Query 009635
Match_columns 530
No_of_seqs 264 out of 2865
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 09:37:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009635.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009635hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s3e_A Amine oxidase [flavin-c 100.0 8.1E-40 2.8E-44 339.2 31.2 432 56-515 3-457 (520)
2 3ka7_A Oxidoreductase; structu 100.0 1.8E-38 6.2E-43 321.4 39.8 417 58-509 1-424 (425)
3 2vvm_A Monoamine oxidase N; FA 100.0 2.2E-39 7.4E-44 334.4 25.0 432 57-520 39-493 (495)
4 2yg5_A Putrescine oxidase; oxi 100.0 1E-37 3.5E-42 318.4 26.0 429 56-513 4-452 (453)
5 3i6d_A Protoporphyrinogen oxid 100.0 7.4E-38 2.5E-42 321.3 24.0 422 57-512 5-468 (470)
6 3nrn_A Uncharacterized protein 100.0 1E-35 3.5E-40 300.5 39.0 401 58-508 1-403 (421)
7 2ivd_A PPO, PPOX, protoporphyr 100.0 1.5E-36 5.3E-41 311.9 30.2 420 54-514 13-475 (478)
8 3nks_A Protoporphyrinogen oxid 100.0 1.9E-36 6.3E-41 311.3 29.5 420 57-511 2-473 (477)
9 4dgk_A Phytoene dehydrogenase; 100.0 9.2E-36 3.1E-40 308.0 34.7 433 57-515 1-494 (501)
10 3lov_A Protoporphyrinogen oxid 100.0 1E-36 3.4E-41 312.9 23.7 429 57-519 4-472 (475)
11 1sez_A Protoporphyrinogen oxid 100.0 2.6E-36 8.9E-41 312.2 22.4 429 55-515 11-496 (504)
12 4gde_A UDP-galactopyranose mut 100.0 8.8E-35 3E-39 301.7 20.1 419 56-511 9-478 (513)
13 3k7m_X 6-hydroxy-L-nicotine ox 100.0 3.2E-32 1.1E-36 275.9 35.7 411 58-511 2-425 (431)
14 2iid_A L-amino-acid oxidase; f 100.0 6.4E-33 2.2E-37 286.2 27.7 429 55-514 31-486 (498)
15 1b37_A Protein (polyamine oxid 100.0 1.6E-33 5.5E-38 288.4 22.7 423 56-514 3-460 (472)
16 2jae_A L-amino acid oxidase; o 100.0 5.4E-34 1.8E-38 293.6 19.0 425 54-514 8-487 (489)
17 1rsg_A FMS1 protein; FAD bindi 100.0 2E-33 6.7E-38 290.7 20.2 421 56-514 7-509 (516)
18 4gut_A Lysine-specific histone 100.0 2.7E-32 9.2E-37 290.1 22.7 410 55-510 334-775 (776)
19 4dsg_A UDP-galactopyranose mut 100.0 9.1E-32 3.1E-36 274.7 23.4 415 56-509 8-452 (484)
20 2xag_A Lysine-specific histone 100.0 5.4E-30 1.9E-34 273.8 25.8 242 265-525 566-842 (852)
21 3ayj_A Pro-enzyme of L-phenyla 100.0 1.5E-30 5E-35 270.4 19.9 449 57-516 56-683 (721)
22 2z3y_A Lysine-specific histone 100.0 1E-29 3.5E-34 269.0 24.4 231 265-514 395-660 (662)
23 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 9E-29 3.1E-33 242.4 27.2 222 271-512 111-342 (342)
24 2b9w_A Putative aminooxidase; 100.0 6.3E-28 2.2E-32 243.8 21.2 409 55-509 4-423 (424)
25 1yvv_A Amine oxidase, flavin-c 99.9 6.2E-25 2.1E-29 214.8 27.7 326 57-515 2-330 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 7.7E-25 2.6E-29 218.1 11.2 369 56-514 6-389 (399)
27 2bcg_G Secretory pathway GDP d 99.9 9.5E-23 3.3E-27 206.6 24.5 387 55-509 9-438 (453)
28 3p1w_A Rabgdi protein; GDI RAB 99.9 7.6E-22 2.6E-26 197.2 23.3 263 53-329 16-313 (475)
29 2bi7_A UDP-galactopyranose mut 99.9 4.3E-22 1.5E-26 196.9 20.1 251 57-364 3-260 (384)
30 1d5t_A Guanine nucleotide diss 99.9 1.5E-20 5E-25 189.3 30.6 386 55-509 4-427 (433)
31 1i8t_A UDP-galactopyranose mut 99.9 1.9E-22 6.6E-27 198.3 15.7 256 57-368 1-261 (367)
32 3hdq_A UDP-galactopyranose mut 99.9 1.6E-20 5.4E-25 184.3 19.3 357 54-511 26-390 (397)
33 1vg0_A RAB proteins geranylger 99.8 3.8E-15 1.3E-19 153.1 35.1 254 121-407 239-507 (650)
34 2e1m_A L-glutamate oxidase; L- 99.7 2.6E-17 9E-22 160.0 13.4 81 54-134 41-131 (376)
35 3kkj_A Amine oxidase, flavin-c 99.7 1.9E-15 6.5E-20 143.8 26.3 66 57-123 2-67 (336)
36 3dje_A Fructosyl amine: oxygen 99.7 1.1E-15 3.9E-20 154.5 22.4 64 271-336 160-226 (438)
37 2gag_B Heterotetrameric sarcos 99.7 1.5E-15 5E-20 152.1 18.7 203 271-511 173-375 (405)
38 3dme_A Conserved exported prot 99.7 5.7E-16 1.9E-20 153.0 14.1 59 271-330 149-209 (369)
39 1y56_B Sarcosine oxidase; dehy 99.6 1.1E-15 3.8E-20 151.7 13.7 205 271-511 148-355 (382)
40 3nyc_A D-arginine dehydrogenas 99.6 2E-16 6.7E-21 157.1 7.6 57 271-330 153-209 (381)
41 3ps9_A TRNA 5-methylaminomethy 99.6 5.2E-13 1.8E-17 142.1 32.0 62 271-335 416-477 (676)
42 3pvc_A TRNA 5-methylaminomethy 99.6 2.8E-14 9.6E-19 152.0 21.9 62 271-335 411-473 (689)
43 1ryi_A Glycine oxidase; flavop 99.6 5E-14 1.7E-18 139.7 22.2 198 271-511 163-362 (382)
44 2gf3_A MSOX, monomeric sarcosi 99.6 5.1E-14 1.7E-18 140.0 20.6 62 271-336 149-210 (389)
45 2oln_A NIKD protein; flavoprot 99.6 3.1E-14 1.1E-18 142.0 16.7 57 271-330 152-208 (397)
46 3nlc_A Uncharacterized protein 99.6 1.2E-13 4E-18 141.3 20.6 58 272-330 220-277 (549)
47 3axb_A Putative oxidoreductase 99.5 6.9E-15 2.4E-19 149.2 9.3 63 271-335 180-258 (448)
48 3da1_A Glycerol-3-phosphate de 99.5 2.4E-13 8.2E-18 140.8 15.9 59 271-330 169-232 (561)
49 2rgh_A Alpha-glycerophosphate 99.5 2.5E-12 8.5E-17 133.5 22.9 59 271-330 187-250 (571)
50 3oz2_A Digeranylgeranylglycero 99.5 7E-12 2.4E-16 124.7 23.5 39 57-95 4-42 (397)
51 3rp8_A Flavoprotein monooxygen 99.5 1E-12 3.4E-17 131.5 16.7 55 272-330 127-181 (407)
52 2uzz_A N-methyl-L-tryptophan o 99.5 1.1E-14 3.9E-19 143.8 2.3 62 271-336 148-209 (372)
53 2i0z_A NAD(FAD)-utilizing dehy 99.5 2.2E-13 7.7E-18 137.6 11.6 59 271-330 133-191 (447)
54 4at0_A 3-ketosteroid-delta4-5a 99.4 9.6E-13 3.3E-17 135.2 15.4 58 273-330 203-264 (510)
55 3nix_A Flavoprotein/dehydrogen 99.4 6.3E-12 2.2E-16 126.3 20.9 65 272-336 106-173 (421)
56 3cgv_A Geranylgeranyl reductas 99.4 2.6E-11 8.8E-16 120.7 23.9 58 272-330 102-162 (397)
57 1y0p_A Fumarate reductase flav 99.4 3E-12 1E-16 133.5 17.3 59 272-330 255-317 (571)
58 1c0p_A D-amino acid oxidase; a 99.4 1.6E-11 5.5E-16 120.7 20.9 40 55-94 4-43 (363)
59 1qo8_A Flavocytochrome C3 fuma 99.4 1.4E-12 4.9E-17 135.6 14.0 59 272-330 250-312 (566)
60 3ihg_A RDME; flavoenzyme, anth 99.4 2.7E-11 9.4E-16 125.4 23.5 64 272-335 120-189 (535)
61 2qcu_A Aerobic glycerol-3-phos 99.4 2.3E-11 7.9E-16 124.6 22.1 58 271-330 148-210 (501)
62 1pj5_A N,N-dimethylglycine oxi 99.4 6.9E-14 2.4E-18 152.2 3.5 58 271-330 150-207 (830)
63 3v76_A Flavoprotein; structura 99.4 1.6E-12 5.6E-17 129.3 11.8 57 271-330 131-187 (417)
64 3i3l_A Alkylhalidase CMLS; fla 99.4 1.8E-11 6.2E-16 127.0 19.9 58 272-330 128-188 (591)
65 3fmw_A Oxygenase; mithramycin, 99.4 1.8E-11 6.1E-16 126.8 19.3 63 272-336 148-214 (570)
66 2qa2_A CABE, polyketide oxygen 99.3 6.2E-10 2.1E-14 113.7 27.5 63 272-336 107-173 (499)
67 2qa1_A PGAE, polyketide oxygen 99.3 2.8E-10 9.5E-15 116.3 24.6 62 273-336 107-172 (500)
68 2gmh_A Electron transfer flavo 99.3 1.9E-10 6.5E-15 119.7 22.9 59 272-330 144-217 (584)
69 3g3e_A D-amino-acid oxidase; F 99.3 4.2E-12 1.4E-16 124.3 9.6 188 271-514 141-336 (351)
70 1d4d_A Flavocytochrome C fumar 99.3 5.7E-11 1.9E-15 123.5 15.7 59 272-330 255-317 (572)
71 3e1t_A Halogenase; flavoprotei 99.2 2.3E-10 8E-15 117.5 19.5 63 272-335 111-178 (512)
72 3atr_A Conserved archaeal prot 99.2 3.2E-09 1.1E-13 107.4 27.4 58 272-330 100-162 (453)
73 1k0i_A P-hydroxybenzoate hydro 99.2 4E-10 1.4E-14 112.0 20.4 63 273-336 104-170 (394)
74 2gqf_A Hypothetical protein HI 99.2 4.8E-11 1.7E-15 118.3 13.3 58 271-330 108-168 (401)
75 2wdq_A Succinate dehydrogenase 99.2 1.6E-10 5.4E-15 120.2 17.4 59 272-330 143-206 (588)
76 3c4n_A Uncharacterized protein 99.2 3.2E-12 1.1E-16 127.5 3.4 57 271-330 171-236 (405)
77 1chu_A Protein (L-aspartate ox 99.2 9.8E-11 3.3E-15 120.6 13.4 59 272-330 138-208 (540)
78 4hb9_A Similarities with proba 99.2 1.1E-10 3.7E-15 116.8 12.8 44 286-330 123-166 (412)
79 2dkh_A 3-hydroxybenzoate hydro 99.2 5.5E-09 1.9E-13 110.1 25.7 65 273-337 142-219 (639)
80 2bs2_A Quinol-fumarate reducta 99.2 2.2E-10 7.4E-15 120.2 14.8 58 272-330 158-220 (660)
81 2weu_A Tryptophan 5-halogenase 99.1 7.3E-10 2.5E-14 114.0 16.6 59 271-330 172-230 (511)
82 2xdo_A TETX2 protein; tetracyc 99.1 3.5E-10 1.2E-14 112.5 12.9 39 56-94 25-63 (398)
83 2h88_A Succinate dehydrogenase 99.1 3.9E-10 1.3E-14 117.4 13.7 58 272-330 155-217 (621)
84 3gwf_A Cyclohexanone monooxyge 99.1 2.8E-10 9.4E-15 117.1 12.3 54 277-330 92-147 (540)
85 4ap3_A Steroid monooxygenase; 99.1 2.7E-10 9.1E-15 117.5 11.3 43 55-97 19-61 (549)
86 2x3n_A Probable FAD-dependent 99.1 1.1E-10 3.8E-15 116.2 8.2 64 272-336 107-173 (399)
87 2vou_A 2,6-dihydroxypyridine h 99.1 1.3E-09 4.6E-14 108.2 15.9 61 56-132 4-65 (397)
88 2aqj_A Tryptophan halogenase, 99.1 9.6E-10 3.3E-14 113.8 14.9 59 271-330 164-222 (538)
89 1rp0_A ARA6, thiazole biosynth 99.1 3.6E-10 1.2E-14 106.7 10.6 40 56-95 38-78 (284)
90 3alj_A 2-methyl-3-hydroxypyrid 99.1 1E-09 3.4E-14 108.4 14.2 59 272-335 107-166 (379)
91 2e1m_C L-glutamate oxidase; L- 99.1 4.2E-11 1.5E-15 104.0 3.4 103 410-516 48-156 (181)
92 3o0h_A Glutathione reductase; 99.1 1.9E-10 6.6E-15 117.3 8.9 57 272-330 232-288 (484)
93 3itj_A Thioredoxin reductase 1 99.1 2.9E-10 1E-14 110.3 9.6 45 54-98 19-67 (338)
94 2r0c_A REBC; flavin adenine di 99.1 1.2E-08 4.2E-13 105.5 21.8 61 56-132 25-85 (549)
95 4a9w_A Monooxygenase; baeyer-v 99.0 7.5E-10 2.6E-14 108.3 11.2 41 57-97 3-43 (357)
96 2e4g_A Tryptophan halogenase; 99.0 4.1E-09 1.4E-13 109.1 17.3 59 271-330 193-252 (550)
97 1mo9_A ORF3; nucleotide bindin 99.0 3.1E-09 1E-13 109.4 16.0 59 272-330 255-316 (523)
98 2bry_A NEDD9 interacting prote 99.0 9.6E-10 3.3E-14 112.2 11.8 40 55-94 90-129 (497)
99 3jsk_A Cypbp37 protein; octame 99.0 1.5E-09 5E-14 103.4 11.8 41 56-96 78-120 (344)
100 1w4x_A Phenylacetone monooxyge 99.0 1.1E-09 3.7E-14 113.3 11.9 43 54-96 13-55 (542)
101 1kf6_A Fumarate reductase flav 99.0 1E-09 3.6E-14 114.3 11.8 58 272-330 134-197 (602)
102 2e5v_A L-aspartate oxidase; ar 99.0 1.5E-09 5E-14 110.1 12.2 56 272-330 119-176 (472)
103 2pyx_A Tryptophan halogenase; 99.0 5.4E-09 1.9E-13 107.7 16.5 59 271-330 174-233 (526)
104 3lxd_A FAD-dependent pyridine 99.0 1.1E-09 3.9E-14 109.4 10.7 58 272-330 194-251 (415)
105 2cul_A Glucose-inhibited divis 99.0 2.4E-09 8.1E-14 97.8 11.8 56 273-330 69-125 (232)
106 2zxi_A TRNA uridine 5-carboxym 99.0 2.7E-09 9.4E-14 109.4 13.3 59 273-333 124-183 (637)
107 3ces_A MNMG, tRNA uridine 5-ca 99.0 2.1E-09 7.1E-14 110.7 11.9 59 273-333 125-184 (651)
108 3ab1_A Ferredoxin--NADP reduct 99.0 1.9E-09 6.4E-14 105.7 11.0 41 56-96 13-53 (360)
109 3uox_A Otemo; baeyer-villiger 99.0 1.8E-09 6.2E-14 111.2 11.2 41 56-96 8-48 (545)
110 4fk1_A Putative thioredoxin re 99.0 4.4E-09 1.5E-13 100.4 13.2 38 56-94 5-42 (304)
111 3fg2_P Putative rubredoxin red 99.0 9.4E-10 3.2E-14 109.5 8.4 58 272-330 184-241 (404)
112 2gjc_A Thiazole biosynthetic e 99.0 5.9E-09 2E-13 98.7 13.3 41 56-96 64-106 (326)
113 4dna_A Probable glutathione re 99.0 1.7E-09 5.9E-14 109.7 10.2 60 272-333 211-271 (463)
114 2zbw_A Thioredoxin reductase; 98.9 5.2E-09 1.8E-13 101.4 13.0 41 56-96 4-44 (335)
115 1jnr_A Adenylylsulfate reducta 98.9 4.3E-09 1.5E-13 110.7 13.3 59 272-330 151-218 (643)
116 3lzw_A Ferredoxin--NADP reduct 98.9 3.6E-09 1.2E-13 102.3 11.4 40 57-96 7-46 (332)
117 1pn0_A Phenol 2-monooxygenase; 98.9 2.2E-07 7.6E-12 98.0 25.3 61 56-132 7-72 (665)
118 3c96_A Flavin-containing monoo 98.9 5.9E-09 2E-13 104.1 12.6 37 57-93 4-41 (410)
119 3k30_A Histamine dehydrogenase 98.9 3.7E-09 1.3E-13 112.5 11.8 45 54-98 388-432 (690)
120 3f8d_A Thioredoxin reductase ( 98.9 8.5E-09 2.9E-13 99.2 12.8 40 56-97 14-53 (323)
121 3d1c_A Flavin-containing putat 98.9 3.1E-09 1.1E-13 104.5 9.9 52 276-330 92-143 (369)
122 3gyx_A Adenylylsulfate reducta 98.9 7.6E-09 2.6E-13 108.4 12.8 59 272-330 166-233 (662)
123 3urh_A Dihydrolipoyl dehydroge 98.9 7.7E-09 2.6E-13 105.7 12.5 42 56-97 24-65 (491)
124 3r9u_A Thioredoxin reductase; 98.9 6.1E-09 2.1E-13 99.9 10.8 42 56-98 3-45 (315)
125 3ef6_A Toluene 1,2-dioxygenase 98.9 8.5E-10 2.9E-14 110.0 4.3 57 272-330 185-241 (410)
126 3cp8_A TRNA uridine 5-carboxym 98.9 8.1E-09 2.8E-13 106.3 11.1 56 273-330 118-174 (641)
127 1fec_A Trypanothione reductase 98.9 2.3E-09 7.8E-14 109.4 6.9 57 273-330 232-288 (490)
128 3oc4_A Oxidoreductase, pyridin 98.9 2.7E-09 9.2E-14 107.9 7.3 56 272-330 189-244 (452)
129 1ges_A Glutathione reductase; 98.8 1.3E-08 4.5E-13 102.7 11.6 57 273-330 209-265 (450)
130 2ywl_A Thioredoxin reductase r 98.8 2.6E-08 8.8E-13 87.0 11.6 51 276-330 60-110 (180)
131 3s5w_A L-ornithine 5-monooxyge 98.8 5.3E-09 1.8E-13 106.2 8.0 38 56-93 29-71 (463)
132 1y56_A Hypothetical protein PH 98.8 2.8E-08 9.5E-13 101.4 12.9 52 277-330 262-313 (493)
133 2yqu_A 2-oxoglutarate dehydrog 98.8 1.7E-08 5.8E-13 102.1 11.1 57 272-330 208-264 (455)
134 3ics_A Coenzyme A-disulfide re 98.8 4.7E-08 1.6E-12 102.3 14.5 53 272-328 228-280 (588)
135 1onf_A GR, grase, glutathione 98.8 2.4E-08 8.1E-13 102.2 11.9 58 272-330 217-275 (500)
136 3iwa_A FAD-dependent pyridine 98.8 6E-08 2.1E-12 98.6 14.8 57 272-330 202-258 (472)
137 2hqm_A GR, grase, glutathione 98.8 5.3E-09 1.8E-13 106.4 6.9 58 273-330 227-285 (479)
138 2q7v_A Thioredoxin reductase; 98.8 3.1E-08 1.1E-12 95.5 11.9 41 56-97 7-47 (325)
139 2gv8_A Monooxygenase; FMO, FAD 98.8 1.9E-08 6.6E-13 101.4 10.7 42 56-97 5-48 (447)
140 2r9z_A Glutathione amide reduc 98.8 2.5E-08 8.7E-13 100.9 11.5 56 273-330 208-264 (463)
141 1xdi_A RV3303C-LPDA; reductase 98.8 7E-09 2.4E-13 106.2 7.2 60 273-334 224-283 (499)
142 2wpf_A Trypanothione reductase 98.8 5.4E-09 1.8E-13 106.7 6.2 57 273-330 236-292 (495)
143 2q0l_A TRXR, thioredoxin reduc 98.8 2.8E-08 9.6E-13 95.1 10.7 38 58-96 2-40 (311)
144 3dk9_A Grase, GR, glutathione 98.8 2.2E-08 7.5E-13 102.0 10.4 59 272-330 228-293 (478)
145 3lad_A Dihydrolipoamide dehydr 98.8 1.3E-08 4.4E-13 103.7 8.6 41 56-96 2-42 (476)
146 1trb_A Thioredoxin reductase; 98.7 3.1E-08 1.1E-12 95.2 10.4 57 273-330 185-247 (320)
147 1fl2_A Alkyl hydroperoxide red 98.7 7.1E-08 2.4E-12 92.2 12.6 53 278-330 62-115 (310)
148 3fbs_A Oxidoreductase; structu 98.7 4.3E-08 1.5E-12 93.0 10.7 41 472-514 253-293 (297)
149 1vdc_A NTR, NADPH dependent th 98.7 3.9E-08 1.3E-12 95.1 10.1 33 56-88 7-39 (333)
150 1q1r_A Putidaredoxin reductase 98.7 2.4E-08 8.2E-13 100.1 8.7 58 273-330 192-250 (431)
151 2xve_A Flavin-containing monoo 98.7 9.3E-08 3.2E-12 96.7 12.8 41 58-98 3-49 (464)
152 1dxl_A Dihydrolipoamide dehydr 98.7 1E-07 3.5E-12 96.8 12.0 43 55-97 4-46 (470)
153 1v59_A Dihydrolipoamide dehydr 98.7 7.8E-08 2.7E-12 97.9 11.1 42 56-97 4-45 (478)
154 1hyu_A AHPF, alkyl hydroperoxi 98.7 6.6E-08 2.2E-12 99.3 10.5 53 278-330 273-326 (521)
155 3dgh_A TRXR-1, thioredoxin red 98.7 1.3E-07 4.5E-12 96.3 12.6 58 272-330 227-289 (483)
156 2a87_A TRXR, TR, thioredoxin r 98.7 1.2E-07 4E-12 91.8 11.7 40 55-95 12-51 (335)
157 3h8l_A NADH oxidase; membrane 98.7 2.1E-07 7.3E-12 92.7 13.6 52 272-329 218-269 (409)
158 3klj_A NAD(FAD)-dependent dehy 98.7 8.5E-08 2.9E-12 94.4 10.5 44 282-329 72-115 (385)
159 1ojt_A Surface protein; redox- 98.6 5.6E-08 1.9E-12 99.0 9.4 42 56-97 5-46 (482)
160 3ntd_A FAD-dependent pyridine 98.6 2.1E-07 7.3E-12 96.9 14.0 57 272-329 192-266 (565)
161 2qae_A Lipoamide, dihydrolipoy 98.6 1.7E-07 5.7E-12 95.2 12.7 41 57-97 2-42 (468)
162 2cdu_A NADPH oxidase; flavoenz 98.6 1.9E-08 6.4E-13 101.7 5.5 57 272-330 191-247 (452)
163 2v3a_A Rubredoxin reductase; a 98.6 1.3E-08 4.4E-13 100.6 3.7 57 272-330 187-243 (384)
164 3l8k_A Dihydrolipoyl dehydroge 98.6 1.8E-07 6.1E-12 94.8 11.5 42 57-98 4-45 (466)
165 3qvp_A Glucose oxidase; oxidor 98.6 8.5E-08 2.9E-12 98.8 8.8 36 55-90 17-53 (583)
166 3qfa_A Thioredoxin reductase 1 98.6 8E-07 2.7E-11 91.2 15.4 35 56-90 31-65 (519)
167 1m6i_A Programmed cell death p 98.6 1.8E-07 6E-12 95.4 9.9 57 272-330 226-282 (493)
168 1ebd_A E3BD, dihydrolipoamide 98.5 3.4E-07 1.1E-11 92.6 11.5 40 57-97 3-42 (455)
169 3h28_A Sulfide-quinone reducta 98.5 1.7E-07 5.9E-12 93.9 9.4 39 57-95 2-42 (430)
170 3fpz_A Thiazole biosynthetic e 98.5 3.3E-08 1.1E-12 95.3 3.8 42 56-97 64-107 (326)
171 3dgz_A Thioredoxin reductase 2 98.5 8.9E-07 3E-11 90.2 14.5 42 55-96 4-53 (488)
172 2a8x_A Dihydrolipoyl dehydroge 98.5 4.3E-07 1.5E-11 92.0 12.0 40 57-97 3-42 (464)
173 4b1b_A TRXR, thioredoxin reduc 98.5 1.8E-07 6E-12 95.8 8.6 57 272-330 263-319 (542)
174 2gqw_A Ferredoxin reductase; f 98.5 2.4E-08 8.1E-13 99.4 2.1 52 273-330 188-239 (408)
175 4g6h_A Rotenone-insensitive NA 98.4 7.3E-07 2.5E-11 90.8 11.3 55 272-328 272-330 (502)
176 4eqs_A Coenzyme A disulfide re 98.4 1.3E-06 4.4E-11 87.6 12.8 54 271-330 187-240 (437)
177 3q9t_A Choline dehydrogenase a 98.4 2.6E-07 8.8E-12 95.3 7.9 37 55-91 4-41 (577)
178 1n4w_A CHOD, cholesterol oxida 98.4 9.9E-07 3.4E-11 90.1 12.0 62 273-334 222-292 (504)
179 4gcm_A TRXR, thioredoxin reduc 98.4 1.5E-07 5.1E-12 90.0 5.5 41 56-97 5-45 (312)
180 1coy_A Cholesterol oxidase; ox 98.4 1.1E-06 3.7E-11 89.9 11.5 62 273-334 227-297 (507)
181 3vrd_B FCCB subunit, flavocyto 98.4 7E-08 2.4E-12 95.9 2.3 45 283-329 213-257 (401)
182 4b63_A L-ornithine N5 monooxyg 98.4 5.3E-07 1.8E-11 92.0 8.6 43 54-96 36-78 (501)
183 3fim_B ARYL-alcohol oxidase; A 98.4 5.8E-07 2E-11 92.5 8.2 36 57-92 2-38 (566)
184 3cgb_A Pyridine nucleotide-dis 98.4 1.9E-06 6.6E-11 87.5 12.0 37 57-93 36-74 (480)
185 1xhc_A NADH oxidase /nitrite r 98.4 1.9E-06 6.3E-11 84.3 11.3 34 57-91 8-41 (367)
186 3t37_A Probable dehydrogenase; 98.3 2.4E-06 8.3E-11 88.0 12.3 37 55-91 15-52 (526)
187 1nhp_A NADH peroxidase; oxidor 98.3 2.5E-06 8.7E-11 85.8 12.2 36 58-93 1-38 (447)
188 3sx6_A Sulfide-quinone reducta 98.3 1.1E-06 3.6E-11 88.3 8.8 34 57-90 4-40 (437)
189 3hyw_A Sulfide-quinone reducta 98.3 9.5E-07 3.3E-11 88.4 7.9 33 58-90 3-37 (430)
190 4a5l_A Thioredoxin reductase; 98.3 4.6E-07 1.6E-11 86.6 4.9 36 56-91 3-38 (314)
191 2bc0_A NADH oxidase; flavoprot 98.3 1.8E-06 6.2E-11 88.0 9.3 37 57-93 35-74 (490)
192 2jbv_A Choline oxidase; alcoho 98.3 5E-06 1.7E-10 85.6 12.6 38 56-93 12-50 (546)
193 2vdc_G Glutamate synthase [NAD 98.2 1E-06 3.5E-11 88.6 6.3 43 55-97 120-162 (456)
194 3cty_A Thioredoxin reductase; 98.2 8.8E-07 3E-11 84.9 5.0 41 56-97 15-55 (319)
195 1zmd_A Dihydrolipoyl dehydroge 98.1 1.2E-06 4.1E-11 89.0 4.1 43 55-97 4-46 (474)
196 1o94_A Tmadh, trimethylamine d 98.1 3.1E-06 1.1E-10 90.4 5.9 44 55-98 387-430 (729)
197 3ic9_A Dihydrolipoamide dehydr 98.1 1.4E-06 4.8E-11 88.7 3.1 39 57-96 8-46 (492)
198 3c4a_A Probable tryptophan hyd 98.1 3E-06 1E-10 83.3 5.4 35 58-92 1-37 (381)
199 1zk7_A HGII, reductase, mercur 98.1 2.8E-06 9.4E-11 86.1 5.2 56 272-330 216-271 (467)
200 3ihm_A Styrene monooxygenase A 98.0 2.6E-06 8.8E-11 85.3 4.7 35 56-90 21-55 (430)
201 3pl8_A Pyranose 2-oxidase; sub 98.0 3.5E-06 1.2E-10 88.0 5.1 41 56-96 45-85 (623)
202 1nhp_A NADH peroxidase; oxidor 98.0 2.9E-05 1E-09 78.0 11.7 36 56-91 148-183 (447)
203 1v59_A Dihydrolipoamide dehydr 98.0 3.8E-05 1.3E-09 77.9 11.8 35 57-91 183-217 (478)
204 1lvl_A Dihydrolipoamide dehydr 98.0 3.1E-06 1.1E-10 85.4 3.7 41 56-97 4-44 (458)
205 3g5s_A Methylenetetrahydrofola 98.0 1.1E-05 3.8E-10 77.2 7.1 39 58-96 2-40 (443)
206 2eq6_A Pyruvate dehydrogenase 97.9 4.4E-05 1.5E-09 77.1 11.6 34 58-91 170-203 (464)
207 1ps9_A 2,4-dienoyl-COA reducta 97.9 7.9E-06 2.7E-10 86.6 6.2 44 54-97 370-413 (671)
208 2eq6_A Pyruvate dehydrogenase 97.9 7.1E-06 2.4E-10 83.0 4.4 56 273-330 211-271 (464)
209 2bc0_A NADH oxidase; flavoprot 97.9 7.6E-05 2.6E-09 75.9 11.8 50 278-330 242-291 (490)
210 3cgb_A Pyridine nucleotide-dis 97.8 5.7E-05 2E-09 76.6 10.6 50 278-330 233-282 (480)
211 1ebd_A E3BD, dihydrolipoamide 97.8 6.9E-05 2.4E-09 75.5 11.1 35 57-91 170-204 (455)
212 2e1m_B L-glutamate oxidase; L- 97.8 1.7E-05 5.8E-10 63.6 5.2 105 315-435 4-110 (130)
213 1zmd_A Dihydrolipoyl dehydroge 97.8 0.00011 3.8E-09 74.4 12.3 35 57-91 178-212 (474)
214 2gag_A Heterotetrameric sarcos 97.8 1.2E-05 4E-10 88.5 5.1 41 57-97 128-168 (965)
215 1gte_A Dihydropyrimidine dehyd 97.8 1.6E-05 5.5E-10 88.1 5.7 41 56-96 186-227 (1025)
216 1lvl_A Dihydrolipoamide dehydr 97.8 6.6E-05 2.3E-09 75.6 9.7 35 57-91 171-205 (458)
217 3kd9_A Coenzyme A disulfide re 97.8 1.8E-05 6E-10 79.7 5.2 39 57-95 3-43 (449)
218 1ojt_A Surface protein; redox- 97.8 6.4E-05 2.2E-09 76.3 9.3 55 278-334 232-290 (482)
219 1cjc_A Protein (adrenodoxin re 97.7 1.9E-05 6.6E-10 79.4 4.9 41 56-96 5-47 (460)
220 2qae_A Lipoamide, dihydrolipoy 97.7 0.00018 6.1E-09 72.8 12.0 35 57-91 174-208 (468)
221 1lqt_A FPRA; NADP+ derivative, 97.7 1.7E-05 5.9E-10 79.7 4.4 41 57-97 3-50 (456)
222 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00019 6.6E-09 72.4 12.0 35 57-91 171-205 (464)
223 1kdg_A CDH, cellobiose dehydro 97.7 2.3E-05 7.8E-10 81.0 5.1 58 276-334 199-265 (546)
224 1xhc_A NADH oxidase /nitrite r 97.7 0.00011 3.6E-09 71.8 9.3 34 58-91 144-177 (367)
225 1zk7_A HGII, reductase, mercur 97.7 0.0002 7E-09 72.3 11.5 35 57-91 176-210 (467)
226 2x8g_A Thioredoxin glutathione 97.7 2.8E-05 9.6E-10 81.3 5.2 35 55-89 105-139 (598)
227 3lad_A Dihydrolipoamide dehydr 97.6 0.0003 1E-08 71.3 12.2 51 278-330 227-280 (476)
228 3ic9_A Dihydrolipoamide dehydr 97.6 0.00032 1.1E-08 71.3 12.1 35 57-91 174-208 (492)
229 1dxl_A Dihydrolipoamide dehydr 97.6 0.00019 6.4E-09 72.6 9.8 35 57-91 177-211 (470)
230 1ju2_A HydroxynitrIle lyase; f 97.6 2.2E-05 7.4E-10 80.7 2.7 37 55-92 24-60 (536)
231 3s5w_A L-ornithine 5-monooxyge 97.5 0.00093 3.2E-08 67.3 13.9 36 56-91 226-263 (463)
232 2zbw_A Thioredoxin reductase; 97.4 0.00079 2.7E-08 64.5 11.5 34 57-90 152-185 (335)
233 3dgz_A Thioredoxin reductase 2 97.4 0.0011 3.9E-08 67.2 12.7 32 58-89 186-217 (488)
234 3ab1_A Ferredoxin--NADP reduct 97.4 0.00064 2.2E-08 66.0 10.3 34 57-90 163-196 (360)
235 3uox_A Otemo; baeyer-villiger 97.3 0.0018 6.1E-08 66.5 13.2 49 276-331 342-392 (545)
236 3kd9_A Coenzyme A disulfide re 97.2 0.0017 5.7E-08 65.2 11.7 34 57-90 148-181 (449)
237 3cty_A Thioredoxin reductase; 97.2 0.0022 7.4E-08 61.0 11.8 33 57-89 155-187 (319)
238 1gpe_A Protein (glucose oxidas 97.2 0.00024 8.2E-09 73.7 4.7 38 55-92 22-60 (587)
239 3d1c_A Flavin-containing putat 97.2 0.0011 3.8E-08 64.4 9.2 34 57-90 166-199 (369)
240 1fl2_A Alkyl hydroperoxide red 97.1 0.0035 1.2E-07 59.2 12.1 34 57-90 144-177 (310)
241 2q0l_A TRXR, thioredoxin reduc 97.1 0.004 1.4E-07 58.8 12.2 34 57-90 143-176 (311)
242 3qfa_A Thioredoxin reductase 1 97.1 0.0034 1.2E-07 64.1 12.3 32 58-89 211-242 (519)
243 2x8g_A Thioredoxin glutathione 97.0 0.0044 1.5E-07 64.6 12.5 32 58-89 287-318 (598)
244 3fbs_A Oxidoreductase; structu 96.8 0.0052 1.8E-07 57.5 9.9 42 282-329 184-225 (297)
245 3f8d_A Thioredoxin reductase ( 96.8 0.008 2.8E-07 56.9 11.4 33 57-89 154-186 (323)
246 4gcm_A TRXR, thioredoxin reduc 96.6 0.002 7E-08 61.0 5.6 34 58-91 146-179 (312)
247 3fwz_A Inner membrane protein 96.4 0.0043 1.5E-07 50.9 5.9 36 56-91 6-41 (140)
248 1o94_A Tmadh, trimethylamine d 96.4 0.0082 2.8E-07 64.0 9.3 35 56-90 527-563 (729)
249 2g1u_A Hypothetical protein TM 96.2 0.0057 2E-07 51.1 5.6 36 56-91 18-53 (155)
250 2gag_A Heterotetrameric sarcos 96.2 0.015 5.1E-07 64.0 10.2 33 57-89 284-316 (965)
251 1lss_A TRK system potassium up 96.2 0.0052 1.8E-07 50.2 4.9 34 57-90 4-37 (140)
252 3klj_A NAD(FAD)-dependent dehy 96.0 0.0052 1.8E-07 60.1 4.9 37 57-93 146-182 (385)
253 3llv_A Exopolyphosphatase-rela 95.9 0.0082 2.8E-07 49.2 5.0 34 57-90 6-39 (141)
254 3ic5_A Putative saccharopine d 95.7 0.011 3.9E-07 46.4 4.7 34 57-90 5-39 (118)
255 2v3a_A Rubredoxin reductase; a 95.6 0.014 4.9E-07 56.9 6.1 38 57-94 145-182 (384)
256 3ado_A Lambda-crystallin; L-gu 95.6 0.011 3.8E-07 55.5 4.9 35 56-90 5-39 (319)
257 3ef6_A Toluene 1,2-dioxygenase 95.6 0.013 4.3E-07 57.9 5.6 38 56-93 142-179 (410)
258 2yqu_A 2-oxoglutarate dehydrog 95.5 0.011 3.9E-07 59.1 5.3 36 57-92 167-202 (455)
259 1id1_A Putative potassium chan 95.4 0.019 6.5E-07 47.7 5.4 33 57-89 3-35 (153)
260 1f0y_A HCDH, L-3-hydroxyacyl-C 95.4 0.016 5.6E-07 54.4 5.3 34 56-89 14-47 (302)
261 2gqw_A Ferredoxin reductase; f 95.3 0.019 6.6E-07 56.5 6.1 39 56-94 144-182 (408)
262 4a5l_A Thioredoxin reductase; 95.3 0.013 4.6E-07 55.2 4.8 34 56-89 151-184 (314)
263 1ges_A Glutathione reductase; 95.2 0.019 6.4E-07 57.4 5.7 37 57-93 167-203 (450)
264 4eqs_A Coenzyme A disulfide re 95.2 0.027 9.3E-07 56.0 6.6 59 57-132 147-205 (437)
265 2hmt_A YUAA protein; RCK, KTN, 95.1 0.023 7.7E-07 46.5 4.9 33 58-90 7-39 (144)
266 3c85_A Putative glutathione-re 95.1 0.022 7.4E-07 49.0 4.8 34 57-90 39-73 (183)
267 2r9z_A Glutathione amide reduc 95.0 0.025 8.7E-07 56.7 5.7 37 57-93 166-202 (463)
268 3lk7_A UDP-N-acetylmuramoylala 94.9 0.022 7.5E-07 56.8 5.1 35 56-90 8-42 (451)
269 3l4b_C TRKA K+ channel protien 94.8 0.022 7.5E-07 50.6 4.3 33 58-90 1-33 (218)
270 2x5o_A UDP-N-acetylmuramoylala 94.8 0.022 7.7E-07 56.6 4.8 37 57-93 5-41 (439)
271 1q1r_A Putidaredoxin reductase 94.8 0.034 1.2E-06 55.2 6.0 37 57-93 149-185 (431)
272 3k6j_A Protein F01G10.3, confi 94.8 0.034 1.2E-06 55.0 5.9 36 56-91 53-88 (460)
273 3fg2_P Putative rubredoxin red 94.7 0.025 8.5E-07 55.6 4.7 37 57-93 142-178 (404)
274 1pzg_A LDH, lactate dehydrogen 94.7 0.036 1.2E-06 52.7 5.6 36 55-90 7-43 (331)
275 2a9f_A Putative malic enzyme ( 94.6 0.029 9.9E-07 53.7 4.8 36 55-90 186-222 (398)
276 3k96_A Glycerol-3-phosphate de 94.5 0.032 1.1E-06 53.6 4.9 34 56-89 28-61 (356)
277 3gwf_A Cyclohexanone monooxyge 94.5 0.029 9.9E-07 57.4 4.8 36 56-91 177-212 (540)
278 2hqm_A GR, grase, glutathione 94.5 0.04 1.4E-06 55.5 5.7 37 57-93 185-221 (479)
279 2dpo_A L-gulonate 3-dehydrogen 94.4 0.036 1.2E-06 52.2 4.9 34 57-90 6-39 (319)
280 4e12_A Diketoreductase; oxidor 94.4 0.038 1.3E-06 51.3 5.0 34 57-90 4-37 (283)
281 3oc4_A Oxidoreductase, pyridin 94.4 0.037 1.3E-06 55.3 5.2 37 57-93 147-183 (452)
282 1onf_A GR, grase, glutathione 94.4 0.037 1.3E-06 56.1 5.2 37 57-93 176-212 (500)
283 2xve_A Flavin-containing monoo 94.4 0.041 1.4E-06 55.2 5.5 37 56-92 196-232 (464)
284 3dfz_A SIRC, precorrin-2 dehyd 94.4 0.039 1.3E-06 48.8 4.7 34 56-89 30-63 (223)
285 1kyq_A Met8P, siroheme biosynt 94.3 0.027 9.1E-07 51.6 3.7 35 56-90 12-46 (274)
286 1vl6_A Malate oxidoreductase; 94.3 0.039 1.3E-06 52.7 4.8 34 56-89 191-225 (388)
287 4dio_A NAD(P) transhydrogenase 94.3 0.046 1.6E-06 52.8 5.4 35 56-90 189-223 (405)
288 2y0c_A BCEC, UDP-glucose dehyd 94.3 0.038 1.3E-06 55.4 5.0 35 56-90 7-41 (478)
289 3e8x_A Putative NAD-dependent 94.2 0.05 1.7E-06 48.8 5.4 35 56-90 20-55 (236)
290 3i83_A 2-dehydropantoate 2-red 94.2 0.044 1.5E-06 51.9 5.1 33 58-90 3-35 (320)
291 3doj_A AT3G25530, dehydrogenas 94.2 0.054 1.8E-06 51.0 5.6 36 55-90 19-54 (310)
292 4ap3_A Steroid monooxygenase; 94.2 0.034 1.2E-06 57.0 4.5 36 56-91 190-225 (549)
293 2cdu_A NADPH oxidase; flavoenz 94.1 0.044 1.5E-06 54.8 5.2 37 57-93 149-185 (452)
294 2raf_A Putative dinucleotide-b 94.0 0.056 1.9E-06 47.6 5.1 36 56-91 18-53 (209)
295 3lxd_A FAD-dependent pyridine 94.0 0.057 2E-06 53.2 5.8 37 57-93 152-188 (415)
296 3eag_A UDP-N-acetylmuramate:L- 94.0 0.055 1.9E-06 51.3 5.3 35 56-90 3-38 (326)
297 3hn2_A 2-dehydropantoate 2-red 93.9 0.045 1.5E-06 51.6 4.6 33 58-90 3-35 (312)
298 1vdc_A NTR, NADPH dependent th 93.9 0.047 1.6E-06 51.9 4.7 36 56-91 158-193 (333)
299 1lld_A L-lactate dehydrogenase 93.9 0.056 1.9E-06 51.1 5.2 35 56-90 6-42 (319)
300 1ks9_A KPA reductase;, 2-dehyd 93.9 0.056 1.9E-06 50.3 5.2 33 58-90 1-33 (291)
301 3p2y_A Alanine dehydrogenase/p 93.9 0.052 1.8E-06 52.1 4.8 35 56-90 183-217 (381)
302 3ntd_A FAD-dependent pyridine 93.8 0.059 2E-06 55.6 5.6 37 57-93 151-187 (565)
303 2a87_A TRXR, TR, thioredoxin r 93.8 0.054 1.9E-06 51.6 4.9 36 56-91 154-189 (335)
304 3urh_A Dihydrolipoyl dehydroge 93.8 0.055 1.9E-06 54.7 5.1 35 57-91 198-232 (491)
305 2q7v_A Thioredoxin reductase; 93.7 0.056 1.9E-06 51.2 4.8 35 57-91 152-186 (325)
306 1trb_A Thioredoxin reductase; 93.7 0.055 1.9E-06 51.0 4.8 37 56-92 144-180 (320)
307 3g79_A NDP-N-acetyl-D-galactos 93.7 0.058 2E-06 53.7 5.0 36 56-91 17-54 (478)
308 3vtf_A UDP-glucose 6-dehydroge 93.7 0.062 2.1E-06 52.8 5.1 37 54-90 18-54 (444)
309 3l8k_A Dihydrolipoyl dehydroge 93.7 0.069 2.4E-06 53.5 5.7 35 57-91 172-206 (466)
310 1zej_A HBD-9, 3-hydroxyacyl-CO 93.7 0.058 2E-06 50.0 4.7 34 56-90 11-44 (293)
311 3dk9_A Grase, GR, glutathione 93.7 0.064 2.2E-06 54.0 5.5 37 57-93 187-223 (478)
312 3gg2_A Sugar dehydrogenase, UD 93.7 0.053 1.8E-06 53.8 4.7 33 58-90 3-35 (450)
313 2hjr_A Malate dehydrogenase; m 93.7 0.072 2.5E-06 50.5 5.4 34 57-90 14-48 (328)
314 4a7p_A UDP-glucose dehydrogena 93.7 0.069 2.4E-06 52.8 5.4 36 56-91 7-42 (446)
315 4b1b_A TRXR, thioredoxin reduc 93.6 0.063 2.2E-06 54.7 5.2 35 58-92 224-258 (542)
316 3ghy_A Ketopantoate reductase 93.6 0.07 2.4E-06 50.8 5.2 33 57-89 3-35 (335)
317 2gv8_A Monooxygenase; FMO, FAD 93.6 0.058 2E-06 53.8 4.9 36 56-91 211-247 (447)
318 2ew2_A 2-dehydropantoate 2-red 93.5 0.061 2.1E-06 50.7 4.7 32 58-89 4-35 (316)
319 3hwr_A 2-dehydropantoate 2-red 93.4 0.067 2.3E-06 50.6 4.8 33 56-89 18-50 (318)
320 1zcj_A Peroxisomal bifunctiona 93.4 0.081 2.8E-06 52.8 5.5 34 57-90 37-70 (463)
321 3g17_A Similar to 2-dehydropan 93.4 0.06 2E-06 50.3 4.3 33 58-90 3-35 (294)
322 2wpf_A Trypanothione reductase 93.3 0.075 2.6E-06 53.7 5.3 37 57-93 191-230 (495)
323 2vdc_G Glutamate synthase [NAD 93.2 0.098 3.4E-06 52.2 5.8 44 473-518 406-449 (456)
324 1fec_A Trypanothione reductase 93.2 0.082 2.8E-06 53.4 5.3 37 57-93 187-226 (490)
325 3itj_A Thioredoxin reductase 1 93.2 0.074 2.5E-06 50.5 4.8 36 56-91 172-207 (338)
326 3dtt_A NADP oxidoreductase; st 93.2 0.09 3.1E-06 47.5 5.0 35 56-90 18-52 (245)
327 3g0o_A 3-hydroxyisobutyrate de 93.1 0.085 2.9E-06 49.4 4.9 35 56-90 6-40 (303)
328 2ewd_A Lactate dehydrogenase,; 93.0 0.087 3E-06 49.7 4.9 34 57-90 4-38 (317)
329 3pef_A 6-phosphogluconate dehy 93.0 0.099 3.4E-06 48.5 5.2 33 58-90 2-34 (287)
330 2v6b_A L-LDH, L-lactate dehydr 93.0 0.095 3.3E-06 49.1 5.0 33 58-90 1-35 (304)
331 1mo9_A ORF3; nucleotide bindin 93.0 0.09 3.1E-06 53.6 5.3 36 58-93 215-250 (523)
332 1z82_A Glycerol-3-phosphate de 93.0 0.097 3.3E-06 49.9 5.2 34 56-89 13-46 (335)
333 1t2d_A LDH-P, L-lactate dehydr 93.0 0.11 3.7E-06 49.1 5.5 34 57-90 4-38 (322)
334 1mv8_A GMD, GDP-mannose 6-dehy 92.9 0.073 2.5E-06 52.8 4.4 33 58-90 1-33 (436)
335 3ics_A Coenzyme A-disulfide re 92.9 0.1 3.5E-06 54.0 5.6 37 57-93 187-223 (588)
336 3pid_A UDP-glucose 6-dehydroge 92.9 0.086 2.9E-06 51.7 4.7 34 56-90 35-68 (432)
337 3l9w_A Glutathione-regulated p 92.9 0.095 3.3E-06 51.3 5.0 36 56-91 3-38 (413)
338 2vns_A Metalloreductase steap3 92.9 0.12 4E-06 45.7 5.2 35 56-90 27-61 (215)
339 4g65_A TRK system potassium up 92.8 0.043 1.5E-06 54.8 2.5 36 56-91 2-37 (461)
340 3mog_A Probable 3-hydroxybutyr 92.7 0.1 3.4E-06 52.3 5.1 34 57-90 5-38 (483)
341 4dll_A 2-hydroxy-3-oxopropiona 92.7 0.11 3.6E-06 49.2 5.0 36 55-90 29-64 (320)
