)
+...| .|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|+
T Consensus 362 ------------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~ 410 (453)
T 2bju_A 362 ------------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCM 410 (453)
T ss_dssp ------------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEE
T ss_pred ------------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEE
Confidence 01245 68899997 78999999999999999999999986543456899
Q ss_pred eeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 488 SGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 488 ~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
++|++.+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 411 ~~~~~~~~---~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 411 LNIIGLDF---PVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp ECEEECCC---SSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCC---CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99987652 13589999999999999999999999999985
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=5.3e-61 Score=491.02 Aligned_cols=318 Identities=29% Similarity=0.536 Sum_probs=284.1
Q ss_pred cceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCc--CCCCccCCCCCCCceeCCcEEEEEecC
Q 009634 92 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSC--YFHSKYKSSHSSTYKRNGTSAAIQYGT 169 (530)
Q Consensus 92 ~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C--~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 169 (530)
...+||.|+.+..|+++|+|| ||++.|++||||+++||+|..|. ...| ..++.|+|++| ||+..++.+.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 445799999999999999999 79999999999999999999996 4689 88899999999 999999999999999
Q ss_pred ceEEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccc-cCCCCchHHHHHhCCCCCCCeEEEEec
Q 009634 170 GAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS-IGKAIPVWYNMLDQGLVKEPVFSFWLN 248 (530)
Q Consensus 170 Gs~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s-~~~~~~~~~~L~~qg~i~~~~FSl~l~ 248 (530)
|++.|.+++|+|++++.+++++.||++... +..|....++||||||++..+ .....+++++|++||.| +++||+||+
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999987 434556678999999999887 66778899999999999 999999998
Q ss_pred CCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHH
Q 009634 249 RDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 328 (530)
Q Consensus 249 ~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~ 328 (530)
+..+....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. .....++|||||+++++|++++++|++
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 864333479999999999999999999999999999999999999998764 467899999999999999999999999
Q ss_pred HhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhH
Q 009634 329 AIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACE 408 (530)
Q Consensus 329 ~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (530)
++++..
T Consensus 238 ~~~~~~-------------------------------------------------------------------------- 243 (330)
T 1yg9_A 238 AIGCVV-------------------------------------------------------------------------- 243 (330)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 986540
Q ss_pred HHHHHHHHHhhccchhHHHhhhhhccccCCCCCCC--Ce-eeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccce
Q 009634 409 MAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNG--ES-AVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQ 485 (530)
Q Consensus 409 ~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~--~~-~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~ 485 (530)
...| .| .+||+....+|+|+|+|+|++++|+|++|+++. ...
T Consensus 244 -------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~ 288 (330)
T 1yg9_A 244 -------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNL 288 (330)
T ss_dssp -------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTE
T ss_pred -------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCc
Confidence 0123 57 899997778999999999999999999999986 358
Q ss_pred EEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 486 CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 486 C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
|+++|+.. +.++.||||++|||++|+|||++++|||||+++
T Consensus 289 C~~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 289 CYSGFQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEESEEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99988754 234689999999999999999999999999985
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.5e-61 Score=497.09 Aligned_cols=326 Identities=29% Similarity=0.516 Sum_probs=287.0
Q ss_pred CcceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCc
Q 009634 91 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 170 (530)
Q Consensus 91 ~~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~G 170 (530)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||+|..|.....|..++.|+|++|+||+..++.+.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 34568999999999999999999999999999999999999999994234899899999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCeEecceeEEEEEeccc-----ccccccccceeEecccCccccCC------CCchHHHHHhCCCCC
Q 009634 171 AISGFFSQDNVKVGDLVVKNQDFIEATKEAS-----ITFLAAKFDGILGLGFQEISIGK------AIPVWYNMLDQGLVK 239 (530)
Q Consensus 171 s~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~-----~~~~~~~~~GIlGLg~~~~s~~~------~~~~~~~L~~qg~i~ 239 (530)
++.|.+++|+|++++..++++.||++....+ ..|....++||||||++..+... ..+++++|++||.|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998765 34556678999999998877543 788999999999999
Q ss_pred CCeEEEEecCCCCCCCCeEEEECcccCCCcccceEEEeccCCC----ceEEEEceEEECCeeeeecCCCceEE-EeCCCC
Q 009634 240 EPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG----YWQFEMGDVLIDGETTGYCSTGCNAI-ADSGTS 314 (530)
Q Consensus 240 ~~~FSl~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~----~w~v~l~~i~v~g~~~~~~~~~~~ai-iDSGTt 314 (530)
+++||+||.+. ...|.|+|||+|+++|.|++.|+|+.+.. +|.|.+++|.|+++.+. +.....++ |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999875 23799999999999999999999997765 99999999999998764 23467899 999999
Q ss_pred CccccHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCC
Q 009634 315 LLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKS 394 (530)
Q Consensus 315 ~i~lP~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (530)
++++|++++++|++++++..
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~------------------------------------------------------------ 261 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDA------------------------------------------------------------ 261 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTC------------------------------------------------------------
T ss_pred ceeCCHHHHHHHHHHhCCcc------------------------------------------------------------
Confidence 99999999999999987640
Q ss_pred CCCCCCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCC-CcEEEEE--C-----CEE
Q 009634 395 SDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSM-PNVSFTI--G-----GKV 466 (530)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~-P~i~f~f--g-----g~~ 466 (530)
+...+.|.++|+....+ |+|+|+| + |.+
T Consensus 262 --------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~ 297 (361)
T 1mpp_A 262 --------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTID 297 (361)
T ss_dssp --------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEE
T ss_pred --------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeE
Confidence 01245688999876677 9999999 8 899
Q ss_pred EEeCcCcceeeecccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 467 FDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 467 ~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
++|+|++|+++... +...|+++|+.. .++.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 298 VSVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp EEEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 99999999998643 245899888754 34689999999999999999999999999985
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1e-58 Score=473.22 Aligned_cols=311 Identities=35% Similarity=0.656 Sum_probs=271.7
Q ss_pred cccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCce-EEEEEE
Q 009634 99 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFS 177 (530)
Q Consensus 99 n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs-~~G~~~ 177 (530)
++.+.+|+++|+||||||++.|++||||+++||+|..|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999744 778899999999999999999999999998 899999
Q ss_pred EEEEEECCeEecceeEEEEEecccccccccccceeEecccCcccc-CCCCchHHHHHhCCCCCCCeEEEEecCCCCCCCC
Q 009634 178 QDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI-GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 256 (530)
Q Consensus 178 ~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~-~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 256 (530)
+|+|++++.+++++.||++....+. |....++||||||++..+. ....+++++|++||+|++++||+||.+.. ....
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCC
Confidence 9999999999999999999886553 5555689999999988764 35678999999999999999999997642 1237
Q ss_pred eEEEECcccCCCcccceEEEecc-CCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccCcc
Q 009634 257 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGV 335 (530)
Q Consensus 257 G~L~fGg~D~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~ 335 (530)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|++ .+ ......++|||||+++++|+++|+++.+++.+.-
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~- 242 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASD- 242 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEE-
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhccc-
Confidence 99999999999999999999996 5789999999999999 33 3467899999999999999999999999986540
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHH
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQ 415 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (530)
T Consensus 243 -------------------------------------------------------------------------------- 242 (325)
T 2apr_A 243 -------------------------------------------------------------------------------- 242 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEeccc
Q 009634 416 NKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDV 495 (530)
Q Consensus 416 ~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~ 495 (530)
+ ..+.|.++|+. ..+|+|+|+|+|.+++||+++|+++.. ...|++.|+..+
T Consensus 243 -----------------------~-~~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~- 293 (325)
T 2apr_A 243 -----------------------N-GDGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN- 293 (325)
T ss_dssp -----------------------C-SSSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES-
T ss_pred -----------------------C-CCCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC-
Confidence 0 01568899984 348999999998899999999998754 468999887543
Q ss_pred CCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 496 APPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 496 ~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
++.||||++|||++|+|||++++|||||+++
T Consensus 294 ----~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 ----WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ----SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ----CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4689999999999999999999999999985
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.3e-58 Score=473.12 Aligned_cols=313 Identities=30% Similarity=0.487 Sum_probs=270.0
Q ss_pred cccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCcee-CCcEEEEEecCce-EEEEE
Q 009634 99 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFF 176 (530)
Q Consensus 99 n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Yg~Gs-~~G~~ 176 (530)
++.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 345889999999999999999999999999999999996 33566789999999999998 6899999999998 89999
Q ss_pred EEEEEEECCeEecceeEEEEEecccccccccccceeEecccCcccc---CCCCchHHHHHhCCCCCCCeEEEEecCCCCC
Q 009634 177 SQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 253 (530)
Q Consensus 177 ~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 253 (530)
++|+|++++.+++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998765433335789999999988765 2457799999986 8899999999874
Q ss_pred CCCeEEEECcccCCCcccceEEEecc-CCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhcc
Q 009634 254 EEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 332 (530)
Q Consensus 254 ~~~G~L~fGg~D~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~ 332 (530)
..|.|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|+++.+ +.....++|||||+++++|++++++|.+++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2899999999999999999999997 5789999999999999876 34678999999999999999999999988743
Q ss_pred CcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHH
Q 009634 333 SGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVI 412 (530)
Q Consensus 333 ~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (530)
.. +
T Consensus 242 a~--------------------------------------~--------------------------------------- 244 (329)
T 3c9x_A 242 AQ--------------------------------------Y--------------------------------------- 244 (329)
T ss_dssp CE--------------------------------------E---------------------------------------
T ss_pred cE--------------------------------------E---------------------------------------
Confidence 30 0
Q ss_pred HHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEe
Q 009634 413 WMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTA 492 (530)
Q Consensus 413 ~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~ 492 (530)
....+.|.++|+ ..+|+|+|+|+|++++||+++|+++..+.+...|+++|+.
T Consensus 245 --------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~ 296 (329)
T 3c9x_A 245 --------------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQS 296 (329)
T ss_dssp --------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEE
T ss_pred --------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEc
Confidence 012466889998 5799999999999999999999987543334689998875
Q ss_pred cccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEc
Q 009634 493 FDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEA 529 (530)
Q Consensus 493 ~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a 529 (530)
.+ ..+.||||++|||++|+|||++++|||||+.
