Your job contains 1 sequence.
>009640
MEILSQMWSLLGLLTVLQNVLPSQLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVN
DLYRHVNLYLNSVNPAGSSTCRRLTLSRSRSSNRISFTVAPNHTVHDSFSGHSLSWTHHV
DTVQDSVEEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDS
GWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSG
KSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRML
KSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCS
EEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVE
SCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAKILSGREVMECDELVITRSPES
VVVVRSPENWDSSPGGKYGNRSKKRKEGTKANFLVRLRSLTKSDSGRKGV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009640
(530 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 920 2.4e-92 1
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 911 2.1e-91 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 883 2.0e-88 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 801 9.7e-80 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 503 1.2e-77 2
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 488 1.5e-77 2
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 777 3.4e-77 1
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 504 5.2e-77 2
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 500 5.2e-77 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 479 1.4e-76 2
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 460 7.5e-76 2
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 492 1.2e-75 2
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 501 2.0e-75 2
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 500 2.0e-75 2
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 485 2.5e-75 2
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 497 5.2e-75 2
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 461 1.1e-72 2
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 459 4.2e-71 2
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 433 4.2e-71 2
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 716 9.9e-71 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 419 4.7e-68 2
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 456 5.4e-65 2
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 328 6.9e-59 2
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 310 3.1e-41 2
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 305 6.8e-25 2
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 202 3.4e-24 2
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 187 1.7e-21 2
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 199 1.9e-21 2
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 270 4.8e-21 1
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 196 5.2e-21 2
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 165 9.1e-21 2
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 173 9.5e-21 2
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 196 1.3e-20 2
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 166 1.4e-20 2
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 171 1.6e-20 2
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 168 3.2e-20 2
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 187 4.5e-20 2
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 166 6.0e-20 2
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 176 9.6e-20 2
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 172 1.4e-19 2
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 172 2.8e-19 2
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 173 3.1e-19 2
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 174 5.2e-19 2
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 163 9.2e-19 2
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 192 4.7e-18 2
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 222 2.3e-15 1
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 199 3.5e-15 1
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 221 5.7e-15 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 216 8.6e-15 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 216 8.6e-15 1
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 134 2.1e-14 2
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 214 2.2e-14 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 153 4.9e-13 2