342 1xdi_A RV3303C-LPDA; reductase 92.7 0.11 3.7E-06 52.7 5.3 37 57-93 182-218 (499)
343 3ego_A Probable 2-dehydropanto 92.7 0.099 3.4E-06 49.1 4.7 33 57-90 2-34 (307)
344 1x13_A NAD(P) transhydrogenase 92.7 0.12 4.1E-06 50.4 5.4 34 57-90 172-205 (401)
345 1bg6_A N-(1-D-carboxylethyl)-L 92.6 0.11 3.8E-06 49.9 5.2 32 58-89 5-36 (359)
346 1hyu_A AHPF, alkyl hydroperoxi 92.6 0.084 2.9E-06 53.7 4.4 36 56-91 354-389 (521)
347 3oj0_A Glutr, glutamyl-tRNA re 92.5 0.054 1.8E-06 44.4 2.3 34 57-90 21-54 (144)
348 1nyt_A Shikimate 5-dehydrogena 92.4 0.14 4.8E-06 47.0 5.3 34 56-89 118-151 (271)
349 1guz_A Malate dehydrogenase; o 92.3 0.14 4.7E-06 48.2 5.1 33 58-90 1-35 (310)
350 1txg_A Glycerol-3-phosphate de 92.3 0.094 3.2E-06 49.9 4.1 31 58-88 1-31 (335)
351 3qha_A Putative oxidoreductase 92.3 0.1 3.5E-06 48.7 4.2 35 57-91 15-49 (296)
352 3iwa_A FAD-dependent pyridine 92.2 0.13 4.4E-06 51.7 5.1 37 57-93 159-196 (472)
353 3phh_A Shikimate dehydrogenase 92.2 0.16 5.6E-06 46.3 5.3 33 57-89 118-150 (269)
354 3r9u_A Thioredoxin reductase; 92.2 0.14 4.8E-06 47.9 5.2 35 57-91 147-181 (315)
355 2h78_A Hibadh, 3-hydroxyisobut 92.2 0.13 4.4E-06 48.1 4.8 34 57-90 3-36 (302)
356 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.15 5.1E-06 44.8 5.0 32 58-89 1-33 (212)
357 3pdu_A 3-hydroxyisobutyrate de 92.1 0.11 3.8E-06 48.2 4.3 33 58-90 2-34 (287)
358 3tl2_A Malate dehydrogenase; c 92.1 0.16 5.3E-06 47.7 5.2 33 57-89 8-41 (315)
359 3gvi_A Malate dehydrogenase; N 92.1 0.17 5.9E-06 47.6 5.5 34 57-90 7-41 (324)
360 1dlj_A UDP-glucose dehydrogena 92.1 0.094 3.2E-06 51.3 3.8 32 58-90 1-32 (402)
361 1jw9_B Molybdopterin biosynthe 92.1 0.13 4.4E-06 46.6 4.4 34 57-90 31-65 (249)
362 1l7d_A Nicotinamide nucleotide 92.0 0.16 5.5E-06 49.3 5.4 35 56-90 171-205 (384)
363 3dgh_A TRXR-1, thioredoxin red 92.0 0.17 5.8E-06 50.9 5.8 33 57-89 187-219 (483)
364 1ur5_A Malate dehydrogenase; o 92.0 0.16 5.6E-06 47.5 5.3 32 58-89 3-35 (309)
365 1pjc_A Protein (L-alanine dehy 92.0 0.17 5.8E-06 48.7 5.5 33 58-90 168-200 (361)
366 1cjc_A Protein (adrenodoxin re 91.9 0.15 5.2E-06 50.9 5.2 36 56-91 144-200 (460)
367 4ffl_A PYLC; amino acid, biosy 91.9 0.17 5.7E-06 48.8 5.4 35 57-91 1-35 (363)
368 4dna_A Probable glutathione re 91.8 0.17 5.8E-06 50.6 5.5 36 57-92 170-205 (463)
369 3o0h_A Glutathione reductase; 91.7 0.17 5.9E-06 50.9 5.5 37 57-93 191-227 (484)
370 3dfu_A Uncharacterized protein 91.7 0.063 2.1E-06 47.7 1.9 35 55-89 4-38 (232)
371 4e21_A 6-phosphogluconate dehy 91.7 0.18 6E-06 48.4 5.2 35 56-90 21-55 (358)
372 1p77_A Shikimate 5-dehydrogena 91.7 0.14 4.9E-06 47.0 4.4 34 56-89 118-151 (272)
373 2wtb_A MFP2, fatty acid multif 91.7 0.17 5.8E-06 53.5 5.5 34 57-90 312-345 (725)
374 3ldh_A Lactate dehydrogenase; 91.7 0.22 7.6E-06 46.8 5.7 34 56-89 20-55 (330)
375 3l6d_A Putative oxidoreductase 91.6 0.21 7.2E-06 46.8 5.6 35 56-90 8-42 (306)
376 4ezb_A Uncharacterized conserv 91.6 0.17 5.8E-06 47.7 4.9 34 57-90 24-58 (317)
377 2uyy_A N-PAC protein; long-cha 91.6 0.23 8E-06 46.7 5.9 34 57-90 30-63 (316)
378 2qrj_A Saccharopine dehydrogen 91.6 0.17 5.8E-06 48.6 4.8 40 56-95 213-257 (394)
379 1y6j_A L-lactate dehydrogenase 91.5 0.18 6.2E-06 47.4 5.0 34 56-89 6-41 (318)
380 2qyt_A 2-dehydropantoate 2-red 91.5 0.11 3.8E-06 48.9 3.6 32 57-88 8-45 (317)
381 1a5z_A L-lactate dehydrogenase 91.5 0.15 5.2E-06 48.1 4.5 32 58-89 1-34 (319)
382 3qsg_A NAD-binding phosphogluc 91.5 0.15 5.2E-06 47.9 4.4 35 55-89 22-57 (312)
383 2egg_A AROE, shikimate 5-dehyd 91.5 0.19 6.6E-06 46.8 5.1 34 56-89 140-174 (297)
384 4huj_A Uncharacterized protein 91.4 0.11 3.8E-06 46.0 3.3 33 57-89 23-56 (220)
385 2i6t_A Ubiquitin-conjugating e 91.3 0.17 5.9E-06 47.1 4.6 35 56-90 13-49 (303)
386 1oju_A MDH, malate dehydrogena 91.3 0.15 5.2E-06 47.3 4.2 33 58-90 1-35 (294)
387 2eez_A Alanine dehydrogenase; 91.3 0.22 7.6E-06 48.0 5.5 34 57-90 166-199 (369)
388 1pjq_A CYSG, siroheme synthase 91.2 0.19 6.4E-06 50.0 4.9 34 56-89 11-44 (457)
389 3p7m_A Malate dehydrogenase; p 91.1 0.25 8.5E-06 46.5 5.5 34 57-90 5-39 (321)
390 3lzw_A Ferredoxin--NADP reduct 91.1 0.16 5.6E-06 47.9 4.4 35 57-91 154-188 (332)
391 2o3j_A UDP-glucose 6-dehydroge 91.0 0.18 6.1E-06 50.6 4.7 34 57-90 9-44 (481)
392 3pqe_A L-LDH, L-lactate dehydr 91.0 0.22 7.5E-06 46.9 5.0 34 56-89 4-39 (326)
393 3zwc_A Peroxisomal bifunctiona 91.0 0.26 9E-06 51.9 6.0 35 56-90 315-349 (742)
394 1evy_A Glycerol-3-phosphate de 90.9 0.16 5.4E-06 49.0 4.0 31 59-89 17-47 (366)
395 1hyh_A L-hicdh, L-2-hydroxyiso 90.9 0.19 6.4E-06 47.2 4.4 33 58-90 2-36 (309)
396 3ew7_A LMO0794 protein; Q8Y8U8 90.8 0.27 9.3E-06 43.2 5.3 32 58-89 1-33 (221)
397 2f1k_A Prephenate dehydrogenas 90.8 0.24 8.1E-06 45.7 5.0 32 58-89 1-32 (279)
398 3c24_A Putative oxidoreductase 90.8 0.31 1.1E-05 45.1 5.8 34 57-90 11-45 (286)
399 2pv7_A T-protein [includes: ch 90.7 0.27 9.1E-06 45.9 5.3 34 57-90 21-55 (298)
400 4aj2_A L-lactate dehydrogenase 90.7 0.31 1.1E-05 46.0 5.7 35 55-89 17-53 (331)
401 1yqg_A Pyrroline-5-carboxylate 90.7 0.21 7.2E-06 45.6 4.5 32 58-89 1-33 (263)
402 3gpi_A NAD-dependent epimerase 90.6 0.3 1E-05 45.1 5.6 34 57-90 3-36 (286)
403 3ggo_A Prephenate dehydrogenas 90.6 0.29 9.8E-06 46.0 5.4 35 56-90 32-68 (314)
404 1edz_A 5,10-methylenetetrahydr 90.6 0.23 7.9E-06 46.3 4.7 34 56-89 176-210 (320)
405 1wdk_A Fatty oxidation complex 90.6 0.21 7.1E-06 52.8 4.8 35 56-90 313-347 (715)
406 3nep_X Malate dehydrogenase; h 90.5 0.23 7.7E-06 46.6 4.6 33 58-90 1-35 (314)
407 2q3e_A UDP-glucose 6-dehydroge 90.5 0.21 7.1E-06 49.9 4.6 34 57-90 5-40 (467)
408 2vhw_A Alanine dehydrogenase; 90.5 0.29 9.9E-06 47.3 5.5 35 56-90 167-201 (377)
409 4gwg_A 6-phosphogluconate dehy 90.5 0.26 8.7E-06 49.2 5.1 35 56-90 3-37 (484)
410 3don_A Shikimate dehydrogenase 90.5 0.24 8.1E-06 45.5 4.5 35 56-90 116-151 (277)
411 3ius_A Uncharacterized conserv 90.4 0.24 8.1E-06 45.8 4.7 34 57-90 5-38 (286)
412 3h2s_A Putative NADH-flavin re 90.4 0.3 1E-05 43.1 5.2 32 58-89 1-33 (224)
413 2gf2_A Hibadh, 3-hydroxyisobut 90.4 0.25 8.6E-06 45.9 4.8 32 59-90 2-33 (296)
414 4a9w_A Monooxygenase; baeyer-v 90.3 0.22 7.4E-06 47.5 4.4 33 56-89 162-194 (357)
415 3ojo_A CAP5O; rossmann fold, c 90.3 0.21 7E-06 49.1 4.2 34 57-90 11-44 (431)
416 3fbt_A Chorismate mutase and s 90.3 0.3 1E-05 44.9 5.0 35 56-90 121-156 (282)
417 3u62_A Shikimate dehydrogenase 90.2 0.33 1.1E-05 43.9 5.2 34 56-90 108-142 (253)
418 3ktd_A Prephenate dehydrogenas 90.2 0.29 1E-05 46.4 5.1 35 56-90 7-41 (341)
419 3tnl_A Shikimate dehydrogenase 90.2 0.33 1.1E-05 45.4 5.4 34 56-89 153-187 (315)
420 1m6i_A Programmed cell death p 90.2 0.24 8.2E-06 49.9 4.8 36 57-92 180-219 (493)
421 2dvm_A Malic enzyme, 439AA lon 90.1 0.29 9.9E-06 47.9 5.1 32 56-87 185-219 (439)
422 1vpd_A Tartronate semialdehyde 90.1 0.26 8.8E-06 46.0 4.6 33 58-90 6-38 (299)
423 2hk9_A Shikimate dehydrogenase 90.0 0.25 8.6E-06 45.4 4.4 34 56-89 128-161 (275)
424 3pwz_A Shikimate dehydrogenase 90.0 0.34 1.2E-05 44.3 5.2 34 56-89 119-153 (272)
425 3cky_A 2-hydroxymethyl glutara 90.0 0.28 9.6E-06 45.7 4.8 33 57-89 4-36 (301)
426 2zyd_A 6-phosphogluconate dehy 90.0 0.25 8.7E-06 49.4 4.7 35 56-90 14-48 (480)
427 2aef_A Calcium-gated potassium 90.0 0.14 4.8E-06 45.8 2.6 35 56-91 8-42 (234)
428 3jyo_A Quinate/shikimate dehyd 90.0 0.35 1.2E-05 44.5 5.3 34 56-89 126-160 (283)
429 1gte_A Dihydropyrimidine dehyd 89.9 0.26 8.8E-06 54.6 5.1 33 58-90 333-366 (1025)
430 2p4q_A 6-phosphogluconate dehy 89.9 0.32 1.1E-05 48.9 5.3 35 56-90 9-43 (497)
431 1yj8_A Glycerol-3-phosphate de 89.8 0.2 6.9E-06 48.5 3.7 34 58-91 22-62 (375)
432 3o8q_A Shikimate 5-dehydrogena 89.7 0.37 1.3E-05 44.3 5.2 34 56-89 125-159 (281)
433 2rir_A Dipicolinate synthase, 89.7 0.38 1.3E-05 44.9 5.4 35 56-90 156-190 (300)
434 2izz_A Pyrroline-5-carboxylate 89.7 0.32 1.1E-05 45.9 4.9 34 56-89 21-58 (322)
435 3rui_A Ubiquitin-like modifier 89.7 0.37 1.2E-05 45.4 5.2 35 56-90 33-68 (340)
436 2g5c_A Prephenate dehydrogenas 89.6 0.36 1.2E-05 44.5 5.2 32 58-89 2-35 (281)
437 1lqt_A FPRA; NADP+ derivative, 89.6 0.32 1.1E-05 48.4 5.1 36 56-91 146-202 (456)
438 3h8v_A Ubiquitin-like modifier 89.6 0.26 9.1E-06 45.4 4.1 35 56-90 35-70 (292)
439 1zud_1 Adenylyltransferase THI 89.5 0.34 1.2E-05 43.8 4.8 35 56-90 27-62 (251)
440 3d4o_A Dipicolinate synthase s 89.5 0.41 1.4E-05 44.5 5.4 35 56-90 154-188 (293)
441 3vku_A L-LDH, L-lactate dehydr 89.5 0.35 1.2E-05 45.5 4.9 34 56-89 8-43 (326)
442 1kdg_A CDH, cellobiose dehydro 89.4 0.42 1.4E-05 48.9 5.9 37 55-91 5-41 (546)
443 3nv9_A Malic enzyme; rossmann 89.4 0.33 1.1E-05 47.1 4.6 36 56-91 218-256 (487)
444 2pgd_A 6-phosphogluconate dehy 89.4 0.33 1.1E-05 48.7 5.0 33 58-90 3-35 (482)
445 1nvt_A Shikimate 5'-dehydrogen 89.4 0.28 9.7E-06 45.4 4.2 33 56-89 127-159 (287)
446 2ahr_A Putative pyrroline carb 89.4 0.31 1.1E-05 44.3 4.5 33 57-89 3-35 (259)
447 1x0v_A GPD-C, GPDH-C, glycerol 89.4 0.19 6.5E-06 48.2 3.1 34 58-91 9-49 (354)
448 3gt0_A Pyrroline-5-carboxylate 89.4 0.36 1.2E-05 43.5 4.8 33 58-90 3-39 (247)
449 2cvz_A Dehydrogenase, 3-hydrox 89.3 0.3 1E-05 45.2 4.4 31 58-89 2-32 (289)
450 3fi9_A Malate dehydrogenase; s 89.3 0.41 1.4E-05 45.4 5.2 34 56-89 7-43 (343)
451 3t4e_A Quinate/shikimate dehyd 89.3 0.45 1.5E-05 44.4 5.4 34 56-89 147-181 (312)
452 2rcy_A Pyrroline carboxylate r 89.2 0.31 1.1E-05 44.4 4.4 34 58-91 5-42 (262)
453 1hdo_A Biliverdin IX beta redu 89.2 0.44 1.5E-05 41.2 5.2 33 58-90 4-37 (206)
454 1w4x_A Phenylacetone monooxyge 89.2 0.3 1E-05 49.9 4.6 35 56-90 185-219 (542)
455 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.1 0.33 1.1E-05 48.6 4.8 33 58-90 2-34 (478)
456 3c7a_A Octopine dehydrogenase; 89.0 0.19 6.7E-06 49.1 2.9 30 58-87 3-33 (404)
457 3ond_A Adenosylhomocysteinase; 89.0 0.39 1.3E-05 47.5 5.0 35 56-90 264-298 (488)
458 4g6h_A Rotenone-insensitive NA 88.9 0.27 9.1E-06 49.7 3.9 37 58-94 218-268 (502)
459 3k30_A Histamine dehydrogenase 88.9 0.42 1.4E-05 50.4 5.6 39 55-93 521-561 (690)
460 1yb4_A Tartronic semialdehyde 88.8 0.26 8.8E-06 45.8 3.6 32 58-90 4-35 (295)
461 3c4a_A Probable tryptophan hyd 88.8 2.8 9.6E-05 40.3 11.2 51 272-335 98-148 (381)
462 4id9_A Short-chain dehydrogena 88.8 0.43 1.5E-05 45.4 5.2 37 55-91 17-54 (347)
463 1ldn_A L-lactate dehydrogenase 88.7 0.44 1.5E-05 44.8 5.1 34 56-89 5-40 (316)
464 1i36_A Conserved hypothetical 88.7 0.35 1.2E-05 44.1 4.4 31 58-88 1-31 (264)
465 3tri_A Pyrroline-5-carboxylate 88.7 0.5 1.7E-05 43.5 5.4 34 57-90 3-39 (280)
466 1mld_A Malate dehydrogenase; o 88.6 0.4 1.4E-05 45.0 4.6 33 58-90 1-36 (314)
467 3d1l_A Putative NADP oxidoredu 88.6 0.34 1.2E-05 44.3 4.1 34 57-90 10-44 (266)
468 4gbj_A 6-phosphogluconate dehy 88.5 0.33 1.1E-05 45.2 4.0 33 58-90 6-38 (297)
469 1npy_A Hypothetical shikimate 88.5 0.46 1.6E-05 43.5 4.9 33 57-89 119-152 (271)
470 4b4o_A Epimerase family protei 88.5 0.55 1.9E-05 43.6 5.6 33 58-90 1-34 (298)
471 2d5c_A AROE, shikimate 5-dehyd 88.5 0.46 1.6E-05 43.3 4.9 31 59-89 118-148 (263)
472 2x0j_A Malate dehydrogenase; o 88.4 0.38 1.3E-05 44.5 4.3 33 58-90 1-35 (294)
473 2zqz_A L-LDH, L-lactate dehydr 88.3 0.46 1.6E-05 44.8 4.9 35 55-89 7-43 (326)
474 3d0o_A L-LDH 1, L-lactate dehy 88.2 0.44 1.5E-05 44.8 4.7 33 57-89 6-40 (317)
475 4hv4_A UDP-N-acetylmuramate--L 88.1 0.36 1.2E-05 48.6 4.2 35 56-90 21-56 (494)
476 3dhn_A NAD-dependent epimerase 88.1 0.45 1.5E-05 42.0 4.5 34 57-90 4-38 (227)
477 1lu9_A Methylene tetrahydromet 88.1 0.59 2E-05 43.2 5.5 34 56-89 118-152 (287)
478 1a4i_A Methylenetetrahydrofola 87.9 0.54 1.8E-05 43.2 4.9 34 56-89 164-198 (301)
479 1leh_A Leucine dehydrogenase; 87.9 0.57 2E-05 44.7 5.3 34 56-89 172-205 (364)
480 1np3_A Ketol-acid reductoisome 87.8 0.55 1.9E-05 44.6 5.2 34 57-90 16-49 (338)
481 2pzm_A Putative nucleotide sug 87.7 0.62 2.1E-05 44.0 5.5 35 56-90 19-54 (330)
482 1ez4_A Lactate dehydrogenase; 87.5 0.47 1.6E-05 44.6 4.4 34 56-89 4-39 (318)
483 4a26_A Putative C-1-tetrahydro 87.5 0.62 2.1E-05 42.8 5.1 34 56-89 164-198 (300)
484 3h5n_A MCCB protein; ubiquitin 87.4 0.52 1.8E-05 45.0 4.7 34 56-89 117-151 (353)
485 3vps_A TUNA, NAD-dependent epi 87.3 0.67 2.3E-05 43.3 5.5 36 56-91 6-42 (321)
486 3ngx_A Bifunctional protein fo 87.2 0.64 2.2E-05 42.1 4.9 34 56-89 149-183 (276)
487 3fpz_A Thiazole biosynthetic e 87.2 0.38 1.3E-05 45.5 3.6 41 473-513 280-325 (326)
488 1smk_A Malate dehydrogenase, g 87.2 0.44 1.5E-05 45.0 4.0 35 56-90 7-44 (326)
489 2iz1_A 6-phosphogluconate dehy 87.1 0.54 1.9E-05 47.0 4.9 33 58-90 6-38 (474)
490 1y1p_A ARII, aldehyde reductas 87.1 0.97 3.3E-05 42.7 6.5 35 55-89 9-44 (342)
491 2d4a_B Malate dehydrogenase; a 87.0 0.52 1.8E-05 44.0 4.4 31 59-89 1-32 (308)
492 3r6d_A NAD-dependent epimerase 87.0 0.82 2.8E-05 40.2 5.6 33 58-90 6-40 (221)
493 3dqp_A Oxidoreductase YLBE; al 86.9 0.58 2E-05 41.1 4.5 33 58-90 1-34 (219)
494 1b0a_A Protein (fold bifunctio 86.8 0.67 2.3E-05 42.3 4.8 34 56-89 158-192 (288)
495 3gvp_A Adenosylhomocysteinase 86.6 0.68 2.3E-05 45.0 5.0 35 56-90 219-253 (435)
496 1gpj_A Glutamyl-tRNA reductase 86.5 0.6 2.1E-05 45.6 4.7 35 56-90 166-201 (404)
497 3vh1_A Ubiquitin-like modifier 86.3 0.67 2.3E-05 47.0 5.0 35 56-90 326-361 (598)
498 4gsl_A Ubiquitin-like modifier 86.3 0.72 2.5E-05 46.9 5.2 36 56-91 325-361 (615)
499 2dbq_A Glyoxylate reductase; D 86.2 0.83 2.8E-05 43.2 5.4 35 56-90 149-183 (334)
500 2yjz_A Metalloreductase steap4 86.3 0.14 4.8E-06 44.6 0.0 35 56-90 18-52 (201)
No 1
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=8.1e-40 Score=339.25 Aligned_cols=432 Identities=18% Similarity=0.208 Sum_probs=284.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (530)
.++||||||||++||+||+.|++.|++|+|||+++++||++.+.....|+.+|.|++++.+.+..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 45799999999999999999999999999999999999999987643589999999999877777899999999875432
Q ss_pred eeccceeeecCCCCCCcccccCCCCCCCch-----hhHHHHHhcccCCChHHHHHhhhhhhhh-hhcCcccccccCcccH
Q 009635 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPL-----NGILAILRNNEMLTWPEKVKFAIGLLPA-IIGGQAYVEAQDGLTV 209 (530)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~ 209 (530)
+.....++.. ++.. +.+...+|... ..+..++. .+......... ...........++.++
T Consensus 83 ~~~~~~~~~~---~g~~--~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (520)
T 1s3e_A 83 NEVERLIHHV---KGKS--YPFRGPFPPVWNPITYLDHNNFWR---------TMDDMGREIPSDAPWKAPLAEEWDNMTM 148 (520)
T ss_dssp CCSSEEEEEE---TTEE--EEECSSSCCCCSHHHHHHHHHHHH---------HHHHHHTTSCTTCGGGSTTHHHHHTSBH
T ss_pred ccCCceEEEE---CCEE--EEecCCCCCCCCHHHHHHHHHHHH---------HHHHHHhhcCcCCCccccchhhhhccCH
Confidence 2222222211 1111 11122222210 01111111 00000000000 0000001112456899
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHH------HhhccCCeEEeecCCCCccchHHHHHHHH
Q 009635 210 QEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQ 283 (530)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~gg~~~~l~~~l~~~l~ 283 (530)
.+|+++....+. .+.++..+....++.++++++.......+... +....+....++.|| ...++++|++.+
T Consensus 149 ~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l- 225 (520)
T 1s3e_A 149 KELLDKLCWTES-AKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQVSERIMDLL- 225 (520)
T ss_dssp HHHHHHHCSSHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THHHHHHHHHHH-
T ss_pred HHHHHhhCCCHH-HHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC-HHHHHHHHHHHc-
Confidence 999999876654 46778887777788899999987665433211 111123334556666 688888888765
Q ss_pred HcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEe
Q 009635 284 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWF 363 (530)
Q Consensus 284 ~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~ 363 (530)
|++|++|++|++|..++ +.+ .|++.+|+++.||+||+|+|++.+.+++.++..+..+.++++++.+.++.|+++.|
T Consensus 226 --g~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~ 301 (520)
T 1s3e_A 226 --GDRVKLERPVIYIDQTR-ENV-LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYY 301 (520)
T ss_dssp --GGGEESSCCEEEEECSS-SSE-EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEEC
T ss_pred --CCcEEcCCeeEEEEECC-CeE-EEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEe
Confidence 68999999999998754 444 48889998999999999999999888864444455667888899999999999999
Q ss_pred ccccccccC--cccc--ccCCcceeeeccCcccccccCCCccEEEEEeeC--ccccCCCChhHHHHHHHHHHHHhCCCCc
Q 009635 364 DRKLKNTYD--HLLF--SRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEI 437 (530)
Q Consensus 364 ~~~~~~~~~--~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~e~~~~~~~~~l~~~~p~~~ 437 (530)
+++||+..+ ...+ +........++.+ ..+++..++..+... +..|..+++|++++.++++|++++|...
T Consensus 302 ~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~-----~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~ 376 (520)
T 1s3e_A 302 KEPFWRKKDYCGTMIIDGEEAPVAYTLDDT-----KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLE 376 (520)
T ss_dssp SSCGGGGGTEEEEEEECSTTCSCSEEEECC-----CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGG
T ss_pred CCCcccCCCCCceeeccCCCCceEEEeeCC-----CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCccc
Confidence 999996432 2212 1111122222221 112233455444433 3678888999999999999999998631
Q ss_pred ccccccceEEEEEEeecCCc--eee--cCCCC-CCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhh
Q 009635 438 SADQSKAKIVKYHVVKTPRS--VYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 512 (530)
Q Consensus 438 ~~~~~~~~~~~~~~~~~p~~--~~~--~~~~~-~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~ 512 (530)
...+ ..+...+|...|+. .|. +.++. ....+.+++|++||||||++++..|+|+++||+.||++||++|++.+
T Consensus 377 ~~~p--~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l 454 (520)
T 1s3e_A 377 ALEP--VHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAM 454 (520)
T ss_dssp GGCC--SEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCc--cEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHH
Confidence 1111 22344445444543 232 22331 12234567889999999999987778899999999999999999998
Q ss_pred hhH
Q 009635 513 VLL 515 (530)
Q Consensus 513 ~~~ 515 (530)
+..
T Consensus 455 ~~~ 457 (520)
T 1s3e_A 455 GKI 457 (520)
T ss_dssp TSS
T ss_pred hcC
Confidence 754
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.8e-38 Score=321.37 Aligned_cols=417 Identities=18% Similarity=0.261 Sum_probs=288.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceec--CCcchHHHHHHHcCCCCCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFF--GAYPNIQNLFGELGINDRLQ 135 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~--~~~~~~~~l~~~lg~~~~~~ 135 (530)
+||+|||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|++.+. .....+.++++++|+...+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 5999999999999999999999999999999999999999875 57999999986553 33456889999999876544
Q ss_pred eeccceeee-cCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHHH
Q 009635 136 WKEHSMIFA-MPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (530)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (530)
......... .......+. ... ....... ....+.+.++.+....+..... ...+..++.+|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~~l~ 143 (425)
T 3ka7_A 80 RSEMTTVRVPLKKGNPDYV---KGF-KDISFND------FPSLLSYKDRMKIALLIVSTRK------NRPSGSSLQAWIK 143 (425)
T ss_dssp ECCCCEEEEESSTTCCSST---TCE-EEEEGGG------GGGGSCHHHHHHHHHHHHHTTT------SCCCSSBHHHHHH
T ss_pred ecCCceEEeecCCCccccc---ccc-cceehhh------hhhhCCHHHHHHHHHHHHhhhh------cCCCCCCHHHHHH
Confidence 332111111 111100000 000 0000000 0112233333332222211100 1224579999999
Q ss_pred HcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccchHHHHHHHHHcCcEEEecce
Q 009635 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSR 294 (530)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~ 294 (530)
+. +..+..+.++.++....++.++++++.......+..+.. .+. ..++.|| +..++++|.+.++++|++|+++++
T Consensus 144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~ 218 (425)
T 3ka7_A 144 SQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISANGGKIHTGQE 218 (425)
T ss_dssp HH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHHTTCEEECSCC
T ss_pred Hh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHHcCCEEEECCc
Confidence 87 455667778888877777889999998766655544321 222 3466776 789999999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccc-c--ccHHHHHHhccCCccEEEEEEEecccccccc
Q 009635 295 VQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW-K--EMAYFKRLEKLVGVPVINIHIWFDRKLKNTY 371 (530)
Q Consensus 295 V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~-~--~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~ 371 (530)
|++|..+ ++++++|++. |++++||+||+|+|++.+.+|+++.. . +..+.++++++.+.+..++++.|+++.+.+.
T Consensus 219 V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~ 296 (425)
T 3ka7_A 219 VSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHT 296 (425)
T ss_dssp EEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCSS
T ss_pred eeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCcC
Confidence 9999984 5666678775 76899999999999999999987532 2 4567788888888888999999999876543
Q ss_pred CccccccCC-cceeeeccCcccccccCCCccEEEEEeeCccccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEE
Q 009635 372 DHLLFSRSS-LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYH 450 (530)
Q Consensus 372 ~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ 450 (530)
.++++.+. ....+...|..+++++|+|++++.+......++... .++.++.++++|++++|+ ... .+. .
T Consensus 297 -~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~-~~~-----~~~--~ 366 (425)
T 3ka7_A 297 -GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPG-KRY-----EVL--L 366 (425)
T ss_dssp -SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTT-CCE-----EEE--E
T ss_pred -EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCC-Cce-----EEE--E
Confidence 33343322 122234566778899999998886644322222122 245679999999999987 221 122 4
Q ss_pred EeecCCceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHH
Q 009635 451 VVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 509 (530)
Q Consensus 451 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl 509 (530)
...|+.+.+.+.++.. .++..++|++|||+|||++.+.+..+|++|+.||++||++|+
T Consensus 367 v~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 367 IQSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EEEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred EEEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 5577777777666643 456678899999999999998655799999999999999986
No 3
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=2.2e-39 Score=334.38 Aligned_cols=432 Identities=15% Similarity=0.111 Sum_probs=281.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCcce
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~~ 136 (530)
.+||+|||||++||+||+.|++.|++|+|||+++++||++.+.. .+|+.+|.|++++.+.++.+.++++++|+...+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 37999999999999999999999999999999999999999876 57899999999998888889999999998654332
Q ss_pred ec----cceeeecCCCCCCcccccCCCCCCCc--hhhHH----HHHhcccCCChHHHHHhhhhhhh--hhhcCccccccc
Q 009635 137 KE----HSMIFAMPNKPGEFSRFDFPEVLPAP--LNGIL----AILRNNEMLTWPEKVKFAIGLLP--AIIGGQAYVEAQ 204 (530)
Q Consensus 137 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 204 (530)
.. ....+......+.... ++.. ...+. .++..... ....+.. ............
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 183 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTY------MTHEAEDELLRSALHKFTNVDGT--------NGRTVLPFPHDMFYVPEFRKY 183 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEE------ECHHHHHHHHHHHHHHHHCSSSS--------TTTTTCSCTTSTTSSTTHHHH
T ss_pred ccccCCCceEEEecCCCCceee------cCHHHHHHHHHHHHHHHHccchh--------hhhhcCCCCCCcccCcchhhh
Confidence 21 1111111110011110 1110 00010 11110000 0000000 000000112234
Q ss_pred CcccHHHHHHHcC--CCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhh----ccCCeEEeecCCCCccchHHH
Q 009635 205 DGLTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLPI 278 (530)
Q Consensus 205 ~~~s~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~gg~~~~l~~~l 278 (530)
++.++.+|+++.+ .+.. ...++.++....++.+++++++...+..+...... ........+.|| ...+++.|
T Consensus 184 ~~~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l 261 (495)
T 2vvm_A 184 DEMSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDG-QSAFARRF 261 (495)
T ss_dssp HTSBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTC-HHHHHHHH
T ss_pred hhhhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCC-HHHHHHHH
Confidence 5689999999876 6654 45688888888888899999987665443211000 001122334555 78999999
Q ss_pred HHHHHHcC-cEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEE
Q 009635 279 VEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (530)
Q Consensus 279 ~~~l~~~g-~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~ 357 (530)
.+.+.+.| ++|+++++|++|..++++ + .|++.+|++++||+||+|+|+..+..++..+..+..+.++++.+.+.++.
T Consensus 262 ~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~ 339 (495)
T 2vvm_A 262 WEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCT 339 (495)
T ss_dssp HHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCE
T ss_pred HHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCcee
Confidence 99999998 999999999999975444 3 58888888899999999999999888853333455667888889999999
Q ss_pred EEEEEeccccccccCccccccCCcceeeeccCcccccccCCCccEEEEEeeCccccCCCChhHHHHHHHHHHHHhCCCCc
Q 009635 358 NIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEI 437 (530)
Q Consensus 358 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~~p~~~ 437 (530)
|+++.|++++|..+..+..++.++..++.+ ...++++.++..+..+... +++++..+.++++|++++|+..
T Consensus 340 kv~l~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~vl~~~~~~~~~---~~~~e~~~~~~~~L~~~~~~~~ 410 (495)
T 2vvm_A 340 KVHAEVDNKDMRSWTGIAYPFNKLCYAIGD------GTTPAGNTHLVCFGNSANH---IQPDEDVRETLKAVGQLAPGTF 410 (495)
T ss_dssp EEEEEESCGGGGGEEEEECSSCSSCEEEEE------EECTTSCEEEEEEECSTTC---CCTTTCHHHHHHHHHTTSTTSC
T ss_pred EEEEEECCccCCCceeEecCCCCcEEEecC------CCCCCCCeEEEEEeCcccc---CCCHHHHHHHHHHHHHhcCCCC
Confidence 999999999986544433333444333311 1234455555544332221 4566677889999999987521
Q ss_pred ccccccceEEEEEEeecCCce--eec-CCCCC-CCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhh
Q 009635 438 SADQSKAKIVKYHVVKTPRSV--YKT-IPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 513 (530)
Q Consensus 438 ~~~~~~~~~~~~~~~~~p~~~--~~~-~~~~~-~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~ 513 (530)
.. ..+..++|...|++. |.+ .++.. ...+.+++|.+||||||++++..|+++||||++||++||++|++.++
T Consensus 411 ~~----~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 411 GV----KRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp CE----EEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred Cc----eEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhc
Confidence 11 223334454445533 321 23321 12334566889999999999987789999999999999999999987
Q ss_pred hHhhhcc
Q 009635 514 LLAARGK 520 (530)
Q Consensus 514 ~~~~~~~ 520 (530)
...+.+.
T Consensus 487 ~~~~~~~ 493 (495)
T 2vvm_A 487 TKREVKA 493 (495)
T ss_dssp CC-----
T ss_pred cccCCCC
Confidence 6665543
No 4
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1e-37 Score=318.42 Aligned_cols=429 Identities=15% Similarity=0.147 Sum_probs=275.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (530)
.++||+|||||++||+||+.|++.|++|+|||+++++||++.+... .|+.+|.|++++......+.++++++|+.....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQTALISLLDELGLKTFER 82 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCHHHHHHHHHTTCCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccHHHHHHHHHcCCccccc
Confidence 3579999999999999999999999999999999999999988764 788999999998877777889999999875433
Q ss_pred eeccceeeecCCCCCCcccccCCCCCC-CchhhHHHHHhcccCCChHHHHHhhhhhhh-hhhcCcccccccCcccHHHHH
Q 009635 136 WKEHSMIFAMPNKPGEFSRFDFPEVLP-APLNGILAILRNNEMLTWPEKVKFAIGLLP-AIIGGQAYVEAQDGLTVQEWM 213 (530)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~l 213 (530)
+.....++... .+.. +.+....+ ........+... ...+........ ............+..++.+|+
T Consensus 83 ~~~~~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 152 (453)
T 2yg5_A 83 YREGESVYISS--AGER--TRYTGDSFPTNETTKKEMDRL------IDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWL 152 (453)
T ss_dssp CCCSEEEEECT--TSCE--EEECSSSCSCCHHHHHHHHHH------HHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHH
T ss_pred ccCCCEEEEeC--CCce--eeccCCCCCCChhhHHHHHHH------HHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHH
Confidence 33222222211 1111 11112121 111111111100 000000000000 000000111223568999999
Q ss_pred HHcCCCHHHHHHHHHHHHhhcccCCCC-cccHHHHHHHHHHH------HhhccCCeEEeecCCCCccchHHHHHHHHHcC
Q 009635 214 RKQGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQSLG 286 (530)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~g 286 (530)
++.+..+. ...++..+....++.+++ +++....+..+... +. ..+....++.|| +..+++.|++.+ |
T Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG-~~~l~~~l~~~l---g 226 (453)
T 2yg5_A 153 INQSDDAE-ARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGG-MQQVSIRMAEAL---G 226 (453)
T ss_dssp HHHCSCHH-HHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTC-THHHHHHHHHHH---G
T ss_pred HhhcCCHH-HHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCC-hHHHHHHHHHhc---C
Confidence 99876654 455777777777778888 88887655433221 00 011223456666 688888888765 6
Q ss_pred cEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEeccc
Q 009635 287 GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 366 (530)
Q Consensus 287 ~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~ 366 (530)
++|++|++|++|..++++.+ .|++ +|+++.||+||+|+|++.+..++..+..+..+.++++++.+.++.|+++.|+++
T Consensus 227 ~~i~~~~~V~~i~~~~~~~v-~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~ 304 (453)
T 2yg5_A 227 DDVFLNAPVRTVKWNESGAT-VLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETP 304 (453)
T ss_dssp GGEECSCCEEEEEEETTEEE-EEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSC
T ss_pred CcEEcCCceEEEEEeCCceE-EEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCC
Confidence 89999999999997543313 4666 677899999999999999888875444455667788888888999999999999
Q ss_pred cccccC--ccccc-cCCcceeeeccCcccccccCCC-ccEEEEEeeC--ccccCCCChhHHHHHHHHHHHHhCCCCcccc
Q 009635 367 LKNTYD--HLLFS-RSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISAD 440 (530)
Q Consensus 367 ~~~~~~--~~~~~-~~~~~~~~~~~s~~~~~~~~~~-~~v~~~~~~~--~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~ 440 (530)
||+..+ ...+. +.+.. ..++.+ .+++ ..++..+..+ ...|..+++|++++.++++|++++|.....