T Consensus 297 ~~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 297 SS----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CT----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CC----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 42 3468999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.8e-58 Score=472.14 Aligned_cols=310 Identities=30% Similarity=0.473 Sum_probs=267.3
Q ss_pred cCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCcee-CCcEEEEEecCce-EEEEEEE
Q 009634 101 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFFSQ 178 (530)
Q Consensus 101 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Yg~Gs-~~G~~~~ 178 (530)
.+.+|+++|+||||||++.|++||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5789999999999999999999999999999999996 3355 688999999999998 6899999999998 8999999
Q ss_pred EEEEECCeEecceeEEEEEecccccccccccceeEecccCcccc---CCCCchHHHHHhCCCCCCCeEEEEecCCCCCCC
Q 009634 179 DNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEE 255 (530)
Q Consensus 179 Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~ 255 (530)
|+|++++..++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998765433335789999999988765 2467899999887 8899999999874 2
Q ss_pred CeEEEECcccCCCcccceEEEecc-CCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccCc
Q 009634 256 GGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASG 334 (530)
Q Consensus 256 ~G~L~fGg~D~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~ 334 (530)
.|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|+++.+. .....++|||||+++++|++++++|++++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 899999999999999999999997 57899999999999998663 346789999999999999999999998874330
Q ss_pred ccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHH
Q 009634 335 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWM 414 (530)
Q Consensus 335 ~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (530)
+
T Consensus 243 --------------------------------------~----------------------------------------- 243 (329)
T 1oew_A 243 --------------------------------------S----------------------------------------- 243 (329)
T ss_dssp --------------------------------------E-----------------------------------------
T ss_pred --------------------------------------E-----------------------------------------
Confidence 0
Q ss_pred HHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEecc
Q 009634 415 QNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFD 494 (530)
Q Consensus 415 ~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~ 494 (530)
....+.|.++|+ ..+|+|+|+|+|++++||+++|+++....+...|+++|+..+
T Consensus 244 ------------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~ 297 (329)
T 1oew_A 244 ------------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA 297 (329)
T ss_dssp ------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST
T ss_pred ------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC
Confidence 012467889998 479999999999999999999998754333468999887543
Q ss_pred cCCCCCCeeeeCHHHhcceEEEEeC-CCCeEEEEEc
Q 009634 495 VAPPRGPLWILGDVFMGRYHTVFDY-GNLSIGFAEA 529 (530)
Q Consensus 495 ~~~~~~~~~ILG~~flr~~yvvfD~-~~~rIGfA~a 529 (530)
.++.||||++|||++|+|||+ +++|||||++
T Consensus 298 ----~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 298 ----GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ----TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ----CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 346899999999999999999 9999999984
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.6e-57 Score=467.05 Aligned_cols=314 Identities=28% Similarity=0.475 Sum_probs=273.6
Q ss_pred cceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCC--CCCCcCcCCCCccCCCCCCCceeCCcEEEEEecC
Q 009634 92 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGT 169 (530)
Q Consensus 92 ~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~--C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 169 (530)
...+||.|. +..|+++|+||||||++.|++||||+++||++.. |..+..|..++.|+|++|+||+..++.+.+.|++
T Consensus 2 ~i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 80 (339)
T 3fv3_A 2 SISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGD 80 (339)
T ss_dssp CEEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTT
T ss_pred ceeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECC
Confidence 346788886 6789999999999999999999999999999664 6544589989999999999999999999999999
Q ss_pred c-eEEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCcccc----------CCCCchHHHHHhCCCC
Q 009634 170 G-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI----------GKAIPVWYNMLDQGLV 238 (530)
Q Consensus 170 G-s~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~----------~~~~~~~~~L~~qg~i 238 (530)
| .+.|.+++|+|+|++..++++.||++....+ .+||||||++..+. ....+++++|++||.|
T Consensus 81 gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i 153 (339)
T 3fv3_A 81 GSTSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKI 153 (339)
T ss_dssp SCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSC
T ss_pred CceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCC
Confidence 9 5999999999999999999999999987543 48999999988753 2345689999999999
Q ss_pred CCCeEEEEecCCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccc
Q 009634 239 KEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAG 318 (530)
Q Consensus 239 ~~~~FSl~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~l 318 (530)
++++||+||++.. ...|+|+|||+|+++|.|++.|+|+..+.+|.|.+++|.++++.+.. ...++|||||+++++
T Consensus 154 ~~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~l 228 (339)
T 3fv3_A 154 RTNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYF 228 (339)
T ss_dssp SSSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEE
T ss_pred CCceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEec
Confidence 9999999998753 23899999999999999999999999989999999999999998753 368999999999999
Q ss_pred cHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCC
Q 009634 319 PTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGV 398 (530)
Q Consensus 319 P~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (530)
|++++++|++++++.. +
T Consensus 229 P~~~~~~i~~~~~~~~---------------------------------------~------------------------ 245 (339)
T 3fv3_A 229 PSDFAAQLADKAGARL---------------------------------------V------------------------ 245 (339)
T ss_dssp CHHHHHHHHHHHTCEE---------------------------------------E------------------------
T ss_pred CHHHHHHHHHHcCCEE---------------------------------------c------------------------
Confidence 9999999999997650 0
Q ss_pred CCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEE-CCEEEEeCcCcceee
Q 009634 399 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLE 477 (530)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~f-gg~~~~l~p~~y~~~ 477 (530)
..+...+.|.++|+. ..+|+|+|+| +|.+++|++++|+++
T Consensus 246 --------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~ 286 (339)
T 3fv3_A 246 --------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQ 286 (339)
T ss_dssp --------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEE
T ss_pred --------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheee
Confidence 000124568899986 5689999999 589999999999997
Q ss_pred ecccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 478 VGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 478 ~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
... ..|+++|.. .+.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~---~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 287 NGD---GTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp CSS---SCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCC---CeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 533 479988874 2469999999999999999999999999985
No 20
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-57 Score=461.86 Aligned_cols=309 Identities=29% Similarity=0.450 Sum_probs=267.6
Q ss_pred cCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCce-EEEEEEEE
Q 009634 101 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 179 (530)
Q Consensus 101 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs-~~G~~~~D 179 (530)
.+.+|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478999999999 89999999999999999999996 3456788999999999 7778999999999998 89999999
Q ss_pred EEEECCeEecceeEEEEEecccccccccccceeEecccCcccc---CCCCchHHHHHhCCCCCCCeEEEEecCCCCCCCC
Q 009634 180 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 256 (530)
Q Consensus 180 tv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 256 (530)
+|++++..++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765433335789999999988775 3567899999987 8889999999874 28
Q ss_pred eEEEECcccCCCcccceEEEecc-CCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccCcc
Q 009634 257 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGV 335 (530)
Q Consensus 257 G~L~fGg~D~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~ 335 (530)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|+++.+ +.....++|||||+++++|++++++|++++.+..
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~- 238 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ- 238 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB-
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999997 5789999999999999876 3567899999999999999999999998874320
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHH
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQ 415 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (530)
T Consensus 239 -------------------------------------------------------------------------------- 238 (325)
T 1ibq_A 239 -------------------------------------------------------------------------------- 238 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEeccc
Q 009634 416 NKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDV 495 (530)
Q Consensus 416 ~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~ 495 (530)
.....+.|.++|+ ..+|+|+|+|+|++++||+++|+++..+.+...|+++|+..+
T Consensus 239 ----------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~- 293 (325)
T 1ibq_A 239 ----------------------ESYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS- 293 (325)
T ss_dssp ----------------------CCSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT-
T ss_pred ----------------------EcCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC-
Confidence 0012466889998 479999999999999999999998754323468999887542
Q ss_pred CCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 496 APPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 496 ~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
.++.||||++|||++|+|||++++|||||+++
T Consensus 294 ---~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 294 ---GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp ---TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 34689999999999999999999999999986
No 21
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.2e-57 Score=465.43 Aligned_cols=315 Identities=26% Similarity=0.436 Sum_probs=271.2
Q ss_pred cceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCC--CCCC------CcCcCCCCccCCCCCCCceeCCcEE
Q 009634 92 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSA 163 (530)
Q Consensus 92 ~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~ 163 (530)
...+||.| .+..|+++|+||||||++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|
T Consensus 2 ~v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~ 80 (342)
T 2qzx_A 2 PVAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRF 80 (342)
T ss_dssp CEEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEE
T ss_pred ceeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcE
Confidence 34678888 4789999999999999999999999999999866 6752 2478888999999999999999999
Q ss_pred EEEecCce-EEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccC--CCCchHHHHHhCCCCCC
Q 009634 164 AIQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKE 240 (530)
Q Consensus 164 ~~~Yg~Gs-~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~ 240 (530)
.+.|++|+ +.|.+++|+|++++..++++.||++.... .++||||||++..+.. ...+++++|++||.|++
T Consensus 81 ~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~ 153 (342)
T 2qzx_A 81 DIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGK 153 (342)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSS
T ss_pred EEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCc
Confidence 99999998 68999999999999999999999998653 4689999999876542 34578999999999999
Q ss_pred CeEEEEecCCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccH
Q 009634 241 PVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPT 320 (530)
Q Consensus 241 ~~FSl~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~ 320 (530)
++||+||++.. ...|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.. ...++|||||+++++|+
T Consensus 154 ~~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~aiiDSGTt~~~lP~ 228 (342)
T 2qzx_A 154 AAYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA---NTNVLLDSGTTISYFTR 228 (342)
T ss_dssp SEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECH
T ss_pred cEEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC---CcCEEEeCCCCCEEcCH
Confidence 99999998752 33899999999999999999999999888999999999999988753 46899999999999999
Q ss_pred HHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCC
Q 009634 321 TIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHD 400 (530)
Q Consensus 321 ~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (530)
+++++|++++++... +
T Consensus 229 ~~~~~l~~~~~~~~~-------------------------------------~--------------------------- 244 (342)
T 2qzx_A 229 SIVRNILYAIGAQMK-------------------------------------F--------------------------- 244 (342)
T ss_dssp HHHHHHHHHHTCEEE-------------------------------------E---------------------------
T ss_pred HHHHHHHHHhCCeee-------------------------------------e---------------------------
Confidence 999999999976510 0
Q ss_pred cccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEE-CCEEEEeCcCcceeeec
Q 009634 401 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLEVG 479 (530)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~f-gg~~~~l~p~~y~~~~~ 479 (530)
.+...+.|.++|+. +|+|+|+| +|++++|++++|+++..
T Consensus 245 -------------------------------------~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~~~~~~~ 284 (342)
T 2qzx_A 245 -------------------------------------DSAGNKVYVADCKT---SGTIDFQFGNNLKISVPVSEFLFQTY 284 (342)
T ss_dssp -------------------------------------CTTSCEEEEECTTC---CCEEEEEETTTEEEEEEGGGGEECCB
T ss_pred -------------------------------------ccCCCcEEEEECCC---CCcEEEEECCCcEEEEcHHHhccccc
Confidence 00112368899973 89999999 79999999999999753
Q ss_pred ---ccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 480 ---EGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 480 ---~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
......|+++|... +.||||++|||++|+|||++++|||||+++
T Consensus 285 ~~~~~~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 285 YTSGKPFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp CTTSCBCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ccCCCCCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 12245799988743 359999999999999999999999999985
No 22
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-57 Score=464.48 Aligned_cols=309 Identities=28% Similarity=0.464 Sum_probs=270.1
Q ss_pred ceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCC--CCCC------CcCcCCCCccCCCCCCCceeCCcEEE
Q 009634 93 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSAA 164 (530)
Q Consensus 93 ~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~~ 164 (530)
..+||.|. +.+|+++|+||||||++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999976 6752 23798899999999999999999999
Q ss_pred EEecCce-EEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccC--CCCchHHHHHhCCCCCCC
Q 009634 165 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEP 241 (530)
Q Consensus 165 ~~Yg~Gs-~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~ 241 (530)
+.|++|+ +.|.+++|+|++++..++++.||++.... .++||||||++..+.. ...+++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999997 78999999999999999999999998653 4689999999876542 455789999999999999
Q ss_pred eEEEEecCCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHH
Q 009634 242 VFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 321 (530)
Q Consensus 242 ~FSl~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~ 321 (530)
+||+||++.. ...|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.. ...++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST---NADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC---CccEEEeCCCCcEecCHH
Confidence 9999998752 34899999999999999999999999889999999999999988753 468999999999999999
Q ss_pred HHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCc
Q 009634 322 IITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDS 401 (530)
Q Consensus 322 ~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (530)
++++|++++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999997650
Q ss_pred ccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCee-eeCCCCCCCCcEEEEE-CCEEEEeCcCcceeeec
Q 009634 402 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESA-VDCDNLSSMPNVSFTI-GGKVFDLAPNEYVLEVG 479 (530)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~-~~C~~~~~~P~i~f~f-gg~~~~l~p~~y~~~~~ 479 (530)
....+.|. ++|+. +|+|+|+| +|.+++|++++|+++..