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 175 2.7e-11 1
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 136 2.4e-08 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 102 1.8e-06 2
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 95 1.9e-06 2
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 96 3.2e-06 2
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 106 3.5e-06 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 105 4.4e-06 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 104 4.5e-06 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 105 5.0e-06 2
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 95 7.6e-06 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 92 7.7e-06 3
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 92 7.7e-06 3
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 96 9.5e-06 2
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 96 9.8e-06 2
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 100 9.9e-06 2
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 105 1.2e-05 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 90 1.2e-05 2
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 90 1.2e-05 2
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 90 1.3e-05 2
UNIPROTKB|F8W938 - symbol:NVL "Nuclear valosin-containing... 100 1.3e-05 2
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 90 1.3e-05 2
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 90 1.3e-05 2
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 90 1.3e-05 2
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 90 1.3e-05 2
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 90 1.3e-05 2
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 90 1.4e-05 2
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 90 1.5e-05 2
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 90 1.5e-05 2
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 90 1.5e-05 2
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 96 1.8e-05 2
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 96 1.8e-05 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 91 1.8e-05 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 91 1.8e-05 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 102 2.0e-05 2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 102 2.0e-05 2
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 90 2.2e-05 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 99 2.2e-05 2
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 134 2.2e-05 1
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 100 2.3e-05 2
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 92 2.3e-05 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 92 2.3e-05 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 89 2.9e-05 2
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 87 2.9e-05 2
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 105 3.0e-05 2
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 105 3.0e-05 2
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 105 3.0e-05 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 105 3.0e-05 2
WARNING: Descriptions of 119 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
Identities = 199/454 (43%), Positives = 280/454 (61%)
Query: 22 PSQLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNS-VNPAGXXX 80
P +L F+ + +FS Y YF+I E +G V+ N+LY V LYL+S V+ AG
Sbjct: 27 PPELRFAFLKFFNRIFHVFSSYCYFDITEIDG---VNTNELYNAVQLYLSSSVSIAGNRL 83
Query: 81 XXXXXXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQDSV-------EEKRSF 133
F ++ N ++ D+F+G ++ W H V Q EEKR F
Sbjct: 84 SLTRAVNSSSIT----FGLSNNDSIVDTFNGVTVLWEHVVTQRQTQTFAWRPLPEEKRGF 139
Query: 134 TLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDS-G--WVSVPFRHP 190
TL++ K+ + +L++YLD++ RA E R +++R L+TN+ GS DS G W SVPF+HP
Sbjct: 140 TLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHP 199
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
STFETLA++P+ K+QI +DL FA G+ FY + GRAWKRGYLLYGPPG+GKSS+IAAMAN
Sbjct: 200 STFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Query: 251 YLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLXXXXXXXXXX 310
YL YD+YDLELT+V NSELR LL++T+++SIIVIEDIDCS++LT +
Sbjct: 260 YLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKK-------NSSN 312