T Consensus 305 ~w~~~~~~g~~~~~~~~~~-~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~- 376 (453)
T 2yg5_A 305 FWREDGLSGTGFGASEVVQ-EVYDNT------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAEE- 376 (453)
T ss_dssp GGGGGTEEEEEECTTSSSC-EEEECC------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGGC-
T ss_pred CCCCCCCCceeecCCCCeE-EEEeCC------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCCC-
Confidence 986432 22222 22222 222222 2233 3444443332 356777889999999999999999852211
Q ss_pred cccceEEEEEEeecCCc--eee--cCCC-CCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhh
Q 009635 441 QSKAKIVKYHVVKTPRS--VYK--TIPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 513 (530)
Q Consensus 441 ~~~~~~~~~~~~~~p~~--~~~--~~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~ 513 (530)
+ ..+..++|...|+. .|. +.++ .....+.+++|++||||||++++..++|+++||+.||++||++|++.++
T Consensus 377 p--~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 377 P--VVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp C--SEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred c--cEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 1 12222334333432 221 2333 1112345678899999999999877788999999999999999998763
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=7.4e-38 Score=321.27 Aligned_cols=422 Identities=18% Similarity=0.244 Sum_probs=278.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC------CcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAG------HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G------~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~ 130 (530)
++||+|||||++||+||++|+++| ++|+|||+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 579999999999999999999999 99999999999999999876 47999999999998888889999999999
Q ss_pred CCCcceeccceeeecCCCCCCcccccCCC--CCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCccc
Q 009635 131 NDRLQWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 208 (530)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 208 (530)
+...........+.. ..+....+.... ..|.. +..++. ...+...++.+....... ......++.+
T Consensus 84 ~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~p~~---~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~s 151 (470)
T 3i6d_A 84 EHLLVNNATGQSYVL--VNRTLHPMPKGAVMGIPTK---IAPFVS-TGLFSLSGKARAAMDFIL------PASKTKDDQS 151 (470)
T ss_dssp CTTEEECCCCCEEEE--CSSCEEECCC-------------------------CCSHHHHHHHHS------CCCSSSSCCB
T ss_pred cceeecCCCCccEEE--ECCEEEECCCCcccCCcCc---hHHhhc-cCcCCHHHHHHHhcCccc------CCCCCCCCcC
Confidence 876542211111111 112211111100 01110 111111 011111111121111111 0112345689
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHH-------Hhh---------------ccCCeEEee
Q 009635 209 VQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQE---------------KHGSKMAFL 266 (530)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------~~g~~~~~~ 266 (530)
+.+|+++. +..++.+.++.++...++..++++++.......+..+ ... ..+..+..+
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (470)
T 3i6d_A 152 LGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTL 230 (470)
T ss_dssp HHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEE
T ss_pred HHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEe
Confidence 99999886 6777888889999999999999998876543322100 000 002234455
Q ss_pred cCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHH
Q 009635 267 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFK 346 (530)
Q Consensus 267 ~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~ 346 (530)
.+| +..+++.|++.+.+ ++|+++++|++|..++++ +.|++.+|+++.||+||+|+|++.+..++++.. ...
T Consensus 231 ~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~----~~~ 301 (470)
T 3i6d_A 231 STG-LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPHKAAAGMLSELP----AIS 301 (470)
T ss_dssp TTC-THHHHHHHHHTCCS--EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCHHHHHHHTTTST----THH
T ss_pred CCh-HHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCHHHHHHHcCCch----hhH
Confidence 555 67788877776644 799999999999985554 368899998899999999999999999986642 247
Q ss_pred HHhccCCccEEEEEEEecccccccc-C--ccccccC-Cc--ceeeeccCcccccccCCCccEEEEEeeCc--cccCCCCh
Q 009635 347 RLEKLVGVPVINIHIWFDRKLKNTY-D--HLLFSRS-SL--LSVYADMSLTCKEYYNPNQSMLELVFAPA--EEWISCSD 418 (530)
Q Consensus 347 ~l~~~~~~~~~~v~~~~~~~~~~~~-~--~~~~~~~-~~--~~~~~~~s~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~ 418 (530)
+++.+.+.++.++++.|++++|+.. + .++.+.. +. ..+.++ +...+.+.|++..++.+++++. ..+...++
T Consensus 302 ~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~ 380 (470)
T 3i6d_A 302 HLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWT-NKKWPHAAPEGKTLLRAYVGKAGDESIVDLSD 380 (470)
T ss_dssp HHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEH-HHHCGGGSCTTCEEEEEEECCSSCCGGGTSCH
T ss_pred HHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEE-cCcCCCcCCCCCEEEEEEECCCCCccccCCCH
Confidence 7888999999999999999998532 1 1222322 21 122222 2223455666777666655432 34667899
Q ss_pred hHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCC----CCCCCCCCCCceEEecccccCCCCCcH
Q 009635 419 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASM 494 (530)
Q Consensus 419 e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~~~i 494 (530)
+++++.++++|.+++|.... +......+|+.+.+.+.++... ..+.+.++.+||||||+++.. .++
T Consensus 381 ~~~~~~~~~~l~~~~g~~~~-------p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~gv 450 (470)
T 3i6d_A 381 NDIINIVLEDLKKVMNINGE-------PEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG---VGI 450 (470)
T ss_dssp HHHHHHHHHHHGGGSCCCSC-------CSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---CSH
T ss_pred HHHHHHHHHHHHHHhCCCCC-------ceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC---CCH
Confidence 99999999999999986321 2234455666666666665321 122234567899999998865 469
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009635 495 EGAVLSGKLCAQAIVQDY 512 (530)
Q Consensus 495 ~gA~~sg~~aA~~vl~~~ 512 (530)
++|+.||+++|++|++.+
T Consensus 451 ~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 451 PDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999876
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=1e-35 Score=300.49 Aligned_cols=401 Identities=14% Similarity=0.190 Sum_probs=265.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecC--CcchHHHHHHHcCCCCCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG--AYPNIQNLFGELGINDRLQ 135 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~--~~~~~~~l~~~lg~~~~~~ 135 (530)
+||+|||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|++.+.. ....+.++++++|+...+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIV 79 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEE
Confidence 5999999999999999999999999999999999999999876 579999999866542 3456889999999865433
Q ss_pred eeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHHHH
Q 009635 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (530)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (530)
.......+.. .+....+. . .. ..+...++.+........... ....+..++.+|+.+
T Consensus 80 ~~~~~~~~~~---~g~~~~~~--~----~~----------~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~l~~ 136 (421)
T 3nrn_A 80 NSNPKGKILW---EGKIFHYR--E----SW----------KFLSVKEKAKALKLLAEIRMN----KLPKEEIPADEWIKE 136 (421)
T ss_dssp ECSSSCEEEE---TTEEEEGG--G----GG----------GGCC--------CCHHHHHTT----CCCCCCSBHHHHHHH
T ss_pred ECCCCeEEEE---CCEEEEcC--C----ch----------hhCCHhHHHHHHHHHHHHHhc----cCCCCCCCHHHHHHH
Confidence 2221111111 11111110 0 00 001111111111100000000 011234789999999
Q ss_pred cCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccchHHHHHHHHHcCcEEEeccee
Q 009635 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (530)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V 295 (530)
.++..+..+.++.++....++.++.+++.......+..... .+. ..++.|| +..++++|.+.++++|++|+++++|
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 137 KIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR--WGG-PGLIRGG-CKAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp HTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTC-HHHHHHHHHHHHHTTTCEEESSCCE
T ss_pred hcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh--cCC-cceecCC-HHHHHHHHHHHHHHCCCEEEcCCeE
Confidence 87777777888888888888889999998766655544322 122 3466776 7999999999999999999999999
Q ss_pred eEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEeccccccccCccc
Q 009635 296 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLL 375 (530)
Q Consensus 296 ~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~ 375 (530)
++|..+ ++.+ | +.+|++++||+||+|+|++.+.+|++....+..+.+++.++.+.+..++++.++++...+ .+++
T Consensus 213 ~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~ 287 (421)
T 3nrn_A 213 VEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG-NTIV 287 (421)
T ss_dssp EEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC-SSEE
T ss_pred EEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC-CeEE
Confidence 999874 4544 5 456779999999999999999999975434556677888999889999999999885433 3334
Q ss_pred cccCCcceeeeccCcccccccCCCccEEEEEeeCccccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecC
Q 009635 376 FSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTP 455 (530)
Q Consensus 376 ~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p 455 (530)
+..++-+..+...+..++.++|+|+.++.+...- ...+.++..+.++++|.+++|. . .+.. ..+|+
T Consensus 288 ~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~----~~~~~~~~~~~~~~~L~~~~p~-~-------~~~~--~~~~~ 353 (421)
T 3nrn_A 288 FTPGLMINGFNEPSALDKSLAREGYTLIMAHMAL----KNGNVKKAIEKGWEELLEIFPE-G-------EPLL--AQVYR 353 (421)
T ss_dssp ECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEEC----TTCCHHHHHHHHHHHHHHHCTT-C-------EEEE--EEEC-
T ss_pred EcCCcceeeEeccCCCCCCcCCCCceEEEEEEee----ccccHHHHHHHHHHHHHHHcCC-C-------eEEE--eeecc
Confidence 4332213223455667888899988777653321 1223356699999999999992 1 1222 23344
Q ss_pred CceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHH
Q 009635 456 RSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 508 (530)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~v 508 (530)
.+.+.+...... .+. .++ +|||+|||++.+.+...++||+.||++||++|
T Consensus 354 ~~~p~~~~~~~~-~~~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 354 DGNPVNRTRAGL-HIE-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp -------------CCC-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCCcccccCCC-CCC-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 444433221111 122 567 99999999999852225599999999999998
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1.5e-36 Score=311.85 Aligned_cols=420 Identities=17% Similarity=0.232 Sum_probs=277.8
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCC
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (530)
....+||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+...
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~ 91 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGR 91 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCcce
Confidence 34678999999999999999999999999999999999999999976 47899999999998777789999999998754
Q ss_pred cceec---cceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHH
Q 009635 134 LQWKE---HSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (530)
Q Consensus 134 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (530)
+.+.. ...++.. ++... . +|.. ...++.. ....+.++.+.+....... ....++.++.
T Consensus 92 ~~~~~~~~~~~~~~~---~g~~~--~----~p~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~ 152 (478)
T 2ivd_A 92 IRAADPAAKRRYVYT---RGRLR--S----VPAS---PPAFLAS-DILPLGARLRVAGELFSRR------APEGVDESLA 152 (478)
T ss_dssp EECSCSSCCCEEEEE---TTEEE--E----CCCS---HHHHHTC-SSSCHHHHHHHHGGGGCCC------CCTTCCCBHH
T ss_pred eeecCccccceEEEE---CCEEE--E----CCCC---HHHhccC-CCCCHHHHHHHhhhhhcCC------CCCCCCCCHH
Confidence 33221 0111111 11111 1 1111 1222221 2333444443332221110 0124568999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHh----------------------hccC----CeEE
Q 009635 211 EWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----------------------EKHG----SKMA 264 (530)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g----~~~~ 264 (530)
+|+++. +..++.+.++.++....++.++++++....+..+..+.. ...+ ..+.
T Consensus 153 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (478)
T 2ivd_A 153 AFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALS 231 (478)
T ss_dssp HHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEE
T ss_pred HHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEE
Confidence 999986 677888888888888888889999987655433322110 0112 4456
Q ss_pred eecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCcEEecCEEEEccChHHHhhhCCccccc
Q 009635 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKE 341 (530)
Q Consensus 265 ~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~---~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~ 341 (530)
++.|| +..|++.|++.+ |++|+++++|++|..++++ +.|++ .+|++++||+||+|+|++.+..|+++ .+
T Consensus 232 ~~~gG-~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~--~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~--l~ 303 (478)
T 2ivd_A 232 TFDGG-LQVLIDALAASL---GDAAHVGARVEGLAREDGG--WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP--LD 303 (478)
T ss_dssp EETTC-THHHHHHHHHHH---GGGEESSEEEEEEECC--C--CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT--TC
T ss_pred EECCC-HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCe--EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc--cC
Confidence 66776 788989888877 5799999999999975554 35777 67778999999999999998988865 24
Q ss_pred cHHHHHHhccCCccEEEEEEEeccccccccCc--cccc---cCCcceeeeccCcccccccCCCccEEEEEeeCc--cccC
Q 009635 342 MAYFKRLEKLVGVPVINIHIWFDRKLKNTYDH--LLFS---RSSLLSVYADMSLTCKEYYNPNQSMLELVFAPA--EEWI 414 (530)
Q Consensus 342 ~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~~--~~~~ 414 (530)
..+.++++++.+.++.++++.|++++|...+. ...+ +.+...+.++.+ ..+...|++..++.++..+. ..|.
T Consensus 304 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~p~g~~~l~~~~~~~~~~~~~ 382 (478)
T 2ivd_A 304 DALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHAST-TFPFRAEGGRVLYSCMVGGARQPGLV 382 (478)
T ss_dssp HHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHH-HCGGGBSTTCEEEEEEEECTTCGGGG
T ss_pred HHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcc-cCCCcCCCCCEEEEEEeCCcCCcccc
Confidence 45667888899999999999999998753111 1222 122333333221 23344566766665544432 3456
Q ss_pred CCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCC----CCCCCCCCCCceEEecccccCCC
Q 009635 415 SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKY 490 (530)
Q Consensus 415 ~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~ 490 (530)
..+++++++.++++|.+++|.... +......+|+.+.+.+.++... ..+...+ .+||||||+++..
T Consensus 383 ~~~~~~~~~~~~~~l~~~~~~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~g-- 452 (478)
T 2ivd_A 383 EQDEDALAALAREELKALAGVTAR-------PSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYKG-- 452 (478)
T ss_dssp GSCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTSC--
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCCC--
Confidence 778999999999999999986321 1223345666654444444211 0111122 6799999999743
Q ss_pred CCcHHHHHHHHHHHHHHHHHhhhh
Q 009635 491 LASMEGAVLSGKLCAQAIVQDYVL 514 (530)
Q Consensus 491 ~~~i~gA~~sg~~aA~~vl~~~~~ 514 (530)
++++||+.||++||++|++.+++
T Consensus 453 -~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 453 -VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp -CSHHHHHHHHHHHHHHHCC----
T ss_pred -CCHHHHHHHHHHHHHHHHHhhcc
Confidence 47999999999999999887754
No 8
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=311.26 Aligned_cols=420 Identities=19% Similarity=0.183 Sum_probs=280.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--cEEEEecCcccCceeeeeecCCCCEEeeeeceecCC---cchHHHHHHHcCCC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGA---YPNIQNLFGELGIN 131 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~---~~~~~~l~~~lg~~ 131 (530)
++||+|||||++||+||++|+++|+ +|+|||+++++||++.+....+|+.+|.|++++... +..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 3699999999999999999999999 999999999999999987655799999999988653 55688999999998
Q ss_pred CCcceeccc-----eeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCc
Q 009635 132 DRLQWKEHS-----MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDG 206 (530)
Q Consensus 132 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (530)
..+...... ..+.. ..+....+ +..+. .+ +.....+...........+.. .....++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~--~~g~~~~~--p~~~~----~~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 143 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLY--VGGALHAL--PTGLR----GL---LRPSPPFSKPLFWAGLRELTK-------PRGKEPD 143 (477)
T ss_dssp GGEEEECTTSHHHHCEEEE--ETTEEEEC--CCSSC----C------CCTTSCSCSSHHHHTTTTS-------CCCCSSC
T ss_pred ceeeecCCCCchhcceEEE--ECCEEEEC--CCChh----hc---ccccchhhhHHHHHHHHhhhc-------CCCCCCC
Confidence 654332110 00100 01111111 00000 00 000000000001111111110 0112356
Q ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhh---------------------------cc
Q 009635 207 LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE---------------------------KH 259 (530)
Q Consensus 207 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 259 (530)
.++.+|+++. +..++.+.++.++...++..++++++....+..+...... ..
T Consensus 144 ~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
T 3nks_A 144 ETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAE 222 (477)
T ss_dssp CBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHT
T ss_pred cCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhccc
Confidence 8999999885 5677888889999999999999999887765443221100 01
Q ss_pred CCeEEeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccc
Q 009635 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 339 (530)
Q Consensus 260 g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~ 339 (530)
+....++.|| +..++++|.+.+.++|++|+++++|++|..++++ .+.|++.++ ++.||+||+|+|++.+..|+++..
T Consensus 223 ~~~~~~~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~~~~-~~~ad~vv~a~p~~~~~~ll~~~~ 299 (477)
T 3nks_A 223 RWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSLRDS-SLEADHVISAIPASVLSELLPAEA 299 (477)
T ss_dssp TCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEECSSC-EEEESEEEECSCHHHHHHHSCGGG
T ss_pred CccEEEECCC-HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEECCe-EEEcCEEEECCCHHHHHHhccccC
Confidence 1234556666 7999999999999999999999999999985444 235766544 899999999999999999987643
Q ss_pred cccHHHHHHhccCCccEEEEEEEeccccccc--cCccccc--cCCcceeeeccCccccccc-CCCccEEEEEeeCc--cc
Q 009635 340 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNT--YDHLLFS--RSSLLSVYADMSLTCKEYY-NPNQSMLELVFAPA--EE 412 (530)
Q Consensus 340 ~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~s~~~~~~~-~~~~~v~~~~~~~~--~~ 412 (530)
....+++.++.+.++.++++.|++++|.. ++.++.. +....++.++.+ .++.+. +++..++.+++++. ..
T Consensus 300 --~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~l~~~~gg~~~~~ 376 (477)
T 3nks_A 300 --APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSV-AFPEQDGSPPGLRVTVMLGGSWLQT 376 (477)
T ss_dssp --HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHH-HCGGGSTTTTCEEEEEEECHHHHHH
T ss_pred --HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEecc-ccCCCCCCCCceEEEEEECCccccc
Confidence 35667888899999999999999998842 3222222 223334433332 233332 34666666555432 11
Q ss_pred c----CCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCCCC----CCCCCCceEEecc
Q 009635 413 W----ISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL----QRSPVEGFYLAGD 484 (530)
Q Consensus 413 ~----~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~l~~aG~ 484 (530)
+ ...++|++++.++++|.++++.... +..+...+|+.+.+.+.++....... +.+..++|++||+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-------~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~ 449 (477)
T 3nks_A 377 LEASGCVLSQELFQQRAQEAAATQLGLKEM-------PSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGA 449 (477)
T ss_dssp HHHSSCCCCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECST
T ss_pred cccccCCCCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 2 1468999999999999999985321 23455677888887777664321111 1112458999999
Q ss_pred cccCCCCCcHHHHHHHHHHHHHHHHHh
Q 009635 485 YTKQKYLASMEGAVLSGKLCAQAIVQD 511 (530)
Q Consensus 485 ~~~~~~~~~i~gA~~sg~~aA~~vl~~ 511 (530)
++.. .+|++|+.||+++|++|+.+
T Consensus 450 ~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 450 SYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp TTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred CCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 9765 47999999999999999875
No 9
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=9.2e-36 Score=307.95 Aligned_cols=433 Identities=19% Similarity=0.224 Sum_probs=221.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCC--Cc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND--RL 134 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~--~~ 134 (530)
+++|||||||++||+||+.|+++|++|+||||++++||++.++. .+|+.+|.|++++... ..+.++++.+|... .+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~-~~~~~l~~~~g~~~~~~~ 78 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDP-SAIEELFALAGKQLKEYV 78 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCT-HHHHHHHHTTTCCGGGTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCc-hhHHHHHHHhcchhhhce
Confidence 46899999999999999999999999999999999999999987 5899999999988642 23567778877542 23
Q ss_pred ceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhccc---CCChHHHHHhhhhhhhh----h-----------hc
Q 009635 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNE---MLTWPEKVKFAIGLLPA----I-----------IG 196 (530)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~-----------~~ 196 (530)
.+.+....+.+...++... .+ +.....+...+.... ...+.+.......+... . ..
T Consensus 79 ~~~~~~~~~~~~~~~g~~~--~~----~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (501)
T 4dgk_A 79 ELLPVTPFYRLCWESGKVF--NY----DNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLR 152 (501)
T ss_dssp CEEEESSSEEEEETTSCEE--EE----CSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHH
T ss_pred eeEecCcceEEEcCCCCEE--Ee----eccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhh
Confidence 3333222222222222211 11 111111111111000 00000000000000000 0 00
Q ss_pred Ccccccc-cCcccHHHHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccch
Q 009635 197 GQAYVEA-QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC 275 (530)
Q Consensus 197 ~~~~~~~-~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~ 275 (530)
....+.. ....++.+++.+.. ..+..+.++..... ..+..+...+....+ ..+.....| ..++.|| +..|+
T Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~-~~~~l~~~l~~~~~-~~g~~p~~~~~~~~~---~~~~~~~~G--~~~p~GG-~~~l~ 224 (501)
T 4dgk_A 153 AAPQLAKLQAWRSVYSKVASYI-EDEHLRQAFSFHSL-LVGGNPFATSSIYTL---IHALEREWG--VWFPRGG-TGALV 224 (501)
T ss_dssp SGGGTTTSHHHHHHHHHHHTTC-CCHHHHHHHHHHHH-HHHSCC--CCCTHHH---HHHHHSCCC--EEEETTH-HHHHH
T ss_pred hhhhhhhhhhcccHHHHHHHHh-ccHHHHhhhhhhhc-ccCCCcchhhhhhhh---hhhhhccCC--eEEeCCC-CcchH
Confidence 0000000 00134556666552 33333333332211 122333333322221 112222222 4577777 79999
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChH-HHhhhCCccccccHHHHHHhccCCc
Q 009635 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQLPENWKEMAYFKRLEKLVGV 354 (530)
Q Consensus 276 ~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~-~~~~ll~~~~~~~~~~~~l~~~~~~ 354 (530)
++|++.++++|++|++|++|++|.. +++++++|++.+|+++.||.||++++++ ++..|+++...+..+.+.+++..+.
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 303 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMS 303 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC---------------------------C
T ss_pred HHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccC
Confidence 9999999999999999999999998 4677889999999999999999988664 5667887765555555666666544
Q ss_pred -cEEEEEEEecccccc-ccCcccccc------------C---Ccceeee-ccCcccccccCCCccEEEE-EeeCccccCC
Q 009635 355 -PVINIHIWFDRKLKN-TYDHLLFSR------------S---SLLSVYA-DMSLTCKEYYNPNQSMLEL-VFAPAEEWIS 415 (530)
Q Consensus 355 -~~~~v~~~~~~~~~~-~~~~~~~~~------------~---~~~~~~~-~~s~~~~~~~~~~~~v~~~-~~~~~~~~~~ 415 (530)
+.+++++.++++... ....+.+.. . ..+.++. ..+..++.++|+|+..+.+ ...+...+..
T Consensus 304 ~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~ 383 (501)
T 4dgk_A 304 NSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTAN 383 (501)
T ss_dssp CEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSC
T ss_pred CceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCcccccc
Confidence 477788888876531 111111110 0 1122322 3456778889999876644 3444433322
Q ss_pred C----ChhHHHHHHHHHHHHhC-CCCcccccccceEEEEEEeecCCce-----------eecCCC---CCCCCCCC-CCC
Q 009635 416 C----SDSEIIDATMKELAKLF-PDEISADQSKAKIVKYHVVKTPRSV-----------YKTIPN---CEPCRPLQ-RSP 475 (530)
Q Consensus 416 ~----~~e~~~~~~~~~l~~~~-p~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~~~~---~~~~~~~~-~~~ 475 (530)
. .++++.+++++.|.+.+ |+... .+. .....+|... |+..+. ...++|.. .+|
T Consensus 384 ~~~~~~~~~~~~~vl~~l~~~~~P~~~~------~i~-~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~ 456 (501)
T 4dgk_A 384 LDWTVEGPKLRDRIFAYLEQHYMPGLRS------QLV-THRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKT 456 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCTTHHH------HEE-EEEEECTTTTC------------------------------C
T ss_pred ccHHHHHHHHHHHHHHHHHHhhCCChHH------ceE-EEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCC
Confidence 2 24678889999998754 76432 233 3345556532 222221 12245543 478
Q ss_pred CCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhhH
Q 009635 476 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 515 (530)
Q Consensus 476 ~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~~ 515 (530)
++|||+||+++.++ ++|+||+.||++||++|+++|...
T Consensus 457 i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 457 ITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp CTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999886 789999999999999999998654
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1e-36 Score=312.89 Aligned_cols=429 Identities=18% Similarity=0.238 Sum_probs=280.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--CcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G--~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (530)
++||+|||||++||+||++|+++| ++|+|||+++++||++.+.. .+|+.+|.|++++...++.+.++++++|++...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-EDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-STTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 99999999999999998876 479999999999988888899999999998654
Q ss_pred ceeccceeeecCCCCCCcccccCCC--CCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHH
Q 009635 135 QWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (530)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (530)
........+.. ..+....+.... .+|. .+..++. ...+....+. ........ .........++.++.+|
T Consensus 83 ~~~~~~~~~~~--~~g~~~~~p~~~~~~~p~---~~~~~~~-~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 83 VRNNTSQAFIL--DTGGLHPIPKGAVMGIPT---DLDLFRQ-TTLLTEEEKQ-EVADLLLH--PSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp EECCCCCEEEE--ETTEEEECCSSEETTEES---CHHHHTT-CSSSCHHHHH-HHHHHHHS--CCTTCCCCSSCCBHHHH
T ss_pred eecCCCceEEE--ECCEEEECCCcccccCcC---chHHHhh-ccCCChhHHH-HhhCcccC--CcccccCCCCCcCHHHH
Confidence 43211111111 112211111100 0111 1222222 2333433333 22211110 00101113456899999
Q ss_pred HHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHH-------Hh----hc--------------cCCeEEeec
Q 009635 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQ----EK--------------HGSKMAFLD 267 (530)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~--------------~g~~~~~~~ 267 (530)
+++. +..++.+.++.++....+..++++++.......+..+ .. .. .+..+.++.
T Consensus 154 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (475)
T 3lov_A 154 LRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLE 232 (475)
T ss_dssp HHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEET
T ss_pred HHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeC
Confidence 9885 5678888899999999999998888754322222111 00 00 134456666
Q ss_pred CCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHH
Q 009635 268 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 347 (530)
Q Consensus 268 gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~ 347 (530)
+| +..+++.|++.+.+ ++|+++++|++|..++++ +.|++.+| ++.||+||+|+|++.+..++++.. . ..
T Consensus 233 ~G-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~--~---~~ 301 (475)
T 3lov_A 233 TG-LESLIERLEEVLER--SEIRLETPLLAISREDGR--YRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAH--L---PE 301 (475)
T ss_dssp TC-HHHHHHHHHHHCSS--CEEESSCCCCEEEEETTE--EEEECTTC-CEEESEEEECSCHHHHHHHCTTSC--C---HH
T ss_pred Ch-HHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE--EEEEECCC-eEECCEEEECCCHHHHHHHcCccC--H---HH
Confidence 66 67788888877654 799999999999985444 35888899 899999999999999999987652 1 67
Q ss_pred HhccCCccEEEEEEEeccccccccCc--ccccc-CCc--ceeeeccCcccccccCCCccEEEEEeeC--ccccCCCChhH
Q 009635 348 LEKLVGVPVINIHIWFDRKLKNTYDH--LLFSR-SSL--LSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSE 420 (530)
Q Consensus 348 l~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~-~~~--~~~~~~~s~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~e~ 420 (530)
+.++.+.++.++++.|+++++...+. ++.+. .+. .++.++ +..++...|+ ..++..++.. ...+...++|+
T Consensus 302 ~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~ 379 (475)
T 3lov_A 302 LEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEV 379 (475)
T ss_dssp HHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHH
T ss_pred HhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHH
Confidence 78889999999999999988433222 22222 221 222222 2223334444 4555544432 24456788999
Q ss_pred HHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCC----CCCCCCCCCCceEEecccccCCCCCcHHH
Q 009635 421 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASMEG 496 (530)
Q Consensus 421 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~~~i~g 496 (530)
+++.++++|.+++|.... +......+|+.+.+.+.++... .++.+.++.+||||||+++.. .++++
T Consensus 380 ~~~~~~~~L~~~~g~~~~-------p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~g~~~ 449 (475)
T 3lov_A 380 LQQAVLQDLEKICGRTLE-------PKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---VGLPD 449 (475)
T ss_dssp HHHHHHHHHHHHHSSCCC-------CSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---SSHHH
T ss_pred HHHHHHHHHHHHhCCCCC-------CeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---CCHHH
Confidence 999999999999986321 2234455666666666665321 122234467899999998875 47999
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhc
Q 009635 497 AVLSGKLCAQAIVQDYVLLAARG 519 (530)
Q Consensus 497 A~~sg~~aA~~vl~~~~~~~~~~ 519 (530)
|+.||+++|++|++.++......
T Consensus 450 a~~sG~~aA~~i~~~l~~~~~~~ 472 (475)
T 3lov_A 450 CVASAKTMIESIELEQSHTDESV 472 (475)
T ss_dssp HHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999998765544
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2.6e-36 Score=312.19 Aligned_cols=429 Identities=17% Similarity=0.191 Sum_probs=274.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (530)
.+.+||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+....
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~ 89 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREKQ 89 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCcccc
Confidence 3568999999999999999999999999999999999999998876 478999999999987778899999999987643
Q ss_pred ceeccc-eeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHH
Q 009635 135 QWKEHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (530)
Q Consensus 135 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 213 (530)
.+.... ..+.. .++.... +|.. ...++.. ..+.+.++++........... .......++.++.+|+
T Consensus 90 ~~~~~~~~~~~~--~~g~~~~------~p~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~l 156 (504)
T 1sez_A 90 QFPLSQNKRYIA--RNGTPVL------LPSN---PIDLIKS-NFLSTGSKLQMLLEPILWKNK-KLSQVSDSHESVSGFF 156 (504)
T ss_dssp ECCSSCCCEEEE--SSSSEEE------CCSS---HHHHHHS-SSSCHHHHHHHHTHHHHC-----------CCCBHHHHH
T ss_pred eeccCCCceEEE--ECCeEEE------CCCC---HHHHhcc-ccCCHHHHHHHhHhhhccCcc-cccccCCCCccHHHHH
Confidence 332111 01111 1111111 1211 1122221 233333333332211100000 0000113458999999
Q ss_pred HHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHH-----------Hhhc-------------------cCCeE
Q 009635 214 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-----------LQEK-------------------HGSKM 263 (530)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-------------------~g~~~ 263 (530)
++. +..++.+.++.++...+++.++++++....+..+..+ +... .....
T Consensus 157 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (504)
T 1sez_A 157 QRH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGS 235 (504)
T ss_dssp HHH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSC
T ss_pred HHH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCce
Confidence 886 6778888888888888888899998876543222111 1000 01123
Q ss_pred EeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCC----EEEEEEc--CC---cEEecCEEEEccChHHHhhh
Q 009635 264 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT----VKNFLLT--NG---NVIDGDAYVFATPVDILKLQ 334 (530)
Q Consensus 264 ~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~----~~~v~~~--~G---~~i~ad~VI~a~~~~~~~~l 334 (530)
.++.|| ++.|+++|++.+.+ ++|++|++|++|..++++. .+.|++. +| +++.||+||+|+|+..+.++
T Consensus 236 ~~~~GG-~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~l 312 (504)
T 1sez_A 236 FSFLGG-MQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM 312 (504)
T ss_dssp BEETTC-THHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTS
T ss_pred EeeCcH-HHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHH
Confidence 445666 67788777765421 7899999999999865552 1345543 45 57999999999999999998
Q ss_pred CCc---cccccHHHHHHhccCCccEEEEEEEeccccccc-cC--cccccc-C-----CcceeeeccCcccccccCCCccE
Q 009635 335 LPE---NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YD--HLLFSR-S-----SLLSVYADMSLTCKEYYNPNQSM 402 (530)
Q Consensus 335 l~~---~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~-~~--~~~~~~-~-----~~~~~~~~~s~~~~~~~~~~~~v 402 (530)
+++ ...+.. .+.++.+.++.++++.|++++|+. .. .+.++. . ...++.+. +..++...|++..+
T Consensus 313 l~~~~~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-s~~~~~~~p~g~~~ 388 (504)
T 1sez_A 313 KIAKRGNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFS-SMMFPDRAPNNVYL 388 (504)
T ss_dssp EEESSSSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEH-HHHCGGGSCTTEEE
T ss_pred hhcccCCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEee-ccccCCcCCCCCEE
Confidence 832 111111 156777888999999999998853 11 122221 1 22332222 23344556777766
Q ss_pred EEEEeeCc--cccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCC---CCCCCCCC
Q 009635 403 LELVFAPA--EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR---PLQRSPVE 477 (530)
Q Consensus 403 ~~~~~~~~--~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~~~~~~ 477 (530)
+..+..+. ..|..+++|++++.++++|++++|....+ ......+|+.+.+.+.+++.... ....++++
T Consensus 389 l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p-------~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~ 461 (504)
T 1sez_A 389 YTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEP-------TYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLP 461 (504)
T ss_dssp EEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCC-------SSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHST
T ss_pred EEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCC-------eEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCC
Confidence 65544432 45778899999999999999999863211 12233445555555555432111 11234678
Q ss_pred ceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhhH
Q 009635 478 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 515 (530)
Q Consensus 478 ~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~~ 515 (530)
||||||+++.. .+++||+.||++||++|++.++..
T Consensus 462 ~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 462 GLFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp TEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999874 589999999999999999988654
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=8.8e-35 Score=301.70 Aligned_cols=419 Identities=15% Similarity=0.194 Sum_probs=268.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (530)
.++||||||||++||+||++|+++ |++|+|||+++++||++++....+|+.+|.|+|++...++.+.+++++++.....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~~~ 88 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDD 88 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCccce
Confidence 568999999999999999999985 9999999999999999998766789999999999998888999999998765432
Q ss_pred -ceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHH
Q 009635 135 -QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (530)
Q Consensus 135 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 213 (530)
........... .+++..+.+...+ ..+...........+..... ..........++.+|+
T Consensus 89 ~~~~~~~~~i~~---~g~~~~~p~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~ 149 (513)
T 4gde_A 89 WYTHQRISYVRC---QGQWVPYPFQNNI--------------SMLPKEEQVKCIDGMIDAAL--EARVANTKPKTFDEWI 149 (513)
T ss_dssp EEEEECCEEEEE---TTEEEESSGGGGG--------------GGSCHHHHHHHHHHHHHHHH--HHHTCCSCCCSHHHHH
T ss_pred eEEecCceEEEE---CCeEeecchhhhh--------------hhcchhhHHHHHHHHHHHHH--hhhcccccccCHHHHH
Confidence 11111111111 1222211111100 00111111111111111100 0011223457899998
Q ss_pred HHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHH---------HHHHHHHh-h---c--cCCeEEee-cCCCCccchHH
Q 009635 214 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCIL---------IALNRFLQ-E---K--HGSKMAFL-DGNPPERLCLP 277 (530)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~---~--~g~~~~~~-~gg~~~~l~~~ 277 (530)
.+. +...+.+.++.++...+++.++++++..... ......+. . . ......++ .|| +..++++
T Consensus 150 ~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~ 227 (513)
T 4gde_A 150 VRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGG-TGGIWIA 227 (513)
T ss_dssp HHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSH-HHHHHHH
T ss_pred HHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCC-HHHHHHH
Confidence 875 4567778888888888888887776653211 01111111 1 1 11223333 455 7899999
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEE
Q 009635 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (530)
Q Consensus 278 l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~ 357 (530)
|++.+.+.|++|++|++|++|.. +++. +++.+|+++.||+||+|+|...+..++++.. ...+...+.+.++.
T Consensus 228 l~~~l~~~g~~i~~~~~V~~I~~-~~~~---v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~~----~~~~~~~l~y~~~~ 299 (513)
T 4gde_A 228 VANTLPKEKTRFGEKGKVTKVNA-NNKT---VTLQDGTTIGYKKLVSTMAVDFLAEAMNDQE----LVGLTKQLFYSSTH 299 (513)
T ss_dssp HHHTSCGGGEEESGGGCEEEEET-TTTE---EEETTSCEEEEEEEEECSCHHHHHHHTTCHH----HHHHHTTCCEEEEE
T ss_pred HHHHHHhcCeeeecceEEEEEEc-cCCE---EEEcCCCEEECCEEEECCCHHHHHHhcCchh----hHhhhhcccCCceE
Confidence 99999999999999999999986 3442 6788999999999999999999999987642 33556778888888
Q ss_pred EEEEEecccccccc--Cc-cccccC--CcceeeeccCcccccccCCC---------------------ccEEEEEee--C
Q 009635 358 NIHIWFDRKLKNTY--DH-LLFSRS--SLLSVYADMSLTCKEYYNPN---------------------QSMLELVFA--P 409 (530)
Q Consensus 358 ~v~~~~~~~~~~~~--~~-~~~~~~--~~~~~~~~~s~~~~~~~~~~---------------------~~v~~~~~~--~ 409 (530)
.+.+.++....... .. +.+++. ++..+ ...++..+...|++ ..++...+. .
T Consensus 300 ~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri-~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (513)
T 4gde_A 300 VIGVGVRGSRPERIGDKCWLYFPEDNCPFYRA-TIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVS 378 (513)
T ss_dssp EEEEEEESSCCTTTTTCCEEECCSTTCSCSEE-ECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEE
T ss_pred EEEEEEeccccccccccceeeccCCCCceeEE-EecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEeccc
Confidence 89998887643211 11 111211 11111 11222222222222 222222111 1
Q ss_pred ccccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCC----CCCCCCCCCCceEEeccc
Q 009635 410 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDY 485 (530)
Q Consensus 410 ~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~ 485 (530)
......+++|++++.+++.|.++.+.... ..++...+.+||++.+.+..+... .++.+.. +|||++|..
T Consensus 379 ~~~~~~~~de~l~~~~~~~L~~~~~i~~~-----~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~ 451 (513)
T 4gde_A 379 ESSMKPVNQETILADCIQGLVNTEMLKPT-----DEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD--KDIWSRGRF 451 (513)
T ss_dssp EBTTBCCCTTTHHHHHHHHHHHTTSSCTT-----CEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--TTEEECSTT
T ss_pred chhccCCCHHHHHHHHHHHHHHhcCCCCc-----cceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh--cCcEEecCC
Confidence 23444788999999999999998774322 236667778889888777666322 1222222 599999988
Q ss_pred ccCCCC-CcHHHHHHHHHHHHHHHHHh
Q 009635 486 TKQKYL-ASMEGAVLSGKLCAQAIVQD 511 (530)
Q Consensus 486 ~~~~~~-~~i~gA~~sg~~aA~~vl~~ 511 (530)
....|. +++++|+.+|+.||+.|++-
T Consensus 452 g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 452 GSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp TTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred cccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 777764 57999999999999999874
No 13
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=3.2e-32 Score=275.91 Aligned_cols=411 Identities=16% Similarity=0.185 Sum_probs=252.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecC--CCCEEeeeeceecCC-cchHHHHHHHcCCCCCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG--DGDWYETGLHIFFGA-YPNIQNLFGELGINDRL 134 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~--~g~~~d~G~~~~~~~-~~~~~~l~~~lg~~~~~ 134 (530)
+||||||||++||+||+.|+++|++|+|||+++++||++.+.... .|..++.|++++... ...+.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 699999999999999999999999999999999999999875422 289999999999877 77788899999987532
Q ss_pred ceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHHH
Q 009635 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (530)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (530)
........+.. ..+.+. ...+........+... +.........+..............+ .++.+++.
T Consensus 82 ~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l~ 148 (431)
T 3k7m_X 82 ASEFTSFRHRL--GPTAVD-----QAFPIPGSEAVAVEAA-----TYTLLRDAHRIDLEKGLENQDLEDLD-IPLNEYVD 148 (431)
T ss_dssp CCCCCEECCBS--CTTCCS-----SSSCCCGGGHHHHHHH-----HHHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHHH
T ss_pred cCCCCcEEEEe--cCCeec-----CCCCCCHHHHHHHHHH-----HHHHHHHHHhcCCCCCccCcchhhhc-CCHHHHHH
Confidence 22111111100 011110 0000001111000000 00000011111000000111222344 88999999
Q ss_pred HcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHH---hh-ccCCeEEeecCCCCccchHHHHHHHH-HcCcEE
Q 009635 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QE-KHGSKMAFLDGNPPERLCLPIVEHIQ-SLGGEV 289 (530)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~~~~~~gg~~~~l~~~l~~~l~-~~g~~i 289 (530)
..+..... ..++..+....++.+.++++.......+...- .. ...... .+.++ .. .+.+.+. +.| +|
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~----~l~~~~~~~~g-~i 220 (431)
T 3k7m_X 149 KLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNG-SA----DLVDAMSQEIP-EI 220 (431)
T ss_dssp HHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTC-TH----HHHHHHHTTCS-CE
T ss_pred hcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCc-HH----HHHHHHHhhCC-ce
Confidence 88766554 44566666666777888888776654332210 00 011112 23333 33 3444443 345 99
Q ss_pred EecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEecccccc
Q 009635 290 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN 369 (530)
Q Consensus 290 ~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~ 369 (530)
++|++|++|..++++ + .|++.+|++++||+||+|+|+..+..+...+..+....+++....+....|+.+.|+++++.
T Consensus 221 ~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~ 298 (431)
T 3k7m_X 221 RLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG 298 (431)
T ss_dssp ESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT
T ss_pred EeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC
Confidence 999999999875444 3 58889997899999999999999888753333455566777888888899999999998852
Q ss_pred ccCccccccCCcceeeeccCcccccccC-CCccEEEEEeeCccccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEE
Q 009635 370 TYDHLLFSRSSLLSVYADMSLTCKEYYN-PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVK 448 (530)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 448 (530)
+....++....+.+.. .. ++..++..+..+.. +...+ + +.+.+.|++++|+.. ......