T Consensus 243 -------------------------------------~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~y~~~~~ 282 (334)
T 1j71_A 243 -------------------------------------DSRNEIYRLPSCDL---SGDAVFNFDQGVKITVPLSELILKDS 282 (334)
T ss_dssp -------------------------------------ETTTTEEECSSSCC---CSEEEEEESTTCEEEEEGGGGEEECS
T ss_pred -------------------------------------cCCCceEEEEcCCC---CCceEEEEcCCcEEEECHHHheeecC
Confidence 01134577 89983 89999999 79999999999999854
Q ss_pred ccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 480 EGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 480 ~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
++ ..|+++|+.. +.||||++|||++|+|||++++|||||+++
T Consensus 283 ~~--~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 283 DS--SICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp SS--SCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC--CeeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 33 3599888743 359999999999999999999999999985
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=4.1e-57 Score=460.86 Aligned_cols=311 Identities=29% Similarity=0.438 Sum_probs=268.4
Q ss_pred eEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCce-E
Q 009634 94 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-I 172 (530)
Q Consensus 94 ~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs-~ 172 (530)
..|+. .+.+|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +
T Consensus 8 ~~~~~--~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~ 81 (323)
T 1izd_A 8 TNPTS--NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSA 81 (323)
T ss_dssp EEECG--GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEE
T ss_pred eeEcC--CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeE
Confidence 34553 478999999999 79999999999999999999996 3457788999999999 7777899999999998 8
Q ss_pred EEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCcccc---CCCCchHHHHHhCCCCCCCeEEEEecC
Q 009634 173 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNR 249 (530)
Q Consensus 173 ~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~ 249 (530)
.|.+++|+|++++.+++++.||++....+..+....++||||||++..+. ....+++++|++| +.+++||+||.+
T Consensus 82 ~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~ 159 (323)
T 1izd_A 82 SGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKH 159 (323)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCT
T ss_pred EEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccC
Confidence 99999999999999999999999998765433335789999999998775 3567899999987 889999999987
Q ss_pred CCCCCCCeEEEECcccCCCcccceEEEecc-CCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHH
Q 009634 250 DIEGEEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 328 (530)
Q Consensus 250 ~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~ 328 (530)
. ..|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|++ .+ +.....++|||||+++++|++++++|.+
T Consensus 160 ~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~ 232 (323)
T 1izd_A 160 N----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYE 232 (323)
T ss_dssp T----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHT
T ss_pred C----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHH
Confidence 4 2799999999999999999999996 6789999999999999 44 4567899999999999999999999998
Q ss_pred HhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhH
Q 009634 329 AIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACE 408 (530)
Q Consensus 329 ~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (530)
++.+.. +
T Consensus 233 ~i~ga~--------------------------------------~----------------------------------- 239 (323)
T 1izd_A 233 QVNGAS--------------------------------------Y----------------------------------- 239 (323)
T ss_dssp TSTTCE--------------------------------------E-----------------------------------
T ss_pred hCCCcE--------------------------------------E-----------------------------------
Confidence 874330 0
Q ss_pred HHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEe
Q 009634 409 MAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCIS 488 (530)
Q Consensus 409 ~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~ 488 (530)
....+.|.++|+ ..+|+|+|+|+|++++||+++|+++.. ....|++
T Consensus 240 ------------------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~--~~~~C~~ 285 (323)
T 1izd_A 240 ------------------------------DSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADV--GNGQTFG 285 (323)
T ss_dssp ------------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEEC--STTEEEE
T ss_pred ------------------------------cCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecC--CCCeEEE
Confidence 012467899998 579999999999999999999998753 2468999
Q ss_pred eEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 489 GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 489 ~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+|+..+ .++.||||++|||++|+|||++++|||||+++
T Consensus 286 ~i~~~~----~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 286 GIQSNS----GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp SEEECT----TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEcCC----CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 887543 34689999999999999999999999999986
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=9.2e-57 Score=462.02 Aligned_cols=315 Identities=28% Similarity=0.449 Sum_probs=269.0
Q ss_pred ceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCC--CC------CCcCcCCCCccCCCCCCCceeCCcEEE
Q 009634 93 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CY------FSVSCYFHSKYKSSHSSTYKRNGTSAA 164 (530)
Q Consensus 93 ~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~--C~------~~~~C~~~~~f~~~~SsT~~~~~~~~~ 164 (530)
..+|+.+. +.+|+++|+||||||++.|++||||+++||++.. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778775 7899999999999999999999999999998764 63 245898899999999999999999999
Q ss_pred EEecCce-EEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccC-CCCchHHHHHhCCCCCCCe
Q 009634 165 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG-KAIPVWYNMLDQGLVKEPV 242 (530)
Q Consensus 165 ~~Yg~Gs-~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~-~~~~~~~~L~~qg~i~~~~ 242 (530)
+.|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998653 4699999999886543 3467899999999999999
Q ss_pred EEEEecCCCCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHH
Q 009634 243 FSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 322 (530)
Q Consensus 243 FSl~l~~~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~ 322 (530)
||+||++.. ...|+|+|||+|+++|.|++.|+|+....+|.|.+++|.++++.+.. ....++|||||+++++|+++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999888999999999999998753 34789999999999999999
Q ss_pred HHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcc
Q 009634 323 ITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSA 402 (530)
Q Consensus 323 ~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (530)
+++|++++++...
T Consensus 231 ~~~i~~~~~~~~~------------------------------------------------------------------- 243 (342)
T 3pvk_A 231 ADQIIKAFNGKLT------------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHHHTTCEEE-------------------------------------------------------------------
T ss_pred HHHHHHHcCCeec-------------------------------------------------------------------
Confidence 9999999976510
Q ss_pred cchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEEC-CEEEEeCcCcceeeeccc
Q 009634 403 MCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIG-GKVFDLAPNEYVLEVGEG 481 (530)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fg-g~~~~l~p~~y~~~~~~~ 481 (530)
......+.|.++|+. .|+|+|+|+ |.+++||+++|+++....
T Consensus 244 ----------------------------------~~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 244 ----------------------------------QDSNGNSFYEVDCNL---SGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp ----------------------------------ECTTSCEEEEECSCC---CSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred ----------------------------------ccCCCceEEEEecCC---CCceEEEECCCCEEEEcHHHheeecccc
Confidence 000112358899984 599999997 899999999999974321
Q ss_pred c---cceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 482 V---AAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 482 ~---~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
. ...|++++.. .+.||||++|||++|++||++++|||||+++
T Consensus 287 ~g~~~~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 287 DGQPYDKCQLLFDV-------NDANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp ------CEEESEEE-------CTTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCcCCeeEEEEee-------CCCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 1 2679998874 2578999999999999999999999999985
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.6e-57 Score=461.36 Aligned_cols=311 Identities=27% Similarity=0.451 Sum_probs=266.9
Q ss_pred eEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCce-E
Q 009634 94 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-I 172 (530)
Q Consensus 94 ~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs-~ 172 (530)
..|+. .+..|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +
T Consensus 8 ~~~~~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~ 81 (323)
T 1bxo_A 8 NTPTA--NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSA 81 (323)
T ss_dssp EEECG--GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEE
T ss_pred eeecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeE
Confidence 34544 478999999999 89999999999999999999996 3457788999999999 7777899999999998 8
Q ss_pred EEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCcccc---CCCCchHHHHHhCCCCCCCeEEEEecC
Q 009634 173 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNR 249 (530)
Q Consensus 173 ~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~ 249 (530)
.|.+++|+|++++.+++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+
T Consensus 82 ~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~ 159 (323)
T 1bxo_A 82 SGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKH 159 (323)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCS
T ss_pred EEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeC
Confidence 99999999999999999999999998765433335789999999988765 2467899999987 889999999987
Q ss_pred CCCCCCCeEEEECcccCCCcccceEEEecc-CCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHH
Q 009634 250 DIEGEEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 328 (530)
Q Consensus 250 ~~~~~~~G~L~fGg~D~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~ 328 (530)
. ..|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|++ + ......++|||||+++++|++++++|++
T Consensus 160 ~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~ 231 (323)
T 1bxo_A 160 Q----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYS 231 (323)
T ss_dssp S----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHT
T ss_pred C----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHH
Confidence 4 2899999999999999999999996 6789999999999999 2 3456789999999999999999999998
Q ss_pred HhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhH
Q 009634 329 AIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACE 408 (530)
Q Consensus 329 ~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (530)
++.+.. +
T Consensus 232 ~i~~a~--------------------------------------~----------------------------------- 238 (323)
T 1bxo_A 232 QVSGAQ--------------------------------------Q----------------------------------- 238 (323)
T ss_dssp TSTTCE--------------------------------------E-----------------------------------
T ss_pred hCCCce--------------------------------------E-----------------------------------
Confidence 884330 0
Q ss_pred HHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEe
Q 009634 409 MAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCIS 488 (530)
Q Consensus 409 ~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~ 488 (530)
....+.|.++|+ ..+|+|+|+|+|++++||+++|+++... +...|++
T Consensus 239 ------------------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~ 285 (323)
T 1bxo_A 239 ------------------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLG 285 (323)
T ss_dssp ------------------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEE
T ss_pred ------------------------------cCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEE
Confidence 012467889999 4799999999999999999999987532 2368999
Q ss_pred eEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 489 GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 489 ~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+|+..+ .++.||||++|||++|+|||++++|||||+++
T Consensus 286 ~i~~~~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 286 GIQSNS----GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SEEECT----TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEECCC----CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 887543 34689999999999999999999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.5e-56 Score=455.33 Aligned_cols=312 Identities=26% Similarity=0.475 Sum_probs=265.5
Q ss_pred ceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceE
Q 009634 93 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 172 (530)
Q Consensus 93 ~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~ 172 (530)
..+||.|+ +..|+++|+||||||++.|+|||||+++||+|. +.|+|++|+++ .++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--TSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE--EEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc--cCceEEEEECCcEE
Confidence 46899997 679999999999999999999999999999742 57899887754 57899999999999
Q ss_pred EEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCcccc--------CCCCchHHHHHhCCCCCCCeEE
Q 009634 173 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--------GKAIPVWYNMLDQGLVKEPVFS 244 (530)
Q Consensus 173 ~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~--------~~~~~~~~~L~~qg~i~~~~FS 244 (530)
+|.+++|+|++++.+++++.||++....+ | ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998654 2 3579999999988765 3457899999999999999999
Q ss_pred EEecCCC-CCCCCeEEEECcccCCCcccceEEEeccC----CCceEEEEceEEECC-eeeeecCCCceEEEeCCCCCccc
Q 009634 245 FWLNRDI-EGEEGGEIVFGGVDPDHYKGEHTYVPVTK----KGYWQFEMGDVLIDG-ETTGYCSTGCNAIADSGTSLLAG 318 (530)
Q Consensus 245 l~l~~~~-~~~~~G~L~fGg~D~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g-~~~~~~~~~~~aiiDSGTt~i~l 318 (530)
+||.+.. +....|+|+|||+|+++|.|++.|+|+.+ .++|.|. .+|.|++ +.+. ....++|||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998642 12347999999999999999999999976 7899999 9999998 7663 2458999999999999
Q ss_pred cHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCC
Q 009634 319 PTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGV 398 (530)
Q Consensus 319 P~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (530)
|++++++|.+++++..