Query: 311 XXXXXXXXEMGSRIASSTCGXXXXXXGEESGR---VTLSGLLNFTDGLWSCCSEEKIIVF 367
+ +R S G GEE G +TLSGLLNFTDGLWSCC E+I VF
Sbjct: 313 VSSQRSYYDAETRNGS---GSGSGGSGEEGGNGNTITLSGLLNFTDGLWSCCGSERIFVF 369
Query: 368 TTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESC--IRA 425
TTNH + +DPAL+R GRMD+H+ + C + K+L KNYLG DV++ +
Sbjct: 370 TTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILLKNYLGYGVEDINGDVLKEMEMVVE 429
Query: 426 GGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAK 459
+TPA + E L++NR + + A++E++ ++++
Sbjct: 430 KAEMTPADVSEALIKNRRDKEKAIRELLEDLKSR 463
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 209/465 (44%), Positives = 281/465 (60%)
Query: 22 PSQLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNS---VNPAGX 78
P L+ LH F ++ +FS + YF+I E +G V+ N+LY V LYL+S VN A
Sbjct: 28 PELRLAFLH-FLTRIRHVFSSHIYFDITEIDG---VNTNELYNAVQLYLSSSVTVNDAVS 83
Query: 79 XXXXXXXXXXXXX--XXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQDSV--------- 127
F ++ N + D F+G ++ W H V VQ V
Sbjct: 84 SSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFNGVTILWEHVV--VQRQVQSFSWRPMP 141
Query: 128 EEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSG---WVS 184
EEKR FTL++ KR + +L +YLD++ ++EE R + ER L+TN+ S D+ W S
Sbjct: 142 EEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEERLLYTNSRGVSLDARSHPWDS 201
Query: 185 VPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSL 244
V F+HPSTF+TLA++P+ KK+I EDL FANG+ FY + GRAWKRGYLLYGPPG+GKSSL
Sbjct: 202 VRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKTGRAWKRGYLLYGPPGTGKSSL 261
Query: 245 IAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLXXXX 304
IAAMANYL YD+YDLELT+V +NSELR LL++T+++SIIVIEDIDCS+ LT
Sbjct: 262 IAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSKSIIVIEDIDCSISLTK-------- 313
Query: 305 XXXXXXXXXXXXXXEMGSRIASSTCGXXXXXXGEESGR-VTLSGLLNFTDGLWSCCSEEK 363
+ GS G EE G VTLSGLLNFTDGLWSCC EK
Sbjct: 314 --------RGKNKKKNGSYEYDP--GLTNGSGLEEPGSSVTLSGLLNFTDGLWSCCGSEK 363
Query: 364 IIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHH---ALFDVVE 420
I VFTTNH + +D AL+R GRMD+HV +G C A K+L KNYL +E + +E
Sbjct: 364 IFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLEEEDMDSVVLKEME 423
Query: 421 SCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAKILSGRE 465
C+ +TPA + EVL+RNR + + A++E+VS ++ +++ R+
Sbjct: 424 ECVEEA-EITPADVSEVLIRNRSDAEKAVREIVSVLKERVVKRRK 467
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 196/454 (43%), Positives = 277/454 (61%)
Query: 22 PSQLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNS-VNPAGXXX 80
P +L + + LFS + YF+I E +G V+ N+LY V LYL+S V+ AG
Sbjct: 27 PPELRFAISKLFNKFFKLFSTFCYFDITEIDG---VNTNELYNAVQLYLSSSVSIAGNRL 83
Query: 81 XXXXXXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQDSV-------EEKRSF 133
F ++ N ++ D+F+ ++ W H V Q EEKR F
Sbjct: 84 SLTRAVNSSSVT----FGLSNNDSIVDTFNSVTVVWEHIVTQRQTQTFAWRPMPEEKRGF 139
Query: 134 TLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDS-G--WVSVPFRHP 190
TL++ K+ + +L +YLD++ +A E R++++R L+TN+ GS DS G W SVPF+HP
Sbjct: 140 TLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNSRGGSLDSRGLPWESVPFKHP 199
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
STF+TLA++P K+QI EDL FA + FY R GRAWKRGYLLYGPPG+GKSS+IAAMAN
Sbjct: 200 STFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Query: 251 YLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLXXXXXXXXXX 310
YL YD+YDLELT+V NSELR LL++T+++SIIVIEDIDCS++LT +R
Sbjct: 260 YLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDIDCSINLT-NR--------NKKQ 310
Query: 311 XXXXXXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTN 370
EM + S G + +TLSGLLNFTDGLWSCC E+I VFTTN
Sbjct: 311 STGSYNEPEM---LTGSGLGDDLG----DGNTITLSGLLNFTDGLWSCCGSERIFVFTTN 363
Query: 371 HRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHH----ALFDVVESCIRAG 426
H + +DPAL+R GRMD+H+ + C + K+L +NYLG E L ++ E RA
Sbjct: 364 HIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDRA- 422
Query: 427 GALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAKI 460
+TPA + E L++NR + + A++E++ +++++
Sbjct: 423 -EITPADVSEALIKNRRDKERAVRELLVDLRSRV 455
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 184/463 (39%), Positives = 260/463 (56%)
Query: 22 PSQLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXX 81