T Consensus 299 ----i~~~~d~~~~~~~~~~------~~~~~~~~l~~~~~g~~-~~~~~-~---~~~~~~l~~~~~~~~-----~~~~~~ 358 (431)
T 3k7m_X 299 ----IECVGDGIFPTLYDYC------EVSESERLLVAFTDSGS-FDPTD-I---GAVKDAVLYYLPEVE-----VLGIDY 358 (431)
T ss_dssp ----EEEEBSSSSSEEEEEE------ECSSSEEEEEEEEETTT-CCTTC-H---HHHHHHHHHHCTTCE-----EEEEEC
T ss_pred ----ceEcCCCCEEEEEeCc------CCCCCCeEEEEEecccc-CCCCC-H---HHHHHHHHHhcCCCC-----ccEeEe
Confidence 2112223222222211 11 33334433333222 43222 2 346678888888532 123344
Q ss_pred EEEeecCCc--eeec-CCC-CCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 009635 449 YHVVKTPRS--VYKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 511 (530)
Q Consensus 449 ~~~~~~p~~--~~~~-~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~ 511 (530)
++|...|++ .|.+ .++ .....+.+++|.++|||||++++..|+|+|+||++||+|||++|+..
T Consensus 359 ~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 359 HDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp CCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 566666663 4443 344 34556778889999999999999889999999999999999999864
No 14
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=6.4e-33 Score=286.22 Aligned_cols=429 Identities=16% Similarity=0.134 Sum_probs=258.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeec-CCCCEEeeeeceecCCcchHHHHHHHcCCCCC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-GDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (530)
...+||+|||||++||+||+.|++.|++|+|||+++++||++.+... ..|+.+|.|++++......+.++++++|+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 35679999999999999999999999999999999999999987653 36888999999998777778999999998642
Q ss_pred ccee-ccceeeecCCCCCCcc-------cccCCCCCCCch-hhHHHHHhcccCCChHHHHHhhhhhhhhhh--cCccccc
Q 009635 134 LQWK-EHSMIFAMPNKPGEFS-------RFDFPEVLPAPL-NGILAILRNNEMLTWPEKVKFAIGLLPAII--GGQAYVE 202 (530)
Q Consensus 134 ~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 202 (530)
.... .....+...+...... .+.+.- .+... .....++.. ....+..... .......
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 178 (498)
T 2iid_A 111 EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPV-KPSEAGKSAGQLYEE-----------SLGKVVEELKRTNCSYILN 178 (498)
T ss_dssp EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCC-CGGGTTCCHHHHHHH-----------HTHHHHHHHHHSCHHHHHH
T ss_pred eecccCCccEEEeCCeeecccccccCccccccCC-CccccCCCHHHHHHH-----------HHHHHHHHHhhccHHHHHH
Confidence 1100 0001111100000000 000000 00000 001111100 0000000000 0001112
Q ss_pred ccCcccHHHHHHHcC-CCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccchHHHHHH
Q 009635 203 AQDGLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (530)
Q Consensus 203 ~~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~ 281 (530)
..+..++.+|++..+ ++..... .+..+...... ...+......... ....+..+..+.|| +..|+++|++.
T Consensus 179 ~~~~~s~~~~l~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~gG-~~~l~~~l~~~ 250 (498)
T 2iid_A 179 KYDTYSTKEYLIKEGDLSPGAVD-MIGDLLNEDSG---YYVSFIESLKHDD---IFAYEKRFDEIVDG-MDKLPTAMYRD 250 (498)
T ss_dssp HHTTSBHHHHHHHTSCCCHHHHH-HHHHHTTCGGG---TTSBHHHHHHHHH---HHTTCCCEEEETTC-TTHHHHHHHHH
T ss_pred HhhhhhHHHHHHHccCCCHHHHH-HHHHhcCcccc---hhHHHHHHHHHHh---ccccCcceEEeCCc-HHHHHHHHHHh
Confidence 335578999998865 3443322 22222211100 0111111111111 11223345566666 78999999888
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc----EEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEE
Q 009635 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (530)
Q Consensus 282 l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~----~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~ 357 (530)
+.+ +|++|++|++|..++++ + .|++.+|+ +++||+||+|+|...+..+...+..+..+.++++++.+.++.
T Consensus 251 l~~---~i~~~~~V~~I~~~~~~-v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~ 325 (498)
T 2iid_A 251 IQD---KVHFNAQVIKIQQNDQK-V-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGT 325 (498)
T ss_dssp TGG---GEESSCEEEEEEECSSC-E-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEE
T ss_pred ccc---ccccCCEEEEEEECCCe-E-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCccee
Confidence 754 79999999999985444 3 57777764 489999999999998888753333566677889999999999
Q ss_pred EEEEEeccccccccC---ccccccCCcceeeeccCcccccccCCCccEEEEEeeC--ccccCCCChhHHHHHHHHHHHHh
Q 009635 358 NIHIWFDRKLKNTYD---HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKL 432 (530)
Q Consensus 358 ~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~e~~~~~~~~~l~~~ 432 (530)
||++.|+++||+..+ ...+.+.+...++.. + ...|++..++..+..+ ...|..++++++++.++++|.++
T Consensus 326 kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s----~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~ 400 (498)
T 2iid_A 326 KIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-N----HNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLI 400 (498)
T ss_dssp EEEEEESSCGGGGGTCCSSEEEESSTTCEEECC-S----SCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCccCCCccCCcccCCCCcceEEEC-C----CCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHH
Confidence 999999999997532 222233333333221 1 1134455555543332 35677889999999999999999
Q ss_pred CCCCccccc-ccceEEEEEEeecCCce--eec-CCC-CCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHH
Q 009635 433 FPDEISADQ-SKAKIVKYHVVKTPRSV--YKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 507 (530)
Q Consensus 433 ~p~~~~~~~-~~~~~~~~~~~~~p~~~--~~~-~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~ 507 (530)
+|....... ........+|...|+.. |.+ .++ .....+.+.+|.+||||||++++.. +|+++||+.||++||++
T Consensus 401 ~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~-~g~~~GAi~SG~raA~~ 479 (498)
T 2iid_A 401 HQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQA-HGWIDSTIKSGLRAARD 479 (498)
T ss_dssp HTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSS-SSCHHHHHHHHHHHHHH
T ss_pred cCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccC-CcCHHHHHHHHHHHHHH
Confidence 983221100 00123445566656543 332 222 1112234466789999999999765 48999999999999999
Q ss_pred HHHhhhh
Q 009635 508 IVQDYVL 514 (530)
Q Consensus 508 vl~~~~~ 514 (530)
|++.+..
T Consensus 480 i~~~l~~ 486 (498)
T 2iid_A 480 VNLASEN 486 (498)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9998863
No 15
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=1.6e-33 Score=288.35 Aligned_cols=423 Identities=19% Similarity=0.215 Sum_probs=249.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCcccCceeeeeecCCCCEEeeeeceecC----CcchHHHHHHH-cC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG----AYPNIQNLFGE-LG 129 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~----~~~~~~~l~~~-lg 129 (530)
..+||+|||||++||++|+.|++.|+ +|+|+|+++++||++.+.. ..|+.+|.|++++.+ ....+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWVEGVNGGKMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEE-ETTEEEESSCCEEEEESSSSCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecc-cCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcC
Confidence 46799999999999999999999998 8999999999999998865 478999999999873 33458889999 89
Q ss_pred CCCCcceeccc--eeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcc
Q 009635 130 INDRLQWKEHS--MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGL 207 (530)
Q Consensus 130 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (530)
+.......... .++. .++.. ++ .......+... .........+...+ .. ...++.
T Consensus 82 l~~~~~~~~~~~~~~~~---~~g~~--------~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~--~~~~~~ 138 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYK---EDGGV--------YD--EDYVQKRIELA-----DSVEEMGEKLSATL---HA--SGRDDM 138 (472)
T ss_dssp CCEEECCCTTGGGCEEC---SSSSB--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHTS---CT--TCTTCC
T ss_pred CceeeccCccccceeEc---CCCCC--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHhh---cc--ccchhh
Confidence 87532111000 0110 01111 11 11111111100 00000000000000 00 112234
Q ss_pred cHHH--HHHHcCC--CHHHHHHHHHHHHhh-cccCCCCcccHHHHHHHHHHHHhhccCCeEEe-ecCCCCccchHHHHHH
Q 009635 208 TVQE--WMRKQGV--PDRVTTEVFIAMSKA-LNFINPDELSMQCILIALNRFLQEKHGSKMAF-LDGNPPERLCLPIVEH 281 (530)
Q Consensus 208 s~~~--~l~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~gg~~~~l~~~l~~~ 281 (530)
++.+ ++.+... .....+.++..+... .+..+++..++..... ...+.. ..+..+.. ..|| +..+++.|++.
T Consensus 139 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~-~~~~~~~~~~~gG-~~~l~~~l~~~ 215 (472)
T 1b37_A 139 SILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LATFSD-FGDDVYFVADQRG-YEAVVYYLAGQ 215 (472)
T ss_dssp BHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSS-CHHHHH-HCSEEEEECCTTC-TTHHHHHHHHT
T ss_pred hHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccc-cccccc-cCCceeeeecCCc-HHHHHHHHHHh
Confidence 4432 4443321 111112233332211 1122222232211000 001111 11112222 2455 78999999888
Q ss_pred HHHc--------CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCC--ccccccHHHHHHhcc
Q 009635 282 IQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP--ENWKEMAYFKRLEKL 351 (530)
Q Consensus 282 l~~~--------g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~--~~~~~~~~~~~l~~~ 351 (530)
+.+. |++|+++++|++|..++++ + .|++.+|++++||+||+|+|++.+..++. .+..+..+.++++++
T Consensus 216 l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~ 293 (472)
T 1b37_A 216 YLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQF 293 (472)
T ss_dssp TSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHS
T ss_pred ccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhc
Confidence 8765 6899999999999985444 4 48899998999999999999999887653 233355667888889
Q ss_pred CCccEEEEEEEecccccccc-C--ccccccC--CcceeeeccCcccccccCCCccEEEEEeeC--ccccCCCChhHHHHH
Q 009635 352 VGVPVINIHIWFDRKLKNTY-D--HLLFSRS--SLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDA 424 (530)
Q Consensus 352 ~~~~~~~v~~~~~~~~~~~~-~--~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~e~~~~~ 424 (530)
.+.++.|+++.|+++||+.. + .+++.+. ....++... +. .. ++..++..++.+ +..|..++++++++.
T Consensus 294 ~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~-p~~~~l~~~~~~~~a~~~~~~~~~e~~~~ 368 (472)
T 1b37_A 294 DMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEF---EK-QY-PDANVLLVTVTDEESRRIEQQSDEQTKAE 368 (472)
T ss_dssp EEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEEC---TT-TS-TTCCEEEEEEEHHHHHHHHTSCHHHHHHH
T ss_pred CCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecc---cC-CC-CCCCEEEEEechHHHHHHHhCCHHHHHHH
Confidence 88999999999999999641 1 1222211 111222111 11 12 344444444432 235777889999999
Q ss_pred HHHHHHHhCCCCcccccccceEEEEEEeecCC--ceeec-CCCCCC-CCCCCCCCCCceEEecccccCCCCCcHHHHHHH
Q 009635 425 TMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKT-IPNCEP-CRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 500 (530)
Q Consensus 425 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~~~~~-~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~s 500 (530)
++++|++++|+...... ......+|...|+ +.|.+ .++... ..+.+++|++||||||++++..+.|+|+||++|
T Consensus 369 ~l~~L~~~~Pg~~~~~~--~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~S 446 (472)
T 1b37_A 369 IMQVLRKMFPGKDVPDA--TDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLS 446 (472)
T ss_dssp HHHHHHHHCTTSCCCCC--SEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCC--ceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHH
Confidence 99999999976321211 1222233333343 34432 344321 234567889999999999998777899999999
Q ss_pred HHHHHHHHHHhhhh
Q 009635 501 GKLCAQAIVQDYVL 514 (530)
Q Consensus 501 g~~aA~~vl~~~~~ 514 (530)
|++||++|++.++.
T Consensus 447 G~~aA~~i~~~l~~ 460 (472)
T 1b37_A 447 GIDSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 16
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=5.4e-34 Score=293.59 Aligned_cols=425 Identities=16% Similarity=0.138 Sum_probs=249.6
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecC----------------CCCEEeeeeceecCC
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG----------------DGDWYETGLHIFFGA 117 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~----------------~g~~~d~G~~~~~~~ 117 (530)
.+..+||+|||||++||+||+.|+++|++|+|||+++++||++.+.... .|..+|.|++++...
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQS 87 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETT
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccH
Confidence 4567899999999999999999999999999999999999998876532 578899999988766
Q ss_pred cchHHHHHHHcCCCCCcceecc-ceeee-cCCCCCCcccccCCCCCCCchhh-HHHHHhcccCCChHHHHHhhhhhhhhh
Q 009635 118 YPNIQNLFGELGINDRLQWKEH-SMIFA-MPNKPGEFSRFDFPEVLPAPLNG-ILAILRNNEMLTWPEKVKFAIGLLPAI 194 (530)
Q Consensus 118 ~~~~~~l~~~lg~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (530)
. .+.++++++|+......... ..++. .... .+. +....... ...+... ..+.+......
T Consensus 88 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~-g~~~~~~~~~~~~~~~-----~~~l~~~~~~~---- 149 (489)
T 2jae_A 88 H-ITLDYCRELGVEIQGFGNQNANTFVNYQSDT-------SLS-GQSVTYRAAKADTFGY-----MSELLKKATDQ---- 149 (489)
T ss_dssp S-THHHHHHHHTCCEEEECCCCTTSEEECCCSS-------TTT-TCCEEHHHHHHHHHHH-----HHHHHHHHHHH----
T ss_pred H-HHHHHHHHcCCceEEccccCCCceEEecCCc-------ccC-CccccHHHHhhhhhcc-----HHHHHHHHHhc----
Confidence 6 88999999998743211110 01110 1100 000 11111110 0011000 00000000000
Q ss_pred hcCcccccccCcccHHHHHHHcCCCHHHHHHHHHHHHhhcccCC------------CCcccHHHHHHHHHHHHh----hc
Q 009635 195 IGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFIN------------PDELSMQCILIALNRFLQ----EK 258 (530)
Q Consensus 195 ~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~----~~ 258 (530)
..........+.+++.+|+++.+-... +..+.......+..+ +.++...... .+..++. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 226 (489)
T 2jae_A 150 GALDQVLSREDKDALSEFLSDFGDLSD--DGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRS-GIGRNFSFDFGYD 226 (489)
T ss_dssp TTTTTTSCHHHHHHHHHHHHHHTTCCT--TSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHH-TTTTTGGGGGCTT
T ss_pred cccccccchhhHHHHHHHHHHhhhhhh--ccccccccchhhccCCCcccccCCCCCCcCHHHHhhh-hHHHHHhhhhccc
Confidence 000000111234577777775321000 000000000001001 1122111110 0111111 11
Q ss_pred cCCeEEeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC---cEEecCEEEEccChHHHhhhC
Q 009635 259 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQL 335 (530)
Q Consensus 259 ~g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G---~~i~ad~VI~a~~~~~~~~ll 335 (530)
....+.++.|| .+.|+++|++.+.+ ++|++|++|++|..++++ + .|++.+| ++++||+||+|+|+..+..++
T Consensus 227 ~~~~~~~~~gG-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~ 301 (489)
T 2jae_A 227 QAMMMFTPVGG-MDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-V-TVEYTAGGSKKSITADYAICTIPPHLVGRLQ 301 (489)
T ss_dssp TSSSEEEETTC-TTHHHHHHHHHHCG--GGEETTCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECSCHHHHTTSE
T ss_pred cCccEEeecCC-HHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-E-EEEEecCCeEEEEECCEEEECCCHHHHHhCc
Confidence 23446666776 78999999988743 789999999999985443 3 4777776 689999999999999988886
Q ss_pred CccccccHHHHHHhccCCccEEEEEEEecccccccc-C---ccccccCCcceeeeccCcccccccCCCccEEEEEeeC--
Q 009635 336 PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-D---HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP-- 409 (530)
Q Consensus 336 ~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~-- 409 (530)
. ..+..+.++++++.+.++.++++.|+++||+.. + .+...+.+...++.+ +... ..+...++..+..+
T Consensus 302 ~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~-s~~~---~~~~~~l~~~~~~g~~ 375 (489)
T 2jae_A 302 N--NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFP-YDHY---NSDRGVVVAYYSSGKR 375 (489)
T ss_dssp E--CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECC-SSST---TSSCEEEEEEEEETHH
T ss_pred c--CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeC-CCCC---CCCCCEEEEEeeCCch
Confidence 5 234466788889999999999999999998643 1 122334444444322 2111 11222333323332
Q ss_pred ccccCCCChhHHHHHHHHHHHHhCCC-CcccccccceEEEEEEeecCCceeec---C------CC-CCCCCCCCCCCCCc
Q 009635 410 AEEWISCSDSEIIDATMKELAKLFPD-EISADQSKAKIVKYHVVKTPRSVYKT---I------PN-CEPCRPLQRSPVEG 478 (530)
Q Consensus 410 ~~~~~~~~~e~~~~~~~~~l~~~~p~-~~~~~~~~~~~~~~~~~~~p~~~~~~---~------~~-~~~~~~~~~~~~~~ 478 (530)
...|..++++++++.++++|++++|. .... . ......+|...|+....+ . ++ .....+.+++|.+|
T Consensus 376 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~-~--~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 452 (489)
T 2jae_A 376 QEAFESLTHRQRLAKAIAEGSEIHGEKYTRD-I--SSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDK 452 (489)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHCGGGGSS-E--EEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTT
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHcCcchhhh-c--cccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCc
Confidence 35577889999999999999999986 2211 1 112233455555532222 1 33 11123345678899
Q ss_pred eEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhh
Q 009635 479 FYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 514 (530)
Q Consensus 479 l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~ 514 (530)
|||||++++. +.++++||+.||++||++|++.++.
T Consensus 453 l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 453 IYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp EEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999864 4589999999999999999987653
No 17
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=2e-33 Score=290.73 Aligned_cols=421 Identities=16% Similarity=0.173 Sum_probs=235.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-CcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCc-chHHHHHHHcCCCCC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAY-PNIQNLFGELGINDR 133 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G-~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~-~~~~~l~~~lg~~~~ 133 (530)
..+||||||||++||+||+.|+++| ++|+|||+++++||++.+....+|+.+|.|++++.+.. ..+.+++.++++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~ 86 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDG 86 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCc
Confidence 4579999999999999999999999 99999999999999998866336899999999997653 346666777775211
Q ss_pred ---cceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHH
Q 009635 134 ---LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (530)
Q Consensus 134 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (530)
..+....... +...... ....... .+..+. .......... ... ....++.++.
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~---~~~~~~------------~~~~~~~~~~--~~~-~~~~~d~s~~ 142 (516)
T 1rsg_A 87 RTRFVFDDDNFIY-IDEERGR-----VDHDKEL---LLEIVD------------NEMSKFAELE--FHQ-HLGVSDCSFF 142 (516)
T ss_dssp CCCEECCCCCCEE-EETTTEE-----CTTCTTT---CHHHHH------------HHHHHHHHHH--C--------CCBHH
T ss_pred ceeEEECCCCEEE-EcCCCcc-----ccccHHH---HHHHHH------------HHHHHHHHHH--hhh-ccCCCCCCHH
Confidence 1111111100 0000000 0000000 011110 0000000000 000 0112346777
Q ss_pred HHHHHc------CCCHHHHHHHHHHHHh---hcccCCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccchHHHHHH
Q 009635 211 EWMRKQ------GVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (530)
Q Consensus 211 ~~l~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~ 281 (530)
+++.+. .+... ...++..+.. ...+.+++.++..... ....+. ..++.| +..+++.|++.
T Consensus 143 ~~l~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~g~~~~~~s~~~~~-------~~~~~~-~~~~~g--~~~l~~~l~~~ 211 (516)
T 1rsg_A 143 QLVMKYLLQRRQFLTND-QIRYLPQLCRYLELWHGLDWKLLSAKDTY-------FGHQGR-NAFALN--YDSVVQRIAQS 211 (516)
T ss_dssp HHHHHHHHHHGGGSCHH-HHHHHHHHHGGGHHHHTBCTTTSBHHHHC-------CCCSSC-CEEESC--HHHHHHHHHTT
T ss_pred HHHHHHHHHhhcccCHH-HHHHHHHHHHHHHHHhCCChHHCChHHHH-------hhccCc-chhhhC--HHHHHHHHHHh
Confidence 776542 11111 1112222221 1234456666654321 111222 223433 45555555554
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhh-----------CCccccccHHHHHHhc
Q 009635 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ-----------LPENWKEMAYFKRLEK 350 (530)
Q Consensus 282 l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l-----------l~~~~~~~~~~~~l~~ 350 (530)
+. +++|++|++|++|..++++. +.|++.+|++++||+||+|+|+..+... .-.+..+..+.+++++
T Consensus 212 l~--~~~i~~~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~ 288 (516)
T 1rsg_A 212 FP--QNWLKLSCEVKSITREPSKN-VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDK 288 (516)
T ss_dssp SC--GGGEETTCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTS
T ss_pred CC--CCEEEECCEEEEEEEcCCCe-EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHh
Confidence 43 26799999999999742333 4688999988999999999999988642 1111235567788999
Q ss_pred cCCccEEEEEEEecccccccc-Ccccc-cc--CCcceeeeccC--------------------c--ccc----c-ccCCC
Q 009635 351 LVGVPVINIHIWFDRKLKNTY-DHLLF-SR--SSLLSVYADMS--------------------L--TCK----E-YYNPN 399 (530)
Q Consensus 351 ~~~~~~~~v~~~~~~~~~~~~-~~~~~-~~--~~~~~~~~~~s--------------------~--~~~----~-~~~~~ 399 (530)
+.+.++.||++.|+++||+.. +.+.. .. +++...+.... . ..+ . +...+
T Consensus 289 ~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (516)
T 1rsg_A 289 IHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTG 368 (516)
T ss_dssp SCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTS
T ss_pred CCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCC
Confidence 999999999999999999753 22211 11 01110000000 0 000 0 11233
Q ss_pred ccEEEEEe-eCc-cccCCC--ChhHHHHH---HHHHHHHhCCC------Ccccc-------cccceEEEEEEeecCCc--
Q 009635 400 QSMLELVF-APA-EEWISC--SDSEIIDA---TMKELAKLFPD------EISAD-------QSKAKIVKYHVVKTPRS-- 457 (530)
Q Consensus 400 ~~v~~~~~-~~~-~~~~~~--~~e~~~~~---~~~~l~~~~p~------~~~~~-------~~~~~~~~~~~~~~p~~-- 457 (530)
..++..+. .+. ..+..+ +++++.+. ++++|.+++|. ...+. +....+...+|...|++
T Consensus 369 ~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~G 448 (516)
T 1rsg_A 369 VASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRG 448 (516)
T ss_dssp CSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTT
T ss_pred CcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCc
Confidence 44444333 332 334555 77777654 66777777752 11110 11113455566666664
Q ss_pred eeec-CCCCCCC--CCCCC-CCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhh
Q 009635 458 VYKT-IPNCEPC--RPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 514 (530)
Q Consensus 458 ~~~~-~~~~~~~--~~~~~-~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~ 514 (530)
.|.+ .+|.... ...+. .+.++|||||++++..|+|+|+||++||++||++|++.++.
T Consensus 449 sys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 449 AYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp CCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHG
T ss_pred cCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhh
Confidence 4543 3343211 11122 36789999999999888899999999999999999998765
No 18
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=2.7e-32 Score=290.06 Aligned_cols=410 Identities=20% Similarity=0.236 Sum_probs=238.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcch-HHHHHHHcCCCCC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPN-IQNLFGELGINDR 133 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~-~~~l~~~lg~~~~ 133 (530)
...+||+|||||++||+||+.|++.|++|+|+|+++++||++.+....+|+.+|.|++++.+...+ +..+.+++|++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 346899999999999999999999999999999999999999987666799999999999765544 7788899998643
Q ss_pred cceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCccc-----
Q 009635 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT----- 208 (530)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----- 208 (530)
...... .++. ..+.. .. ......... .+............ .. ....+.+
T Consensus 414 ~~~~~~-~l~~---~~g~~---------~~--~~~~~~~~~----~~~~ll~~~~~~~~---~~----~~~~d~sl~~~~ 467 (776)
T 4gut_A 414 KFGERC-DLIQ---EGGRI---------TD--PTIDKRMDF----HFNALLDVVSEWRK---DK----TQLQDVPLGEKI 467 (776)
T ss_dssp ECCSCC-CEEC---TTSCB---------CC--HHHHHHHHH----HHHHHHHHHHHHGG---GC----CGGGCCBHHHHH
T ss_pred cccccc-ceEc---cCCcc---------cc--hhHHHHHHH----HHHHHHHHHHHHhh---cc----cccccccHHHHH
Confidence 211110 0110 01110 00 000000000 00000000000000 00 0001122
Q ss_pred ---HHHHHHHcCCCHHHHHH-HH---HHHHhhcccCCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccchHHHHHH
Q 009635 209 ---VQEWMRKQGVPDRVTTE-VF---IAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (530)
Q Consensus 209 ---~~~~l~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~ 281 (530)
+.++++..++.....+. .+ ........+.....++...... ...+ ...+....++.+| ...+++.+.
T Consensus 468 ~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~--~~~~-~~~~G~~~~~~~G-~~~l~~aLa-- 541 (776)
T 4gut_A 468 EEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDH--NEFF-AQFAGDHTLLTPG-YSVIIEKLA-- 541 (776)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTG--GGGS-CCCCSCEEECTTC-THHHHHHHH--
T ss_pred HHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhh--hhhH-HhcCCCeEEECCh-HHHHHHHHH--
Confidence 33444444432211111 00 0000111112222222210000 0000 1122233344444 344444443
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhC--CccccccHHHHHHhccCCccEEEE
Q 009635 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL--PENWKEMAYFKRLEKLVGVPVINI 359 (530)
Q Consensus 282 l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll--~~~~~~~~~~~~l~~~~~~~~~~v 359 (530)
.|++|+++++|++|..++++ + .|++.+|+++.||+||+|+|+..+.... ..+..+.....+++++.+.++.|+
T Consensus 542 ---~gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV 616 (776)
T 4gut_A 542 ---EGLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKI 616 (776)
T ss_dssp ---TTSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEE
T ss_pred ---hCCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEE
Confidence 37899999999999985444 3 5888999889999999999999987521 222334566788889999999999
Q ss_pred EEEecccccccc----Ccccc--c---cCCcceeeeccCcccccccCCC-ccEEEEEeeC--ccccCCCChhHHHHHHHH
Q 009635 360 HIWFDRKLKNTY----DHLLF--S---RSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMK 427 (530)
Q Consensus 360 ~~~~~~~~~~~~----~~~~~--~---~~~~~~~~~~~s~~~~~~~~~~-~~v~~~~~~~--~~~~~~~~~e~~~~~~~~ 427 (530)
++.|+++||+.. +.+.. . ...+..++.+. .+.+ ..++..++.+ +..+..++++++++.+++
T Consensus 617 ~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~-------~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~ 689 (776)
T 4gut_A 617 ALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDM-------DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMA 689 (776)
T ss_dssp EEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEES-------CTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHH
T ss_pred EEecCcccccccCCCCceEEeecCCcCCCceEEEEecC-------CCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHH
Confidence 999999999642 11111 1 11222222222 2233 3455444443 355778899999999999
Q ss_pred HHHHhCCCCcccccccceEEEEEEeecCCc--eeecC-CCCC-CCCCCCCCC-CCceEEecccccCCCCCcHHHHHHHHH
Q 009635 428 ELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKTI-PNCE-PCRPLQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGK 502 (530)
Q Consensus 428 ~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~~~-~~~~-~~~~~~~~~-~~~l~~aG~~~~~~~~~~i~gA~~sg~ 502 (530)
+|.++||....+.+ ..+...+|...|++ .|.+. ++.. .....+..| .++|||||++++..|+|+|+||++||+
T Consensus 690 ~L~~ifg~~~~~~P--~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~ 767 (776)
T 4gut_A 690 TLRELFKEQEVPDP--TKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGV 767 (776)
T ss_dssp HHHHHTTTSCCCCC--SEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHH
T ss_pred HHHHHhCcccccCc--ceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHH
Confidence 99999986332222 23344455555653 44432 2321 111223445 479999999999888899999999999
Q ss_pred HHHHHHHH
Q 009635 503 LCAQAIVQ 510 (530)
Q Consensus 503 ~aA~~vl~ 510 (530)
+||++|++
T Consensus 768 RaA~~Ila 775 (776)
T 4gut_A 768 REASKIAA 775 (776)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99999985
No 19
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=100.00 E-value=9.1e-32 Score=274.68 Aligned_cols=415 Identities=15% Similarity=0.153 Sum_probs=272.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-CcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G-~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (530)
..+||+|||||++||+||++|+++| .+|+|+|+++++||++.+....+|+.+|.|++++...++.+.++++++. +...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~~ 86 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGWN 86 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhhh
Confidence 5689999999999999999999998 7999999999999999986446899999999999887788889999874 2211
Q ss_pred ceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHHH
Q 009635 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (530)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (530)
.......++ . .+.+..+.+...+ ..++.....+....+..... .....++.++.+|+.
T Consensus 87 ~~~~~~~~~-~---~g~~~~~P~~~~~--------------~~l~~~~~~~~~~~ll~~~~----~~~~~~~~s~~e~~~ 144 (484)
T 4dsg_A 87 VLQRESWVW-V---RGRWVPYPFQNNI--------------HRLPEQDRKRCLDELVRSHA----RTYTEPPNNFEESFT 144 (484)
T ss_dssp EEECCCEEE-E---TTEEEESSGGGCG--------------GGSCHHHHHHHHHHHHHHHH----CCCSSCCSSHHHHHH
T ss_pred hccCceEEE-E---CCEEEEeCccchh--------------hhCCHHHHHHHHHHHHHHHh----ccCCCCCCCHHHHHH
Confidence 111111111 1 1222211111100 01112222222222221100 012235689999998
Q ss_pred HcCCCHHHHHHHHHHHHhhcccCCCCcccHHHH---------HHHHHHHHhhc------cCCeEEeec-CCCCccchHHH
Q 009635 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCI---------LIALNRFLQEK------HGSKMAFLD-GNPPERLCLPI 278 (530)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~------~g~~~~~~~-gg~~~~l~~~l 278 (530)
+. +..++.+.++.++..++|+.++++++.... ...+...+... ....+.|+. || +..++++|
T Consensus 145 ~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG-~~~l~~~l 222 (484)
T 4dsg_A 145 RQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGG-TGIIYQAI 222 (484)
T ss_dssp HH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSC-THHHHHHH
T ss_pred HH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCC-HHHHHHHH
Confidence 86 566777778888888888888888765321 11122222211 122345554 45 88999999
Q ss_pred HHHHHHcCcEEEec--ceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCc--cccccHHHHHHhccCCc
Q 009635 279 VEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGV 354 (530)
Q Consensus 279 ~~~l~~~g~~i~~~--t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~--~~~~~~~~~~l~~~~~~ 354 (530)
++.+.+. +|+++ ++|++|..+ ++ +|++.+|+++.||+||+|+|++.+.+++.+ ...+....+.+..+.+.
T Consensus 223 a~~l~~~--~i~~~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~ 296 (484)
T 4dsg_A 223 KEKLPSE--KLTFNSGFQAIAIDAD-AK---TITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYS 296 (484)
T ss_dssp HHHSCGG--GEEECGGGCEEEEETT-TT---EEEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEE
T ss_pred HhhhhhC--eEEECCCceeEEEEec-CC---EEEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcC
Confidence 9887542 78999 569999874 44 255688889999999999999999999854 12344566778899999
Q ss_pred cEEEEEEEecccccc---ccCccccccCCc-ceeeeccCcccccccCCCccEEEEEeeCccccCCCChhHHHHHHHHHHH
Q 009635 355 PVINIHIWFDRKLKN---TYDHLLFSRSSL-LSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 430 (530)
Q Consensus 355 ~~~~v~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~ 430 (530)
++.++.+.|+++... +...+.+++... ...+...++.+++.+|+++.++.+.+.....| ..++|++++.++++|.
T Consensus 297 s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~-~~~d~~l~~~a~~~L~ 375 (484)
T 4dsg_A 297 STNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESKYK-PVNHSTLIEDCIVGCL 375 (484)
T ss_dssp EEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTB-CCCTTSHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecCcCC-cCCHHHHHHHHHHHHH
Confidence 999999999987432 112233333222 22233445566777788877776655444334 6789999999999999
Q ss_pred HhCCCCcccccccceEEEEEEeecCCceeecCCCCCC----CCCCCCCCCCceEEecccccCCCC-CcHHHHHHHHHHHH
Q 009635 431 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCA 505 (530)
Q Consensus 431 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~-~~i~gA~~sg~~aA 505 (530)
++.+.... ..+......+|+.+.+.+.++... .+..+. .. ||+++|......|. .++++|+.+|++||
T Consensus 376 ~~~~~~~~-----~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~-~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa 448 (484)
T 4dsg_A 376 ASNLLLPE-----DLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELM-SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAI 448 (484)
T ss_dssp HTTSCCTT-----CCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH-HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHH
T ss_pred HcCCCCcc-----ceEEEEEEEEeCccccCCCccHHHHHHHHHHHHH-hC-CcEeecCCcccccCCCChHHHHHHHHHHH
Confidence 98542111 123434566788887777766321 112122 23 89999997666541 36999999999999
Q ss_pred HHHH
Q 009635 506 QAIV 509 (530)
Q Consensus 506 ~~vl 509 (530)
++|+
T Consensus 449 ~~i~ 452 (484)
T 4dsg_A 449 DHVL 452 (484)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9998
No 20
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.97 E-value=5.4e-30 Score=273.83 Aligned_cols=242 Identities=18% Similarity=0.216 Sum_probs=159.8
Q ss_pred eecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC------CcEEecCEEEEccChHHHhhhCC--
Q 009635 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQLP-- 336 (530)
Q Consensus 265 ~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~------G~~i~ad~VI~a~~~~~~~~ll~-- 336 (530)
.+.|| ++.|+++|.+ +++|++|++|++|..++++ +.|++.+ |++++||+||+|+|...+..++.
T Consensus 566 ~~~gG-~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g--V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I 637 (852)
T 2xag_A 566 TVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASG--CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 637 (852)
T ss_dssp EETTC-TTHHHHHHTT-----TCCEECSEEEEEEEEETTE--EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred EecCc-HHHHHHHHHh-----CCCEEeCCeEEEEEEcCCc--EEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhccc
Confidence 34454 6777776664 4689999999999986554 3566654 56899999999999999987431
Q ss_pred --ccccccHHHHHHhccCCccEEEEEEEecccccccc-Ccccc--c-c--CCcceeeeccCcccccccCCCccEEEEEee
Q 009635 337 --ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLF--S-R--SSLLSVYADMSLTCKEYYNPNQSMLELVFA 408 (530)
Q Consensus 337 --~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~-~~~~~--~-~--~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~ 408 (530)
.+..+....++++++.+.++.||++.|+++||+.. +.+.+ . . .....++++.+ +..++..++.
T Consensus 638 ~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---------~~pvLl~~v~ 708 (852)
T 2xag_A 638 QFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---------KAPILLALVA 708 (852)
T ss_dssp EEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---------SSSEEEEEEC
T ss_pred ccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---------CCCEEEEEec
Confidence 22234456678899999999999999999999742 21111 1 1 11222222211 1224444333
Q ss_pred C--ccccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCc--eeec-CCCCCC--------------CC
Q 009635 409 P--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKT-IPNCEP--------------CR 469 (530)
Q Consensus 409 ~--~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~~-~~~~~~--------------~~ 469 (530)
+ +..+..++++++++.++++|.++||......+ ..+...+|...|++ .|.+ .++... .+
T Consensus 709 G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P--~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~ 786 (852)
T 2xag_A 709 GEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQP--KETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSI 786 (852)
T ss_dssp HHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCC--SEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSS
T ss_pred CcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCc--eEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcccccccc
Confidence 2 35567889999999999999999986332221 22333445555553 4543 234211 01
Q ss_pred CCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhhHhhhcccchhh
Q 009635 470 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAE 525 (530)
Q Consensus 470 ~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~~~~~~~~~~~~ 525 (530)
+...++.++|||||++++..|+|+++||++||++||++|++.+......+..+-.|
T Consensus 787 p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~~~~~~~~~ 842 (852)
T 2xag_A 787 PGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATP 842 (852)
T ss_dssp TTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGGGC------
T ss_pred ccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 22345678999999999988889999999999999999999998777666655544
No 21
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.97 E-value=1.5e-30 Score=270.38 Aligned_cols=449 Identities=13% Similarity=0.091 Sum_probs=252.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--------CcEEEEecCc-cc----------------CceeeeeecC------CCC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAG--------HKPLLLEARD-VL----------------GGKIAAWKDG------DGD 105 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G--------~~V~vlEa~~-~~----------------GG~~~~~~~~------~g~ 105 (530)
.++|+|||||++||+||+.|++.| ++|+|+|+++ ++ ||++.+.... ++.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~ 135 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDT 135 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCc
Confidence 479999999999999999999998 9999999999 99 9999886542 468
Q ss_pred EEeeeeceecCCcchHHHHHHHc-CCCCC--cceec--cceeeecCC----CCCCc-ccccCCCC-CCCchhhHHHHHhc
Q 009635 106 WYETGLHIFFGAYPNIQNLFGEL-GINDR--LQWKE--HSMIFAMPN----KPGEF-SRFDFPEV-LPAPLNGILAILRN 174 (530)
Q Consensus 106 ~~d~G~~~~~~~~~~~~~l~~~l-g~~~~--~~~~~--~~~~~~~~~----~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 174 (530)
.+|.|++++......+.++++++ |+... ..... ....+...+ ..+.. ..+..... .+..+..+...+..
T Consensus 136 ~~e~G~~~~~~~~~~~~~~~~~l~gl~~~~~~~~~~~~~~~~i~~~~~i~~~~g~~~~~~~~~~~p~p~~~~~v~~~~~~ 215 (721)
T 3ayj_A 136 IYEVGAMRFPEIAGLTWHYASAAFGDAAPIKVFPNPGKVPTEFVFGNRVDRYVGSDPKDWEDPDSPTLKVLGVVAGGLVG 215 (721)
T ss_dssp EEECSCCCEETTCHHHHHHHHHHHCTTCBCCBCCCBTTBCEEEEETTEEEEESSSCGGGBSSTTCHHHHHHHHHHHHHTC
T ss_pred EEecCCEEecCccHHHHHHHHHhcCCcccccccccCCCCceEEEecCceeeecCccceecccccccCHHHHHHHHHHHHH
Confidence 99999999988888889999999 98621 11111 111220000 00111 11100000 00011111111110
Q ss_pred ccC------CCh----HHHHHhhh--------------h-----hhhh------hhcCcccc-cccCcccH---HHHHHH
Q 009635 175 NEM------LTW----PEKVKFAI--------------G-----LLPA------IIGGQAYV-EAQDGLTV---QEWMRK 215 (530)
Q Consensus 175 ~~~------~~~----~~~~~~~~--------------~-----~~~~------~~~~~~~~-~~~~~~s~---~~~l~~ 215 (530)
... ... ..++..+. . .+.. ...+...+ .+++..|+ .+|++.
T Consensus 216 ~~~e~~~~~~~~~~~~p~~v~~ll~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~w~~lla~~~d~~S~~~~~~~L~~ 295 (721)
T 3ayj_A 216 NPQGENVAMYPIANVDPAKIAAILNAATPPADALERIQTKYWPEFIAQYDGLTLGAAVREIVTVAFEKGTLPPVDGVLDV 295 (721)
T ss_dssp CSSSSCCCSSCBTTBCHHHHHHHHTCSSCCHHHHHHHHHTHHHHHHHHHTTBBHHHHHHHHHHHHHHHTSSCCGGGTSCH
T ss_pred HhhhcccccccccccchhhHHHHHHhhhcchhhhhhhhhhhhhhhhhhhccchhhhHHHHHHHHhhcccchhHHHHHHHh
Confidence 000 000 00000000 0 0000 00000001 12222333 333321
Q ss_pred cCCCHHHH--HHHHHHHHhhccc-CCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccchHHHHHHHHHcCcEEEec
Q 009635 216 QGVPDRVT--TEVFIAMSKALNF-INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 292 (530)
Q Consensus 216 ~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~ 292 (530)
. ..+. ...+..+.....+ .+....+....+... + ...+..+..+.|| .+.|+++|++.+.+ |..|+++
T Consensus 296 ~---~~~s~~~~~~~~~~~~~gg~~~~~~~S~le~L~~~---~-~~~~~~~~~i~GG-~~~L~~aLa~~l~~-g~~I~l~ 366 (721)
T 3ayj_A 296 D---ESISYYVELFGRFGFGTGGFKPLYNISLVEMMRLI---L-WDYSNEYTLPVTE-NVEFIRNLFLKAQN-VGAGKLV 366 (721)
T ss_dssp H---HHHHHHHHHHHHHCSSSSCCGGGTTBBHHHHHHHH---H-TTTTCEECCSSSS-THHHHHHHHHHHHH-HTTTSEE
T ss_pred c---cccHHHHHHHHHHhhccCCCCCccchhHHHHHHHH---h-cCCccceeEECCc-HHHHHHHHHHhccc-CCceEeC
Confidence 0 0111 1111111111111 123355555443322 1 2234556666776 79999999998753 5678899
Q ss_pred ceee--EEEecCCC-----CEEEE-EEcCCc--EEecCEEEEccChHHHhh------hC-------C-------------
Q 009635 293 SRVQ--KIELNDDG-----TVKNF-LLTNGN--VIDGDAYVFATPVDILKL------QL-------P------------- 336 (530)
Q Consensus 293 t~V~--~I~~~~~g-----~~~~v-~~~~G~--~i~ad~VI~a~~~~~~~~------ll-------~------------- 336 (530)
++|+ +|..++++ ..+.| .+.+|+ +++||+||+|+|...+.. +- .