T Consensus 221 P~~~~~~l~~~~~a~~---------------------------------------------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVA---------------------------------------------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHhhCCEE----------------------------------------------------------------
Confidence 9999999988886540
Q ss_pred CCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeee
Q 009634 399 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEV 478 (530)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~ 478 (530)
....+.|.++|+....+|+|+|+|+|.+++|+|++|+++.
T Consensus 237 ----------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~ 276 (340)
T 1wkr_A 237 ----------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPR 276 (340)
T ss_dssp ----------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCG
T ss_pred ----------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhcccc
Confidence 0124678899986667999999999999999999999865
Q ss_pred cc-----cccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 479 GE-----GVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 479 ~~-----~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
.. +....|.+.|..++.+...++.||||++|||++|+|||++++|||||+++
T Consensus 277 ~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 277 NLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp GGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred ccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 42 12357998888765433344679999999999999999999999999975
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.2e-55 Score=470.35 Aligned_cols=325 Identities=26% Similarity=0.423 Sum_probs=263.5
Q ss_pred ecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEEEE
Q 009634 96 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 175 (530)
Q Consensus 96 pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~G~ 175 (530)
+|.+..+..|+++|+||||||+++|+|||||+++||+|..| |..++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 45556678999999999999999999999999999999887 6678999999999999999999999999999999
Q ss_pred EEEEEEEECC-eEec-ceeEEEEEecccccccccccceeEecccCccccC--CCCchHHHHHhCCCCCCCeEEEEecCCC
Q 009634 176 FSQDNVKVGD-LVVK-NQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRDI 251 (530)
Q Consensus 176 ~~~Dtv~lg~-~~~~-~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 251 (530)
+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ...+++++|++|+.|+ ++||+||++..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 2222 2567777665443222357899999999988764 3778999999999997 99999997631
Q ss_pred C--------CCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecC---CCceEEEeCCCCCccccH
Q 009634 252 E--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPT 320 (530)
Q Consensus 252 ~--------~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~---~~~~aiiDSGTt~i~lP~ 320 (530)
. ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.+.. +...++|||||+++++|.
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 0 23479999999999999999999999999999999999999999876432 256899999999999999
Q ss_pred HHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCC
Q 009634 321 TIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHD 400 (530)
Q Consensus 321 ~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (530)
+++++|++++++....
T Consensus 301 ~~~~~i~~~i~~~~~~---------------------------------------------------------------- 316 (455)
T 3lpj_A 301 KVFEAAVKSIKAASST---------------------------------------------------------------- 316 (455)
T ss_dssp HHHHHHHHHHHHHTTT----------------------------------------------------------------
T ss_pred HHHHHHHHHhhhhccc----------------------------------------------------------------
Confidence 9999999999765100
Q ss_pred cccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCC-CCCeeeeCCCCCC-----CCcEEEEECCE------EEE
Q 009634 401 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLSS-----MPNVSFTIGGK------VFD 468 (530)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~~-----~P~i~f~fgg~------~~~ 468 (530)
...+.. ...|.++|+.... +|+|+|+|+|. +++
T Consensus 317 -----------------------------------~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 361 (455)
T 3lpj_A 317 -----------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 361 (455)
T ss_dssp -----------------------------------SCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred -----------------------------------cccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEE
Confidence 000000 0223568876554 89999999765 599
Q ss_pred eCcCcceeeecccc--cceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 469 LAPNEYVLEVGEGV--AAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 469 l~p~~y~~~~~~~~--~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
|+|++|+++..+.. ...|++ |... ...+.||||++|||++|+|||++++|||||+++
T Consensus 362 l~~~~yi~~~~~~~~~~~~C~~-f~~~----~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 362 ILPQQYLRPVEDVATSQDDCYK-FAIS----QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp ECHHHHEEEECCTTCCSCEEEE-ECEE----EESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred ECHHHheEeccCCCCCCceEEE-Eecc----CCCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 99999999865432 257996 3211 123579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-54 Score=450.41 Aligned_cols=322 Identities=25% Similarity=0.468 Sum_probs=259.5
Q ss_pred ecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEEEE
Q 009634 96 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 175 (530)
Q Consensus 96 pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~G~ 175 (530)
+|++..+..|+++|+||||||++.|++||||+++||+|..|. .| ++.|+|++|+||+..++.+.+.|++|++.|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 677777889999999999999999999999999999998884 34 6889999999999999999999999999999
Q ss_pred EEEEEEEECCeE-ec-ceeEEEEEecccccccccccceeEecccCcccc--CCCCchHHHHHhCCCCCCCeEEEEecCC-
Q 009634 176 FSQDNVKVGDLV-VK-NQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD- 250 (530)
Q Consensus 176 ~~~Dtv~lg~~~-~~-~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~--~~~~~~~~~L~~qg~i~~~~FSl~l~~~- 250 (530)
+++|+|++++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.+ +++||+||++.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998632 22 355777654433211234679999999998775 4577899999999999 79999999752
Q ss_pred ----CCCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCC---CceEEEeCCCCCccccHHHH
Q 009634 251 ----IEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCST---GCNAIADSGTSLLAGPTTII 323 (530)
Q Consensus 251 ----~~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~---~~~aiiDSGTt~i~lP~~~~ 323 (530)
......|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+.+... ...++|||||+++++|++++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 12234899999999999999999999999889999999999999998764322 46899999999999999999
Q ss_pred HHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCccc
Q 009634 324 TQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAM 403 (530)
Q Consensus 324 ~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (530)
++|++++++.... +
T Consensus 240 ~~l~~~i~~~~~~------------------------~------------------------------------------ 253 (383)
T 2ewy_A 240 DAVVEAVARASLI------------------------P------------------------------------------ 253 (383)
T ss_dssp HHHHHHHHHTTCS------------------------S------------------------------------------
T ss_pred HHHHHHHhhhccc------------------------c------------------------------------------
Confidence 9999999765100 0
Q ss_pred chhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCC---CCeeeeCCCCC-----CCCcEEEEECC------EEEEe
Q 009634 404 CSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPN---GESAVDCDNLS-----SMPNVSFTIGG------KVFDL 469 (530)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~---~~~~~~C~~~~-----~~P~i~f~fgg------~~~~l 469 (530)
..+. ..+.++|.... .+|+|+|+|+| .+++|
T Consensus 254 -----------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 298 (383)
T 2ewy_A 254 -----------------------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITI 298 (383)
T ss_dssp -----------------------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred -----------------------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEE
Confidence 0000 12356776542 58999999975 38999
Q ss_pred CcCcceeeecc-cccceEEe-eEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 470 APNEYVLEVGE-GVAAQCIS-GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 470 ~p~~y~~~~~~-~~~~~C~~-~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+|++|+.+..+ +....|+. ++.. .++.||||++|||++|+|||++++|||||+++
T Consensus 299 ~~~~yi~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 299 LPQLYIQPMMGAGLNYECYRFGISP------STNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp CHHHHEEEECCCTTCSEEEEESEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred ChHHheeecccCCCCceeEEEEecC------CCCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 99999998642 22457985 4442 23579999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=7.2e-54 Score=450.02 Aligned_cols=323 Identities=26% Similarity=0.422 Sum_probs=259.1
Q ss_pred cccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEEEEE
Q 009634 97 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFF 176 (530)
Q Consensus 97 l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~G~~ 176 (530)
|....+..|+++|+||||||+++|+|||||+++||+|..| |..++.|+|++|+||+..++.+.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 3344467899999999999999999999999999999887 56689999999999999999999999999999999
Q ss_pred EEEEEEECC-eEecc-eeEEEEEecccccccccccceeEecccCccccCC--CCchHHHHHhCCCCCCCeEEEEecCCC-
Q 009634 177 SQDNVKVGD-LVVKN-QDFIEATKEASITFLAAKFDGILGLGFQEISIGK--AIPVWYNMLDQGLVKEPVFSFWLNRDI- 251 (530)
Q Consensus 177 ~~Dtv~lg~-~~~~~-~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~--~~~~~~~L~~qg~i~~~~FSl~l~~~~- 251 (530)
++|+|+|++ ..+.. +.|+++....+.......++||||||++..+... ..+++++|++|+.|+ ++||+||++..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 999999984 44443 3466666544322234578999999999887643 778999999999997 99999997531
Q ss_pred ----C---CCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecC---CCceEEEeCCCCCccccHH
Q 009634 252 ----E---GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPTT 321 (530)
Q Consensus 252 ----~---~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~---~~~~aiiDSGTt~i~lP~~ 321 (530)
. ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.+.. +...++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23479999999999999999999999999999999999999999876422 2568999999999999999
Q ss_pred HHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCc
Q 009634 322 IITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDS 401 (530)
Q Consensus 322 ~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (530)
++++|++++++... .
T Consensus 256 ~~~~i~~~i~~~~~-------------------------------------~---------------------------- 270 (402)
T 3vf3_A 256 VFEAAVKSIKAASS-------------------------------------T---------------------------- 270 (402)
T ss_dssp HHHHHHHHHHHHTT-------------------------------------T----------------------------
T ss_pred HHHHHHHHHhhhcc-------------------------------------c----------------------------
Confidence 99999999976510 0
Q ss_pred ccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCC-CCCeeeeCCCCC-----CCCcEEEEECCE------EEEe
Q 009634 402 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLS-----SMPNVSFTIGGK------VFDL 469 (530)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~i~f~fgg~------~~~l 469 (530)
...+.. ...|.++|+... .+|+|+|+|+|. +++|
T Consensus 271 ----------------------------------~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 316 (402)
T 3vf3_A 271 ----------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 316 (402)
T ss_dssp ----------------------------------SCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred ----------------------------------cccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEE
Confidence 000000 012357887654 599999999764 5999
Q ss_pred CcCcceeeecccc--cceEEe-eEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 470 APNEYVLEVGEGV--AAQCIS-GFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 470 ~p~~y~~~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+|++|+++..+.. ...|++ ++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 317 ~~~~yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 317 LPQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp CHHHHEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred CHHHheehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 9999999865432 247995 3321 23579999999999999999999999999975
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.2e-53 Score=447.37 Aligned_cols=323 Identities=26% Similarity=0.418 Sum_probs=258.9
Q ss_pred ecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCceEEEE
Q 009634 96 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 175 (530)
Q Consensus 96 pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs~~G~ 175 (530)
+|++..+..|+++|+||||||++.|+|||||+++||+|..|. .| ++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 556666889999999999999999999999999999999884 33 6899999999999999999999999999999
Q ss_pred EEEEEEEEC-CeEec-ceeEEEEEeccccccc-ccccceeEecccCccccC--CCCchHHHHHhCCCCCCCeEEEEecCC
Q 009634 176 FSQDNVKVG-DLVVK-NQDFIEATKEASITFL-AAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRD 250 (530)
Q Consensus 176 ~~~Dtv~lg-~~~~~-~~~fg~~~~~~~~~~~-~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~ 250 (530)
+++|+|+++ +..+. .+.|++.....+. |. ...++||||||++..+.. ...+++++|++|+.|+ ++||+||++.
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~-f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDKF-FINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESC-SCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCcc-cccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 999999998 54443 2557766543332 32 356799999999987753 5678999999999997 8999999863
Q ss_pred CC--------CCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecC---CCceEEEeCCCCCcccc
Q 009634 251 IE--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGP 319 (530)
Q Consensus 251 ~~--------~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~---~~~~aiiDSGTt~i~lP 319 (530)
.. ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+.+.. ....+||||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 10 12479999999999999999999999988999999999999999875422 24689999999999999
Q ss_pred HHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCC
Q 009634 320 TTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVH 399 (530)
Q Consensus 320 ~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (530)
++++++|++++++.... +
T Consensus 247 ~~~~~~l~~~i~~~~~~------------------------~-------------------------------------- 264 (395)
T 2qp8_A 247 KKVFEAAVKSIKAASST------------------------E-------------------------------------- 264 (395)
T ss_dssp HHHHHHHHHHHHHHTTT------------------------S--------------------------------------
T ss_pred HHHHHHHHHHHhhhccc------------------------c--------------------------------------
Confidence 99999999998754100 0
Q ss_pred CcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCC-CCCeeeeCCCCC-----CCCcEEEEECCE------EE
Q 009634 400 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP-NGESAVDCDNLS-----SMPNVSFTIGGK------VF 467 (530)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~i~f~fgg~------~~ 467 (530)
..+.. ...+.++|.... .+|+|+|+|+|. ++
T Consensus 265 -------------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 307 (395)
T 2qp8_A 265 -------------------------------------KFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 307 (395)
T ss_dssp -------------------------------------CCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred -------------------------------------cCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEE
Confidence 00000 011245676543 489999999653 79
Q ss_pred EeCcCcceeeecc--cccceEE-eeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 468 DLAPNEYVLEVGE--GVAAQCI-SGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 468 ~l~p~~y~~~~~~--~~~~~C~-~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
+|+|++|+++..+ +....|+ .++.. .++.||||++|||++|+|||++++|||||+++
T Consensus 308 ~l~p~~yi~~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 308 TILPQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred EECHHHhEeecccCCCCCceEEEEEecC------CCCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 9999999998653 2335897 45542 13579999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=5.2e-53 Score=443.42 Aligned_cols=325 Identities=16% Similarity=0.250 Sum_probs=255.7
Q ss_pred cceEecc-cccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCC-----------CCCCCcCcCCCCcc------CCCCC
Q 009634 92 TDIVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA-----------KCYFSVSCYFHSKY------KSSHS 153 (530)
Q Consensus 92 ~~~~pl~-n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~-----------~C~~~~~C~~~~~f------~~~~S 153 (530)
...+||. |+.+.+|+++|+||||||++.|+|||||+++||+|. .|. +..|..++.| ++..|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3468999 888999999999999999999999999999999999 564 4567777777 55544
Q ss_pred CCceeCCcEEEEEec-Cce-EEEEEEEEEEEECC-----------eEecceeEEEEEecccccccccccceeEecccCcc
Q 009634 154 STYKRNGTSAAIQYG-TGA-ISGFFSQDNVKVGD-----------LVVKNQDFIEATKEASITFLAAKFDGILGLGFQEI 220 (530)
Q Consensus 154 sT~~~~~~~~~~~Yg-~Gs-~~G~~~~Dtv~lg~-----------~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~ 220 (530)
+ +....|.|.+.|+ +|+ +.|.+++|+|++++ ..++++.|||+.......+....++||||||++.+
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 5556789999998 554 89999999999987 88999999999876432233467899999999876
Q ss_pred ccCCCCchHHHHHhCCCCCCCeEEEEecCCCCCCCCeEEEECcccCCCc--c-c-----ceEEEeccCC--CceEEEEce
Q 009634 221 SIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHY--K-G-----EHTYVPVTKK--GYWQFEMGD 290 (530)
Q Consensus 221 s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~~~~--~-g-----~l~~~p~~~~--~~w~v~l~~ 290 (530)
+ +..+|. ++.+.+++||+||.+.. ...|.|+||| |+++| . | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 555664 45577799999998752 2389999999 99888 5 6 9999999765 899999999
Q ss_pred EEECCeee-eecCC--------CceEEEeCCCCCccccHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCc
Q 009634 291 VLIDGETT-GYCST--------GCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQP 361 (530)
Q Consensus 291 i~v~g~~~-~~~~~--------~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~ 361 (530)
|+|+++.+ .+... ...+||||||++++||++++++|++++.+.. +.
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~-------------~~------------ 291 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL-------------PK------------ 291 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS-------------CG------------
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh-------------cc------------
Confidence 99999887 43221 2359999999999999999999999985430 00
Q ss_pred ccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCC
Q 009634 362 QKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 441 (530)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~ 441 (530)
...+ .+..
T Consensus 292 ---------------------~~~~---------------------------------------------------~~~~ 299 (403)
T 3aup_A 292 ---------------------QAQV---------------------------------------------------KSVA 299 (403)
T ss_dssp ---------------------GGEE---------------------------------------------------CCCT
T ss_pred ---------------------cccc---------------------------------------------------CCCC
Confidence 0000 0001
Q ss_pred CCCeeeeCCCCCCCCcEEEEECC---EEEEeCcCcceeeecccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEe
Q 009634 442 NGESAVDCDNLSSMPNVSFTIGG---KVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFD 518 (530)
Q Consensus 442 ~~~~~~~C~~~~~~P~i~f~fgg---~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD 518 (530)
...+.++|+.+..+|+|+|+|+| ++++|+|++|+++..+ ...|+ +|...+. ..++.||||+.|||++|+|||
T Consensus 300 ~~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD 374 (403)
T 3aup_A 300 PFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFD 374 (403)
T ss_dssp TCSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEE
T ss_pred CCCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEE
Confidence 22367899877789999999976 5999999999997642 36899 7876542 124689999999999999999
Q ss_pred CCCCeEEE-EEcC
Q 009634 519 YGNLSIGF-AEAA 530 (530)
Q Consensus 519 ~~~~rIGf-A~a~ 530 (530)
++++|||| |+++
T Consensus 375 ~~~~rIGf~A~~~ 387 (403)
T 3aup_A 375 LARSRVGFSTSSL 387 (403)
T ss_dssp TTTTEEEEESSCG
T ss_pred CCCCEEEEecccc
Confidence 99999999 7763
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.7e-52 Score=438.21 Aligned_cols=335 Identities=15% Similarity=0.191 Sum_probs=254.2
Q ss_pred CcceEeccc-ccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCC----------CCcCcCCCCccCCCC-----CC
Q 009634 91 DTDIVALNN-FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY----------FSVSCYFHSKYKSSH-----SS 154 (530)
Q Consensus 91 ~~~~~pl~n-~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~----------~~~~C~~~~~f~~~~-----Ss 154 (530)
+...+|++. ..+++|+++|+||||||+|.|++||||+++||+|..|. .+..|..++.|++.. ++
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence 345678774 46789999999999999999999999999999996542 145677777787642 34
Q ss_pred CceeCCcEEEEEec-Cce-EEEEEEEEEEEEC---------CeEecceeEEEEEecccccccccccceeEecccCccccC
Q 009634 155 TYKRNGTSAAIQYG-TGA-ISGFFSQDNVKVG---------DLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG 223 (530)
Q Consensus 155 T~~~~~~~~~~~Yg-~Gs-~~G~~~~Dtv~lg---------~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~ 223 (530)
++....|.|.+.|+ +|+ +.|++++|+|+|+ +..++++.|||+....... ....++||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 56666799999995 654 7899999999997 2678899999998753221 23568999999998876
Q ss_pred CCCchHHHHHhCCCCCCCeEEEEecCCCCCCCCeEEEECcccCCC-----cccc-eEEEeccCC--------------Cc
Q 009634 224 KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH-----YKGE-HTYVPVTKK--------------GY 283 (530)
Q Consensus 224 ~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~~~-----~~g~-l~~~p~~~~--------------~~ 283 (530)
+..+|.+++.+ +++||+||.+.. ...|.|+|||+|..+ +.|+ ++|+|+..+ .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 67889999988 799999998842 248999999998753 7888 999999754 69
Q ss_pred eEEEEceEEECCeeeeecC--------CCceEEEeCCCCCccccHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHH
Q 009634 284 WQFEMGDVLIDGETTGYCS--------TGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEML 355 (530)
Q Consensus 284 w~v~l~~i~v~g~~~~~~~--------~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~ 355 (530)
|.|++++|+||++.+.... +...+||||||++++||+++|++|.++|.+... ..++
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~--------~~~~-------- 300 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA--------ARNI-------- 300 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHH--------HTTC--------
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhc--------ccCC--------
Confidence 9999999999999886432 357899999999999999999999999865400 0000
Q ss_pred HhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccc
Q 009634 356 IAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLC 435 (530)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c 435 (530)
.+.++. ..-..|
T Consensus 301 -~~~~~~-------------------------------------------------------------------~~~~~C 312 (413)
T 3vla_A 301 -TRVASV-------------------------------------------------------------------APFGAC 312 (413)
T ss_dssp -CEECCC-------------------------------------------------------------------TTCSCE
T ss_pred -CcCCCC-------------------------------------------------------------------CCCcce
Confidence 000000 000123
Q ss_pred cCCCCCCCCeeeeCCCCCCCCcEEEEECC--EEEEeCcCcceeeecccccceEEeeEEecccCCCCCCeeeeCHHHhcce
Q 009634 436 DRLPSPNGESAVDCDNLSSMPNVSFTIGG--KVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRY 513 (530)
Q Consensus 436 ~~~~~~~~~~~~~C~~~~~~P~i~f~fgg--~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~ 513 (530)
+..+..... .....+|+|+|+|+| ++|+|+|++|+++..+ ...|+ +|...+. ..++.||||+.|||++
T Consensus 313 ~~~~~~~~~-----~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~~~~~IlGd~fl~~~ 382 (413)
T 3vla_A 313 FSTDNILST-----RLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NLRTSIVIGGHQLEDN 382 (413)
T ss_dssp EECTTCCEE-----TTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SCSSSEEECHHHHTTE
T ss_pred eccCCcccc-----ccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--CcccceeEehhhhcCe
Confidence 322110000 000268999999987 8999999999998654 36898 6665542 1346899999999999
Q ss_pred EEEEeCCCCeEEEEEc
Q 009634 514 HTVFDYGNLSIGFAEA 529 (530)
Q Consensus 514 yvvfD~~~~rIGfA~a 529 (530)
|+|||++++|||||++
T Consensus 383 ~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 383 LVQFDLATSRVGFSGT 398 (413)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCEEEEEEe
Confidence 9999999999999987
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.7e-49 Score=412.22 Aligned_cols=324 Identities=15% Similarity=0.225 Sum_probs=238.3
Q ss_pred eEecc-cccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCC-------CCcCcCCCCccCCCCCCCce-------e
Q 009634 94 IVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-------FSVSCYFHSKYKSSHSSTYK-------R 158 (530)
Q Consensus 94 ~~pl~-n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~-------~~~~C~~~~~f~~~~SsT~~-------~ 158 (530)
.+|+. ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46787 7789999999999998 999999999999996442 1345666677877533 332 1
Q ss_pred CCc-EEEEEecCce-EEEEEEEEEEEECC----eEecce----eEEEEEecccccccccccceeEecccCccccCCCCch
Q 009634 159 NGT-SAAIQYGTGA-ISGFFSQDNVKVGD----LVVKNQ----DFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPV 228 (530)
Q Consensus 159 ~~~-~~~~~Yg~Gs-~~G~~~~Dtv~lg~----~~~~~~----~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~ 228 (530)
..| .|.+.|++|+ +.|.+++|+|++++ ..++++ .|||+.......+ ...++||||||++.++ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 234 5899999998 58999999999984 466665 5699876532222 3578999999998765 6
Q ss_pred HHHHHhCCCCCCCeEEEEecCCCCCCCCeEEEECcccCC--CcccceEEEeccCC---CceEEEEceEEECCeeeeecCC
Q 009634 229 WYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPD--HYKGEHTYVPVTKK---GYWQFEMGDVLIDGETTGYCST 303 (530)
Q Consensus 229 ~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~D~~--~~~g~l~~~p~~~~---~~w~v~l~~i~v~g~~~~~~~~ 303 (530)
..+|.++|++ +++||+||.+. ..|+|+|||+|.. +|.|++.|+|+... .+|.|.+++|+|+++.+.....