T Consensus 367 ~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~ 446 (721)
T 3ayj_A 367 VQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQ 446 (721)
T ss_dssp EEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEE
T ss_pred CEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccc
Confidence 9999 99875444 12456 456676 799999999999988753 21 1
Q ss_pred --cccc-c-------cHHHHHHhccCCccEEEEEEEe-----ccccccccCc----cccccCCcceeeeccCcccccccC
Q 009635 337 --ENWK-E-------MAYFKRLEKLVGVPVINIHIWF-----DRKLKNTYDH----LLFSRSSLLSVYADMSLTCKEYYN 397 (530)
Q Consensus 337 --~~~~-~-------~~~~~~l~~~~~~~~~~v~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~s~~~~~~~~ 397 (530)
++.. + .....+++++++.+..||++.| +++||+...+ ..+++.+...++...+....++.+
T Consensus 447 ~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~ 526 (721)
T 3ayj_A 447 VYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQA 526 (721)
T ss_dssp EBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC----C
T ss_pred cCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCCCcceEEEeccCcccccCC
Confidence 1112 4 5677889999999999999999 9999976521 234555554443311111112334
Q ss_pred CCccEEEEEee--C-cccc------CCCChhHH-------HHHHHHHHH--HhCCCCcc----------cccccceEEEE
Q 009635 398 PNQSMLELVFA--P-AEEW------ISCSDSEI-------IDATMKELA--KLFPDEIS----------ADQSKAKIVKY 449 (530)
Q Consensus 398 ~~~~v~~~~~~--~-~~~~------~~~~~e~~-------~~~~~~~l~--~~~p~~~~----------~~~~~~~~~~~ 449 (530)
++..++...|. + +..| ..+++++. ++.++++|. +++|+... ..........+
T Consensus 527 ~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 606 (721)
T 3ayj_A 527 PEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVF 606 (721)
T ss_dssp CSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEE
T ss_pred CCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEE
Confidence 45554444333 2 3445 34444444 999999999 88886320 00001234566
Q ss_pred EEeecCCce--e-ecCCCC-------CCCC--CCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhhHh
Q 009635 450 HVVKTPRSV--Y-KTIPNC-------EPCR--PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 516 (530)
Q Consensus 450 ~~~~~p~~~--~-~~~~~~-------~~~~--~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~~~ 516 (530)
.|...| +. | .+.|+. ..+. .....+.++||||||+++. +.||+|||+.||++||.+|+..+++..
T Consensus 607 dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~ 683 (721)
T 3ayj_A 607 DWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRANRGD 683 (721)
T ss_dssp EGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhcCCC
Confidence 777777 43 2 223443 1111 1234467899999999985 578999999999999999999987643
No 22
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.97 E-value=1e-29 Score=269.05 Aligned_cols=231 Identities=19% Similarity=0.225 Sum_probs=153.8
Q ss_pred eecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC------CcEEecCEEEEccChHHHhhhC---
Q 009635 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL--- 335 (530)
Q Consensus 265 ~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~------G~~i~ad~VI~a~~~~~~~~ll--- 335 (530)
.+.|| ++.|+++|.+ +++|++|++|++|..++++ +.|++.+ |++++||+||+|+|...+..+.
T Consensus 395 ~~~gG-~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~--v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i 466 (662)
T 2z3y_A 395 TVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASG--CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 466 (662)
T ss_dssp EETTC-TTHHHHHHTT-----TCEEETTEEEEEEEEETTE--EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred eecCc-HHHHHHHHHh-----cCceecCCeEEEEEECCCc--EEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCce
Confidence 33444 6777766664 5689999999999986555 3577655 5689999999999999998742
Q ss_pred -CccccccHHHHHHhccCCccEEEEEEEecccccccc-Ccccc--c-cC--CcceeeeccCcccccccCCCccEEEEEee
Q 009635 336 -PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLF--S-RS--SLLSVYADMSLTCKEYYNPNQSMLELVFA 408 (530)
Q Consensus 336 -~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~-~~~~~--~-~~--~~~~~~~~~s~~~~~~~~~~~~v~~~~~~ 408 (530)
..+..+....++++++.+.++.||++.|+++||+.. +.+.+ + .. .....+++.+ +..++..++.
T Consensus 467 ~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---------~~~vL~~~~~ 537 (662)
T 2z3y_A 467 QFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---------KAPILLALVA 537 (662)
T ss_dssp EEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---------SSSEEEEEEC
T ss_pred EEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---------CCCEEEEEec
Confidence 122334556778999999999999999999999742 21111 1 11 1122222211 2234444443
Q ss_pred C--ccccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCc--eeec-CCCCCC--------------CC
Q 009635 409 P--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKT-IPNCEP--------------CR 469 (530)
Q Consensus 409 ~--~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~~-~~~~~~--------------~~ 469 (530)
+ +..+..++++++++.++++|+++||....+.+ ..+...+|...|++ .|.+ .++... .+
T Consensus 538 G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p--~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~ 615 (662)
T 2z3y_A 538 GEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQP--KETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSI 615 (662)
T ss_dssp THHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCC--SEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC----
T ss_pred cHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCC--ceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccc
Confidence 3 25567889999999999999999986332221 22333445555553 4543 233211 01
Q ss_pred CCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhh
Q 009635 470 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 514 (530)
Q Consensus 470 ~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~ 514 (530)
+...++.++|||||++++..|+|+++||++||++||++|++.+..
T Consensus 616 ~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 616 PGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp -----CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 223456789999999999888899999999999999999998764
No 23
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.97 E-value=9e-29 Score=242.43 Aligned_cols=222 Identities=14% Similarity=0.130 Sum_probs=154.0
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCcc--ccccHHHHHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN--WKEMAYFKRL 348 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~--~~~~~~~~~l 348 (530)
...+++.+.+.+ |++|+++++|++|..++++ + .|++.+|+++.||+||+|+|++.+..|+++. ..+......+
T Consensus 111 ~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l 185 (342)
T 3qj4_A 111 ISSIIKHYLKES---GAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQL 185 (342)
T ss_dssp TTHHHHHHHHHH---TCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHH
Confidence 567777777655 8999999999999985544 3 5888888779999999999999999998753 2334567889
Q ss_pred hccCCccEEEEEEEeccccccc--cCccccccCCccee-eeccCccccccc-CCCccEEEEEeeC--ccccCCCChhHHH
Q 009635 349 EKLVGVPVINIHIWFDRKLKNT--YDHLLFSRSSLLSV-YADMSLTCKEYY-NPNQSMLELVFAP--AEEWISCSDSEII 422 (530)
Q Consensus 349 ~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~s~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~e~~~ 422 (530)
.++.+.++.++.+.|++++|.. +..+..++.+...+ +.+.+ . +... +++..++....++ ...+...++|+++
T Consensus 186 ~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-k-~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 263 (342)
T 3qj4_A 186 EAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNK-K-RNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQ 263 (342)
T ss_dssp HTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHH-H-TTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHH
T ss_pred hcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEcccc-C-CCCCCCCCCceEEEECCHHHHHHhhcCCHHHHH
Confidence 9999999999999999887643 33444444443333 33322 1 2211 2222233332222 2446678899999
Q ss_pred HHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCCCCCC--CCCCceEEecccccCCCCCcHHHHHHH
Q 009635 423 DATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR--SPVEGFYLAGDYTKQKYLASMEGAVLS 500 (530)
Q Consensus 423 ~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~l~~aG~~~~~~~~~~i~gA~~s 500 (530)
+.++++|.+++|.... +..+...+|.++.+.+... .++... ...++|++||||+.. +++|+|+.|
T Consensus 264 ~~~~~~l~~~~g~~~~-------p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g---~~v~~ai~s 330 (342)
T 3qj4_A 264 ELVFQQLENILPGLPQ-------PIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ---SNFDGCITS 330 (342)
T ss_dssp HHHHHHHHHHSCSCCC-------CSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC---SSHHHHHHH
T ss_pred HHHHHHHHHhccCCCC-------CceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC---CCccHHHHH
Confidence 9999999999984322 2345567888877654321 112212 356899999999986 699999999
Q ss_pred HHHHHHHHHHhh
Q 009635 501 GKLCAQAIVQDY 512 (530)
Q Consensus 501 g~~aA~~vl~~~ 512 (530)
|++||++|++.|
T Consensus 331 g~~aa~~i~~~l 342 (342)
T 3qj4_A 331 ALCVLEALKNYI 342 (342)
T ss_dssp HHHHHHHHTTC-
T ss_pred HHHHHHHHHhhC
Confidence 999999998754
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.96 E-value=6.3e-28 Score=243.76 Aligned_cols=409 Identities=15% Similarity=0.151 Sum_probs=227.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCC-CcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G-~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (530)
+.++||+|||||++||+||+.|+++| ++|+|+|+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+...
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCccc
Confidence 35689999999999999999999999 89999999999999999876 47899999999988777889999999998643
Q ss_pred cceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCc--ccccccCcccHHH
Q 009635 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ--AYVEAQDGLTVQE 211 (530)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~ 211 (530)
.. .....+ ...++... ... ..+.....+...+.. +... ............ .........++.+
T Consensus 83 ~~--~~~~~~--~~~~g~~~-~~~--~~~~~~~~~~~~~~~-----l~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~ 147 (424)
T 2b9w_A 83 GP--KLRREF--LHEDGEIY-VPE--KDPVRGPQVMAAVQK-----LGQL---LATKYQGYDANGHYNKVHEDLMLPFDE 147 (424)
T ss_dssp SC--CCCEEE--ECTTSCEE-CGG--GCTTHHHHHHHHHHH-----HHHH---HHTTTTTTTSSSSSSCCCGGGGSBHHH
T ss_pred cc--ccccee--EcCCCCEe-ccc--cCcccchhHHHHHHH-----HHHH---HhhhhhhcccccchhhhhhhhccCHHH
Confidence 21 111111 11122111 000 001100001000000 0000 000000000000 0011234589999
Q ss_pred HHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHH--HHHhhccCCeEEeecCCCCccchHHHHHHHHHcCcEE
Q 009635 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALN--RFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 289 (530)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i 289 (530)
|+++.+.+ .+.+.+..++....+ .++.++++...+..+. .......+..+. +.+| ...+++.+.+.+ +.+|
T Consensus 148 ~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~g-~~~l~~~l~~~l---~~~v 220 (424)
T 2b9w_A 148 FLALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGDLWT-WADG-TQAMFEHLNATL---EHPA 220 (424)
T ss_dssp HHHHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTCCBC-CTTC-HHHHHHHHHHHS---SSCC
T ss_pred HHHhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCceEE-eCCh-HHHHHHHHHHhh---cceE
Confidence 99998765 355544444444444 3567777765432211 111112233343 3444 577777776655 4678
Q ss_pred EecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEecccccc
Q 009635 290 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN 369 (530)
Q Consensus 290 ~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~ 369 (530)
++|++|++|..+ ++.+ .|++.+| +++||+||+|+|++.+..+++... ...+.+.++.+.++. +.+.+.+.++.
T Consensus 221 ~~~~~V~~i~~~-~~~v-~v~~~~g-~~~ad~Vv~a~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~ 293 (424)
T 2b9w_A 221 ERNVDITRITRE-DGKV-HIHTTDW-DRESDVLVLTVPLEKFLDYSDADD---DEREYFSKIIHQQYM-VDACLVKEYPT 293 (424)
T ss_dssp BCSCCEEEEECC-TTCE-EEEESSC-EEEESEEEECSCHHHHTTSBCCCH---HHHHHHTTCEEEEEE-EEEEEESSCCS
T ss_pred EcCCEEEEEEEE-CCEE-EEEECCC-eEEcCEEEECCCHHHHhhccCCCH---HHHHHHhcCCcceeE-EEEEEeccCCc
Confidence 999999999975 4444 4888888 599999999999998877776421 122334555554433 22233333321
Q ss_pred ccCcccccc-CC-cc--eeeeccCcccccccCCCccE-EEEEeeCccccCCCChhHHHHHHHHHHHHhCCCCcccccccc
Q 009635 370 TYDHLLFSR-SS-LL--SVYADMSLTCKEYYNPNQSM-LELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKA 444 (530)
Q Consensus 370 ~~~~~~~~~-~~-~~--~~~~~~s~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~ 444 (530)
+..+...+ .+ .. .++.+.. ..++...+ +.+.......+...+++++++.+++.|.+ ++.....
T Consensus 294 -~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~-l~~~~~~----- 361 (424)
T 2b9w_A 294 -ISGYVPDNMRPERLGHVMVYYHR-----WADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMET-FGHPVEK----- 361 (424)
T ss_dssp -SEEECGGGGSGGGTTSCCEEEEC-----CTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHH-TTCCEEE-----
T ss_pred -ccccccCCCCCcCCCcceEEeee-----cCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHH-cCCcccc-----
Confidence 11111111 01 11 1111111 11112233 33333344556677889999999999998 5431110
Q ss_pred eEEEEEEeecCC-ceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHH
Q 009635 445 KIVKYHVVKTPR-SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 509 (530)
Q Consensus 445 ~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl 509 (530)
.+....|...|. +...+..|... +....++.+|+||||+++.. |.+|+|+.||++||++|+
T Consensus 362 ~~~~~~w~~~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 362 IIEEQTWYYFPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EEEEEEEEEEEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred cccccceeeeeccCHHHHhccHHH-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 111122222221 00011111100 01113345799999998874 789999999999999885
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.94 E-value=6.2e-25 Score=214.75 Aligned_cols=326 Identities=17% Similarity=0.219 Sum_probs=202.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCCCc-c
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL-Q 135 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~-~ 135 (530)
++||+|||||++|+++|+.|++.|.+|+|||++..+||++.+.. ..+..++.|...+......+.++++++...... .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe-cCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 46999999999999999999999999999999999999887644 356677888777765555555555443211000 0
Q ss_pred eeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHHHH
Q 009635 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (530)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (530)
+.. .+. .....
T Consensus 81 ~~~------------~~~-------------------------------------------------~~~~~-------- 91 (336)
T 1yvv_A 81 WTP------------LLY-------------------------------------------------NFHAG-------- 91 (336)
T ss_dssp ECC------------CEE-------------------------------------------------EESSS--------
T ss_pred ccc------------cce-------------------------------------------------eccCc--------
Confidence 000 000 00000
Q ss_pred cCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhhccCCeEEeecCCCCccchHHHHHHHHHcCcEEEeccee
Q 009635 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (530)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V 295 (530)
. ..... .+. ..+.. ..-...+.+.+.+ |++|+++++|
T Consensus 92 -----~---------------~~~~~-----------------~~~-~~~~~----~~~~~~l~~~l~~-g~~i~~~~~v 128 (336)
T 1yvv_A 92 -----R---------------LSPSP-----------------DEQ-VRWVG----KPGMSAITRAMRG-DMPVSFSCRI 128 (336)
T ss_dssp -----B---------------CCCCC-----------------TTS-CEEEE----SSCTHHHHHHHHT-TCCEECSCCE
T ss_pred -----c---------------cccCC-----------------CCC-ccEEc----CccHHHHHHHHHc-cCcEEecCEE
Confidence 0 00000 000 00110 0112334444433 7999999999
Q ss_pred eEEEecCCCCEEEEEEcCCcEEe-cCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEeccccccccCcc
Q 009635 296 QKIELNDDGTVKNFLLTNGNVID-GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHL 374 (530)
Q Consensus 296 ~~I~~~~~g~~~~v~~~~G~~i~-ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 374 (530)
++|..++++ +.|++.+|+.+. ||.||+|+|++.+.++++.. ......+..+.+.++.++++.|++++|......
T Consensus 129 ~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (336)
T 1yvv_A 129 TEVFRGEEH--WNLLDAEGQNHGPFSHVIIATPAPQASTLLAAA---PKLASVVAGVKMDPTWAVALAFETPLQTPMQGC 203 (336)
T ss_dssp EEEEECSSC--EEEEETTSCEEEEESEEEECSCHHHHGGGGTTC---HHHHHHHTTCCEEEEEEEEEEESSCCSCCCCEE
T ss_pred EEEEEeCCE--EEEEeCCCcCccccCEEEEcCCHHHHHHhhccC---HHHHHHHhhcCccceeEEEEEecCCCCCCCCeE
Confidence 999986555 358888997664 99999999999888887542 233466788889999999999999988765555
Q ss_pred ccccCCcceeeeccCcccccccCCCccEEEEEeeC-ccccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEee
Q 009635 375 LFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP-AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVK 453 (530)
Q Consensus 375 ~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 453 (530)
...+.+. ++.++.+. .+...+.+..++...... ...+..++++++.+.+++.+.+++|..... +.. ....+
T Consensus 204 ~~~~~~~-~~l~~~~~-~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~-p~~-----~~~~r 275 (336)
T 1yvv_A 204 FVQDSPL-DWLARNRS-KPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPA-PVF-----SLAHR 275 (336)
T ss_dssp EECSSSE-EEEEEGGG-STTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCC-CSE-----EEEEE
T ss_pred EeCCCce-eEEEecCc-CCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCC-CcE-----EEccc
Confidence 4444443 33222221 111111112222222111 244567889999999999999999853211 111 12223
Q ss_pred cCCceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhhH
Q 009635 454 TPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 515 (530)
Q Consensus 454 ~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~~ 515 (530)
|.++...+..+. .....+.++|+||||++.. +++++|+.||.++|++|++.+...
T Consensus 276 w~~a~~~~~~~~----~~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~~~ 330 (336)
T 1yvv_A 276 WLYARPAGAHEW----GALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp EEEEEESSCCCC----SCEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred cCccCCCCCCCC----CeeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhhhh
Confidence 333332222211 1122345799999999976 699999999999999999987654
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.91 E-value=7.7e-25 Score=218.12 Aligned_cols=369 Identities=13% Similarity=0.110 Sum_probs=213.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCcEEEEecCcccCceeeeeecC-CCCEE-eeeeceecCCcchHHHHHHHcCCCC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~V~vlEa~~~~GG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (530)
.++||+|||||++||+||+.|+++ |++|+|+|+++++||++.+.... +|+.+ +.|++++...++.+.++++++|+..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~ 85 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT 85 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCBC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh
Confidence 468999999999999999999999 99999999999999999987643 68887 4999999877888999999998732
Q ss_pred CcceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHH-hhhhhhhhhhcCcccccccCcccHHH
Q 009635 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK-FAIGLLPAIIGGQAYVEAQDGLTVQE 211 (530)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (530)
. +.. ...+.. +++... +|.....+..++... +. .+..+ .+....... ...+..++.+
T Consensus 86 ~--~~~-~~~~~~---~G~~~~------~p~~~~~~~~l~~~~--~~-~~~~~~~l~~~~~~~-------~~~~~~s~~e 143 (399)
T 1v0j_A 86 D--YRH-RVFAMH---NGQAYQ------FPMGLGLVSQFFGKY--FT-PEQARQLIAEQAAEI-------DTADAQNLEE 143 (399)
T ss_dssp C--CCC-CEEEEE---TTEEEE------ESSSHHHHHHHHTSC--CC-HHHHHHHHHHHGGGS-------CTTC----CC
T ss_pred c--ccc-ceEEEE---CCEEEe------CCCCHHHHHHHhccc--CC-HHHHHHHHHHHhhcc-------CCCCcccHHH
Confidence 1 111 111111 122111 122222333333221 11 22222 111111110 1234578999
Q ss_pred HHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHH--hhcc-CCeE-EeecCCCCccchHHHHHHHHHcCc
Q 009635 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKH-GSKM-AFLDGNPPERLCLPIVEHIQSLGG 287 (530)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~-~~~~gg~~~~l~~~l~~~l~~~g~ 287 (530)
|+.+. +...+.+.++.++....|+.++++++..... .+...+ ...+ ...+ .++.|| +..++++|++ +.|+
T Consensus 144 ~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~-~~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~ 217 (399)
T 1v0j_A 144 KAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANIT-RLPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNMAA---DHRI 217 (399)
T ss_dssp HHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCS-CCCCCSSSCCCSCCCSEEECBTTH-HHHHHHHHTC---STTE
T ss_pred HHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhh-cceeEeccccchhhhhhccccccc-HHHHHHHHHh---cCCe
Confidence 99874 6778888899999989999999998865431 000000 0011 1123 266666 5666666664 3578
Q ss_pred EEEecceeeEEEecCCCCEEEEEEcCCcEE-ecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEeccc
Q 009635 288 EVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 366 (530)
Q Consensus 288 ~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i-~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~ 366 (530)
+|++|++|++|... | . ++ .||+||+|+|+..+.++. +..++|.++..+.+.++.+
T Consensus 218 ~I~l~~~V~~I~~~-------v----~-~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 218 EVRLNTDWFDVRGQ-------L----R-PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp EEECSCCHHHHHHH-------H----T-TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSS
T ss_pred EEEECCchhhhhhh-------h----h-hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccc
Confidence 99999999999641 2 1 46 799999999999877661 2456777777888888876
Q ss_pred cccccCccccccC--CcceeeeccCccccccc-CCCccEEEEEeeCccccCCCChhHHHHHHHHHHHHhCCCCccccccc
Q 009635 367 LKNTYDHLLFSRS--SLLSVYADMSLTCKEYY-NPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSK 443 (530)
Q Consensus 367 ~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~ 443 (530)
.......+.+++. +...+.. .++..+... ++++.++...+. ..|.. ...|
T Consensus 274 ~~~~~~~~~~~~~~~~~~ri~~-~~~~~~~~~~~~~~~~v~~e~~--~~~~~---------------~~~~--------- 326 (399)
T 1v0j_A 274 DFQGTAVMNYNDLDVPYTRIHE-FRHFHPERDYPTDKTVIMREYS--RFAED---------------DDEP--------- 326 (399)
T ss_dssp CSSSSSEEEECCTTSSCSEEEE-GGGGCTTSCCCSSCEEEEEEEE--EECCT---------------TSCC---------
T ss_pred cCCCCeEEEeCCCCCCcceeEe-ecCCCCCCcCCCCCeEEEEeec--ccccC---------------CCcc---------
Confidence 5433322333321 2222221 222223333 344455544332 12210 0000
Q ss_pred ceEEEEEEeecCCceeecCCCCCCCCCCCCCCC---CceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhh
Q 009635 444 AKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV---EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 514 (530)
Q Consensus 444 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~ 514 (530)
+.-..++... ...... .....+. +|++|||++....| +++++|+.||.++|++|++....
T Consensus 327 -----~ypv~~~~~~----~~~~~~-~~~~~~~~~~~~v~~~G~~~~~~~-~~~e~~i~sa~~~a~~l~~~~~~ 389 (399)
T 1v0j_A 327 -----YYPINTEADR----ALLATY-RARAKSETASSKVLFGGRLGTYQY-LDMHMAIASALNMYDNVLAPHLR 389 (399)
T ss_dssp -----CEECCCHHHH----HHHHHH-HHHHHHHHHHHCEEECHHHHHTCC-CCHHHHHHHHHHHHHHTHHHHHH
T ss_pred -----ccccCcHHHH----HHHHHH-HHHHHhccccCCEEEccceEEEEe-cCHHHHHHHHHHHHHHHhhhhhc
Confidence 0000000000 000000 0011123 68999999866654 58999999999999999865443
No 27
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.91 E-value=9.5e-23 Score=206.64 Aligned_cols=387 Identities=14% Similarity=0.098 Sum_probs=212.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCC-CE---------------EeeeeceecC--
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDG-DW---------------YETGLHIFFG-- 116 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g-~~---------------~d~G~~~~~~-- 116 (530)
+.++||||||||++||+||+.|+++|++|+|||+++++||+++++.. +| +. ++.|.++..+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~-~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTL-SQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceec-cchhceeccCCccccCcchhcccccceeeccc
Confidence 46689999999999999999999999999999999999999998642 12 11 3455554432
Q ss_pred -----CcchHHHHHHHcCCCCCcceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhh
Q 009635 117 -----AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLL 191 (530)
Q Consensus 117 -----~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (530)
....+.++++++|+...+.+......+.+. +++.. . +|... ...+.. ....+.++.. ...+.
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~--~g~~~--~----~p~~~--~~~~~~--~l~~~~~~~~-~~~~~ 154 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK--QGKIY--K----VPANE--IEAISS--PLMGIFEKRR-MKKFL 154 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE--TTEEE--E----CCSSH--HHHHHC--TTSCHHHHHH-HHHHH
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEccceeEEe--CCeEE--E----CCCCh--HHHHhh--hccchhhHHH-HHHHH
Confidence 234688999999987655555543333221 22211 1 11110 001100 1111111100 00000
Q ss_pred hhhhcCc---c-cc--cccCcccHHHHHHHcCCCHHHHHHHHHHHHhhcccC-CCCcccHHHHHHHHHHHHh---hccCC
Q 009635 192 PAIIGGQ---A-YV--EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFI-NPDELSMQCILIALNRFLQ---EKHGS 261 (530)
Q Consensus 192 ~~~~~~~---~-~~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~g~ 261 (530)
....... + .+ ......++.+|+++.+..+.+.+ ++..... +... +....+....+..+..+.. .....
T Consensus 155 ~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~ 232 (453)
T 2bcg_G 155 EWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMA-LWTNDDYLQQPARPSFERILLYCQSVARYGKS 232 (453)
T ss_dssp HHHHHCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHhccCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHH-hccCccccCCchHHHHHHHHHHHHHHHhhcCC
Confidence 0000000 0 00 02356899999999887766544 2222111 1000 0001122222221111111 11234
Q ss_pred eEEeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecC-CCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCcccc
Q 009635 262 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWK 340 (530)
Q Consensus 262 ~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~-~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~ 340 (530)
.+.++.|| +..++++|++.++++|++|+++++|++|..+. ++++++|++ +|+++.||+||+|++++. .++
T Consensus 233 ~~~~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~-~~l------ 303 (453)
T 2bcg_G 233 PYLYPMYG-LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFP-EKC------ 303 (453)
T ss_dssp SEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCG-GGE------
T ss_pred ceEeeCCC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccc-hhh------
Confidence 56678887 78999999999999999999999999999742 566667877 477899999999999874 111
Q ss_pred ccHHHHHHhccCCccEEEEEEEeccccccc----cCccccccC---Ccceeeec-cCcccccccCCCccEEEEE-eeCcc
Q 009635 341 EMAYFKRLEKLVGVPVINIHIWFDRKLKNT----YDHLLFSRS---SLLSVYAD-MSLTCKEYYNPNQSMLELV-FAPAE 411 (530)
Q Consensus 341 ~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~-~s~~~~~~~~~~~~v~~~~-~~~~~ 411 (530)
++... .....++.+++++... ...++++.. .-..+|.. .+..+ ..+|+|+.++.+. .++.
T Consensus 304 --------~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v~~~~~~- 372 (453)
T 2bcg_G 304 --------KSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAH-NVCSKGHYLAIISTIIET- 372 (453)
T ss_dssp --------EEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGG-TSSCTTCEEEEEEEECCS-
T ss_pred --------cccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCC-CCCCCCcEEEEEEEecCC-
Confidence 11110 2223333377766411 112233221 11233332 33333 6688888777543 3332
Q ss_pred ccCCCChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCCCCCCCCCCceEEecccccCCCC
Q 009635 412 EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYL 491 (530)
Q Consensus 412 ~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~ 491 (530)
.+.++ .+...++.+.|... ..+.... .|... .....+|+|++|++...
T Consensus 373 ----~~~~~---~l~~~~~~l~~~~~-------~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~~--- 420 (453)
T 2bcg_G 373 ----DKPHI---ELEPAFKLLGPIEE-------KFMGIAE------LFEPR---------EDGSKDNIYLSRSYDAS--- 420 (453)
T ss_dssp ----SCHHH---HTHHHHGGGCSCSE-------EEEEEEE------EEEES---------SCSTTTSEEECCCCCSC---
T ss_pred ----CCHHH---HHHHHHHHhhhHHH-------hhccchh------eeeec---------CCCCCCCEEECCCCCcc---
Confidence 12222 22234444444311 1222211 22111 11234799999997766
Q ss_pred CcHHHHHHHHHHHHHHHH
Q 009635 492 ASMEGAVLSGKLCAQAIV 509 (530)
Q Consensus 492 ~~i~gA~~sg~~aA~~vl 509 (530)
..+|+|+.++++++++|.
T Consensus 421 ~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 421 SHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp SBSHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 467999999999999998
No 28
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=7.6e-22 Score=197.21 Aligned_cols=263 Identities=15% Similarity=0.101 Sum_probs=180.8
Q ss_pred CCCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeec-------------------CCCCEEeeeece
Q 009635 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-------------------GDGDWYETGLHI 113 (530)
Q Consensus 53 ~~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~-------------------~~g~~~d~G~~~ 113 (530)
..+..+||+|||+|++|+++|+.|++.|++|+|+|+++++||++.++.. ..++.+|+++++
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~ 95 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKF 95 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCB
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeE
Confidence 3456789999999999999999999999999999999999999888641 125788999887
Q ss_pred ecCCcchHHHHHHHcCCCCCcceeccceeeecCCC-------CCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHh
Q 009635 114 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNK-------PGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKF 186 (530)
Q Consensus 114 ~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (530)
+. ....+.+++.+.|+...+.|......+..... .+++. . +|. ....++. ...+.+.++.+.
T Consensus 96 l~-~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~--~----VPs---s~~e~~~-~~lLs~~eK~~l 164 (475)
T 3p1w_A 96 IL-VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIH--K----VPA---TDMEALV-SPLLSLMEKNRC 164 (475)
T ss_dssp EE-TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEE--E----CCC---SHHHHHT-CTTSCHHHHHHH
T ss_pred ee-cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceE--e----CCC---CHHHHhh-ccCCCHHHHHHH
Confidence 75 44568899999999998888887666544211 11111 1 222 2334444 356677777665
Q ss_pred hhhhhhhhhcCc-c---cc--cccCcccHHHHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHH---hh
Q 009635 187 AIGLLPAIIGGQ-A---YV--EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QE 257 (530)
Q Consensus 187 ~~~~~~~~~~~~-~---~~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 257 (530)
..-+.. ..... . .. .+.+..++.+|+++.++++.+.+.+...+..... .+..+.++...+..+..+. ..
T Consensus 165 ~kFL~~-l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~-~~~~~~~a~~~l~ri~~y~~Sl~~ 242 (475)
T 3p1w_A 165 KNFYQY-VSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLN-DDYLKQPAYLTLERIKLYMQSISA 242 (475)
T ss_dssp HHHHHH-HHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGGGGSBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcC-CCcccCCHHHHHHHHHHHHHHHhh
Confidence 332222 22111 0 01 1234679999999999988876543232221111 1222345554444443333 11
Q ss_pred ccCCeEEeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChH
Q 009635 258 KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (530)
Q Consensus 258 ~~g~~~~~~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (530)
..++.+.|+.|| +..|+++|++.++++|++|+++++|++|..++++++++|++.+|+++.||+||+|++..
T Consensus 243 yg~s~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 243 FGKSPFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HSSCSEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred cCCCceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 234678899998 79999999999999999999999999999855778889999999889999999998765
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.89 E-value=4.3e-22 Score=196.93 Aligned_cols=251 Identities=17% Similarity=0.185 Sum_probs=165.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecC-CCCEE-eeeeceecCCcchHHHHHHHcCCCCCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGINDRL 134 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (530)
++||+|||||++||++|+.|++.|++|+|+|+++++||++.+.... .|+.+ +.|+|++...++.+.+++++++....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~- 81 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMP- 81 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhcc-
Confidence 4799999999999999999999999999999999999999886643 67875 99999998888889999999985211
Q ss_pred ceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHHH
Q 009635 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (530)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (530)
+.. ...... ++.... +|.....+..++... +...+..+.+..... . . ..++.++.+|+.
T Consensus 82 -~~~-~~~~~~---~g~~~~------~P~~~~~~~~l~~~~--~~~~~~~~~l~~~~~----~--~--~~~~~sl~e~~~ 140 (384)
T 2bi7_A 82 -YVN-RVKATV---NGQVFS------LPINLHTINQFFSKT--CSPDEARALIAEKGD----S--T--IADPQTFEEEAL 140 (384)
T ss_dssp -CCC-CEEEEE---TTEEEE------ESCCHHHHHHHTTCC--CCHHHHHHHHHHHSC----C--S--CSSCCBHHHHHH
T ss_pred -ccc-ceEEEE---CCEEEE------CCCChhHHHHHhccc--CCHHHHHHHHHHhhh----c--c--CCCCcCHHHHHH
Confidence 111 111111 111111 222223333333211 111111112211111 0 0 235689999998
Q ss_pred HcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHH-H-Hhh-ccCCeE-EeecCCCCccchHHHHHHHHHcCcEEE
Q 009635 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR-F-LQE-KHGSKM-AFLDGNPPERLCLPIVEHIQSLGGEVR 290 (530)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~g~~~-~~~~gg~~~~l~~~l~~~l~~~g~~i~ 290 (530)
+. +...+.+.++.++...+|+.++++++..... .+.. + ... .....+ .++.|| ...++++|++ +.|++|+
T Consensus 141 ~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~-r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~ 214 (384)
T 2bi7_A 141 RF-IGKELYEAFFKGYTIKQWGMQPSELPASILK-RLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN---HENIKVD 214 (384)
T ss_dssp HH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCC-SCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC---STTEEEE
T ss_pred Hh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHh-ccccccccccccccccccEEECcC-HHHHHHHHHh---cCCCEEE
Confidence 87 6788899999999999999999998875321 0000 0 000 111233 377766 6677666665 3578999
Q ss_pred ecceee-EEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEec
Q 009635 291 LNSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD 364 (530)
Q Consensus 291 ~~t~V~-~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~ 364 (530)
+|++|+ +|.. .+|+||+|+|+..+..++ +..++|.++..+.+.+|
T Consensus 215 l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 215 LQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEE
T ss_pred ECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeC
Confidence 999999 8842 299999999999877762 23567777777777777
No 30
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.89 E-value=1.5e-20 Score=189.34 Aligned_cols=386 Identities=14% Similarity=0.116 Sum_probs=216.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeee-c------C-------------CCCEEeeeecee
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWK-D------G-------------DGDWYETGLHIF 114 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~-~------~-------------~g~~~d~G~~~~ 114 (530)
+..+||+|||||++|+++|+.|+++|++|+|+|+++++||++.++. . . .++.+|.|++++
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l 83 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFL 83 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCccee
Confidence 3568999999999999999999999999999999999999998875 1 0 457788888877
Q ss_pred cCCcchHHHHHHHcCCCCCcceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHH---Hhhhhhh
Q 009635 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKV---KFAIGLL 191 (530)
Q Consensus 115 ~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 191 (530)
... ..+.++++++|+...+.+......+... +++.. . +|... ...+. .......++. +....+.
T Consensus 84 ~~~-~~l~~ll~~lgl~~~l~~~~~~~~~~~~--~g~~~--~----~p~~~---~~~~~-~~l~~~~~~~~~~~~~~~~~ 150 (433)
T 1d5t_A 84 MAN-GQLVKMLLYTEVTRYLDFKVVEGSFVYK--GGKIY--K----VPSTE---TEALA-SNLMGMFEKRRFRKFLVFVA 150 (433)
T ss_dssp ETT-SHHHHHHHHHTGGGGCCEEECCEEEEEE--TTEEE--E----CCCSH---HHHHH-CSSSCHHHHHHHHHHHHHHH
T ss_pred ecc-chHHHHHHHcCCccceEEEEeCceEEee--CCEEE--E----CCCCH---HHHhh-CcccChhhHHHHHHHHHHHH
Confidence 543 3578899999987655555443333221 22211 1 11111 00000 0111111110 0110000
Q ss_pred hhhhcCcc---cccccCcccHHHHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHhh--ccC-CeEEe
Q 009635 192 PAIIGGQA---YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE--KHG-SKMAF 265 (530)
Q Consensus 192 ~~~~~~~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~ 265 (530)
. +....+ ........++.+|+++.+..+.+.+ ++...+....+.++.+.+....+..+..+... .++ ..+.+
T Consensus 151 ~-~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~ 228 (433)
T 1d5t_A 151 N-FDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLY 228 (433)
T ss_dssp H-CCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEE
T ss_pred h-hcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 0 000000 0112356899999999877766544 33222111111233333443333333233321 122 34667
Q ss_pred ecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHH
Q 009635 266 LDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 345 (530)
Q Consensus 266 ~~gg~~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~ 345 (530)
+.|| +..++++|.+.+++.|++|+++++|++|..+ ++++++|++ +|+++.||+||+|++++. ..+ .
T Consensus 229 p~gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~-~~~-~--------- 294 (433)
T 1d5t_A 229 PLYG-LGELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVP-DRV-R--------- 294 (433)
T ss_dssp ETTC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCG-GGE-E---------
T ss_pred eCcC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCc-ccc-c---------
Confidence 8887 7999999999999999999999999999874 566666664 677899999999998875 111 1
Q ss_pred HHHhccCCccEEEEEEEecccccc----ccCccccccCC---cceeee-ccCcccccccCCCccEEEE-EeeCccccCCC
Q 009635 346 KRLEKLVGVPVINIHIWFDRKLKN----TYDHLLFSRSS---LLSVYA-DMSLTCKEYYNPNQSMLEL-VFAPAEEWISC 416 (530)
Q Consensus 346 ~~l~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~---~~~~~~-~~s~~~~~~~~~~~~v~~~-~~~~~~~~~~~ 416 (530)
++. .....++.+++++.. ....+.++... -..++. ..+ .++..+|+|+.++.+ ..++..
T Consensus 295 ----~~~--~~~~~~~il~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s-~d~~~aP~G~~~~~~~~~~p~~----- 362 (433)
T 1d5t_A 295 ----KAG--QVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMIS-YAHNVAAQGKYIAIASTTVETT----- 362 (433)
T ss_dssp ----EEE--EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEE-GGGTSSCTTCEEEEEEEECCSS-----
T ss_pred ----ccC--cceeEEEEEcCcccccCCCceEEEEeCccccCCCCCEEEEEEC-CCCcccCCCCEEEEEEEecCCC-----
Confidence 111 111122236766531 11122232211 122332 234 667788999877754 333321
Q ss_pred ChhHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHH
Q 009635 417 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEG 496 (530)
Q Consensus 417 ~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~g 496 (530)
+.+ +.+...++.+.|... ..+... ..|.... ....+|+|+++++-.. ..+|+
T Consensus 363 ~~~---~~l~~~~~~l~~~~~-------~~~~~~------~~~~~~~---------~~~~~~~~~~~~~d~~---~~~e~ 414 (433)
T 1d5t_A 363 DPE---KEVEPALGLLEPIDQ-------KFVAIS------DLYEPID---------DGSESQVFCSCSYDAT---THFET 414 (433)
T ss_dssp CHH---HHTHHHHTTTCSCSE-------EEEEEE------EEEEESC---------CSTTTCEEECCCCCSC---SBSHH
T ss_pred CHH---HHHHHHHHHhhhHHh-------heeccc------eeeeecC---------CCCCCCEEECCCCCcc---ccHHH
Confidence 222 223334444433211 122222 1221110 1224699999987665 35799
Q ss_pred HHHHHHHHHHHHH
Q 009635 497 AVLSGKLCAQAIV 509 (530)
Q Consensus 497 A~~sg~~aA~~vl 509 (530)
++.+++..-++|.
T Consensus 415 ~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 415 TCNDIKDIYKRMA 427 (433)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999888887775
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.88 E-value=1.9e-22 Score=198.33 Aligned_cols=256 Identities=16% Similarity=0.138 Sum_probs=166.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEe-eeeceecCCcchHHHHHHHcCCCCCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYE-TGLHIFFGAYPNIQNLFGELGINDRLQ 135 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d-~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (530)
++||+|||||++||++|+.|++.|++|+|+|+++++||++.+.. .+|+.++ .|++++...++.+.+++++++....
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~-- 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR-- 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHHHHHTTSCBCC--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHHHHHHhhhhhh--
Confidence 36999999999999999999999999999999999999998866 3688885 9999998777788889988875321
Q ss_pred eeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHHHHH
Q 009635 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (530)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (530)
+......+ . .+.... +|.....+..++... ...+..+.+...... ....+..++.+|+.+
T Consensus 78 ~~~~~~~~-~---~g~~~~------~p~~~~~~~~l~~~~---~~~~~~~~l~~~~~~-------~~~~~~~s~~~~~~~ 137 (367)
T 1i8t_A 78 FTNSPLAI-Y---KDKLFN------LPFNMNTFHQMWGVK---DPQEAQNIINAQKKK-------YGDKVPENLEEQAIS 137 (367)
T ss_dssp CCCCCEEE-E---TTEEEE------SSBSHHHHHHHHCCC---CHHHHHHHHHHHTTT-------TCCCCCCSHHHHHHH
T ss_pred ccccceEE-E---CCeEEE------cCCCHHHHHHHhccC---CHHHHHHHHHHHhhc-------cCCCCCccHHHHHHH
Confidence 11111111 0 111111 233333344433221 111111111111111 012346799999988
Q ss_pred cCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHH--hhcc-CCeE-EeecCCCCccchHHHHHHHHHcCcEEEe
Q 009635 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKH-GSKM-AFLDGNPPERLCLPIVEHIQSLGGEVRL 291 (530)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~-~~~~gg~~~~l~~~l~~~l~~~g~~i~~ 291 (530)
. +..++.+.++.++...+|+.+++++++.... .+.... ...+ ...+ .++.|| +..++++|++ |++|++
T Consensus 138 ~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~-~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~-----g~~i~l 209 (367)
T 1i8t_A 138 L-VGEDLYQALIKGYTEKQWGRSAKELPAFIIK-RIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKMLE-----GVDVKL 209 (367)
T ss_dssp H-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSC-CCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHHT-----TSEEEC
T ss_pred H-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHh-hceeeeccccccccchhhcccCCC-HHHHHHHHhc-----CCEEEe
Confidence 7 6778888899999999999999998865321 000000 0011 1223 367776 5666666654 689999
Q ss_pred cceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEeccccc
Q 009635 292 NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 368 (530)
Q Consensus 292 ~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~ 368 (530)
|++|++|.. . | .+.||+||+|+|+..+..+ .+.+++|.++..+.+.++++..
T Consensus 210 ~~~V~~i~~----~---v------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 210 GIDFLKDKD----S---L------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp SCCGGGSHH----H---H------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred CCceeeech----h---h------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEEeccccC
Confidence 999999852 1 2 2569999999999876544 1346677788888888887643
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.85 E-value=1.6e-20 Score=184.31 Aligned_cols=357 Identities=16% Similarity=0.185 Sum_probs=217.7
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEE-eeeeceecCCcchHHHHHHHcCCCC
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (530)
.+..+||+|||||++||++|+.|++.|++|+|+|+++++||++.+.....|+.+ +.|+|++......+.+++++++...
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 105 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR 105 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc
Confidence 346789999999999999999999999999999999999999998664578875 9999999888888999999998422
Q ss_pred CcceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCcccccccCcccHHHH
Q 009635 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (530)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (530)
. +.. ..... .++++.. +|.....+..++.. .+........+ .. ......+++++++|
T Consensus 106 ~--~~~-~~~~~---~~g~l~~------lP~~~~~~~~l~~~--~~~~~~~~~~l----~~-----~~~~~~~~~s~~e~ 162 (397)
T 3hdq_A 106 P--YQH-RVLAS---VDGQLLP------IPINLDTVNRLYGL--NLTSFQVEEFF----AS-----VAEKVEQVRTSEDV 162 (397)
T ss_dssp E--CCC-BEEEE---ETTEEEE------ESCCHHHHHHHHTC--CCCHHHHHHHH----HH-----HCCCCSSCCBHHHH
T ss_pred c--ccc-cceEE---ECCEEEE------cCCChHHHHHhhcc--CCCHHHHHHHH----hh-----cccCCCCCcCHHHH
Confidence 1 111 11111 1222221 23333333333321 11111111111 10 01123456899999
Q ss_pred HHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHh--hcc-CCeE-EeecCCCCccchHHHHHHHHHcCcE
Q 009635 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKH-GSKM-AFLDGNPPERLCLPIVEHIQSLGGE 288 (530)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-g~~~-~~~~gg~~~~l~~~l~~~l~~~g~~ 288 (530)
+.+. +..++.+.++.++..+.|+.+++++++.... .+..... ..+ ...+ .++.|| ...+++.|++ +.|++
T Consensus 163 ~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gG-y~~l~e~l~~---~~g~~ 236 (397)
T 3hdq_A 163 VVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHG-YTRMFQNMLS---SPNIK 236 (397)
T ss_dssp HHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTC-HHHHHHHHTC---STTEE
T ss_pred HHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCC-HHHHHHHHHh---ccCCE
Confidence 9876 6678889999999999999999999975321 1100000 000 1122 356666 5566555543 35899
Q ss_pred EEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEeccccc
Q 009635 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 368 (530)
Q Consensus 289 i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~ 368 (530)
|++|++|+++ +.++.+|+||+|+|...+... ...++.+.++..+.+.++.+..