T Consensus 151 ~~ql~~~~~~-~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQKV-ANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHTC-CSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhccc-CceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 6789888854 79999999875 3899999998765 58999999999753 4677999999999998864433
Q ss_pred ---CceEEEeCCCCCccccHHHHHHHHHHhccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCcccc
Q 009634 304 ---GCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFS 380 (530)
Q Consensus 304 ---~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (530)
...+||||||+++++|+++|++|.+++.+.- .. + ..++.
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~----------------------~~--~----------~~~g~---- 267 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL----------------------AA--Q----------HANGA---- 267 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH----------------------HH--C-------------------
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh----------------------cc--c----------ccccc----
Confidence 3579999999999999999999999886540 00 0 00000
Q ss_pred ccceeeeccCCCCCCCCCCCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCCC--------
Q 009634 381 MGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL-------- 452 (530)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~~-------- 452 (530)
+...+. .......+|...
T Consensus 268 -~~~~~~-----------------------------------------------------~~~~~~~~C~~~~~~~~~~~ 293 (381)
T 1t6e_X 268 -PVARAV-----------------------------------------------------EAVAPFGVCYDTKTLGNNLG 293 (381)
T ss_dssp ---CCEE-----------------------------------------------------CCCTTCSCEEEGGGCCEETT
T ss_pred -cccccC-----------------------------------------------------CCCCCCCccCCCCCCccccc
Confidence 000000 000011233322
Q ss_pred -CCCCcEEEEEC-CEEEEeCcCcceeeecccccceEEeeEEecccC---CCCCCeeeeCHHHhcceEEEEeCCCCeEEEE
Q 009634 453 -SSMPNVSFTIG-GKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVA---PPRGPLWILGDVFMGRYHTVFDYGNLSIGFA 527 (530)
Q Consensus 453 -~~~P~i~f~fg-g~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~---~~~~~~~ILG~~flr~~yvvfD~~~~rIGfA 527 (530)
..+|+|+|+|+ |++++|++++|+++..+ ...|+ +|...+.+ ...++.||||+.|||++|+|||++++|||||
T Consensus 294 ~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 294 GYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp EECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred CCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 26899999996 59999999999998643 35898 57655421 1123689999999999999999999999999
Q ss_pred EcC
Q 009634 528 EAA 530 (530)
Q Consensus 528 ~a~ 530 (530)
+++
T Consensus 371 ~~~ 373 (381)
T 1t6e_X 371 RLP 373 (381)
T ss_dssp ECC
T ss_pred ccc
Confidence 975
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.7e-48 Score=377.94 Aligned_cols=238 Identities=69% Similarity=1.174 Sum_probs=217.8
Q ss_pred cceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCce
Q 009634 92 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 171 (530)
Q Consensus 92 ~~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs 171 (530)
...+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|..+..|..++.|+|++|+||+..++.+.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 34689999999999999999999999999999999999999999964568998999999999999999999999999999
Q ss_pred EEEEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCC
Q 009634 172 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 251 (530)
Q Consensus 172 ~~G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 251 (530)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||.|++++||+||.+..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998876555666788999999998776 67889999999999999999998864
Q ss_pred CCCCCeEEEECcccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhc
Q 009634 252 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 331 (530)
Q Consensus 252 ~~~~~G~L~fGg~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~ 331 (530)
+....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.++.....++|||||+++++|++++++|.++++
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 33458999999999999999999999998899999999999999988766667899999999999999999999999997
Q ss_pred cC
Q 009634 332 AS 333 (530)
Q Consensus 332 ~~ 333 (530)
+.
T Consensus 238 a~ 239 (239)
T 1b5f_A 238 AN 239 (239)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.8e-44 Score=352.42 Aligned_cols=241 Identities=46% Similarity=0.907 Sum_probs=211.1
Q ss_pred CCeEecceeEEEEEecccccccccccceeEecccCccccCCCCchHHHHHhCCCCCCCeEEEEecCCCCCCCCeEEEECc
Q 009634 184 GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGG 263 (530)
Q Consensus 184 g~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg 263 (530)
|+.+++++.||+++...+..|....++||||||++..+.....+++++|++||.|++++||+||++.......|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 56788999999999877655666788999999999888777889999999999999999999998874333489999999
Q ss_pred ccCCCcccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHHHHHHHHHhccCcccccchhhH
Q 009634 264 VDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 343 (530)
Q Consensus 264 ~D~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~~~~l~~~i~~~~~~~~~c~~~ 343 (530)
+|+++|+|++.|+|+.+.++|.|.+++|+|+++.+. +.....+++||||+++++|++++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998753 4567899999999999999999999999986540
Q ss_pred HhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHHHHHHHHhhccch
Q 009634 344 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNET 423 (530)
Q Consensus 344 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 423 (530)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHhhhhhccccCCCCCCCCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEecccCCCCCCee
Q 009634 424 ADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLW 503 (530)
Q Consensus 424 ~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 503 (530)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++..+.....|+++|+..+.+++.++.|
T Consensus 151 ----------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 214 (241)
T 1lya_B 151 ----------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLW 214 (241)
T ss_dssp ----------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCE
T ss_pred ----------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeE
Confidence 0135688999977789999999999999999999999876544568999998876554456789
Q ss_pred eeCHHHhcceEEEEeCCCCeEEEEEcC
Q 009634 504 ILGDVFMGRYHTVFDYGNLSIGFAEAA 530 (530)
Q Consensus 504 ILG~~flr~~yvvfD~~~~rIGfA~a~ 530 (530)
|||++|||++|+|||++++|||||+++
T Consensus 215 ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 215 ILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EechHHhcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999999999986
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=2.4e-23 Score=172.75 Aligned_cols=93 Identities=58% Similarity=1.028 Sum_probs=86.8
Q ss_pred ceEecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCC-CcCcCCCCccCCCCCCCceeCCcEEEEEecCce
Q 009634 93 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 171 (530)
Q Consensus 93 ~~~pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs 171 (530)
..+||.|+.+..|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 247988999999999999999999999999999
Q ss_pred EEEEEEEEEEEECC
Q 009634 172 ISGFFSQDNVKVGD 185 (530)
Q Consensus 172 ~~G~~~~Dtv~lg~ 185 (530)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999976
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.83 E-value=8.2e-21 Score=154.66 Aligned_cols=87 Identities=72% Similarity=1.234 Sum_probs=77.1
Q ss_pred CCeeeeCCCCCCCCcEEEEECCEEEEeCcCcceeeecccccceEEeeEEecccCCCCCCeeeeCHHHhcceEEEEeCCCC
Q 009634 443 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 522 (530)
Q Consensus 443 ~~~~~~C~~~~~~P~i~f~fgg~~~~l~p~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~ 522 (530)
|.|.+||+.+..+|+|+|+|+|++++|+|++|+++...+....|+++|++.+.+ +.++.||||++|||++|+|||++++
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 578999998788999999999999999999999987654456899999987654 4557999999999999999999999
Q ss_pred eEEEEEcC
Q 009634 523 SIGFAEAA 530 (530)
Q Consensus 523 rIGfA~a~ 530 (530)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999986
No 38
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.54 E-value=2.4e-15 Score=126.75 Aligned_cols=106 Identities=44% Similarity=0.957 Sum_probs=76.4
Q ss_pred cCcccccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCCCccccccceeeeccCCCCCCCCCCCcccchhhHHHH
Q 009634 332 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 411 (530)
Q Consensus 332 ~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (530)
+.|.....|+.+++.||+.+++.++++.+|..+|.++++|..++.+.++++++++++++.++++. .++..|.+|+|++
T Consensus 3 a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~--~~~~~C~~Ce~~V 80 (108)
T 3rfi_A 3 AMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSV--GEAPLCTACEMAV 80 (108)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC--------------------------CCHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccC--CCCCcChhHHHHH
Confidence 34556678999999999999999999999999999999999999888888888887765333221 2689999999999
Q ss_pred HHHHHHhhccchhHHHhhhhhccccCCC
Q 009634 412 IWMQNKLRRNETADQILNYVNQLCDRLP 439 (530)
Q Consensus 412 ~~~~~~~~~~~t~~~~~~~~~~~c~~~~ 439 (530)
.|++++|+.|.|+++|+++++++|..+|
T Consensus 81 ~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 81 VWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999886
No 39
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=96.75 E-value=0.0007 Score=52.92 Aligned_cols=47 Identities=30% Similarity=0.675 Sum_probs=41.3
Q ss_pred cccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCC
Q 009634 401 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCD 450 (530)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~ 450 (530)
+..|.+|++++.++++.+..|.|+++|.+.+++.|..+|.+ +...|.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~ 48 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCD 48 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhH
Confidence 56899999999999999999999999999999999999863 344554
No 40
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=96.61 E-value=0.00073 Score=54.38 Aligned_cols=42 Identities=26% Similarity=0.631 Sum_probs=39.7
Q ss_pred CcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCC
Q 009634 400 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 441 (530)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~ 441 (530)
++..|.+|++++.++++.+..|.|+++|.+.++++|..+|.+
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~ 45 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS 45 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC
Confidence 567899999999999999999999999999999999999864
No 41
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=96.60 E-value=0.0011 Score=52.31 Aligned_cols=41 Identities=37% Similarity=0.694 Sum_probs=38.4
Q ss_pred cccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCC
Q 009634 401 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 441 (530)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~ 441 (530)
+..|.+|++++.++++.+..|.|+++|.+++++.|..+|.+
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 45799999999999999999999999999999999999864
No 42
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=96.23 E-value=0.0023 Score=49.72 Aligned_cols=40 Identities=23% Similarity=0.554 Sum_probs=37.2
Q ss_pred cccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCC
Q 009634 401 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 441 (530)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~ 441 (530)
+..|.+|+.++.+.+..+..| |+++|.+.+++.|..+|.+
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 467999999999999999999 9999999999999999753
No 43
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=95.96 E-value=0.0037 Score=48.09 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=35.9
Q ss_pred ccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCC
Q 009634 402 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 440 (530)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~ 440 (530)
..|.+|+.++..++..+ .|.|+++|...+++.|..+|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 46999999999999999 999999999999999999875
No 44
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=95.92 E-value=0.0043 Score=48.79 Aligned_cols=41 Identities=27% Similarity=0.643 Sum_probs=38.1
Q ss_pred CcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCC
Q 009634 400 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 440 (530)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~ 440 (530)
++..|.+|++++.+.+..+..|.|+++|.+.+++.|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 46789999999999999999999999999999999999874
No 45
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=95.70 E-value=0.0051 Score=48.19 Aligned_cols=41 Identities=32% Similarity=0.562 Sum_probs=38.0
Q ss_pred CcccchhhHHHHHHHHHHhhccchh-HHHhhhhhccccCCCC
Q 009634 400 DSAMCSACEMAVIWMQNKLRRNETA-DQILNYVNQLCDRLPS 440 (530)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~~~~c~~~~~ 440 (530)
++..|..|+.++...+..+..|.|+ ++|.+.+++.|..+|.
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~ 43 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 43 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc
Confidence 3578999999999999999999999 9999999999999985
No 46
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=95.70 E-value=0.0039 Score=48.53 Aligned_cols=39 Identities=18% Similarity=0.484 Sum_probs=37.1
Q ss_pred ccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCC
Q 009634 402 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 440 (530)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~ 440 (530)
..|.+|+.++...+..+..|.|+++|.+.+++.|..+|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 469999999999999999999999999999999999875
No 47
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=94.02 E-value=0.013 Score=47.68 Aligned_cols=51 Identities=20% Similarity=0.384 Sum_probs=42.4
Q ss_pred CCcccchhhHHHHHHHHHHhhccchhHHHhhhhhccccCCCCCCCCeeeeCCC
Q 009634 399 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDN 451 (530)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~C~~ 451 (530)
.++..|.+|+.++.+.++.+ |.|+++|.+.+++.|..+|.+...+.-.|..
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~ 69 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDH 69 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 36789999999999999999 9999999999999999988542234456754
No 48
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=93.00 E-value=0.089 Score=41.89 Aligned_cols=40 Identities=40% Similarity=0.879 Sum_probs=34.5
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccccCC
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDG 375 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (530)
+...|+.+++.|++.+++.+.+..+|+.+|..+++|..+.
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~ 85 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR 85 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC----
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCcc
Confidence 5688999999999999999999999999999999998754
No 49
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.53 E-value=0.18 Score=43.88 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=52.8
Q ss_pred ecccccCceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCce--EE
Q 009634 96 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA--IS 173 (530)
Q Consensus 96 pl~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~Gs--~~ 173 (530)
|..-.....+++++.|+. +++++++|||++.+.+..... ..+.-....+ ..+. ....|.|. ..
T Consensus 18 p~~~~~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a---~~lgl~~~~~----~~~~------~~a~g~g~~~~~ 82 (148)
T 2i1a_A 18 PEMFTQVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLA---KKTGLSRMID----KRFI------GEARGVGTGKII 82 (148)
T ss_dssp -----CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHH---HHHTGGGGCB----CCCC-----------------C
T ss_pred chhhcccceEEEEEEECC--EEEEEEEECCCCccccCHHHH---HHcCCCccCC----cceE------EEEecCCCcccc
Confidence 333334677999999986 899999999999988853211 1111101111 1111 01122222 34
Q ss_pred EEEEEEEEEECCeEecceeEEEEEecccccccccccceeEecc
Q 009634 174 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 216 (530)
Q Consensus 174 G~~~~Dtv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg 216 (530)
|....+++.+|+...+ ..|.+.. .+.+||||+.
T Consensus 83 ~~~~~~~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 83 GRIHQAQVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEEEEEEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred cEEEEEEEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 6667789999997754 5554432 1358999996
No 50
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=92.10 E-value=0.056 Score=41.81 Aligned_cols=37 Identities=22% Similarity=0.575 Sum_probs=34.7
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 372 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (530)
....|+.+++.|++.+++.+.+..+|+.+|..+++|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 4577999999999999999999999999999999995
No 51
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=91.51 E-value=0.056 Score=41.73 Aligned_cols=36 Identities=17% Similarity=0.500 Sum_probs=33.7
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCccc
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 371 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 371 (530)
....|+.+++.|++.+++.+.+..+|+.+|..+++|
T Consensus 42 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 42 IATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp THHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 456799999999999999999999999999999988
No 52
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=90.89 E-value=0.063 Score=43.61 Aligned_cols=37 Identities=24% Similarity=0.564 Sum_probs=34.7
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 372 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (530)
+...|+.+++.|++.+++.+....+|..+|..+++|+
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 5677999999999999999999999999999999994
No 53
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=90.78 E-value=0.084 Score=40.70 Aligned_cols=37 Identities=24% Similarity=0.749 Sum_probs=34.6
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 372 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (530)
+...|+.+++.|++.+++.+.+..+|+.+|..+|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 4678999999999999999999999999999999995
No 54
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=90.50 E-value=0.1 Score=40.70 Aligned_cols=37 Identities=43% Similarity=1.006 Sum_probs=34.3
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 372 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (530)
+...|+.+++.|++.+++.+.+..+|+.+|..+|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 3567999999999999999999999999999999995
No 55
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=89.55 E-value=0.16 Score=38.88 Aligned_cols=34 Identities=21% Similarity=0.577 Sum_probs=30.6
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCc
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMG 369 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 369 (530)
+...|+.++++|++++++.++.+.+|+.+|.+++
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik 74 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR 74 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence 4567999999999999999999999999998753
No 56
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=88.21 E-value=1.5 Score=37.88 Aligned_cols=26 Identities=15% Similarity=0.118 Sum_probs=23.4
Q ss_pred eeeeCHHHhcceEEEEeCCCCeEEEE
Q 009634 502 LWILGDVFMGRYHTVFDYGNLSIGFA 527 (530)
Q Consensus 502 ~~ILG~~flr~~yvvfD~~~~rIGfA 527 (530)
..|||..||+++-...|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 46999999999999999999998773
No 57
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=87.21 E-value=1.2 Score=38.88 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=23.4
Q ss_pred eeeeCHHHhcceEEEEeCCCCeEEEE
Q 009634 502 LWILGDVFMGRYHTVFDYGNLSIGFA 527 (530)
Q Consensus 502 ~~ILG~~flr~~yvvfD~~~~rIGfA 527 (530)
..|||..||+++-.+.|++++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 46999999999999999999998763
No 58
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=86.70 E-value=0.25 Score=38.38 Aligned_cols=36 Identities=39% Similarity=0.876 Sum_probs=33.1
Q ss_pred ccchhhHHhhhhhHHHHHHHhc-cCcccccccCcccc
Q 009634 337 SQECKTLVDQYGKTILEMLIAE-TQPQKICSQMGLCT 372 (530)
Q Consensus 337 ~~~c~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~ 372 (530)
...|+.+++.|++.+++.+.+. .+|+.+|..+|+|.
T Consensus 46 ~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 46 SASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 5679999999999999999988 49999999999995
No 59
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=85.51 E-value=0.3 Score=37.88 Aligned_cols=36 Identities=31% Similarity=0.849 Sum_probs=30.6
Q ss_pred cccchhhHHhhhhhHHHHHHHhccCcccccccCcccc
Q 009634 336 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 372 (530)
Q Consensus 336 ~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (530)
....|+.+++.||+.+++.+ +..+|+.+|.++|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l-~~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQMM-MHMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCHHHHHhhcCCCC
Confidence 45779999999999776655 5799999999999995
No 60
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=84.68 E-value=1.4 Score=38.40 Aligned_cols=91 Identities=15% Similarity=0.295 Sum_probs=53.9
Q ss_pred CceEEEEEEEcCCCceEEEEEcCCCCCceeeCCCCCCCcCcCCCCccCCCCCCCceeCCcEEEEEecCc--eEEEEEEEE
Q 009634 102 DAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG--AISGFFSQD 179 (530)
Q Consensus 102 ~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~G--s~~G~~~~D 179 (530)
-..|++++.|+. +++++++|||++.+.+... |. ..|.-...-+ .. +. ....+-| ...|.....
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~-~A--~rlGL~~~~~-~~---~~------~~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQA-CA--ERCNIMRLVD-RR---WA------GVAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHH-HH--HHTTCGGGEE-GG---GC------EECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHH-HH--HHcCCccccC-cc---ee------EEEEcCCccEEEEEEEEE
Confidence 457899999986 9999999999999998642 21 1221100000 00 00 0112222 256777788
Q ss_pred EEEECCeEecceeEEEEEecccccccccccceeEecc
Q 009634 180 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 216 (530)
Q Consensus 180 tv~lg~~~~~~~~fg~~~~~~~~~~~~~~~~GIlGLg 216 (530)
.+.+|+..++ ..|.+.. ....++|||+-
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 9999997653 4443332 12358999996
No 61
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=74.12 E-value=3 Score=27.89 Aligned_cols=24 Identities=13% Similarity=-0.117 Sum_probs=19.5
Q ss_pred ceEEEeeeeecchhhhhhccCccc
Q 009634 45 GLVRIGLRKKKLDQINRLVGQTVS 68 (530)
Q Consensus 45 ~~~~ipl~~~~~~~~~~~~~~~~~ 68 (530)
.++||||+|.++.++...+.+...
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~ 30 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDM 30 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCG
T ss_pred ceeEEeeeecccHHHHHHHcCchH
Confidence 568999999999999888766543
No 62
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=73.80 E-value=4 Score=32.79 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=24.9
Q ss_pred EEEEEEcCCCceEEEEEcCCCCCceeeCCCC
Q 009634 106 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 136 (530)
Q Consensus 106 ~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 136 (530)
++.+.||. |.+++++|||.+++.+...+.