T Consensus 237 V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 237 VMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp EEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred EEECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccccC
Confidence 9999999733 335679999999998776332 1345677788888888986654
Q ss_pred cccCcccccc-CCcceeeeccCcccccccCCCccEEEEEeeC--ccccCCCChhHHHHHHHHHHHHhCCCCcccccccce
Q 009635 369 NTYDHLLFSR-SSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAK 445 (530)
Q Consensus 369 ~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~ 445 (530)
.+...+-+++ +++.-+. ..++. +.. +.++++++..+.. .+..-...+++-.+.+.+.++..
T Consensus 290 ~~~~~vn~~d~~p~tRi~-e~k~~-~~~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~a------------- 353 (397)
T 3hdq_A 290 LPTGTVNYPNDYAYTRVS-EFKHI-TGQ-RHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEALA------------- 353 (397)
T ss_dssp CSSSEEECSSSSSCSEEE-EHHHH-HCC-CCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHHH-------------
T ss_pred CCCeEEEeCCCCcceEEE-eeccc-CCC-CCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHHH-------------
Confidence 4333233343 3443332 22222 121 3455666654431 11111222232222222211110
Q ss_pred EEEEEEeecCCceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHh
Q 009635 446 IVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 511 (530)
Q Consensus 446 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~ 511 (530)
...+||+|+|......|. .|+.++.+|..++++++..
T Consensus 354 ----------------------------~~~~~v~~~GRlg~y~Y~-~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 354 ----------------------------DAAQDVTFVGRLATYRYY-NMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp ----------------------------HHCTTEEECSTTTTTCCC-CHHHHHHHHHHHHHHHHC-
T ss_pred ----------------------------hcCCCEEEcccceEEEec-cHHHHHHHHHHHHHHHhcc
Confidence 113489999998888775 7999999999999988753
No 33
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.75 E-value=3.8e-15 Score=153.08 Aligned_cols=254 Identities=17% Similarity=0.179 Sum_probs=145.6
Q ss_pred HHHHHHHcCCCCCcceeccceeeecCCCCCCcccccCCCCCCCchhhHHHHHhcccCCChHHHHHhhhhhhhhhhcCc--
Q 009635 121 IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ-- 198 (530)
Q Consensus 121 ~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (530)
+.+++.++|+...+.|......+.+. .+.+.. +|. ....++.. ..+.+.++.+... ++.......
T Consensus 239 lv~LL~~sgV~~yLEFk~v~~~y~~~--~G~~~~------VPa---s~~eif~s-~~Lsl~EKr~L~k-Fl~~~~~~~~~ 305 (650)
T 1vg0_A 239 LIDLLIKSNVSRYAEFKNITRILAFR--EGTVEQ------VPC---SRADVFNS-KQLTMVEKRMLMK-FLTFCVEYEEH 305 (650)
T ss_dssp HHHHHHHHTGGGGCCEEECCEEEEES--SSSEEE------CCC---SHHHHHHC-SSSCHHHHHHHHH-HHHHHHTGGGC
T ss_pred HHHHHHHcCCcceeeEEEccceEEec--CCCEeE------CCC---CHHHHHhC-cCCCHHHHHHHHH-HHHHHHHhccC
Confidence 56777777776666666554444432 122111 222 33344443 5566666554332 221111111
Q ss_pred -ccccccCcccHHHHHHHcCCCHHHHHHHHHHHHhhcccCCCCcccHHHHHHHHHHHHh--hccC-CeEEeecCCCCccc
Q 009635 199 -AYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMAFLDGNPPERL 274 (530)
Q Consensus 199 -~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~~~~~gg~~~~l 274 (530)
..+...+..++.+|+++.+..+.+...+...+ .+. .....+....+..+..++. ..+| ..+.|+.|| ...|
T Consensus 306 p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~--~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG-~g~L 380 (650)
T 1vg0_A 306 PDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AMT--SETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYG-QGEL 380 (650)
T ss_dssp HHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTC-TTHH
T ss_pred hHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH--hcc--CCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCc-hhHH
Confidence 11234567899999999988877554333211 111 2222344444333333332 2233 367888887 8999
Q ss_pred hHHHHHHHHHcCcEEEecceeeEEEecCC-CCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCC
Q 009635 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVG 353 (530)
Q Consensus 275 ~~~l~~~l~~~g~~i~~~t~V~~I~~~~~-g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~ 353 (530)
+++|++.+.+.|++|+++++|.+|..+++ |++++|++.+|++++||+||++ +.+ +|.... .++.+
T Consensus 381 ~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~-~~~-----lp~~~~--------~~~~~ 446 (650)
T 1vg0_A 381 PQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE-DSY-----LSENTC--------SRVQY 446 (650)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE-GGG-----BCTTTT--------TTCCC
T ss_pred HHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC-hhh-----cCHhHh--------ccccc
Confidence 99999999999999999999999988543 7888888888999999999983 222 233221 12234
Q ss_pred ccEEEEEEEeccccccccC----c-cccccC--Ccceeee-ccCcccccccCCCccEEEEEe
Q 009635 354 VPVINIHIWFDRKLKNTYD----H-LLFSRS--SLLSVYA-DMSLTCKEYYNPNQSMLELVF 407 (530)
Q Consensus 354 ~~~~~v~~~~~~~~~~~~~----~-~~~~~~--~~~~~~~-~~s~~~~~~~~~~~~v~~~~~ 407 (530)
..+.++.+.++++...... . ++++.. .-..++. ..+. .....|+|..|+.+..
T Consensus 447 ~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~~g~~~~V~i~~~Ss-~~~~cP~G~~Vv~lst 507 (650)
T 1vg0_A 447 RQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCS-STMTCMKGTYLVHLTC 507 (650)
T ss_dssp EEEEEEEEEESSCSSCCSCCCCCEEEEECCSSTTSCCEEEEEECG-GGTSSCTTCEEEEEEE
T ss_pred cceEEEEEEecCCCCCcCCCcceEEEEccCccCCCCCEEEEEeCC-CCCCCCCCCEEEEEEe
Confidence 5677888888887643211 1 122211 1112222 2332 4567788988887543
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.72 E-value=2.6e-17 Score=160.02 Aligned_cols=81 Identities=33% Similarity=0.602 Sum_probs=71.8
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC-cccCceeeeeec---------CCCCEEeeeeceecCCcchHHH
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR-DVLGGKIAAWKD---------GDGDWYETGLHIFFGAYPNIQN 123 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~-~~~GG~~~~~~~---------~~g~~~d~G~~~~~~~~~~~~~ 123 (530)
.+..+||+|||||++||+||+.|+++|++|+|||++ +++||++.++.. ..++.+|.|++++...+..+.+
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~ 120 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLA 120 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHH
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHH
Confidence 346789999999999999999999999999999999 999999988763 2578999999999888888999
Q ss_pred HHHHcCCCCCc
Q 009635 124 LFGELGINDRL 134 (530)
Q Consensus 124 l~~~lg~~~~~ 134 (530)
+++++|+....
T Consensus 121 ~~~~lGl~~~~ 131 (376)
T 2e1m_A 121 LIDKLGLKRRL 131 (376)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCCcce
Confidence 99999997643
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.72 E-value=1.9e-15 Score=143.78 Aligned_cols=66 Identities=27% Similarity=0.475 Sum_probs=55.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHH
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQN 123 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~ 123 (530)
++||+|||||++||+||+.|+++|++|+||||++.+||++.+.. ..+..+|.|++.+......+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~~~~~~~~~~~~ 67 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFAT 67 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCccccccCcHHHHH
Confidence 57999999999999999999999999999999999999988754 4678889998877644444333
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.70 E-value=1.1e-15 Score=154.49 Aligned_cols=64 Identities=13% Similarity=0.195 Sum_probs=55.8
Q ss_pred CccchHHHHHHHHHcCcEEEecc---eeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCC
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t---~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~ 336 (530)
+..++..|.+.++++|++|++++ +|++|..+ ++.+++|++.+|++++||+||+|++.++ ..|++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s-~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA-GQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG-GGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh-hhhcC
Confidence 56788999999999999999999 99999984 5667779999998899999999999997 55554
No 37
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.67 E-value=1.5e-15 Score=152.10 Aligned_cols=203 Identities=13% Similarity=0.164 Sum_probs=108.4
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhc
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 350 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~ 350 (530)
+..+++.|.+.+++.|++|+++++|++|..+ ++.++.|++.+| ++.||.||+|++.++- .+..... ..
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~-~l~~~~g---------~~ 240 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSS-VLAEMAG---------FE 240 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHH-HHHHHHT---------CC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHH-HHHHHcC---------CC
Confidence 4578899999999999999999999999974 556677888888 7999999999998762 2211000 00
Q ss_pred cCCccEEEEEEEeccccccccCccccccCCcceeeeccCcccccccCCCccEEEEEeeCccccCCCChhHHHHHHHHHHH
Q 009635 351 LVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 430 (530)
Q Consensus 351 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~ 430 (530)
++..+.....+.+ ++........++... ...|.- + .+++..++.....+...+....+++..+.+++.+.
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~y~~-----p--~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (405)
T 2gag_B 241 LPIQSHPLQALVS-ELFEPVHPTVVMSNH--IHVYVS-----Q--AHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAV 310 (405)
T ss_dssp CCEEEEEEEEEEE-EEBCSCCCSEEEETT--TTEEEE-----E--CTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHH
T ss_pred CCccccceeEEEe-cCCccccCceEEeCC--CcEEEE-----E--cCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHH
Confidence 1111111111222 222110111111110 011110 0 12333444433322222323345677888899999
Q ss_pred HhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHH
Q 009635 431 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 510 (530)
Q Consensus 431 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~ 510 (530)
+++|..... .+.. .|. +.+...++..... ...+.+|+|++..+... ++.-|...|+.+|+.|..
T Consensus 311 ~~~p~l~~~-----~~~~-~w~----g~~~~t~d~~p~i--g~~~~~~l~~~~G~~g~----G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 311 ELFPIFARA-----HVLR-TWG----GIVDTTMDASPII--SKTPIQNLYVNCGWGTG----GFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp HHCGGGGGC-----EECE-EEE----EEEEEETTSCCEE--EECSSBTEEEEECCGGG----CSTTHHHHHHHHHHHHHH
T ss_pred HhCCccccC-----Ccce-EEe----eccccCCCCCCEe--cccCCCCEEEEecCCCc----hhhHHHHHHHHHHHHHhC
Confidence 999863221 1211 121 1111122111100 01125688888755433 577788899999999986
Q ss_pred h
Q 009635 511 D 511 (530)
Q Consensus 511 ~ 511 (530)
.
T Consensus 375 ~ 375 (405)
T 2gag_B 375 D 375 (405)
T ss_dssp T
T ss_pred C
Confidence 4
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.66 E-value=5.7e-16 Score=152.99 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=50.9
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC--cEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G--~~i~ad~VI~a~~~~~ 330 (530)
+..+++.|.+.++++|++|+++++|++|..++++.+ .|++.+| .+++||+||+|++.++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 568899999999999999999999999998555533 5888888 4799999999999986
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.64 E-value=1.1e-15 Score=151.68 Aligned_cols=205 Identities=14% Similarity=0.178 Sum_probs=109.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHh-
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE- 349 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~- 349 (530)
+..+++.|.+.++++|++|+++++|++|..+ ++.+.+|++.+| +++||+||+|++.++ ..+.+... +.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s-~~l~~~~g--------~~~ 216 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWA-NLINAMAG--------IKT 216 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGH-HHHHHHHT--------CCS
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhH-HHHHHHcC--------CCc
Confidence 5688899999999999999999999999974 556666888888 899999999999986 22211100 00
Q ss_pred ccCCccEEEEEEEeccccccccC-ccccccCCcceeeeccCcccccccCCCccEEEEE-eeCccccCCCChhHHHHHHHH
Q 009635 350 KLVGVPVINIHIWFDRKLKNTYD-HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELV-FAPAEEWISCSDSEIIDATMK 427 (530)
Q Consensus 350 ~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~e~~~~~~~~ 427 (530)
.++..+.....+.++ +...... ..++... ....|.- . .+++ .++... ......+....+++..+.+++
T Consensus 217 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~y~~------p-~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 217 KIPIEPYKHQAVITQ-PIKRGTINPMVISFK-YGHAYLT------Q-TFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp CCCCEEEEEEEEEEC-CCSTTSSCSEEEEST-TTTEEEE------C-CSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred CcCCCeeEeEEEEEc-cCCcccCCCeEEecC-CCeEEEE------E-eCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 011122222222332 2111001 1111110 0011110 0 1233 333321 111112223345677888899
Q ss_pred HHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCCCCCCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHH
Q 009635 428 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 507 (530)
Q Consensus 428 ~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~ 507 (530)
.+.+++|..... .+.. .|. +.....+......- .....+|+|++..+.. .++.-|...|+.+|+.
T Consensus 287 ~~~~~~p~l~~~-----~~~~-~~~----g~r~~t~d~~p~ig-~~~~~~~~~~~~G~~g----~G~~~a~~~g~~la~~ 351 (382)
T 1y56_B 287 YFTKIIPALKNL-----LILR-TWA----GYYAKTPDSNPAIG-RIEELNDYYIAAGFSG----HGFMMAPAVGEMVAEL 351 (382)
T ss_dssp HHHHHCGGGGGS-----EEEE-EEE----EEEEECTTSCCEEE-EESSSBTEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCC-----CceE-EEE----eccccCCCCCcEec-cCCCCCCEEEEEecCc----chHhhhHHHHHHHHHH
Confidence 999999864321 1221 221 11112221111000 0112568988865433 3788899999999999
Q ss_pred HHHh
Q 009635 508 IVQD 511 (530)
Q Consensus 508 vl~~ 511 (530)
|...
T Consensus 352 i~~~ 355 (382)
T 1y56_B 352 ITKG 355 (382)
T ss_dssp HHHS
T ss_pred HhCC
Confidence 9865
No 40
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.63 E-value=2e-16 Score=157.08 Aligned_cols=57 Identities=18% Similarity=0.084 Sum_probs=50.7
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+..++..|.+.++++|++|+++++|++|..++++ +.|++.+| +++||+||+|++.++
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~--~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA--WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE--EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe--EEEEeCCC-EEEcCEEEECCChhH
Confidence 5789999999999999999999999999985443 57888888 899999999999987
No 41
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.62 E-value=5.2e-13 Score=142.11 Aligned_cols=62 Identities=18% Similarity=0.155 Sum_probs=52.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhC
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 335 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll 335 (530)
+..++..|.+.++++|++|+++++|++|..++++ +.|++.+|+++.||.||+|++.++ ..+.
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~i~Ad~VVlAtG~~s-~~l~ 477 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC--WLLNFAGDQQATHSVVVLANGHQI-SRFS 477 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCGGGG-GCST
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe--EEEEECCCCEEECCEEEECCCcch-hccc
Confidence 5788999999999999999999999999985443 478888887899999999999986 4443
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.61 E-value=2.8e-14 Score=151.98 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=52.0
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc-EEecCEEEEccChHHHhhhC
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDILKLQL 335 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~-~i~ad~VI~a~~~~~~~~ll 335 (530)
+..++..|.+.+++.|++|+++++|++|..++++ +.|++.+|+ +++||.||+|++.++ ..++
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s-~~l~ 473 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL-PEWE 473 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT-TCST
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch-hccc
Confidence 5788999999999999999999999999985444 368888887 799999999999985 4443
No 43
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.61 E-value=5e-14 Score=139.73 Aligned_cols=198 Identities=15% Similarity=0.163 Sum_probs=108.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhc
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 350 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~ 350 (530)
+..+.+.|.+.+++.|++|+++++|++|..+ ++.+ .|++.+| +++||.||+|++.+. ..+++... ..
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s-~~l~~~~~---------~~ 229 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWS-GMFFKQLG---------LN 229 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGT-HHHHHHTT---------CC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhH-HHHHHhcC---------CC
Confidence 4678889999999999999999999999874 4444 6888888 899999999999875 22321110 01
Q ss_pred cCCccEEEEEEEeccccccccCccccccCCcceeeeccCcccccccCCCccEEEEEeeCccccCCCChhHHHHHHHHHHH
Q 009635 351 LVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 430 (530)
Q Consensus 351 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~~~l~ 430 (530)
++..+.....+.++.+-. .....++.+ ..|.- + .+++..++..... ...+....+++..+.+++.+.
T Consensus 230 ~~~~~~~g~~~~~~~~~~-~~~~~~~~~----~~~~~-----p--~~~g~~~vG~~~~-~~~~~~~~~~~~~~~l~~~~~ 296 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDDI-PLTKTLYHD----HCYIV-----P--RKSGRLVVGATMK-PGDWSETPDLGGLESVMKKAK 296 (382)
T ss_dssp CCCEEEEEEEEEEECCSS-CCCSEEEET----TEEEE-----E--CTTSEEEEECCCE-ETCCCCSCCHHHHHHHHHHHH
T ss_pred CceeccceEEEEECCCCC-CccceEEcC----CEEEE-----E--cCCCeEEEeeccc-ccCCCCCCCHHHHHHHHHHHH
Confidence 111222223333332210 011111111 01110 0 1123222322111 123333445677889999999
Q ss_pred HhCCCCcccccccceEEEEEEeecCCceeecCCCCCCCCCCC-C-CCCCceEEecccccCCCCCcHHHHHHHHHHHHHHH
Q 009635 431 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ-R-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 508 (530)
Q Consensus 431 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~-~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~v 508 (530)
+++|..... .+.. .|. +.+...+.. .|.. . ...+|+|+++.+.. .++.-|..+|+.+|+.|
T Consensus 297 ~~~p~l~~~-----~~~~-~w~----g~~~~t~d~---~p~ig~~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i 359 (382)
T 1ryi_A 297 TMLPAIQNM-----KVDR-FWA----GLRPGTKDG---KPYIGRHPEDSRILFAAGHFR----NGILLAPATGALISDLI 359 (382)
T ss_dssp HHCGGGGGS-----EEEE-EEE----EEEEECSSS---CCEEEEETTEEEEEEEECCSS----CTTTTHHHHHHHHHHHH
T ss_pred HhCCCcCCC-----ceee-EEE----EecccCCCC---CcEeccCCCcCCEEEEEcCCc----chHHHhHHHHHHHHHHH
Confidence 999864321 1221 221 111111211 1111 1 12468998876543 36888999999999998
Q ss_pred HHh
Q 009635 509 VQD 511 (530)
Q Consensus 509 l~~ 511 (530)
+..
T Consensus 360 ~~~ 362 (382)
T 1ryi_A 360 MNK 362 (382)
T ss_dssp TTC
T ss_pred hCC
Confidence 754
No 44
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.60 E-value=5.1e-14 Score=140.04 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=51.6
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCC
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~ 336 (530)
+..++..|.+.++++|++|+++++|++|..++++ +.|++.+| +++||.||+|++.++ ..+++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~-~~l~~ 210 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWN-SKLLS 210 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGH-HHHGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccH-HHHhh
Confidence 4688899999999999999999999999985444 35778777 799999999999986 44443
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.57 E-value=3.1e-14 Score=141.97 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=48.4
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+..++..|.+.+++.|++|+++++|++|..++++ + .|++.+| +++||+||+|++.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v-~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDADG-V-SVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-E-EEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-E-EEEECCC-EEEcCEEEEcCCcCh
Confidence 4678889999999999999999999999875443 3 4777777 799999999999985
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.57 E-value=1.2e-13 Score=141.26 Aligned_cols=58 Identities=28% Similarity=0.490 Sum_probs=50.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.|.+.+++.|++|+++++|++|.. +++.+++|++.+|+++.||.||+|++.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 45777888899999999999999999987 45667789999998999999999999875
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.55 E-value=6.9e-15 Score=149.18 Aligned_cols=63 Identities=22% Similarity=0.247 Sum_probs=52.5
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEec--------------CCCCEEEEEEcCCcEE--ecCEEEEccChHHHhhh
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDILKLQ 334 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~--------------~~g~~~~v~~~~G~~i--~ad~VI~a~~~~~~~~l 334 (530)
+..+++.|.+.++++|++|+++++|++|..+ +++.+++|++.+| ++ .||.||+|++.++ ..|
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s-~~l 257 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS-NRL 257 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH-HHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH-HHH
Confidence 5688999999999999999999999999872 3445667888888 68 9999999999986 344
Q ss_pred C
Q 009635 335 L 335 (530)
Q Consensus 335 l 335 (530)
+
T Consensus 258 ~ 258 (448)
T 3axb_A 258 L 258 (448)
T ss_dssp H
T ss_pred H
Confidence 3
No 48
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.50 E-value=2.4e-13 Score=140.83 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=50.5
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC---C--cEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~---G--~~i~ad~VI~a~~~~~ 330 (530)
+.+++..+.+.+.++|++|+++++|++|..+ ++.+++|++.+ | .+++||.||+|+|+|+
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 5788999999999999999999999999984 56666787754 3 3799999999999986
No 49
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.49 E-value=2.5e-12 Score=133.52 Aligned_cols=59 Identities=7% Similarity=0.038 Sum_probs=49.2
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc---CCc--EEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~---~G~--~i~ad~VI~a~~~~~ 330 (530)
+.+++..+++.+.++|++|+++++|++|..+ ++.+++|++. .|+ +|+||.||+|+++|+
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 5678889999999999999999999999984 5566677753 343 699999999999986
No 50
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.47 E-value=7e-12 Score=124.73 Aligned_cols=39 Identities=33% Similarity=0.616 Sum_probs=35.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCce
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~ 95 (530)
+|||+|||||++||++|+.|+++|++|+|+|+++.+|..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 589999999999999999999999999999998877643
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.46 E-value=1e-12 Score=131.45 Aligned_cols=55 Identities=22% Similarity=0.322 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..|.+.|.+.+.+ ++|+++++|++|+.++++ +.|++.+|++++||.||.|.+.++
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECCCcCh
Confidence 3555667777765 899999999999985443 358889998999999999998863
No 52
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.46 E-value=1.1e-14 Score=143.84 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=52.4
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCC
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~ 336 (530)
+..+++.|.+.+++.|++|+++++|++|..++++ +.|++.+| ++.||+||+|++.++ ..+++
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGGG-GGTST
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCccH-Hhhcc
Confidence 5688999999999999999999999999975444 35888888 699999999999987 55654
No 53
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.45 E-value=2.2e-13 Score=137.58 Aligned_cols=59 Identities=24% Similarity=0.443 Sum_probs=50.9
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++.+|++++||.||+|++.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 3577888999999999999999999999874 5666789999997799999999998765
No 54
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.44 E-value=9.6e-13 Score=135.22 Aligned_cols=58 Identities=26% Similarity=0.326 Sum_probs=49.1
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC-c--EEecC-EEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-N--VIDGD-AYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G-~--~i~ad-~VI~a~~~~~ 330 (530)
.++..|.+.++++|++|+++++|++|..++++++++|.+.++ + +|+|+ .||+|++.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788999999999999999999999999865788888876543 2 58996 9999998764
No 55
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.44 E-value=6.3e-12 Score=126.28 Aligned_cols=65 Identities=15% Similarity=0.149 Sum_probs=51.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc--EEecCEEEEccChHH-HhhhCC
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVDI-LKLQLP 336 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~--~i~ad~VI~a~~~~~-~~~ll~ 336 (530)
..+...|.+.+++.|++|+.+++|++|..++++..+.|.+.+|+ +++||.||.|+|.+. +.+++.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 45667788888888999999999999998666655677788897 699999999999764 334443
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.42 E-value=2.6e-11 Score=120.75 Aligned_cols=58 Identities=10% Similarity=0.112 Sum_probs=46.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~---~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.|.+.+.+.|++|+.+++|++|..+ ++.+.+|++ .++.+++||.||.|++.+.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 456677888888889999999999999984 555655766 3456899999999998764
No 57
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.42 E-value=3e-12 Score=133.48 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=49.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc--CCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~--~G~--~i~ad~VI~a~~~~~ 330 (530)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ +|.||.||+|++.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 56788899999999999999999999998544777777665 675 689999999998754
No 58
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.41 E-value=1.6e-11 Score=120.67 Aligned_cols=40 Identities=30% Similarity=0.325 Sum_probs=36.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG 94 (530)
..++||+|||||++|+++|++|+++|++|+|||++...+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3568999999999999999999999999999999876554
No 59
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.41 E-value=1.4e-12 Score=135.61 Aligned_cols=59 Identities=27% Similarity=0.295 Sum_probs=49.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc--CCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~--~G~--~i~ad~VI~a~~~~~ 330 (530)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ +|+||.||+|++.+.
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 46788899999999999999999999998543777777765 675 689999999998765
No 60
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.40 E-value=2.7e-11 Score=125.38 Aligned_cols=64 Identities=17% Similarity=0.204 Sum_probs=48.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCC--EEEEEEcCC---cEEecCEEEEccChHH-HhhhC
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT--VKNFLLTNG---NVIDGDAYVFATPVDI-LKLQL 335 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~--~~~v~~~~G---~~i~ad~VI~a~~~~~-~~~ll 335 (530)
..+...|.+.+.+.|++|+++++|++|+.++++. .+.|++.++ .+++||.||.|.+.++ +++.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 4566778888888899999999999999865511 234566555 6899999999998864 45555
No 61
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.40 E-value=2.3e-11 Score=124.62 Aligned_cols=58 Identities=21% Similarity=0.174 Sum_probs=49.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc---CCc--EEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~---~G~--~i~ad~VI~a~~~~~ 330 (530)
+..++..|.+.+.++|++|+++++|++|..++ .+++|++. +|+ +++||.||+|+++|+
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 67899999999999999999999999998743 45677773 575 799999999999986
No 62
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.40 E-value=6.9e-14 Score=152.23 Aligned_cols=58 Identities=24% Similarity=0.237 Sum_probs=51.6
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+..++..|.+.++++|++|+++++|++|..+ ++.+++|++.+| +++||+||+|++.++
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 5688999999999999999999999999874 555667888888 899999999999987
No 63
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.38 E-value=1.6e-12 Score=129.27 Aligned_cols=57 Identities=16% Similarity=0.303 Sum_probs=48.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+| +++||.||+|++.++
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECCCCcc
Confidence 4577888999999999999999999999875443 46888888 899999999999875
No 64
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.38 E-value=1.8e-11 Score=127.04 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc-CC--cEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~-~G--~~i~ad~VI~a~~~~~ 330 (530)
..+...|.+.+++.|++++.+++|++|..+ ++..+.|++. +| .+++||.||.|+|.+.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 456677888888899999999999999874 4445578776 66 5799999999999864
No 65
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.37 E-value=1.8e-11 Score=126.83 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=48.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE--cCC-cEEecCEEEEccChH-HHhhhCC
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NVIDGDAYVFATPVD-ILKLQLP 336 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~--~~G-~~i~ad~VI~a~~~~-~~~~ll~ 336 (530)
..+.+.|.+.+.+.|++|+.+++|++|+.++++.. |++ .+| ++++||.||.|.+.+ .+++.+.
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~--v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE--VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE--EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE--EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 34556678888888999999999999987655533 555 778 689999999999875 4455553
No 66
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.33 E-value=6.2e-10 Score=113.65 Aligned_cols=63 Identities=11% Similarity=-0.017 Sum_probs=48.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc---EEecCEEEEccChHH-HhhhCC
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQLP 336 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~---~i~ad~VI~a~~~~~-~~~ll~ 336 (530)
..+.+.|.+.+.+.|++|+++++|++|+.++++ + .|++.+|+ +++||.||.|.+.++ +++.+.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 345666788888889999999999999985554 3 47776664 799999999998864 455553
No 67
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.32 E-value=2.8e-10 Score=116.29 Aligned_cols=62 Identities=11% Similarity=0.088 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc---EEecCEEEEccChHH-HhhhCC
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQLP 336 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~---~i~ad~VI~a~~~~~-~~~ll~ 336 (530)
.+.+.|.+.+.+.|++|+++++|++|+.++++ + .|++.+|+ +++||.||.|.+.++ +++.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 45566778888889999999999999985544 3 46666664 799999999998854 455553
No 68
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.31 E-value=1.9e-10 Score=119.69 Aligned_cols=59 Identities=24% Similarity=0.289 Sum_probs=48.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC------C---------cEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~------G---------~~i~ad~VI~a~~~~~ 330 (530)
..|.+.|.+.+++.|++|+.++.|++|..++++++++|++.+ | .+++||.||.|++.+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 356677888888889999999999999986667777787763 3 5899999999999864
No 69
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.30 E-value=4.2e-12 Score=124.26 Aligned_cols=188 Identities=13% Similarity=0.041 Sum_probs=102.2
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhCCccccccHHHHHHhc
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 350 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~ 350 (530)
+..++..|.+.++++|++|+. ++|++|... + .++||.||+|++.++ ..+++..
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~-~------------~~~a~~VV~A~G~~s-~~l~~~~------------ 193 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEV-A------------REGADVIVNCTGVWA-GALQRDP------------ 193 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH-H------------HTTCSEEEECCGGGG-GGTSCCT------------
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh-h------------cCCCCEEEECCCcCh-HhhcCCC------------
Confidence 678999999999999999998 899888542 1 278999999999998 5555431
Q ss_pred cCCccEEEEEEEeccccccccCccccccCC----cceeeeccCcccccccC-CCccEEEEEeeCccccCCCChhHHHHHH
Q 009635 351 LVGVPVINIHIWFDRKLKNTYDHLLFSRSS----LLSVYADMSLTCKEYYN-PNQSMLELVFAPAEEWISCSDSEIIDAT 425 (530)
Q Consensus 351 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~e~~~~~~ 425 (530)
+..++....+.++.+. ....++...+ -...|. .| ++..++..... ...+....+++..+.+
T Consensus 194 -~l~p~rg~~~~~~~~~---~~~~~~~~~~~~~~~~~~y~---------~p~~~~~~iGg~~~-~~~~~~~~~~~~~~~l 259 (351)
T 3g3e_A 194 -LLQPGRGQIMKVDAPW---MKHFILTHDPERGIYNSPYI---------IPGTQTVTLGGIFQ-LGNWSELNNIQDHNTI 259 (351)
T ss_dssp -TCEEEEEEEEEEECTT---CCSEEEECCTTTCTTCSCEE---------EECSSCEEEECCCE-ETCCCCSCCHHHHHHH
T ss_pred -ceeecCCcEEEEeCCC---cceEEEeccccCCCCceeEE---------EeCCCcEEEeeeee-cCCCCCCCCHHHHHHH
Confidence 1122323333443321 1111111000 000111 11 12222221111 1233333456778889
Q ss_pred HHHHHHhCCCCcccccccceEEEEEEeecCCceeecCCCCCCC-CCC-CCCC-CCceEEecccccCCCCCcHHHHHHHHH
Q 009635 426 MKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC-RPL-QRSP-VEGFYLAGDYTKQKYLASMEGAVLSGK 502 (530)
Q Consensus 426 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~-~~~~-~~~l~~aG~~~~~~~~~~i~gA~~sg~ 502 (530)
++.+.+++|..... .+.+ .|. +.....+. ... .+. ...+ .+|+|++..+.. .++.-|...|+
T Consensus 260 ~~~~~~~~P~l~~~-----~i~~-~w~----G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~ap~~g~ 324 (351)
T 3g3e_A 260 WEGCCRLEPTLKNA-----RIIG-ERT----GFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIHWGCAL 324 (351)
T ss_dssp HHHHHHHCGGGGGC-----EEEE-EEE----EEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHHHHHHH
T ss_pred HHHHHHhCCCccCC-----cEee-eeE----eeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhhHHHHH
Confidence 99999999964321 2222 221 11111222 100 000 0112 568888765433 36888888999
Q ss_pred HHHHHHHHhhhh
Q 009635 503 LCAQAIVQDYVL 514 (530)
Q Consensus 503 ~aA~~vl~~~~~ 514 (530)
.+|+.|...++.
T Consensus 325 ~la~li~~~~~~ 336 (351)
T 3g3e_A 325 EAAKLFGRILEE 336 (351)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999887764
No 70
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.26 E-value=5.7e-11 Score=123.51 Aligned_cols=59 Identities=29% Similarity=0.348 Sum_probs=47.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc--CCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~--~G~--~i~ad~VI~a~~~~~ 330 (530)
..+...|.+.+++.|++|+++++|++|..++++++++|++. +|+ +|.||.||+|++.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 46788899999999999999999999987443777777765 674 689999999998654
No 71
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.25 E-value=2.3e-10 Score=117.53 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEE--EcCCc--EEecCEEEEccChHH-HhhhC
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL--LTNGN--VIDGDAYVFATPVDI-LKLQL 335 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~--~~~G~--~i~ad~VI~a~~~~~-~~~ll 335 (530)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|+ +.+|+ +++||.||.|++.+. +.+.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 356667888888889999999999999984 55554454 44574 799999999999864 33344
No 72
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.25 E-value=3.2e-09 Score=107.38 Aligned_cols=58 Identities=21% Similarity=0.127 Sum_probs=45.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc---CCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~---~G~--~i~ad~VI~a~~~~~ 330 (530)
..+.+.|.+.+.+.|++|+++++|++|..+ ++.+++|++. +|+ +++||.||.|+|.+.
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 345667888888889999999999999874 5555555554 675 799999999999864
No 73
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.24 E-value=4e-10 Score=111.96 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE-cCCc--EEecCEEEEccChHH-HhhhCC
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVDI-LKLQLP 336 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~-~~G~--~i~ad~VI~a~~~~~-~~~ll~ 336 (530)
.+.+.|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ +++||.||.|.+.++ +++.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4556677777778999999999999987433333 4666 6886 699999999999864 344553
No 74
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=4.8e-11 Score=118.25 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=48.2
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecC---CCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~---~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.|.+.+++.|++|+++++|++|..++ ++. +.|++.+| +++||+||+|++.+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCcc
Confidence 56788889999999999999999999998741 333 36888777 899999999998876
No 75
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.23 E-value=1.6e-10 Score=120.20 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=49.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (530)
..++..|.+.+++.|++|+++++|++|..++++++++|.. .+|+ ++.|+.||+||+.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 5678889999988999999999999999744677777764 4565 589999999998865
No 76
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.22 E-value=3.2e-12 Score=127.52 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=44.9
Q ss_pred CccchHHHHHHHHHcCcEEEecceee---------EEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~---------~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+..++..|.+.+++.|++|+++++|+ +|..+ ++.+ .|++.+| +++||.||+|++.++
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 56788999999999999999999999 88764 4444 6778777 899999999999985
No 77
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.20 E-value=9.8e-11 Score=120.58 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=44.9
Q ss_pred ccchHHHHHHHHH-cCcEEEecceeeEEEecCCC------CEEEEEEc---CCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~-~g~~i~~~t~V~~I~~~~~g------~~~~v~~~---~G~--~i~ad~VI~a~~~~~ 330 (530)
..+...|.+.+++ .|++|++++.|++|..++++ ++++|.+. +|+ ++.|+.||+||+.+.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 5677788888888 68999999999999974334 77777764 564 689999999998865
No 78
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.19 E-value=1.1e-10 Score=116.79 Aligned_cols=44 Identities=16% Similarity=0.266 Sum_probs=37.2
Q ss_pred CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 286 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 286 g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+.+|+++++|++++..+++.+ .|++.+|++++||.||-|-|.++
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTC
T ss_pred cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCc
Confidence 467999999999987666654 68899999999999999998753
No 79
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.17 E-value=5.5e-09 Score=110.07 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=46.7
Q ss_pred cchHHHHHHHHHcCc--EEEecceeeEEEecCC--CCEEEEEEc------CC--cEEecCEEEEccChHH-HhhhCCc
Q 009635 273 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--GTVKNFLLT------NG--NVIDGDAYVFATPVDI-LKLQLPE 337 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~--~i~~~t~V~~I~~~~~--g~~~~v~~~------~G--~~i~ad~VI~a~~~~~-~~~ll~~ 337 (530)
.+.+.|.+.+.+.|+ +|+++++|++|+.+++ +..+.|++. +| ++++||.||.|.+.++ +++.+..
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 219 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGR 219 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCC
Confidence 455667888888887 9999999999997542 222345543 46 5799999999998854 4566543
No 80
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.17 E-value=2.2e-10 Score=120.18 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=48.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (530)
..++..|.+.+.+.|++|++++.|++|.. +++++++|.+ .+|+ .+.|+.||+||+.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 46888899999889999999999999987 4567777765 4675 489999999998865
No 81
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.14 E-value=7.3e-10 Score=114.05 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=51.3
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.|.+.+++.|++++.+ +|++|..++++.++.|++.+|++++||.||.|+|.++
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 3577888888888899999999 9999988666777789999998899999999999975
No 82
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.12 E-value=3.5e-10 Score=112.55 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=35.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG 94 (530)
..+||+|||||++||++|+.|++.|++|+|+|++...+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 467999999999999999999999999999999876554
No 83
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.12 E-value=3.9e-10 Score=117.41 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=48.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (530)
..++..|.+.+.+.|++|++++.|++|.. +++++.+|.. .+|+ .+.|+.||+||+.+.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 47888899998888999999999999987 4677777765 3565 689999999998875
No 84
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.12 E-value=2.8e-10 Score=117.13 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=43.1
Q ss_pred HHHHHHHHcCc--EEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 277 PIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 277 ~l~~~l~~~g~--~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.|+ .|+++++|+++..++++..+.|++.+|+++.||+||+|+|.+.
T Consensus 92 ~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 92 YLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 34455556676 7999999999998666555678999998899999999999754
No 85
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.10 E-value=2.7e-10 Score=117.48 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=38.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
...+||+|||||++|+++|+.|++.|++|+|+|+++.+||...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWY 61 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 3467999999999999999999999999999999999998553
No 86
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.10 E-value=1.1e-10 Score=116.20 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=50.6
Q ss_pred ccchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEE-EEEEcCCcEEecCEEEEccChHH-HhhhCC
Q 009635 272 ERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQLP 336 (530)
Q Consensus 272 ~~l~~~l~~~l~~~-g~~i~~~t~V~~I~~~~~g~~~-~v~~~~G~~i~ad~VI~a~~~~~-~~~ll~ 336 (530)
..+.+.|.+.+++. |++|+++++|++|..++++ ++ .|++.+|++++||.||.|++.++ +++.+.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 46667788888887 8999999999999985544 32 57888898999999999999854 445553
No 87
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.10 E-value=1.3e-09 Score=108.21 Aligned_cols=61 Identities=25% Similarity=0.341 Sum_probs=45.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCccc-CceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL-GGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~-GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (530)
..+||+|||||++||++|+.|++.|++|+|+|++... .+... | + ...+...++++++|+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~------------g--~--~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGT------------G--I--VVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSC------------E--E--ECCHHHHHHHHHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc------------c--c--ccChhHHHHHHHcCCcc
Confidence 4579999999999999999999999999999998653 11110 0 0 01355678888988764
No 88
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.09 E-value=9.6e-10 Score=113.75 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=51.0
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.|.+.+++.|++++.+ .|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 4577888999998899999999 8999988666766778898898899999999999875
No 89
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.09 E-value=3.6e-10 Score=106.68 Aligned_cols=40 Identities=33% Similarity=0.425 Sum_probs=36.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCcEEEEecCcccCce
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGK 95 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~V~vlEa~~~~GG~ 95 (530)
.++||+|||||++|+++|+.|++. |.+|+|+|++..+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 457999999999999999999997 9999999999888764
No 90
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.08 E-value=1e-09 Score=108.42 Aligned_cols=59 Identities=24% Similarity=0.348 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH-HhhhC
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI-LKLQL 335 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~-~~~ll 335 (530)
..+.+.|.+.+.+.|++|+++++|++|+. ++ .|++.+|++++||.||.|++.+. +++.+
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHHHHh
Confidence 45667788888888999999999999986 44 37788898999999999998854 34444
No 91
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.07 E-value=4.2e-11 Score=104.03 Aligned_cols=103 Identities=20% Similarity=0.153 Sum_probs=74.6
Q ss_pred ccccCCCChhHHHHHHHHHHHHhCCCCcccccccceE--EEEEEeecCCc--eeec-CCCC-CCCCCCCCCCCCceEEec
Q 009635 410 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI--VKYHVVKTPRS--VYKT-IPNC-EPCRPLQRSPVEGFYLAG 483 (530)
Q Consensus 410 ~~~~~~~~~e~~~~~~~~~l~~~~p~~~~~~~~~~~~--~~~~~~~~p~~--~~~~-~~~~-~~~~~~~~~~~~~l~~aG 483 (530)
+..|..++++++++.++++|.++|+... . . .... ...+|...|+. .|.+ .++. ....+.+.+|.++|||||
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~-~-~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAG 124 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI-E-V-FYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAG 124 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG-G-G-TEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECS
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc-H-h-hccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEE
Confidence 4667788999999999999999996432 1 1 1123 55667677774 3543 3442 122345567789999999
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHHHHHhhhhHh
Q 009635 484 DYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 516 (530)
Q Consensus 484 ~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~~~ 516 (530)
++++. +.|+|+||++||++||++|++.++...
T Consensus 125 e~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~~ 156 (181)
T 2e1m_C 125 EHVSL-KHAWIEGAVETAVRAAIAVNEAPVGDT 156 (181)
T ss_dssp GGGTT-STTSHHHHHHHHHHHHHHHHTCCC---
T ss_pred HHHcC-CccCHHHHHHHHHHHHHHHHHHhccCC
Confidence 99996 889999999999999999999887533
No 92
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.07 E-value=1.9e-10 Score=117.32 Aligned_cols=57 Identities=21% Similarity=0.230 Sum_probs=47.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++.+|+++.||.||+|++...