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCCSS
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecccC
Confidence 56799997 999999999999999976544
No 63
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=73.10 E-value=3.5 Score=33.48 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=23.3
Q ss_pred EEEEEEEcCCCceEEEEEcCCCCCceee
Q 009634 105 YFGEVSIGTPSQTFTVIFDTGSSNLWVP 132 (530)
Q Consensus 105 Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~ 132 (530)
-++.|.||. |.+++++|||.+++.+.
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEc
Confidence 467899996 99999999999999997
No 64
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=67.52 E-value=7 Score=31.37 Aligned_cols=29 Identities=24% Similarity=0.286 Sum_probs=24.8
Q ss_pred EEEEEEcCCCceEEEEEcCCCCCceeeCCCC
Q 009634 106 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 136 (530)
Q Consensus 106 ~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 136 (530)
++.+.||. |.+..++|||.+++.+...++
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 56799997 999999999999999975544
No 65
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=65.47 E-value=5.2 Score=32.87 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=25.9
Q ss_pred EEEEEEc---CCCceEEEEEcCCCCCceeeCCCC
Q 009634 106 FGEVSIG---TPSQTFTVIFDTGSSNLWVPSAKC 136 (530)
Q Consensus 106 ~~~i~iG---tP~Q~~~v~lDTGSs~~WV~~~~C 136 (530)
.+.|.|| +|+|.+..++|||.+++.+...++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4566666 778999999999999999987665
No 66
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=64.86 E-value=2.4 Score=33.17 Aligned_cols=51 Identities=24% Similarity=0.365 Sum_probs=39.8
Q ss_pred HHHHHHHHHh-ccCcccccchhhHHhhhhhHHHHHHHhccCcccccccCccc
Q 009634 321 TIITQINHAI-GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 371 (530)
Q Consensus 321 ~~~~~l~~~i-~~~~~~~~~c~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 371 (530)
..+++.=+.+ ++..+....|+.++++|.+.+++.+-+..+|..+|..++.|
T Consensus 36 ~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 36 KEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 3344444433 43444567899999999999999999999999999998877
No 67
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=57.92 E-value=9.4 Score=31.57 Aligned_cols=26 Identities=12% Similarity=0.162 Sum_probs=22.5
Q ss_pred EEEEEEcCCCceEEEEEcCCCCCceeeCC
Q 009634 106 FGEVSIGTPSQTFTVIFDTGSSNLWVPSA 134 (530)
Q Consensus 106 ~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~ 134 (530)
++ |.||. |.++.++|||.+++.+...
T Consensus 16 ~v-ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred EE-EEECC--EEEEEEecCCCCcEEEccc
Confidence 44 99996 9999999999999999743
No 68
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=50.93 E-value=16 Score=30.03 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=24.9
Q ss_pred EEEEEEcCCCceEEEEEcCCCCCceeeCCCC
Q 009634 106 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 136 (530)
Q Consensus 106 ~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 136 (530)
.+.+.||. |.+..++|||.+++-+...+.
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecccC
Confidence 56788986 999999999999999976554
No 69
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=44.79 E-value=26 Score=29.60 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=25.1
Q ss_pred eEEEEEEEcCCCceEEEEEcCCCCCceeeCCC
Q 009634 104 QYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK 135 (530)
Q Consensus 104 ~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~ 135 (530)
.-++.+.|+. |.+.+++|||.+++.+....
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 4567789987 99999999999999997543
No 70
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=37.72 E-value=18 Score=23.43 Aligned_cols=22 Identities=18% Similarity=0.083 Sum_probs=17.5
Q ss_pred eEEEeeeeecchhhhhhccCcc
Q 009634 46 LVRIGLRKKKLDQINRLVGQTV 67 (530)
Q Consensus 46 ~~~ipl~~~~~~~~~~~~~~~~ 67 (530)
++||||+|.++.++.+.+.+..
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~ 23 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLL 23 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCH
T ss_pred eEEEeeeEcchHHHHHHHcCcH
Confidence 6899999999888877765543
No 71
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=37.06 E-value=16 Score=22.30 Aligned_cols=22 Identities=18% Similarity=0.138 Sum_probs=16.7
Q ss_pred ceEEEeeeeecchhhhhhccCc
Q 009634 45 GLVRIGLRKKKLDQINRLVGQT 66 (530)
Q Consensus 45 ~~~~ipl~~~~~~~~~~~~~~~ 66 (530)
.++||||+|.++.++.+.+.+.
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~ 23 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQ 23 (35)
T ss_pred cEEEEEeEEchHHHHHHHHccc
Confidence 4689999998888877665443
No 72
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=36.42 E-value=30 Score=31.47 Aligned_cols=29 Identities=21% Similarity=0.319 Sum_probs=24.6
Q ss_pred eEEEEEEEcCCCceEEEEEcCCCCCceeeCC
Q 009634 104 QYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA 134 (530)
Q Consensus 104 ~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~ 134 (530)
.-.+.|.||. |.+.+++|||.+++.+...
T Consensus 8 RP~vtv~I~G--q~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 8 RPLVTIRIGG--QLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CCeEEEEECC--EEEEEEEecCCCceEEecc
Confidence 3467899997 9999999999999999643
No 73
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=35.42 E-value=41 Score=32.65 Aligned_cols=42 Identities=17% Similarity=0.092 Sum_probs=30.1
Q ss_pred cceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHH
Q 009634 271 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 322 (530)
Q Consensus 271 g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~ 322 (530)
|.+...|+.....|.++ |.||.+.+ .+++|||++.+++|..-
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKSTL-------HLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEEE-------EEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEEE-------EEEEeCCCccceEeeCC
Confidence 45566677666677654 56774443 68999999999999753
No 74
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=35.09 E-value=42 Score=32.56 Aligned_cols=43 Identities=28% Similarity=0.217 Sum_probs=30.9
Q ss_pred ccceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHH
Q 009634 270 KGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 322 (530)
Q Consensus 270 ~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~ 322 (530)
.|.+...|+.....|.+ .|.||.+.+ .+++|||++.+++|..-
T Consensus 3 ~g~v~~~~~~~~~~Y~~---~i~iG~Q~~-------~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 3 SGVATNTPTANDEEYIT---PVTIGGTTL-------NLNFDTGSADLWVFSTE 45 (323)
T ss_dssp CEEEEEEECGGGSCEEE---EEEETTEEE-------EEEEETTCCCEEECBTT
T ss_pred CCceeeeecCCCCEEEE---EEEECCEEE-------EEEEeCCCcceEEecCC
Confidence 35566677766666765 467774443 68999999999999753
No 75
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=34.52 E-value=36 Score=28.37 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=18.5
Q ss_pred ceEEEEEcCCCCCceeeCCCC
Q 009634 116 QTFTVIFDTGSSNLWVPSAKC 136 (530)
Q Consensus 116 Q~~~v~lDTGSs~~WV~~~~C 136 (530)
|.+..++|||.+++.+...+.
T Consensus 30 q~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 30 VYITALLDSGADITIISEEDW 50 (124)
T ss_dssp EEEEEEECTTCSSCEEETTTS
T ss_pred EEEEEEecCCCCcEEEecccC
Confidence 888999999999999986654
No 76
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=32.95 E-value=33 Score=26.98 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=22.3
Q ss_pred CCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHH
Q 009634 281 KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 321 (530)
Q Consensus 281 ~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~ 321 (530)
...|.+ .|.||.- .....++||||++.+++|..
T Consensus 12 ~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 12 DAQYYG---EIGIGTP-----PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TTEEEE---EEEETTT-----TEEEEEEEETTCCCEEEEBT
T ss_pred CCeEEE---EEEECCC-----CeEEEEEEeCCCCceEEeEc
Confidence 344544 4677731 22347999999999999964
No 77
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=32.02 E-value=50 Score=32.01 Aligned_cols=42 Identities=19% Similarity=0.153 Sum_probs=29.9
Q ss_pred cceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHHH
Q 009634 271 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 322 (530)
Q Consensus 271 g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~~ 322 (530)
|.+...|+.....|.+ .|.||.+. ..+++|||++.+++|..-
T Consensus 4 ~~v~~~~~~~~~~Y~~---~i~iG~q~-------~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSNDEEYIT---QVTVGDDT-------LGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGGCCEEE---EEEETTEE-------EEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCCCEEEE---EEEECCEE-------EEEEEcCCCcceEEecCC
Confidence 4556667666666754 46777443 369999999999999753
No 78
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=24.10 E-value=82 Score=30.47 Aligned_cols=43 Identities=21% Similarity=0.051 Sum_probs=28.1
Q ss_pred cceEEE-eccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHH
Q 009634 271 GEHTYV-PVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 321 (530)
Q Consensus 271 g~l~~~-p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~ 321 (530)
|.+... |......|.+ .|.||.- .....+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLDDAYIT---PVQIGTP-----AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCCCEEEE---EEEECCC-----CeEEEEEECCCCCCeEEecC
Confidence 344455 5555566654 4677731 12347999999999999964
No 79
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=23.02 E-value=79 Score=30.99 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=29.4
Q ss_pred ccceEEEeccC--CCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHH
Q 009634 270 KGEHTYVPVTK--KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 321 (530)
Q Consensus 270 ~g~l~~~p~~~--~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~ 321 (530)
+|.....|+.. ...|.+ .|.||.- .....++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 46666778754 455654 4677731 12346899999999999964
No 80
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=22.01 E-value=96 Score=29.98 Aligned_cols=43 Identities=16% Similarity=0.008 Sum_probs=27.8
Q ss_pred cceEEE-eccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHH
Q 009634 271 GEHTYV-PVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 321 (530)
Q Consensus 271 g~l~~~-p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~ 321 (530)
|.+... |......|.+ .|.||.- .....+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYIT---SVSIGTP-----AQVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred cceeeecCCCCCCEEEE---EEEECCC-----CeEEEEEEcCCCCCeEEecC
Confidence 344445 4445556654 4677731 12347999999999999975
No 81
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=21.08 E-value=82 Score=28.93 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=26.8
Q ss_pred eEecccccCceEEEE---EEEcCC-----CceEEEEEcCCCCCceeeC
Q 009634 94 IVALNNFMDAQYFGE---VSIGTP-----SQTFTVIFDTGSSNLWVPS 133 (530)
Q Consensus 94 ~~pl~n~~~~~Y~~~---i~iGtP-----~Q~~~v~lDTGSs~~WV~~ 133 (530)
.+|+.. ...|.++ |.||.- .....+++|||++.+++|.
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 456654 3456654 678762 3457899999999999974
No 82
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=20.65 E-value=1.1e+02 Score=29.56 Aligned_cols=42 Identities=19% Similarity=-0.001 Sum_probs=26.4
Q ss_pred ceEEEeccCCCceEEEEceEEECCeeeeecCCCceEEEeCCCCCccccHH
Q 009634 272 EHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 321 (530)
Q Consensus 272 ~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDSGTt~i~lP~~ 321 (530)
.....+......|.+ .|.||.- .....+++|||++.+++|..
T Consensus 5 ~v~~~~~~~~~~Y~~---~i~iGTP-----~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGNDIEYYG---QVTIGTP-----GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTTTEEEE---EEEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred ceeeeecCCCCEEEE---EEEECCC-----CeEEEEEEcCCCCCEEEccC
Confidence 333344444555654 4667731 12347999999999999964
Done!