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 3466778888888999999999999998743 333 68889998999999999998754
No 93
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.07 E-value=2.9e-10 Score=110.35 Aligned_cols=45 Identities=38% Similarity=0.495 Sum_probs=38.6
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC----cccCceeee
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----DVLGGKIAA 98 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~----~~~GG~~~~ 98 (530)
.+..+||+|||||++||++|+.|++.|++|+|+|++ ..+||.+..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 346689999999999999999999999999999994 478887654
No 94
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.06 E-value=1.2e-08 Score=105.52 Aligned_cols=61 Identities=25% Similarity=0.255 Sum_probs=46.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (530)
.++||+|||||++||++|..|++.|.+|+|||++...+...+. . ...+...++++++|+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~------~----------~l~~~~~~~l~~lGl~~ 85 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV------G----------TIGPRSMELFRRWGVAK 85 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC------C----------EECHHHHHHHHHTTCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce------e----------eeCHHHHHHHHHcCChH
Confidence 3579999999999999999999999999999998766432211 0 11244567778888653
No 95
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.04 E-value=7.5e-10 Score=108.28 Aligned_cols=41 Identities=32% Similarity=0.562 Sum_probs=37.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~ 43 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ 43 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 47999999999999999999999999999999999888643
No 96
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.04 E-value=4.1e-09 Score=109.12 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=51.3
Q ss_pred CccchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~-g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.|.+.+++. |++++++ +|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 356888899999888 9999999 9999987666777789999998899999999999875
No 97
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.04 E-value=3.1e-09 Score=109.40 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=48.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCE--EEEEEcCCc-EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~--~~v~~~~G~-~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|+++++|++|..++++++ +.|++.+|+ ++.||.||+|++...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 35667788889999999999999999987545543 357888887 899999999998653
No 98
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.03 E-value=9.6e-10 Score=112.21 Aligned_cols=40 Identities=33% Similarity=0.404 Sum_probs=36.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG 94 (530)
+..+||+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4578999999999999999999999999999999988764
No 99
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.02 E-value=1.5e-09 Score=103.39 Aligned_cols=41 Identities=34% Similarity=0.426 Sum_probs=37.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++||++|+.|+++ |++|+|+|++..+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 468999999999999999999997 99999999998887643
No 100
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.02 E-value=1.1e-09 Score=113.27 Aligned_cols=43 Identities=28% Similarity=0.526 Sum_probs=39.3
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
.+..+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 3456899999999999999999999999999999999999864
No 101
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.02 E-value=1e-09 Score=114.26 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=47.4
Q ss_pred ccchHHHHHHHHHcC-cEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g-~~i~~~t~V~~I~~~~~g~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (530)
..+...|.+.+.+.| ++|++++.|++|..+ ++++++|.. .+|+ ++.|+.||+|++.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 467788888888888 999999999999874 566666653 5675 699999999998865
No 102
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.01 E-value=1.5e-09 Score=110.06 Aligned_cols=56 Identities=23% Similarity=0.208 Sum_probs=44.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE--cCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~--~~G~~i~ad~VI~a~~~~~ 330 (530)
..+...|.+.+++.|++|+.+++| +|..+ ++++.+|.. .+| ++.||.||+||+.+.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 467788888887789999999999 99874 566666654 344 688999999998865
No 103
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.01 E-value=5.4e-09 Score=107.71 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=49.7
Q ss_pred CccchHHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~-~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.|.+.+++ .|++++.+ .|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 35677888888888 89999999 5999987656776678888877899999999999875
No 104
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.00 E-value=1.1e-09 Score=109.37 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=49.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|++++.|++|.. +++++..|++.+|+++.||.||+|++...
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 45667778888899999999999999987 45677789999999999999999998754
No 105
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.99 E-value=2.4e-09 Score=97.80 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~-g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+...|.+.+++. |++++ +++|++|..+ ++.++.|++.+|++++||.||+|++.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 3445577777776 89998 6799999874 4556678888898899999999999864
No 106
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.99 E-value=2.7e-09 Score=109.41 Aligned_cols=59 Identities=14% Similarity=0.001 Sum_probs=47.6
Q ss_pred cchHHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhh
Q 009635 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 333 (530)
Q Consensus 273 ~l~~~l~~~l~~-~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ 333 (530)
.+...|.+.+++ .|++| +++.|++|.. +++.+++|.+.+|+++.||.||+|||.+....
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGV 183 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTCE
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccCc
Confidence 455667777777 48999 5789999987 46677789999998999999999999875433
No 107
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.98 E-value=2.1e-09 Score=110.72 Aligned_cols=59 Identities=8% Similarity=0.046 Sum_probs=47.6
Q ss_pred cchHHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhh
Q 009635 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 333 (530)
Q Consensus 273 ~l~~~l~~~l~~-~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ 333 (530)
.+...|.+.+++ .|++| +++.|++|.. +++.+++|++.+|.++.||.||+|+|.+....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~ 184 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGK 184 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTCCE
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCccCc
Confidence 456677777877 58999 6789999987 46677789999998899999999999876433
No 108
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.97 E-value=1.9e-09 Score=105.71 Aligned_cols=41 Identities=22% Similarity=0.283 Sum_probs=37.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++|+++|+.|++.|++|+|+|+++.+||.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 46899999999999999999999999999999998888754
No 109
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.97 E-value=1.8e-09 Score=111.17 Aligned_cols=41 Identities=37% Similarity=0.550 Sum_probs=38.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW 48 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 46799999999999999999999999999999999999864
No 110
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.97 E-value=4.4e-09 Score=100.37 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=33.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG 94 (530)
+.+||+|||||++||+||+.|++.|++|+|+|++. .||
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg 42 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRN 42 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCC
Confidence 46899999999999999999999999999999864 344
No 111
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.96 E-value=9.4e-10 Score=109.54 Aligned_cols=58 Identities=17% Similarity=0.213 Sum_probs=49.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|++++.|++|..+ ++++.+|++.+|+++.||.||+|++...
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 456677888888999999999999999873 5667789999999999999999998754
No 112
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.96 E-value=5.9e-09 Score=98.69 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++||++|+.|++. |++|+|+|++..+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 456999999999999999999998 99999999999888643
No 113
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.96 E-value=1.7e-09 Score=109.68 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=48.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEE-EcCCcEEecCEEEEccChHHHhh
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPVDILKL 333 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~-~~~G~~i~ad~VI~a~~~~~~~~ 333 (530)
..+.+.+.+.++++|++|+++++|++|..++++. +.|+ +.+|+ +.+|.||+|++......
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 4556778888899999999999999998754554 3688 88896 99999999998754333
No 114
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.95 E-value=5.2e-09 Score=101.39 Aligned_cols=41 Identities=27% Similarity=0.407 Sum_probs=37.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++|+++|+.|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 35799999999999999999999999999999998888754
No 115
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.95 E-value=4.3e-09 Score=110.67 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHc-Cc-EEEecceeeEEEecCC--CCEEEEEE---cCCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~-g~-~i~~~t~V~~I~~~~~--g~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (530)
..+...|.+.+++. |+ +|++++.|++|..+++ +++++|.. .+|+ +|.|+.||+||+.+.
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 45677888888887 99 9999999999987533 27877764 4564 689999999998765
No 116
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.94 E-value=3.6e-09 Score=102.27 Aligned_cols=40 Identities=30% Similarity=0.401 Sum_probs=37.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
.+||+|||||++||++|+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4799999999999999999999999999999999988765
No 117
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.92 E-value=2.2e-07 Score=97.98 Aligned_cols=61 Identities=26% Similarity=0.325 Sum_probs=45.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-----CCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLAD-----AGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~ 130 (530)
..+||+|||||++||++|..|++ .|++|+|+|++....... .+ . +..+...++++++|+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~g------ra-------~---~l~~~tle~l~~lGl 70 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNG------QA-------D---GLQCRTLESLKNLGL 70 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSC------SC-------C---EECHHHHHHHHTTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCC------ce-------e---EEChHHHHHHHHCCC
Confidence 35799999999999999999999 999999999975432100 00 0 123456788888887
Q ss_pred CC
Q 009635 131 ND 132 (530)
Q Consensus 131 ~~ 132 (530)
..
T Consensus 71 ~~ 72 (665)
T 1pn0_A 71 AD 72 (665)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 118
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.92 E-value=5.9e-09 Score=104.05 Aligned_cols=37 Identities=43% Similarity=0.641 Sum_probs=34.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCc-EEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~-V~vlEa~~~~G 93 (530)
.+||+|||||++||++|+.|++.|.+ |+|+|++..++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 57999999999999999999999999 99999987654
No 119
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.92 E-value=3.7e-09 Score=112.50 Aligned_cols=45 Identities=33% Similarity=0.530 Sum_probs=41.3
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeee
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~ 98 (530)
.+..+||+|||||++||+||+.|+++|++|+|+|+++.+||.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 456789999999999999999999999999999999999998654
No 120
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.91 E-value=8.5e-09 Score=99.20 Aligned_cols=40 Identities=30% Similarity=0.455 Sum_probs=36.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
..+||+|||||++||++|+.|++.|++|+|+|++ +||.+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~ 53 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLT 53 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGG
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeec
Confidence 3579999999999999999999999999999998 777543
No 121
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.91 E-value=3.1e-09 Score=104.49 Aligned_cols=52 Identities=15% Similarity=-0.040 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 276 ~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.|++++++++|++|..+++++ .|.+.+| ++.+|+||+|++.+.
T Consensus 92 ~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 92 EYLQVVANHYELNIFENTVVTNISADDAYY--TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECSSSE--EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEECCCeE--EEEeCCC-EEEeCEEEECCCCCC
Confidence 345555667799999999999998754442 4777777 699999999999875
No 122
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.90 E-value=7.6e-09 Score=108.39 Aligned_cols=59 Identities=12% Similarity=0.141 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHc--CcEEEecceeeEEEecCC--CCEEEEEE---cCCc--EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~--g~~i~~~t~V~~I~~~~~--g~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (530)
..+...|.+.+++. |++|+.++.|++|..+++ |++++|.. .+|+ .|.|+.||+||+...
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 57778888888887 999999999999988544 48888764 3453 589999999998754
No 123
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.89 E-value=7.7e-09 Score=105.70 Aligned_cols=42 Identities=26% Similarity=0.412 Sum_probs=37.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
.++||+|||||++|++||+.|++.|++|+|+|+++.+||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 458999999999999999999999999999999999999654
No 124
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.89 E-value=6.1e-09 Score=99.87 Aligned_cols=42 Identities=38% Similarity=0.612 Sum_probs=37.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEE-EecCcccCceeee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARDVLGGKIAA 98 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~v-lEa~~~~GG~~~~ 98 (530)
.++||+|||||++||+||+.|++.|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 567999999999999999999999999999 999 677887643
No 125
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.87 E-value=8.5e-10 Score=110.01 Aligned_cols=57 Identities=16% Similarity=0.251 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|++++.|++|..+ +.+..|++.+|+++.||.||+|++...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 345566778888899999999999999863 344578899999999999999998754
No 126
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.86 E-value=8.1e-09 Score=106.32 Aligned_cols=56 Identities=13% Similarity=0.200 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~-g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+...|.+.+++. |++|+ +..|+.|.. +++.+.+|.+.+|+++.||.||+|+|.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4556677777774 89995 568999987 45667779999998999999999999875
No 127
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.86 E-value=2.3e-09 Score=109.43 Aligned_cols=57 Identities=25% Similarity=0.316 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.++++|++|++++.|++|..++++. +.|++.+|+++.+|.||+|++...
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCc
Confidence 456778888889999999999999998744443 468888998899999999998754
No 128
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.85 E-value=2.7e-09 Score=107.89 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=45.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.+++.|++|+++++|++|... ++.+ .|.+.+| ++.||.||+|++...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 445667788888899999999999999863 4445 6888777 899999999998754
No 129
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.83 E-value=1.3e-08 Score=102.68 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.++++|++|+++++|++|..++++. +.|++.+|+++.+|.||+|++...
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCc
Confidence 456677888888999999999999998744443 368888998899999999998654
No 130
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.82 E-value=2.6e-08 Score=86.99 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 276 ~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+.+.+.+++.|++++++ +|++|..++++ +.|++.+| ++.||.||+|++...
T Consensus 60 ~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 60 RRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECCC-EEEECEEEECCCCCC
Confidence 34666677789999999 99999875444 35888888 899999999999763
No 131
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.82 E-value=5.3e-09 Score=106.21 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=35.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-----CcEEEEecCcccC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAG-----HKPLLLEARDVLG 93 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G-----~~V~vlEa~~~~G 93 (530)
..+||+|||||++||++|..|++.| .+|+|||+++.+|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4579999999999999999999999 9999999998877
No 132
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.80 E-value=2.8e-08 Score=101.39 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=42.5
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 277 ~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
++.+.++++|++|++++.|++|..+ +.+..|++.+|+++.||.||+|++...
T Consensus 262 gle~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 262 EVIQELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 3447788889999999999999853 334567788898999999999998764
No 133
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.80 E-value=1.7e-08 Score=102.12 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=46.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|+++++|++|..++++ +.|++.+|+++.+|.||+|++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCCeEEEcCEEEECcCCCc
Confidence 355677888888899999999999999874332 357777888999999999998765
No 134
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.79 E-value=4.7e-08 Score=102.26 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=43.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCh
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 328 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~ 328 (530)
..+.+.+.+.+++.|++|+++++|++|..+ ++ .|++.+|+++.+|.||+|++.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCC
Confidence 355677888888999999999999999853 22 367788989999999999975
No 135
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=2.4e-08 Score=102.18 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcE-EecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~-i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|++++.|++|..++++. +.|++.+|++ +.+|.||+|++...
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCc
Confidence 3456677888889999999999999998744443 3578888987 99999999998654
No 136
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.79 E-value=6e-08 Score=98.56 Aligned_cols=57 Identities=19% Similarity=0.294 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.+++.|++|+++++|++|.. +++.+ .|++.+|+++.||.||+|++...
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKV-ARVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBE-EEEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeE-EEEEeCCCEEEcCEEEECCCCCc
Confidence 34567778888899999999999999987 35554 47788888999999999998753
No 137
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.79 E-value=5.3e-09 Score=106.45 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC-cEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G-~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.+++.|++|++++.|++|..++++..+.|++.+| +++.+|.||+|++...
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 456677888888999999999999998744453346888888 7899999999998643
No 138
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.78 E-value=3.1e-08 Score=95.47 Aligned_cols=41 Identities=44% Similarity=0.626 Sum_probs=36.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
..+||+|||||++|+++|+.|++.|++|+|+|++ .+||.+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 4579999999999999999999999999999998 6777543
No 139
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.78 E-value=1.9e-08 Score=101.44 Aligned_cols=42 Identities=38% Similarity=0.427 Sum_probs=38.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~~~GG~~~ 97 (530)
..+||+|||||++||++|+.|++.|. +|+|+|+++.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 46799999999999999999999999 9999999999988654
No 140
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.78 E-value=2.5e-08 Score=100.92 Aligned_cols=56 Identities=20% Similarity=0.297 Sum_probs=46.1
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc-EEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~-~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.++++|++|+++++|++|..++++ ..|++.+|+ ++.+|.||+|++...
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 45566778888899999999999999864444 468888998 899999999998754
No 141
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.77 E-value=7e-09 Score=106.20 Aligned_cols=60 Identities=15% Similarity=0.152 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhh
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 334 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l 334 (530)
.+.+.+.+.++++|++|+++++|++|..+++ .+ .|++.+|+++.||.||+|++......+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTGA-GV-LVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECSS-SE-EEEETTSCEEEESEEEECCCEEECCSS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-EE-EEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 4567788888999999999999999987433 33 577888888999999999988653434
No 142
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.77 E-value=5.4e-09 Score=106.71 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.++++|++|++++.|++|..++++. +.|++.+|+++.+|.||+|++...
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCcc
Confidence 456778888889999999999999998744343 468888998899999999998653
No 143
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.76 E-value=2.8e-08 Score=95.10 Aligned_cols=38 Identities=37% Similarity=0.643 Sum_probs=34.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-cEEEEecCcccCcee
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~~~GG~~ 96 (530)
+||+|||||++|+++|+.|++.|+ +|+|+|++ .+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 699999999999999999999999 99999995 566644
No 144
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.76 E-value=2.2e-08 Score=101.99 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=45.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC-------CcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------GNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~-------G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.+++.|++|++++.|++|..++++..+.|++.+ |+++.+|.||+|++...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 345667788888899999999999999875555233566664 25799999999998643
No 145
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.76 E-value=1.3e-08 Score=103.66 Aligned_cols=41 Identities=32% Similarity=0.399 Sum_probs=37.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
.++||+|||||++|++||+.|++.|++|+|+|++..+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 57899999999999999999999999999999998777754
No 146
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.74 E-value=3.1e-08 Score=95.17 Aligned_cols=57 Identities=11% Similarity=0.087 Sum_probs=43.6
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC----C--cEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~----G--~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.+++.|++|++++.|++|..+ ++.+.+|++.+ | +++.+|.||+|++...
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 34556677777889999999999999874 44555666654 4 5799999999998653
No 147
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.74 E-value=7.1e-08 Score=92.18 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=39.7
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCC-CCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 278 l~~~l~~~g~~i~~~t~V~~I~~~~~-g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+.+.+.+.|++++.+++|++|..+.+ +....|.+.+|+++.+|+||+|++...
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 34444566899999999999975322 223457888888899999999999753
No 148
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.73 E-value=4.3e-08 Score=92.98 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=35.0
Q ss_pred CCCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhh
Q 009635 472 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 514 (530)
Q Consensus 472 ~~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~ 514 (530)
+++..+|||.+||.+.. +..+..|+..|..||..+.+.+..
T Consensus 253 ~~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 253 KQTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp CBCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 45678999999998874 368999999999999999988764
No 149
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.71 E-value=3.9e-08 Score=95.08 Aligned_cols=33 Identities=39% Similarity=0.563 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa 88 (530)
..+||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 357999999999999999999999999999998
No 150
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.71 E-value=2.4e-08 Score=100.12 Aligned_cols=58 Identities=16% Similarity=0.183 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEec-CCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~-~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.+++.|++|++++.|++|... +++.+..|++.+|+++.+|.||+|++...
T Consensus 192 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 192 PVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 45566778888899999999999999852 24556678889998999999999998753
No 151
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.70 E-value=9.3e-08 Score=96.69 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=38.0
Q ss_pred CeEEEECCChHHHHHHHHHHH---CCCc---EEEEecCcccCceeee
Q 009635 58 LKVVIAGAGLAGLSTAKYLAD---AGHK---PLLLEARDVLGGKIAA 98 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~---~G~~---V~vlEa~~~~GG~~~~ 98 (530)
+||+|||||++||+||..|++ .|++ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999987643
No 152
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.67 E-value=1e-07 Score=96.81 Aligned_cols=43 Identities=37% Similarity=0.465 Sum_probs=39.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 3578999999999999999999999999999999988888654
No 153
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.66 E-value=7.8e-08 Score=97.90 Aligned_cols=42 Identities=38% Similarity=0.470 Sum_probs=38.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 357999999999999999999999999999999888888654
No 154
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.66 E-value=6.6e-08 Score=99.29 Aligned_cols=53 Identities=15% Similarity=0.232 Sum_probs=40.3
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCC-CCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 278 l~~~l~~~g~~i~~~t~V~~I~~~~~-g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+.+.+.+.|++++.+++|++|..+.+ +....|++.+|+++.+|+||+|++...
T Consensus 273 l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 273 LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 44455667899999999999975321 223468888898999999999999753
No 155
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.66 E-value=1.3e-07 Score=96.35 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc-----EEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~-----~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|++++.|++|...+++.+ .|++.+++ ++.+|.||+|++...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 34566778888899999999999999987555543 46665553 799999999998643
No 156
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.2e-07 Score=91.77 Aligned_cols=40 Identities=35% Similarity=0.574 Sum_probs=34.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCce
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~ 95 (530)
...+||+|||||++|+++|+.|++.|++|+|+|+. .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 45689999999999999999999999999999975 45553
No 157
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.65 E-value=2.1e-07 Score=92.66 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=43.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (530)
..+.+.+.+.+++.|+++++++.|++|+. ++ |++.+|+++.+|.||+|+|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCCC
Confidence 35667788888889999999999999963 22 678899899999999999764
No 158
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.65 E-value=8.5e-08 Score=94.37 Aligned_cols=44 Identities=16% Similarity=0.112 Sum_probs=36.3
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChH
Q 009635 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (530)
Q Consensus 282 l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (530)
+.++|++++++++|++|..+ + + .|++.+|+++.+|+||+||+..
T Consensus 72 ~~~~~i~~~~~~~V~~id~~-~-~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPN-N-K--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHTTCEEECSCCEEEEETT-T-T--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECC-C-C--EEEECCCCEEECCEEEEecCCC
Confidence 34568999999999999863 3 3 3788899899999999999973
No 159
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.65 E-value=5.6e-08 Score=99.03 Aligned_cols=42 Identities=36% Similarity=0.452 Sum_probs=38.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 358999999999999999999999999999999888888653
No 160
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.65 E-value=2.1e-07 Score=96.87 Aligned_cols=57 Identities=19% Similarity=0.377 Sum_probs=44.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEec------------------CCCCEEEEEEcCCcEEecCEEEEccChH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~------------------~~g~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (530)
..+.+.+.+.+++.|++|++++.|++|..+ +++.+ .+++.+|+++.||.||+|++..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCc
Confidence 345566777888899999999999999863 23433 5677888899999999999753
No 161
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.64 E-value=1.7e-07 Score=95.18 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=38.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 57999999999999999999999999999999988998764
No 162
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.64 E-value=1.9e-08 Score=101.69 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|+++++|++|.. +++++..|.+ +|+++.+|.||+|++...
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCCC
Confidence 34566778888899999999999999986 3455544555 777899999999998754
No 163
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.62 E-value=1.3e-08 Score=100.59 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.+++.|++|+++++|++|..++++ +.|++.+|+++.||.||+|++...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG--LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE--EEEEECCCCEEECCEEEECcCCCc
Confidence 345677888888899999999999999874332 468888998999999999998754
No 164
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.60 E-value=1.8e-07 Score=94.82 Aligned_cols=42 Identities=36% Similarity=0.423 Sum_probs=38.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~ 98 (530)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 579999999999999999999999999999999999987653
No 165
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.59 E-value=8.5e-08 Score=98.84 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHC-CCcEEEEecCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~V~vlEa~~ 90 (530)
..++|+||||||.+|+.+|.+|++. +.+|+||||..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4679999999999999999999975 89999999986
No 166
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.57 E-value=8e-07 Score=91.21 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+||+|||||++|++||..|++.|++|+|+|+++
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 46899999999999999999999999999999965
No 167
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.55 E-value=1.8e-07 Score=95.44 Aligned_cols=57 Identities=25% Similarity=0.274 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+...+.+.++++|++|++++.|++|..+ ++. +.|++.+|+++.||.||+|++...
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~-~~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGK-LLIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCe-EEEEECCCCEEECCEEEECCCCCc
Confidence 345667778888899999999999999863 343 368888998999999999998754
No 168
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=3.4e-07 Score=92.56 Aligned_cols=40 Identities=30% Similarity=0.414 Sum_probs=36.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
++||+|||||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 579999999999999999999999999999998 7787653
No 169
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.54 E-value=1.7e-07 Score=93.91 Aligned_cols=39 Identities=31% Similarity=0.448 Sum_probs=35.1
Q ss_pred CCeEEEECCChHHHHHHHHHHH--CCCcEEEEecCcccCce
Q 009635 57 PLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGK 95 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~--~G~~V~vlEa~~~~GG~ 95 (530)
++||+|||||++|+++|+.|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 3699999999999999999999 78999999999876653
No 170
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.54 E-value=3.3e-08 Score=95.27 Aligned_cols=42 Identities=33% Similarity=0.396 Sum_probs=38.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHH--CCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~--~G~~V~vlEa~~~~GG~~~ 97 (530)
.++||+|||||++||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 46799999999999999999985 4999999999999999764
No 171
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.53 E-value=8.9e-07 Score=90.24 Aligned_cols=42 Identities=29% Similarity=0.450 Sum_probs=36.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEec--------CcccCcee
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA--------RDVLGGKI 96 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa--------~~~~GG~~ 96 (530)
+.++||+|||||++|++||..|++.|++|+|+|+ ...+||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCee
Confidence 3568999999999999999999999999999998 44566654
No 172
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.53 E-value=4.3e-07 Score=92.01 Aligned_cols=40 Identities=30% Similarity=0.416 Sum_probs=36.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
++||+|||||++|+++|..|++.|++|+|+|++ .+||.+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 479999999999999999999999999999998 6777553
No 173
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.51 E-value=1.8e-07 Score=95.81 Aligned_cols=57 Identities=11% Similarity=0.013 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|+++++++.|.++...++ . +.|.+.+++++.+|.|++|++-..
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~-~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-K-ILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-E-EEEEETTSCEEEESEEEECSCEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCC-e-EEEEEcCCCeEEEEEEEEcccccC
Confidence 45667788889999999999999999997443 3 357788888999999999998643
No 174
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.51 E-value=2.4e-08 Score=99.42 Aligned_cols=52 Identities=23% Similarity=0.246 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.++++|++|++++.|++|. + + .|++.+|+++.+|.||+|++...
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCCc
Confidence 456677888889999999999999998 2 3 47788898999999999998753
No 175
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.45 E-value=7.3e-07 Score=90.82 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=42.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc----EEecCEEEEccCh
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPV 328 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~----~i~ad~VI~a~~~ 328 (530)
..+.+.+.+.|+++|++|++++.|++|+ +++....+...+|+ +|.||.||.|++.
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 4566777888899999999999999996 34444445556663 6999999999874
No 176
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.45 E-value=1.3e-06 Score=87.57 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=45.3
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 271 ~~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
...+.+.+.+.++++|+++++++.|+++.. + .|++.+|+++.+|.||+|++...
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCEEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEeceec
Confidence 356778889999999999999999999862 2 26788999999999999998643
No 177
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.44 E-value=2.6e-07 Score=95.34 Aligned_cols=37 Identities=32% Similarity=0.352 Sum_probs=33.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCC-CcEEEEecCcc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDV 91 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G-~~V~vlEa~~~ 91 (530)
..++|+||||||.||+.+|..|++.| .+|+||||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999997 79999999765
No 178
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.44 E-value=9.9e-07 Score=90.09 Aligned_cols=62 Identities=13% Similarity=0.036 Sum_probs=46.7
Q ss_pred cchHHHHHHHHHcC-cEEEecceeeEEEecCCC-CEEEEEEc--CC-----cEEecCEEEEccChHHHhhh
Q 009635 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 334 (530)
Q Consensus 273 ~l~~~l~~~l~~~g-~~i~~~t~V~~I~~~~~g-~~~~v~~~--~G-----~~i~ad~VI~a~~~~~~~~l 334 (530)
....++.+.+.++| ++|++++.|++|..++++ ++++|+.. +| .+++|+.||+|++......|
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 34556667777775 999999999999986534 78888874 56 36899999999988643443
No 179
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.43 E-value=1.5e-07 Score=90.03 Aligned_cols=41 Identities=34% Similarity=0.613 Sum_probs=36.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
.+|||+|||||++|++||..|++.|++|+|+|+. .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 4699999999999999999999999999999984 5677653
No 180
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.41 E-value=1.1e-06 Score=89.88 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=46.3
Q ss_pred cchHHHHHHHHHcC-cEEEecceeeEEEecCCC-CEEEEEEc--CC-----cEEecCEEEEccChHHHhhh
Q 009635 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 334 (530)
Q Consensus 273 ~l~~~l~~~l~~~g-~~i~~~t~V~~I~~~~~g-~~~~v~~~--~G-----~~i~ad~VI~a~~~~~~~~l 334 (530)
....+++..+.+++ ++|++++.|++|..++++ ++++|+.. +| .+++|+.||+|+++....+|
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 34456666666665 999999999999986545 68888874 45 36899999999988643443
No 181
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.40 E-value=7e-08 Score=95.95 Aligned_cols=45 Identities=7% Similarity=0.052 Sum_probs=37.4
Q ss_pred HHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChH
Q 009635 283 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (530)
Q Consensus 283 ~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (530)
+++|+++++++.|..++.+.++. .|++.+|+++.+|.||+++|..
T Consensus 213 ~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp TTCSEEEECTTTTCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HhcCcEEEeCceEEEEEecccce--EEEcCCCcEEEeeEEEEecCcC
Confidence 45789999999999998755554 4889999999999999988653
No 182
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.39 E-value=5.3e-07 Score=92.02 Aligned_cols=43 Identities=23% Similarity=0.162 Sum_probs=32.9
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
.++.+||||||+|++||++|..|.+.|...+++|+.+..|+.-
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 4466899999999999999999999888777888777666543
No 183
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.37 E-value=5.8e-07 Score=92.47 Aligned_cols=36 Identities=33% Similarity=0.335 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHH-CCCcEEEEecCccc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~-~G~~V~vlEa~~~~ 92 (530)
++|+||||||.+|+.+|.+|++ .|.+|+||||....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 68999999998654
No 184
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.36 E-value=1.9e-06 Score=87.50 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~~~G 93 (530)
.+||+|||||++|++||..|++. |.+|+|+|++...+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 57999999999999999999996 89999999986643
No 185
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.9e-06 Score=84.29 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..||+|||||++|++||..|++.| +|+|+|+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 459999999999999999999999 9999999754
No 186
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.34 E-value=2.4e-06 Score=88.01 Aligned_cols=37 Identities=32% Similarity=0.451 Sum_probs=32.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHH-CCCcEEEEecCcc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDV 91 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~-~G~~V~vlEa~~~ 91 (530)
.+++|+||||||.+|+..|.+|++ .|++|+|||+...
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 358999999999999999999998 5789999999754
No 187
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.34 E-value=2.5e-06 Score=85.85 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.8
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCcEEEEecCcccC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~~~G 93 (530)
+||+|||||++|++||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999997 89999999987644
No 188
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.32 E-value=1.1e-06 Score=88.32 Aligned_cols=34 Identities=38% Similarity=0.623 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHH---CCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLAD---AGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~---~G~~V~vlEa~~ 90 (530)
.+||+|||||++|++||+.|++ .|++|+|+|+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 5799999999999999999999 799999999975
No 189
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.30 E-value=9.5e-07 Score=88.42 Aligned_cols=33 Identities=33% Similarity=0.451 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCC--CcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G--~~V~vlEa~~ 90 (530)
++|||||||++|++||..|++.+ ++|+|+|+++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 48999999999999999999865 7899999874
No 190
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.28 E-value=4.6e-07 Score=86.63 Aligned_cols=36 Identities=33% Similarity=0.438 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
+.+||+|||||++|++||..|++.|++|+|+|+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 468999999999999999999999999999998754
No 191
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.27 E-value=1.8e-06 Score=87.99 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC---CcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAG---HKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G---~~V~vlEa~~~~G 93 (530)
.+||+|||||++|+++|..|++.| .+|+|+|++..++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 489999999999999999999988 9999999986543
No 192
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.27 E-value=5e-06 Score=85.62 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=34.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCcEEEEecCcccC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~V~vlEa~~~~G 93 (530)
..+|++|||||.+|+.+|++|++. |.+|+|||+.....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 468999999999999999999998 89999999986543
No 193
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.23 E-value=1e-06 Score=88.56 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
...+||+|||||++||+||+.|++.|++|+|+|+++.+||...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 4568999999999999999999999999999999999998753
No 194
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.21 E-value=8.8e-07 Score=84.92 Aligned_cols=41 Identities=44% Similarity=0.664 Sum_probs=36.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
..+||+|||||++|+++|+.|++.|++|+|+|+ ..+||.+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 457999999999999999999999999999999 46677543
No 195
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.12 E-value=1.2e-06 Score=88.97 Aligned_cols=43 Identities=28% Similarity=0.424 Sum_probs=39.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
+..+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 3568999999999999999999999999999999988998753
No 196
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.06 E-value=3.1e-06 Score=90.38 Aligned_cols=44 Identities=27% Similarity=0.475 Sum_probs=40.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeee
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~ 98 (530)
...+||+|||||++||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 45689999999999999999999999999999999999998754
No 197
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.06 E-value=1.4e-06 Score=88.75 Aligned_cols=39 Identities=26% Similarity=0.398 Sum_probs=35.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
.+||+|||||++|++||..|++.|++|+|+|++. +||.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcc
Confidence 5899999999999999999999999999999964 78765
No 198
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.05 E-value=3e-06 Score=83.35 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=32.9
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCcEEEEecCccc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~~~ 92 (530)
+||+|||||++||++|+.|++. |++|+|+|++..+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998765
No 199
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.05 E-value=2.8e-06 Score=86.11 Aligned_cols=56 Identities=16% Similarity=0.138 Sum_probs=44.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
..+.+.+.+.++++|++|+++++|++|..+ ++ .+.|++.+ +++.+|.||+|++...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~~-~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTTH-GELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEETT-EEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEECC-cEEEcCEEEECCCCCc
Confidence 356677888888999999999999999863 33 34567764 4899999999998865
No 200
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.04 E-value=2.6e-06 Score=85.26 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++||+|||||++||++|+.|+++|++|+|+|++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999976
No 201
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.01 E-value=3.5e-06 Score=87.99 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++|+++|+.|++.|++|+|+|+....||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 45799999999999999999999999999999999988743
No 202
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.01 E-value=2.9e-05 Score=78.04 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 457999999999999999999999999999998654
No 203
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.97 E-value=3.8e-05 Score=77.94 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46999999999999999999999999999998754
No 204
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.97 E-value=3.1e-06 Score=85.41 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=37.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
..+||+|||||++|++||..|++.|++|+|+|+ +.+||.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 458999999999999999999999999999999 78888764
No 205
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.96 E-value=1.1e-05 Score=77.19 Aligned_cols=39 Identities=33% Similarity=0.283 Sum_probs=35.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCcee
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~ 96 (530)
+||+|||||.+|+.||+.|++.|++|+|+|++...+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999987655443
No 206
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.94 E-value=4.4e-05 Score=77.08 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
.+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 6999999999999999999999999999998654
No 207
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.94 E-value=7.9e-06 Score=86.58 Aligned_cols=44 Identities=32% Similarity=0.515 Sum_probs=40.1
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
.+..+||+|||||++|++||..|++.|++|+|+|+++.+||...
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 34568999999999999999999999999999999999998764
No 208
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.88 E-value=7.1e-06 Score=82.96 Aligned_cols=56 Identities=14% Similarity=0.098 Sum_probs=43.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc-C--Cc--EEecCEEEEccChHH
Q 009635 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPVDI 330 (530)
Q Consensus 273 ~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~-~--G~--~i~ad~VI~a~~~~~ 330 (530)
.+.+.+.+.+++.|++|++++.|++|..++ +. +.|++. + |+ ++.+|.||+|++...
T Consensus 211 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 211 ETAALLRRALEKEGIRVRTKTKAVGYEKKK-DG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET-TE-EEEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CE-EEEEEeecCCCceeEEEcCEEEECCCccc
Confidence 455667788888999999999999998643 32 346655 6 76 899999999998654
No 209
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.86 E-value=7.6e-05 Score=75.90 Aligned_cols=50 Identities=16% Similarity=0.310 Sum_probs=38.1
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 278 l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+.+.+++.|++|++++.|++|.. ++.+..|.+ +|+++.+|.||+|++...
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 44455677999999999999985 344434555 677899999999998643
No 210
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.85 E-value=5.7e-05 Score=76.61 Aligned_cols=50 Identities=18% Similarity=0.153 Sum_probs=38.3
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHH
Q 009635 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (530)
Q Consensus 278 l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (530)
+.+.+++.|++|++++.|++|..+ +.+..|.+.++ ++.+|.||+|++...
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~~-~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN--ERVEAVETDKG-TYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETTE-EEECSEEEECSCEEE
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECCC-EEEcCEEEECcCCCc
Confidence 444556779999999999999863 44555666544 899999999998754
No 211
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.85 E-value=6.9e-05 Score=75.50 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998644
No 212
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.85 E-value=1.7e-05 Score=63.61 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=56.5
Q ss_pred cEEecCEEEEccChHHHhhhCCccccccHHHHHHhccCCccEEEEEEEeccccccccCccccccCCcceeeeccCccccc
Q 009635 315 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKE 394 (530)
Q Consensus 315 ~~i~ad~VI~a~~~~~~~~ll~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 394 (530)
++++||+||+|+|..++..+...+..+....++++++.+....|+++.|+++||+..+. .. +.+...
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~-~g----------d~s~~~-- 70 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEA-DW----------KRELDA-- 70 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHH-HH----------HHHHHH--
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCc-cc----------cccCCC--
Confidence 37999999999999999988655456777889999999999999999999999975321 11 100000
Q ss_pred ccCCCccEEEEE-ee-CccccCCCChhHHHHHHHHHHHHhCCC
Q 009635 395 YYNPNQSMLELV-FA-PAEEWISCSDSEIIDATMKELAKLFPD 435 (530)
Q Consensus 395 ~~~~~~~v~~~~-~~-~~~~~~~~~~e~~~~~~~~~l~~~~p~ 435 (530)
..++ .++.+. .+ ++..|..+++ +-++.++..|.+++|+
T Consensus 71 -~~pg-~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 71 -IAPG-LYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp -HSTT-HHHHHHHHCCCSCCCC---------------------
T ss_pred -CCCe-EEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 0111 122222 12 2457777765 6688899999999996
No 213
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.83 E-value=0.00011 Score=74.40 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 36899999999999999999999999999998654
No 214
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.81 E-value=1.2e-05 Score=88.53 Aligned_cols=41 Identities=34% Similarity=0.602 Sum_probs=38.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~ 97 (530)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 47999999999999999999999999999999999999876
No 215
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.78 E-value=1.6e-05 Score=88.06 Aligned_cols=41 Identities=32% Similarity=0.500 Sum_probs=38.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++||+||+.|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 36799999999999999999999999 799999999999975
No 216
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.78 E-value=6.6e-05 Score=75.64 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 46899999999999999999999999999998644
No 217
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.77 E-value=1.8e-05 Score=79.73 Aligned_cols=39 Identities=31% Similarity=0.357 Sum_probs=34.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCcEEEEecCcccCce
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGK 95 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~~~GG~ 95 (530)
++||+|||||++|++||+.|++. |++|+|+|+++..++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA 43 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC
Confidence 47999999999999999999998 7899999999887654
No 218
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.76 E-value=6.4e-05 Score=76.31 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=40.4
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC----CcEEecCEEEEccChHHHhhh
Q 009635 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVDILKLQ 334 (530)
Q Consensus 278 l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~----G~~i~ad~VI~a~~~~~~~~l 334 (530)
+.+.++++|++|++++.|++|..++++ +.|++.+ |+++.+|.||+|++......+
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~ 290 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKL 290 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEEECGGG
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCCcCCCC
Confidence 344556678999999999999864333 3566666 778999999999987543333
No 219
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.74 E-value=1.9e-05 Score=79.38 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=37.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC--CcEEEEecCcccCcee
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKI 96 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G--~~V~vlEa~~~~GG~~ 96 (530)
..+||+|||||++|+++|..|++.| ++|+|+|+.+.+||..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 4579999999999999999999988 8999999999988865
No 220
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.73 E-value=0.00018 Score=72.76 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+++|||||..|+-+|..|.+.|.+|+|+|+.++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 36899999999999999999999999999998644
No 221
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.73 E-value=1.7e-05 Score=79.68 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=37.5
Q ss_pred CCeEEEECCChHHHHHHHHHHH-C------CCcEEEEecCcccCceee
Q 009635 57 PLKVVIAGAGLAGLSTAKYLAD-A------GHKPLLLEARDVLGGKIA 97 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~-~------G~~V~vlEa~~~~GG~~~ 97 (530)
.+||+|||||++|++||..|++ . |++|+|+|+.+.+||.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 4699999999999999999999 7 999999999988888763
No 222
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.72 E-value=0.00019 Score=72.41 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||..|+-+|..|.+.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 36999999999999999999999999999998643
No 223
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.71 E-value=2.3e-05 Score=80.97 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=43.7
Q ss_pred HHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcC---Cc--EE---ecCEEEEccChHHHhhh
Q 009635 276 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQ 334 (530)
Q Consensus 276 ~~l~~~l~~-~g~~i~~~t~V~~I~~~~~g~~~~v~~~~---G~--~i---~ad~VI~a~~~~~~~~l 334 (530)
.++.+.+.+ .|++|++++.|++|..+ ++++++|++.+ |+ ++ .++.||+|++......|
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 346666665 48999999999999984 56788898865 64 34 78999999998654444
No 224
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.69 E-value=0.00011 Score=71.75 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
.+++|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 5899999999999999999999999999998643
No 225
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.68 E-value=0.0002 Score=72.27 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||+|.+|+-+|..|.+.|.+|+|+|+.++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 45899999999999999999999999999998754
No 226
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.68 E-value=2.8e-05 Score=81.27 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999973
No 227
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.65 E-value=0.0003 Score=71.26 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=38.2
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC---cEEecCEEEEccChHH
Q 009635 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDI 330 (530)
Q Consensus 278 l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G---~~i~ad~VI~a~~~~~ 330 (530)
+.+.+++.|++|++++.|++|..++++ + .|++.++ +++.+|.||+|++...
T Consensus 227 l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 227 AQKILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHTTEEEEETCEEEEEEECSSC-E-EEEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 344556778999999999999874443 3 3555544 5799999999998754
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.63 E-value=0.00032 Score=71.28 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 46899999999999999999999999999998654
No 229
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.59 E-value=0.00019 Score=72.62 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998644
No 230
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.59 E-value=2.2e-05 Score=80.71 Aligned_cols=37 Identities=30% Similarity=0.379 Sum_probs=33.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCccc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~ 92 (530)
..++|+||||||.+|+.+|.+|++ |.+|+|||+....
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 456999999999999999999999 9999999997654
No 231
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.53 E-value=0.00093 Score=67.34 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~~ 91 (530)
...+|+|||||.+|+-+|..|++. |.+|++++++..
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 356999999999999999999998 889999998754
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.44 E-value=0.00079 Score=64.55 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999998753
No 233
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.41 E-value=0.0011 Score=67.18 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
.+++|||||..|+-.|..|++.|.+|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 47999999999999999999999999999864
No 234
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.39 E-value=0.00064 Score=65.98 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|.+|+-+|..|.+.|.+|+++++++
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999998753
No 235
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.33 E-value=0.0018 Score=66.49 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCcEEEe--cceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHH
Q 009635 276 LPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 331 (530)
Q Consensus 276 ~~l~~~l~~~g~~i~~--~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~ 331 (530)
..+.+.+.+.+|++.. +++|.+|. ++| |++.+| ++.+|.||+|||....
T Consensus 342 ~~y~~al~~~nV~lv~~~~~~I~~it--~~g----v~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 342 TNYYETYNRDNVHLVDIREAPIQEVT--PEG----IKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp SSHHHHTTSTTEEEEETTTSCEEEEE--TTE----EEESSC-EEECSEEEECCCCBSS
T ss_pred ccHHHHhcCCCEEEEecCCCCceEEc--cCe----EEeCCC-eeecCEEEECCccccc
Confidence 4577888777899987 89999997 343 789999 9999999999998753
No 236
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.25 E-value=0.0017 Score=65.17 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|.+|+-+|..|++.|.+|+|+|+.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 4589999999999999999999999999999864
No 237
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.24 E-value=0.0022 Score=60.99 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..+|+|||+|.+|+-.|..|++.|.+|+++++.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~ 187 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM 187 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC
Confidence 468999999999999999999999999999875
No 238
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.18 E-value=0.00024 Score=73.68 Aligned_cols=38 Identities=34% Similarity=0.448 Sum_probs=34.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHH-CCCcEEEEecCccc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~-~G~~V~vlEa~~~~ 92 (530)
...+|++|||||.+|+++|++|++ .|.+|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 356899999999999999999999 79999999997543
No 239
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.17 E-value=0.0011 Score=64.42 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 4589999999999999999999999999999864
No 240
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.14 E-value=0.0035 Score=59.22 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4689999999999999999999999999998753
No 241
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.11 E-value=0.004 Score=58.84 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4699999999999999999999999999998753
No 242
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.09 E-value=0.0034 Score=64.09 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
.+++|||||..|+-.|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 36999999999999999999999999999863
No 243
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.02 E-value=0.0044 Score=64.60 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
.+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999864
No 244
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.79 E-value=0.0052 Score=57.48 Aligned_cols=42 Identities=17% Similarity=0.281 Sum_probs=33.4
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChH
Q 009635 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (530)
Q Consensus 282 l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (530)
+.+.|++++. ++|++|.. ++ .|++.+|+++.+|.||+|++..
T Consensus 184 l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 184 LAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp HHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEE
T ss_pred HHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcc
Confidence 3456899985 89999974 22 4788899899999999999764
No 245
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.79 E-value=0.008 Score=56.90 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~ 186 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRR 186 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeC
Confidence 468999999999999999999999999999875
No 246
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.61 E-value=0.002 Score=60.97 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
.+|+|||||..|+-+|..|++.|.+|+|+|++++
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 5899999999999999999999999999998754
No 247
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.45 E-value=0.0043 Score=50.85 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
.+.+|+|||.|-.|...|..|.+.|++|+++|++..
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 456899999999999999999999999999998753
No 248
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.41 E-value=0.0082 Score=63.97 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.6
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIG--aG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 456899999 99999999999999999999999754
No 249
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.25 E-value=0.0057 Score=51.12 Aligned_cols=36 Identities=25% Similarity=0.417 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|..|...|..|.+.|++|++++++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 456899999999999999999999999999998643
No 250
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.21 E-value=0.015 Score=63.96 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..+|+|||+|..|+-+|..|++.|.+|+|+|++
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~ 316 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDAR 316 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 358999999999999999999999999999875
No 251
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.17 E-value=0.0052 Score=50.18 Aligned_cols=34 Identities=32% Similarity=0.600 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 252
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.01 E-value=0.0052 Score=60.07 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 3589999999999999999999999999999987654
No 253
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.92 E-value=0.0082 Score=49.19 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|+|+|..|...|..|.+.|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999864
No 254
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.66 E-value=0.011 Score=46.40 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G-~~V~vlEa~~ 90 (530)
..+|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999999863
No 255
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.58 E-value=0.014 Score=56.91 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=34.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG 94 (530)
..+++|||+|..|+.+|..|.+.|.+|+|+|+.+++..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 46899999999999999999999999999999876543
No 256
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.58 E-value=0.011 Score=55.51 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|+|||||..|...|..++..|++|+|+|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45689999999999999999999999999999764
No 257
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.56 E-value=0.013 Score=57.89 Aligned_cols=38 Identities=32% Similarity=0.402 Sum_probs=34.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
...+|+|||+|..|+-+|..|.+.|.+|+|+|+.+++-
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 179 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL 179 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 45689999999999999999999999999999987654
No 258
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.55 E-value=0.011 Score=59.11 Aligned_cols=36 Identities=25% Similarity=0.503 Sum_probs=33.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCccc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~ 92 (530)
..+|+|||||.+|+.+|..|++.|.+|+|+|+++.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 368999999999999999999999999999998764
No 259
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.42 E-value=0.019 Score=47.74 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..+|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 357999999999999999999999999999986
No 260
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.35 E-value=0.016 Score=54.39 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
+..+|.|||+|..|...|..|++.|++|+++|++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3467999999999999999999999999999976
No 261
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.34 E-value=0.019 Score=56.51 Aligned_cols=39 Identities=28% Similarity=0.372 Sum_probs=34.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG 94 (530)
...+|+|||+|.+|+-+|..|++.|.+|+|+|+.+++..
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 356999999999999999999999999999999876543
No 262
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.34 E-value=0.013 Score=55.17 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+|+|||||..|+-+|..|++.|.+|+|+|+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 3468999999999999999999999999999975
No 263
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.25 E-value=0.019 Score=57.41 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 3589999999999999999999999999999987643
No 264
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.16 E-value=0.027 Score=55.96 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=44.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccCceeeeeecCCCCEEeeeeceecCCcchHHHHHHHcCCCC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (530)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++...... .....+.+.+++.|++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~-----------------~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDA-----------------DMNQPILDELDKREIPY 205 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCG-----------------GGGHHHHHHHHHTTCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccc-----------------hhHHHHHHHhhccceEE
Confidence 458999999999999999999999999999998775432111 11234667777777763
No 265
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.12 E-value=0.023 Score=46.46 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999763
No 266
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.06 E-value=0.022 Score=49.02 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-CCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~-G~~V~vlEa~~ 90 (530)
..+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45899999999999999999999 99999999864
No 267
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.97 E-value=0.025 Score=56.70 Aligned_cols=37 Identities=32% Similarity=0.456 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 3589999999999999999999999999999986643
No 268
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.94 E-value=0.022 Score=56.85 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35689999999999999999999999999999864
No 269
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.82 E-value=0.022 Score=50.61 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 270
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.81 E-value=0.022 Score=56.59 Aligned_cols=37 Identities=32% Similarity=0.518 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
.++|+|||.|.+|+++|..|+++|++|++.|.+...-
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 3579999999999999999999999999999876543
No 271
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.78 E-value=0.034 Score=55.16 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||+|..|+-+|..|.+.|.+|+|+|+.+++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 4689999999999999999999999999999987653
No 272
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.77 E-value=0.034 Score=54.97 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
+..+|.|||+|..|...|..|++.|++|+++|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999998754
No 273
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.67 E-value=0.025 Score=55.64 Aligned_cols=37 Identities=27% Similarity=0.282 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||+|.+|+-+|..|.+.|.+|+++|+.+++.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 4689999999999999999999999999999987654
No 274
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.66 E-value=0.036 Score=52.65 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=32.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
+..++|+|||||..|.+.|..|++.|+ +|+++|.+.
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 345799999999999999999999998 999999864
No 275
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.65 E-value=0.029 Score=53.66 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=33.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
-.+.+|||+|||.+|+.+|..|...|. +|+|+|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 366799999999999999999999998 899999974
No 276
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.53 E-value=0.032 Score=53.57 Aligned_cols=34 Identities=32% Similarity=0.278 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..++|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4578999999999999999999999999999875
No 277
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.50 E-value=0.029 Score=57.39 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457999999999999999999999999999999765
No 278
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.46 E-value=0.04 Score=55.52 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 4689999999999999999999999999999987643
No 279
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.41 E-value=0.036 Score=52.23 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|.|||+|..|.+.|..|++.|++|+++|.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 280
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.40 E-value=0.038 Score=51.29 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3589999999999999999999999999999864
No 281
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.37 E-value=0.037 Score=55.31 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+++|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 4689999999999999999999999999999987654
No 282
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.37 E-value=0.037 Score=56.12 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 4699999999999999999999999999999987654
No 283
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.37 E-value=0.041 Score=55.18 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCccc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~ 92 (530)
...+|+|||+|.+|+-+|..|++.|.+|+|+++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 3568999999999999999999999999999987653
No 284
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.36 E-value=0.039 Score=48.80 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
....|+|||||-.|...|..|.+.|.+|+|++.+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5679999999999999999999999999999864
No 285
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.34 E-value=0.027 Score=51.57 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
....|+|||+|-.|+..|..|.+.|.+|+|++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999998753
No 286
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.30 E-value=0.039 Score=52.72 Aligned_cols=34 Identities=32% Similarity=0.601 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
++.+|+|+|||.+|..+|..|...|. +|+|+|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 66799999999999999999999998 79999987
No 287
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.30 E-value=0.046 Score=52.85 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35699999999999999999999999999999863
No 288
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.28 E-value=0.038 Score=55.35 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 56799999999999999999999999999999863
No 289
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.25 E-value=0.05 Score=48.82 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=31.1
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+.|+|.|| |..|...|..|+++|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4568999998 9999999999999999999998763
No 290
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.21 E-value=0.044 Score=51.90 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 291
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.18 E-value=0.054 Score=51.01 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=32.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...++|.|||.|..|...|..|++.|++|++++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 355799999999999999999999999999999864
No 292
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.18 E-value=0.034 Score=57.00 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 456999999999999999999999999999999764
No 293
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.15 E-value=0.044 Score=54.76 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+++-
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh
Confidence 4589999999999999999999999999999987643
No 294
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.05 E-value=0.056 Score=47.55 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..++|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999998754
No 295
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.05 E-value=0.057 Score=53.22 Aligned_cols=37 Identities=32% Similarity=0.376 Sum_probs=34.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||+|..|+-+|..|.+.|.+|+++|+.+++-
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 5689999999999999999999999999999987754
No 296
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.99 E-value=0.055 Score=51.34 Aligned_cols=35 Identities=20% Similarity=0.124 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHH-HHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~-aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||.|.+|++ +|..|.++|++|++.|++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4568999999999997 7888999999999999864
No 297
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.95 E-value=0.045 Score=51.62 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999998864
No 298
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.92 E-value=0.047 Score=51.87 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|.+.|.+|+++++++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 356899999999999999999999999999998754
No 299
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.92 E-value=0.056 Score=51.15 Aligned_cols=35 Identities=31% Similarity=0.404 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~ 90 (530)
..++|+|||+|..|.+.|+.|++.|+ +|++++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 999999863
No 300
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.92 E-value=0.056 Score=50.27 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999998864
No 301
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.89 E-value=0.052 Score=52.06 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45699999999999999999999999999999863
No 302
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.84 E-value=0.059 Score=55.58 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 187 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM 187 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc
Confidence 4589999999999999999999999999999987543
No 303
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.77 E-value=0.054 Score=51.56 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-.|..|++.|.+|+++++++.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 356899999999999999999999999999987643
No 304
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.76 E-value=0.055 Score=54.69 Aligned_cols=35 Identities=29% Similarity=0.492 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||||.+|+-.|..|++.|.+|+|+|+.++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 45899999999999999999999999999998754
No 305
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.73 E-value=0.056 Score=51.19 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++++.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999998643
No 306
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.72 E-value=0.055 Score=51.04 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCccc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~ 92 (530)
...+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 3468999999999999999999999999999987543
No 307
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.72 E-value=0.058 Score=53.75 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CC-cEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA-GH-KPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~-G~-~V~vlEa~~~ 91 (530)
+.++|.|||+|..|+..|..|++. |+ +|+++|.+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 456899999999999999999999 99 9999998754
No 308
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.71 E-value=0.062 Score=52.76 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=33.1
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 54 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+.++.|||.|..||..|..|++.|++|+.+|-+.
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3456799999999999999999999999999999764
No 309
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.71 E-value=0.069 Score=53.54 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||+|.+|+-+|..|++.|.+|+|+|+.++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999998754
No 310
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.71 E-value=0.058 Score=50.05 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||+|..|...|..|+ +|++|+++|++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4579999999999999999999 999999999764
No 311
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.70 E-value=0.064 Score=53.99 Aligned_cols=37 Identities=32% Similarity=0.410 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||||.+|+-+|..|++.|.+|+|+++.+++-
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 3589999999999999999999999999999976643
No 312
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.70 E-value=0.053 Score=53.84 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999874
No 313
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.67 E-value=0.072 Score=50.47 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
..+|+|||||..|.+.|+.|++.|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999863
No 314
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.66 E-value=0.069 Score=52.80 Aligned_cols=36 Identities=19% Similarity=0.488 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+++|||.|..|+..|..|++.|++|++++.+..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457999999999999999999999999999998753
No 315
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.60 E-value=0.063 Score=54.70 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCccc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~ 92 (530)
.+++|||||+.|+-.|..+++.|.+|+|+++...+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L 258 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL 258 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc
Confidence 57999999999999999999999999999876544
No 316
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.58 E-value=0.07 Score=50.85 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
.++|+|||+|..|.+.|..|++.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999874
No 317
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.57 E-value=0.058 Score=53.76 Aligned_cols=36 Identities=8% Similarity=-0.020 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCc-EEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~-V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|++.|.+ |+|+++++.
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 356899999999999999999999998 999998754
No 318
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.54 E-value=0.061 Score=50.65 Aligned_cols=32 Identities=31% Similarity=0.501 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 58999999999999999999999999999875
No 319
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.44 E-value=0.067 Score=50.57 Aligned_cols=33 Identities=45% Similarity=0.656 Sum_probs=29.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..++|+|||+|..|.+.|..|++.|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 5568999999999999999999999999999 65
No 320
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.37 E-value=0.081 Score=52.83 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4589999999999999999999999999999764
No 321
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.36 E-value=0.06 Score=50.26 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999863
No 322
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.35 E-value=0.075 Score=53.72 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHC---CCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~---G~~V~vlEa~~~~G 93 (530)
..+++|||||..|+-+|..|++. |.+|+|+|+.+++-
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 230 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL 230 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc
Confidence 35999999999999999999999 99999999987643
No 323
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.21 E-value=0.098 Score=52.15 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=35.5
Q ss_pred CCCCCceEEecccccCCCCCcHHHHHHHHHHHHHHHHHhhhhHhhh
Q 009635 473 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 518 (530)
Q Consensus 473 ~~~~~~l~~aG~~~~~~~~~~i~gA~~sg~~aA~~vl~~~~~~~~~ 518 (530)
++..++||.+||.+... ..+..|+..|+.||..|...|......
T Consensus 406 ~Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~~~~~ 449 (456)
T 2vdc_G 406 MTNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKAKAEA 449 (456)
T ss_dssp BCSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 34577999999987653 579999999999999999998764433
No 324
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.20 E-value=0.082 Score=53.38 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHC---CCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~---G~~V~vlEa~~~~G 93 (530)
..+++|||||..|+-+|..|.+. |.+|+|+|+.+++.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 45999999999999999999999 99999999987644
No 325
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.19 E-value=0.074 Score=50.47 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 356899999999999999999999999999998654
No 326
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.19 E-value=0.09 Score=47.54 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 56799999999999999999999999999999764
No 327
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.10 E-value=0.085 Score=49.45 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45689999999999999999999999999998763
No 328
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.04 E-value=0.087 Score=49.75 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
..+|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999998 999999863
No 329
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.04 E-value=0.099 Score=48.54 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999998864
No 330
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.00 E-value=0.095 Score=49.08 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--cEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 899999763
No 331
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.00 E-value=0.09 Score=53.58 Aligned_cols=36 Identities=17% Similarity=0.363 Sum_probs=33.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
.+++|||+|..|+-+|..|.+.|.+|+|+|+.+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 689999999999999999999999999999987654
No 332
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.00 E-value=0.097 Score=49.87 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
.+++|.|||+|..|.+.|..|++.|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4579999999999999999999999999999875
No 333
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.00 E-value=0.11 Score=49.07 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
..+|+|||||..|...|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4589999999999999999999998 899999753
No 334
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.94 E-value=0.073 Score=52.79 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|+..|..|++.|++|++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999763
No 335
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.88 E-value=0.1 Score=54.03 Aligned_cols=37 Identities=22% Similarity=0.418 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 4589999999999999999999999999999987644
No 336
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.88 E-value=0.086 Score=51.70 Aligned_cols=34 Identities=29% Similarity=0.539 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||+|..|+..|..|++ |++|++++.+.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 45699999999999999999998 99999999864
No 337
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.86 E-value=0.095 Score=51.34 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||.|-.|...|..|.+.|++|+++|.+..
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345899999999999999999999999999998753
No 338
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.86 E-value=0.12 Score=45.68 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44689999999999999999999999999998763
No 339
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.82 E-value=0.043 Score=54.75 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..++|+|+|+|-.|...|..|.+.|++|+|+|++..
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 457899999999999999999999999999998743
No 340
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.75 E-value=0.1 Score=52.29 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 341
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.74 E-value=0.11 Score=49.21 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
+..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 356799999999999999999999999999998763
No 342
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.69 E-value=0.11 Score=52.67 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+++|||+|..|+-.|..|.+.|.+|+|+|+.+++.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 3689999999999999999999999999999987654
No 343
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.69 E-value=0.099 Score=49.08 Aligned_cols=33 Identities=36% Similarity=0.508 Sum_probs=30.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++|+|||+|..|.+.|..|+ .|++|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999998763
No 344
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.65 E-value=0.12 Score=50.45 Aligned_cols=34 Identities=32% Similarity=0.496 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5689999999999999999999999999998763
No 345
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.63 E-value=0.11 Score=49.88 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
++|+|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999999999999999999999875
No 346
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.62 E-value=0.084 Score=53.73 Aligned_cols=36 Identities=31% Similarity=0.306 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 346999999999999999999999999999987644
No 347
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.50 E-value=0.054 Score=44.39 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999999999998763
No 348
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.43 E-value=0.14 Score=47.03 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
....++|+|+|-.|.++|+.|++.|.+|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999876
No 349
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.32 E-value=0.14 Score=48.17 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999985 78999999863
No 350
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.29 E-value=0.094 Score=49.90 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=29.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa 88 (530)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999987
No 351
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.27 E-value=0.1 Score=48.71 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
.++|.|||.|..|...|..|++.|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998643
No 352
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.21 E-value=0.13 Score=51.67 Aligned_cols=37 Identities=38% Similarity=0.477 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-CCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~-G~~V~vlEa~~~~G 93 (530)
..+|+|||+|.+|+-+|..|.+. |.+|+++|+.+++.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l 196 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM 196 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc
Confidence 46899999999999999999999 99999999986543
No 353
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.21 E-value=0.16 Score=46.26 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..+++|||+|-+|-++|+.|++.|.+|+|+.++
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999999999999999999999999775
No 354
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.21 E-value=0.14 Score=47.94 Aligned_cols=35 Identities=34% Similarity=0.448 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||+|.+|+-+|..|.+.|.+|+++++++.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 46899999999999999999999999999998754
No 355
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.19 E-value=0.13 Score=48.15 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998763
No 356
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.18 E-value=0.15 Score=44.81 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=29.4
Q ss_pred CeEEEEC-CChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIG-aG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
++|+||| +|..|...|..|++.|++|++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999 9999999999999999999999875
No 357
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.14 E-value=0.11 Score=48.18 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 358
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.11 E-value=0.16 Score=47.71 Aligned_cols=33 Identities=33% Similarity=0.436 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
..+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 359
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.08 E-value=0.17 Score=47.62 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
..+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4589999999999999999999988 999999764
No 360
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.08 E-value=0.094 Score=51.30 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999864
No 361
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.07 E-value=0.13 Score=46.62 Aligned_cols=34 Identities=35% Similarity=0.511 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
..+|+|||+|-.|..+|..|++.|. +|+|+|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 799999864
No 362
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.04 E-value=0.16 Score=49.30 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45699999999999999999999999999999763
No 363
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.04 E-value=0.17 Score=50.91 Aligned_cols=33 Identities=33% Similarity=0.598 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
..+++|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 358999999999999999999999999999975
No 364
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.03 E-value=0.16 Score=47.55 Aligned_cols=32 Identities=38% Similarity=0.525 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
.+|+|||||..|...|+.|+..|+ +|+++|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 589999999999999999999996 89999975
No 365
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.99 E-value=0.17 Score=48.69 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.+|+|+|+|.+|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999763
No 366
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.95 E-value=0.15 Score=50.89 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHH--------------------HCCC-cEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLA--------------------DAGH-KPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~--------------------~~G~-~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|+ +.|. +|+|++++..
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 3568999999999999999999 5677 6999998754
No 367
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.95 E-value=0.17 Score=48.83 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
+++|+|||||..|..+|+.+.+.|++|+++|.+..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 35899999999999999999999999999997654
No 368
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.78 E-value=0.17 Score=50.59 Aligned_cols=36 Identities=25% Similarity=0.395 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCccc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~ 92 (530)
..+++|||+|.+|+-.|..|.+.|.+|+++|+.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 468999999999999999999999999999998754
No 369
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.75 E-value=0.17 Score=50.90 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
..+++|||+|.+|+-.|..|.+.|.+|+++|+.+++.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 227 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL 227 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc
Confidence 4699999999999999999999999999999987643
No 370
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.73 E-value=0.063 Score=47.70 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=32.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
+..++|.|||+|..|.+.|..|.+.|++|+++++.
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 45679999999999999999999999999999875
No 371
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.71 E-value=0.18 Score=48.39 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34799999999999999999999999999998763
No 372
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.70 E-value=0.14 Score=47.02 Aligned_cols=34 Identities=26% Similarity=0.189 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
....++|+|+|-+|.++|+.|++.|.+|+|+.++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4468999999999999999999999999999876
No 373
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.69 E-value=0.17 Score=53.51 Aligned_cols=34 Identities=32% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999764
No 374
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.69 E-value=0.22 Score=46.80 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
...+|+|||+|..|.++|+.|+..|. +|+++|.+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 45799999999999999999999987 89999975
No 375
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.61 E-value=0.21 Score=46.77 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999998763
No 376
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.58 E-value=0.17 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G-~~V~vlEa~~ 90 (530)
.++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999874
No 377
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.58 E-value=0.23 Score=46.70 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999998764
No 378
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=91.56 E-value=0.17 Score=48.60 Aligned_cols=40 Identities=28% Similarity=0.432 Sum_probs=34.9
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCC---cEEEEecCc-ccCce
Q 009635 56 KPLKVVIAGA-GLAGLSTAKYLADAGH---KPLLLEARD-VLGGK 95 (530)
Q Consensus 56 ~~~dVvIIGa-G~aGl~aA~~L~~~G~---~V~vlEa~~-~~GG~ 95 (530)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4679999999 9999999999999997 999999876 44654
No 379
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.53 E-value=0.18 Score=47.44 Aligned_cols=34 Identities=32% Similarity=0.359 Sum_probs=30.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
...+|+|||+|..|.+.|+.|+..|. +|+++|.+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34699999999999999999999987 89999975
No 380
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.52 E-value=0.11 Score=48.92 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=29.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-----C-CcEEEEec
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA-----G-HKPLLLEA 88 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~-----G-~~V~vlEa 88 (530)
.++|.|||+|..|.+.|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999999 9 99999986
No 381
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.50 E-value=0.15 Score=48.06 Aligned_cols=32 Identities=34% Similarity=0.435 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
++|+|||+|..|.+.|..|++.|+ +|+++|.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 379999999999999999999998 89999976
No 382
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.48 E-value=0.15 Score=47.92 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=30.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
+..++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 346799999999999999999999999 99999985
No 383
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.47 E-value=0.19 Score=46.76 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
...+|+|||+|-+|.++|+.|++.|. +|+|+.++
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35689999999999999999999998 89999876
No 384
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.43 E-value=0.11 Score=46.02 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEE-EecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~v-lEa~ 89 (530)
.++|.|||+|..|.+.|..|++.|++|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 46899999999999999999999999988 7665
No 385
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.34 E-value=0.17 Score=47.15 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~ 90 (530)
...+|+|||||..|...|+.|+..|. +|+|+|.+.
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 34689999999999999999999988 899999864
No 386
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.32 E-value=0.15 Score=47.25 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--cEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|+.|++.|. +|+++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999987 899999763
No 387
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.27 E-value=0.22 Score=48.02 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999763
No 388
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.17 E-value=0.19 Score=50.04 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
....|+|||+|-+|...|..|.+.|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3568999999999999999999999999999974
No 389
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.13 E-value=0.25 Score=46.50 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
..+|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999887 899999764
No 390
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.12 E-value=0.16 Score=47.88 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 46899999999999999999999999999998644
No 391
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.04 E-value=0.18 Score=50.58 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~ 90 (530)
.++|.|||+|..|+..|..|++. |++|++++.+.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 78999999753
No 392
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.03 E-value=0.22 Score=46.92 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
...+|+|||+|..|.+.|+.|+..|. +|+++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 35689999999999999999999887 89999975
No 393
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.96 E-value=0.26 Score=51.90 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
+-.+|.|||||..|...|+.++..|++|+|+|.+.
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 34699999999999999999999999999999764
No 394
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.91 E-value=0.16 Score=49.04 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=29.5
Q ss_pred eEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 59 dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
+|.|||+|..|.+.|..|++.|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 395
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.88 E-value=0.19 Score=47.22 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCC--CcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G--~~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999998 6899999863
No 396
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.84 E-value=0.27 Score=43.19 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=29.2
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
++|+|+|| |..|...+..|+++|++|+++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 46999996 999999999999999999999875
No 397
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.84 E-value=0.24 Score=45.68 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
++|.|||+|..|.+.|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999875
No 398
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.81 E-value=0.31 Score=45.06 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=31.1
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999 9999999999999999999998763
No 399
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.75 E-value=0.27 Score=45.86 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=31.0
Q ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIG-aG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 45899999 99999999999999999999998764
No 400
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.71 E-value=0.31 Score=45.97 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=31.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
....+|+|||+|..|.++|+.|+..|. +|+++|..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 356799999999999999999999987 79999975
No 401
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.70 E-value=0.21 Score=45.55 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=29.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-CcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAG-HKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G-~~V~vlEa~ 89 (530)
++|.|||+|..|.+.|..|++.| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999875
No 402
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.64 E-value=0.3 Score=45.08 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++|+|.|+|..|...+..|.++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999999999999998753
No 403
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.63 E-value=0.29 Score=46.01 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~ 90 (530)
...+|.|||.|..|.+.|..|++.|+ +|++++++.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 899998753
No 404
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.63 E-value=0.23 Score=46.31 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.5
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG-~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+|+|||+| +.|..+|..|...|.+|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 56799999999 67999999999999999998765
No 405
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.56 E-value=0.21 Score=52.78 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 34579999999999999999999999999999864
No 406
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.54 E-value=0.23 Score=46.57 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=29.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--cEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~ 90 (530)
++|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999886 899999764
No 407
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.53 E-value=0.21 Score=49.94 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~--G~~V~vlEa~~ 90 (530)
.++|.|||.|..|+..|..|++. |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999998 89999999763
No 408
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.52 E-value=0.29 Score=47.34 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
....|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35689999999999999999999999999999763
No 409
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.50 E-value=0.26 Score=49.20 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 410
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.47 E-value=0.24 Score=45.50 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
...+++|||+|-+|.++|+.|++.|. +|+|+.++.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998764
No 411
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.45 E-value=0.24 Score=45.75 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
+++|+|+|||..|...+..|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998754
No 412
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.43 E-value=0.3 Score=43.08 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=29.4
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
++|+|+|| |..|...+..|+++|++|+++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999998 999999999999999999999775
No 413
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.36 E-value=0.25 Score=45.94 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.6
Q ss_pred eEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 59 dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998753
No 414
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.32 E-value=0.22 Score=47.53 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=29.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+|+|||+|.+|+-+|..|++.| +|++++++
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3468999999999999999999998 69999876
No 415
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.31 E-value=0.21 Score=49.06 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+..|||.|..|+..|..|++.|++|+++|.+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3478999999999999999999999999999875
No 416
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=90.26 E-value=0.3 Score=44.91 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
...+++|||+|-+|-++|+.|.+.|. +|+|+.++.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 56799999999999999999999998 899998763
No 417
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.25 E-value=0.33 Score=43.94 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
.. +++|||+|-+|-++++.|.+.|. +|+|+.++.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 44 89999999999999999999998 899998864
No 418
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.23 E-value=0.29 Score=46.40 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|.|||.|..|-+.|..|.+.|++|++++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44579999999999999999999999999998763
No 419
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.21 E-value=0.33 Score=45.39 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
....++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45789999999999999999999998 79999876
No 420
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=90.19 E-value=0.24 Score=49.94 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHH----CCCcEEEEecCccc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLAD----AGHKPLLLEARDVL 92 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~----~G~~V~vlEa~~~~ 92 (530)
..+|+|||||..|+-+|..|++ .|.+|+++++.+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 4689999999999999999987 47899999987543
No 421
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=90.14 E-value=0.29 Score=47.92 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=29.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC---cEEEEe
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLE 87 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~---~V~vlE 87 (530)
...+|+|+|||-+|.++|+.|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45689999999999999999999997 799999
No 422
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.13 E-value=0.26 Score=45.95 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998753
No 423
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.05 E-value=0.25 Score=45.42 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+|+|||+|-.|.+.|+.|.+.|.+|++++++
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999876
No 424
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.04 E-value=0.34 Score=44.30 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
....++|+|+|-+|.++|+.|++.|. +|+|+.++
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56789999999999999999999996 89999775
No 425
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.01 E-value=0.28 Score=45.75 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
.++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999875
No 426
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.00 E-value=0.25 Score=49.41 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.+.+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34589999999999999999999999999999863
No 427
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.00 E-value=0.14 Score=45.85 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=30.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+|||+|-.|...|..|.+.|+ |+++|++..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 45689999999999999999999999 999998743
No 428
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.97 E-value=0.35 Score=44.54 Aligned_cols=34 Identities=32% Similarity=0.248 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
....++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 69999776
No 429
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.90 E-value=0.26 Score=54.58 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
.+|+|||||.+|+-+|..|.+.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999996 899999875
No 430
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.86 E-value=0.32 Score=48.89 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34589999999999999999999999999999864
No 431
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.78 E-value=0.2 Score=48.46 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-------CcEEEEecCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G-------~~V~vlEa~~~ 91 (530)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999987643
No 432
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=89.72 E-value=0.37 Score=44.30 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
....++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46789999999999999999999996 89999875
No 433
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.71 E-value=0.38 Score=44.89 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
....|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999763
No 434
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.69 E-value=0.32 Score=45.91 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=30.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC----CcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G----~~V~vlEa~ 89 (530)
..++|.|||+|..|.+.|..|.+.| ++|++++++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 3458999999999999999999999 799999875
No 435
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.65 E-value=0.37 Score=45.40 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
...+|+|||+|-.|..+|..|+..|. +++|+|...
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 46799999999999999999999997 699998754
No 436
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.64 E-value=0.36 Score=44.46 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=29.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
.+|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89998875
No 437
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=89.58 E-value=0.32 Score=48.42 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--------------------CC-cEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADA--------------------GH-KPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~--------------------G~-~V~vlEa~~~ 91 (530)
...+|+|||+|.+|+-+|..|++. |. +|+|++++..
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 356899999999999999999974 54 8999998754
No 438
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.55 E-value=0.26 Score=45.43 Aligned_cols=35 Identities=34% Similarity=0.489 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45799999999999999999999997 799999753
No 439
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.53 E-value=0.34 Score=43.80 Aligned_cols=35 Identities=37% Similarity=0.463 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 35699999999999999999999997 689998753
No 440
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.51 E-value=0.41 Score=44.47 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
....|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999764
No 441
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.46 E-value=0.35 Score=45.50 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
...+|+|||+|..|.++|+.|+..|. +|+++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 45689999999999999999999887 79999975
No 442
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=89.43 E-value=0.42 Score=48.90 Aligned_cols=37 Identities=41% Similarity=0.627 Sum_probs=33.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+|+||||||.+|+.+|++|++.|.+|+|||+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3678999999999999999999999999999999864
No 443
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=89.42 E-value=0.33 Score=47.15 Aligned_cols=36 Identities=19% Similarity=0.433 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC---cEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~---~V~vlEa~~~ 91 (530)
.+.+|||.|||.+|+.+|..|.+.|. +|.++|+...
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred hhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 55799999999999999999999997 7999998743
No 444
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.42 E-value=0.33 Score=48.71 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999863
No 445
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.41 E-value=0.28 Score=45.40 Aligned_cols=33 Identities=30% Similarity=0.290 Sum_probs=29.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
....++|+|+|-.|.++|+.|++.| +|+|+.++
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 3468999999999999999999999 99999875
No 446
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.40 E-value=0.31 Score=44.32 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
+++|.|||+|..|...|..|.+.|++|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 468999999999999999999999999999875
No 447
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.36 E-value=0.19 Score=48.21 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-------CcEEEEecCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G-------~~V~vlEa~~~ 91 (530)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999998 89999987644
No 448
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.36 E-value=0.36 Score=43.54 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC----cEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH----KPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~----~V~vlEa~~ 90 (530)
++|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999863
No 449
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.33 E-value=0.3 Score=45.20 Aligned_cols=31 Identities=29% Similarity=0.318 Sum_probs=28.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
++|.|||+|..|...|..|++ |++|++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 479999999999999999999 9999999875
No 450
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.27 E-value=0.41 Score=45.40 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=29.9
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 56 KPLKVVIAGA-GLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGa-G~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
...+|+|||+ |..|.++|+.|+..|. +|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 3568999998 9999999999999985 79999974
No 451
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=89.26 E-value=0.45 Score=44.45 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
....++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 56789999999999999999999998 79999876
No 452
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.24 E-value=0.31 Score=44.37 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCC----CcEEEEecCcc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARDV 91 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G----~~V~vlEa~~~ 91 (530)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 58999999999999999999999 69999987643
No 453
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.23 E-value=0.44 Score=41.20 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.4
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
+.|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999998764
No 454
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.17 E-value=0.3 Score=49.91 Aligned_cols=35 Identities=14% Similarity=0.319 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|+|||+|.+|+-.|..|++.|.+|+|+++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 45799999999999999999999999999999864
No 455
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.12 E-value=0.33 Score=48.59 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999863
No 456
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.98 E-value=0.19 Score=49.15 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=28.0
Q ss_pred CeEEEECCChHHHHHHHHHHH-CCCcEEEEe
Q 009635 58 LKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~-~G~~V~vlE 87 (530)
++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 499999998
No 457
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.98 E-value=0.39 Score=47.54 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
....|+|+|+|-.|.++|..|+..|.+|++.|.+.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45689999999999999999999999999998764
No 458
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=88.88 E-value=0.27 Score=49.70 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHC--------------CCcEEEEecCcccCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADA--------------GHKPLLLEARDVLGG 94 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~V~vlEa~~~~GG 94 (530)
..++|||||++|+-.|..|++. ..+|+|+|+.+++-.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~ 268 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN 268 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc
Confidence 4799999999999999988753 358999999887543
No 459
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=88.87 E-value=0.42 Score=50.44 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=33.9
Q ss_pred CCCCeEEEEC--CChHHHHHHHHHHHCCCcEEEEecCcccC
Q 009635 55 SKPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (530)
Q Consensus 55 ~~~~dVvIIG--aG~aGl~aA~~L~~~G~~V~vlEa~~~~G 93 (530)
+...+|+||| +|.+|+-+|..|++.|.+|+++++.+.+.
T Consensus 521 ~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 521 PDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp CSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 3456899999 99999999999999999999999876543
No 460
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.84 E-value=0.26 Score=45.81 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 53
No 461
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=88.81 E-value=2.8 Score=40.31 Aligned_cols=51 Identities=20% Similarity=0.178 Sum_probs=39.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccChHHHhhhC
Q 009635 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 335 (530)
Q Consensus 272 ~~l~~~l~~~l~~~g~~i~~~t~V~~I~~~~~g~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ll 335 (530)
..|.+.|.+.+.+.|++|+++++|++|+.. ++++||.||.|.|.++.++.+
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~R~~l 148 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHKTAHF 148 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGGTCCS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCchHHhh
Confidence 467778888888889999999999998531 136899999999987653333
No 462
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.75 E-value=0.43 Score=45.42 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=30.5
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 55 ~~~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
...+.|+|.|| |..|...+..|+++|++|+++.++..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 35568999998 99999999999999999999987643
No 463
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.75 E-value=0.44 Score=44.80 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=29.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
...+|+|||+|..|.+.|+.|+..|. +|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34699999999999999999988775 79999975
No 464
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.74 E-value=0.35 Score=44.06 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=28.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEec
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa 88 (530)
++|.|||+|..|...|..|++.|++|+++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 3689999999999999999999999998765
No 465
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.73 E-value=0.5 Score=43.50 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC---cEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~---~V~vlEa~~ 90 (530)
.++|.|||+|-.|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999998 899998753
No 466
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.60 E-value=0.4 Score=45.02 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.5
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCC--CcEEEEecCc
Q 009635 58 LKVVIAGA-GLAGLSTAKYLADAG--HKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGa-G~aGl~aA~~L~~~G--~~V~vlEa~~ 90 (530)
++|+|||| |..|.+.|+.|++.| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999888 5899999865
No 467
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.57 E-value=0.34 Score=44.26 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCc-EEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~-V~vlEa~~ 90 (530)
.++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999999 89998763
No 468
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.54 E-value=0.33 Score=45.16 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=28.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.+|.+||-|..|...|..|++.|++|++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998764
No 469
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=88.51 E-value=0.46 Score=43.46 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=30.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
..+++|||+|-+|-++|+.|++.|. +|+|+.++
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997 79999775
No 470
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=88.48 E-value=0.55 Score=43.58 Aligned_cols=33 Identities=24% Similarity=0.579 Sum_probs=29.9
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|+|.|| |..|-..+..|.++|++|+++-++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999998 9999999999999999999996643
No 471
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.47 E-value=0.46 Score=43.31 Aligned_cols=31 Identities=29% Similarity=0.349 Sum_probs=29.4
Q ss_pred eEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 59 dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
+++|||+|-.|.+.|..|.+.|.+|++++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 8999999999999999999999999999876
No 472
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=88.38 E-value=0.38 Score=44.49 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=28.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--cEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~~ 90 (530)
++|+|||+|-.|.++|+.|..++. +++|+|-..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 579999999999999999988765 699999753
No 473
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.32 E-value=0.46 Score=44.82 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=30.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 55 ~~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
.+..+|+|||||-.|.+.|+.|+..+. .|+++|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 355799999999999999999998775 78899864
No 474
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.21 E-value=0.44 Score=44.76 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
..+|+|||+|-.|.+.|+.|+..|. .|+++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999998875 79999865
No 475
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.09 E-value=0.36 Score=48.61 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHH-HHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~-aA~~L~~~G~~V~vlEa~~ 90 (530)
...+|.|||.|-+|++ +|..|.+.|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 4568999999999997 6999999999999999763
No 476
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.07 E-value=0.45 Score=42.01 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.8
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 468999995 9999999999999999999998864
No 477
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=88.06 E-value=0.59 Score=43.19 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=30.7
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIG-aG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
....++|+| +|-.|.++|..|++.|.+|+++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 346899999 9999999999999999999999875
No 478
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=87.90 E-value=0.54 Score=43.20 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=30.6
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG-~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+|+|||+| +.|..+|..|.+.|..|+++.++
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 56799999999 68999999999999999999644
No 479
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.86 E-value=0.57 Score=44.75 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
....|+|+|+|-.|..+|..|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999999999999999999999999998854
No 480
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.85 E-value=0.55 Score=44.58 Aligned_cols=34 Identities=29% Similarity=0.236 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 57 ~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.++|.|||+|..|.+.|..|++.|++|++.+++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999998764
No 481
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.74 E-value=0.62 Score=43.96 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=31.1
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..+.|+|.|| |..|...+..|+++|++|+++.++.
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4468999998 9999999999999999999998753
No 482
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.55 E-value=0.47 Score=44.58 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=29.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~--~V~vlEa~ 89 (530)
+..+|+|||||..|.+.|+.|+..+. +|+++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 44799999999999999999998876 79999874
No 483
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=87.54 E-value=0.62 Score=42.79 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=30.2
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+++|||+ |+.|..+|..|.+.|..|+++.++
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5679999995 569999999999999999999863
No 484
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=87.38 E-value=0.52 Score=44.97 Aligned_cols=34 Identities=35% Similarity=0.459 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
...+|+|||+|-.|..+|..|++.|. +++|+|..
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 35699999999999999999999997 69999975
No 485
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.28 E-value=0.67 Score=43.33 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=31.8
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecCcc
Q 009635 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~~~ 91 (530)
..+.|+|.|| |..|...+..|.+.|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999987643
No 486
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=87.21 E-value=0.64 Score=42.12 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=30.4
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG-~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+++|||+| +.|..+|..|.+.|..|++..++
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 56799999976 79999999999999999999753
No 487
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.20 E-value=0.38 Score=45.47 Aligned_cols=41 Identities=22% Similarity=0.396 Sum_probs=30.8
Q ss_pred CCCCCceEEecccccC---CC-C-CcHHHHHHHHHHHHHHHHHhhh
Q 009635 473 RSPVEGFYLAGDYTKQ---KY-L-ASMEGAVLSGKLCAQAIVQDYV 513 (530)
Q Consensus 473 ~~~~~~l~~aG~~~~~---~~-~-~~i~gA~~sg~~aA~~vl~~~~ 513 (530)
.+.+++||.|||.+.. .+ . ..+-+++.||++||+.|++.|.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 4568899999998641 11 1 2455678999999999999885
No 488
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.19 E-value=0.44 Score=44.98 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=29.9
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHCC--CcEEEEecCc
Q 009635 56 KPLKVVIAG-AGLAGLSTAKYLADAG--HKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIG-aG~aGl~aA~~L~~~G--~~V~vlEa~~ 90 (530)
..++|+||| +|..|.+.|+.|++.| .+|+++|...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 346899999 7999999999999988 6899998654
No 489
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.15 E-value=0.54 Score=46.99 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 589999999999999999999999999999863
No 490
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=87.09 E-value=0.97 Score=42.67 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.3
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHCCCcEEEEecC
Q 009635 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 55 ~~~~dVvIIGa-G~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+.|+|.|| |..|...+..|+++|++|+++.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35568999998 999999999999999999999875
No 491
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.04 E-value=0.52 Score=44.03 Aligned_cols=31 Identities=35% Similarity=0.473 Sum_probs=28.1
Q ss_pred eEEEECCChHHHHHHHHHHHCCC-cEEEEecC
Q 009635 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (530)
Q Consensus 59 dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~ 89 (530)
+|+|||||..|.+.|+.|+..|+ +|+++|..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 58999999999999999998888 59999975
No 492
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.04 E-value=0.82 Score=40.17 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=29.1
Q ss_pred CeEEEECC-ChHHHHHHHHHH-HCCCcEEEEecCc
Q 009635 58 LKVVIAGA-GLAGLSTAKYLA-DAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIGa-G~aGl~aA~~L~-~~G~~V~vlEa~~ 90 (530)
..|+|+|| |..|...|..|+ +.|++|+++.++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 34999995 999999999999 8999999998763
No 493
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=86.91 E-value=0.58 Score=41.08 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=30.0
Q ss_pred CeEEEEC-CChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 58 ~dVvIIG-aG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
++|+|+| +|..|...+..|+++|++|+++.++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 3699999 79999999999999999999998864
No 494
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=86.76 E-value=0.67 Score=42.25 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=30.4
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCcEEEEecC
Q 009635 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (530)
Q Consensus 56 ~~~dVvIIGaG-~aGl~aA~~L~~~G~~V~vlEa~ 89 (530)
...+|+|||+| +.|..+|..|.+.|..|+++.++
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 56799999999 67999999999999999999644
No 495
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.65 E-value=0.68 Score=44.96 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
....|+|||.|..|..+|..|...|.+|++.|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 55699999999999999999999999999999764
No 496
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.54 E-value=0.6 Score=45.57 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
....|+|||+|-.|..+|..|...|. +|++++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998764
No 497
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.33 E-value=0.67 Score=47.05 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~ 90 (530)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35799999999999999999999998 699998653
No 498
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.26 E-value=0.72 Score=46.86 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-cEEEEecCcc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~V~vlEa~~~ 91 (530)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 45799999999999999999999998 6999997643
No 499
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.22 E-value=0.83 Score=43.22 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
....|.|||.|..|...|..|+..|++|++++++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 45689999999999999999999999999998764
No 500
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=86.29 E-value=0.14 Score=44.61 Aligned_cols=35 Identities=23% Similarity=0.150 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCcEEEEecCc
Q 009635 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (530)
Q Consensus 56 ~~~dVvIIGaG~aGl~aA~~L~~~G~~V~vlEa~~ 90 (530)
..++|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 45679999999999999999999999999998754
Done!