P+ + + ++ + S Y + E+ G+ + Y + YL S + A
Sbjct: 30 PAHFRAYVERYFHKMIGWISYYVDIKFTEYTDE-GLKRSQAYDSIRNYLASKSTA---LA 85
Query: 82 XXXXXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQD-------SVEEKRSFT 134
F++ + + D F G + W +V +Q S EE+R FT
Sbjct: 86 KRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKWYSNVKVIQPQSNYGQRSSEERRHFT 145
Query: 135 LKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSY---DSG-WVSVPFRHP 190
L +RHR ++ YLDHV + ++RER+L+TNN + SG W +VPF HP
Sbjct: 146 LSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNNSSQEWYPWRSGKWSNVPFHHP 205
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
+TFETLA++P+ K+ I +DL F+ GK++Y +VG+ WKRGYLL+GPPG+GKS++IAA+AN
Sbjct: 206 ATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIAN 265
Query: 251 YLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLXXXXXXXXXX 310
+L YDVYDLELT V DNSEL+ LLL TT++SIIVIEDIDCS+DLT R
Sbjct: 266 FLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDIDCSLDLTGQRK----------- 314
Query: 311 XXXXXXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTN 370
E G G ++ +VTLSGLLN DGLWS CS EKIIVFTTN
Sbjct: 315 KKKEEDEEEDGEEKKE---GEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTN 371
Query: 371 HRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESCIRAGGALT 430
D +DPALIR GRMD H+ + C AFKVLAKNYL IE+H L+ +E + ++
Sbjct: 372 FVDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIETHD-LYGEIERKLEETD-MS 429
Query: 431 PAQIGEVLL--RNRGNVDLAMKEVVSAMQAKILSGREVMECDE 471
PA + E L+ + + D+ +K +V ++ + R++ E +E
Sbjct: 430 PADVAETLMPKSDEEDADICIKRLVKTLEEEKEKARKLAEEEE 472
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 503 (182.1 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 106/272 (38%), Positives = 161/272 (59%)
Query: 25 LLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXXXXX 84
L+ ++ + + D F Y ++++PEFN V N LY+ V +YLNS++
Sbjct: 30 LIYMVKLWRRKIIDWFHVYQFYKVPEFND--NVQENHLYQKVYMYLNSLS--SIENSDFT 85
Query: 85 XXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQT 144
+ N V D F G + W + D +D R+F LK+ K ++
Sbjct: 86 NLFTGKKSNEIILRLDRNQVVGDEFLGARVCWINGED--EDGA---RNFVLKIRKADKRR 140
Query: 145 LLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSY------DSG-WVSVPFRHPSTFETLA 197
+L +YL H+ + ++E E+ + E +LF N G + +G W S+PF HP TF+ +A
Sbjct: 141 ILGSYLQHIHTVSDELEQRNTELKLFINVGIDDHLNKKKKKNGRWRSIPFDHPCTFDNIA 200
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
+E LK ++ DL +F GK++Y+R+GR WKR YLLYGP G+GKSS +AAMAN+L YDVY
Sbjct: 201 METDLKNKVKSDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVY 260
Query: 258 DLELTKVTDNSELRALLLQTTNRSIIVIEDID 289
D++L+KV D+S+L+ LLLQT +S+IVIED+D
Sbjct: 261 DIDLSKVVDDSDLKMLLLQTRGKSVIVIEDLD 292
Score = 297 (109.6 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 71/188 (37%), Positives = 104/188 (55%)
Query: 339 ESGRVTLSGLLNFTDG-LWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPH 397
+S V LSG+LNFTD L SC ++E+I+VFT ++ +DPA++R GR+DVH+ C
Sbjct: 298 KSTAVNLSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFT 357
Query: 398 AFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQ 457
AFK LA NYLG++ H LF VE + G +L+PA+IGE+++ NR + A+K V++A+Q
Sbjct: 358 AFKTLANNYLGVKEHK-LFSQVEGIFQNGASLSPAEIGELMIANRNSPTRALKHVINALQ 416
Query: 458 AKILSGREVMECDELVITXXXXXXXXXXXXXNWDSSPGGKYGNRSKKRKEGTKANFLVRL 517
G L++ + S G G S KE K L+R+
Sbjct: 417 T---DGDRRGTGRRLLLENGSRKSTSEDVSDDMSGSLCGGGGGSSPAVKEFRKLYGLLRI 473
Query: 518 RSLTKSDS 525
+S KS S
Sbjct: 474 KSSRKSGS 481
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 488 (176.8 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 110/280 (39%), Positives = 159/280 (56%)
Query: 24 QLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXXXX 83
Q LS + F + + FSPY EI F+ Y N + + YL +
Sbjct: 42 QQLSFVQRFSDRFINFFSPY--VEI-SFSQYEDYQFNHAFAAIETYLGA-----KATDKA 93
Query: 84 XXXXXXXXXXXXXFTVAPNHT-VHDSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHR 142
+ + T V D + G ++ W D+ R+F L +R R
Sbjct: 94 KHLRASQVKESKGLVLKRDETKVRDEYEGGTVWWEMETDSTG-----YRTFKLTFHRRSR 148
Query: 143 QTLLSAYLDHVTSRAEEFERVSRERRLFTNN--GH-G-SYDSGWVSVPFRHPSTFETLAL 198
+ +Y+ +V + + S++ +LFTNN H G S S W + F HP++F TLA+
Sbjct: 149 DIVTDSYIKYVFEEGKSIQAKSKQMKLFTNNPSSHWGTSKKSFWRYIDFEHPASFHTLAM 208
Query: 199 EPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYD 258
+ + K++I DL AF+NGKE+Y ++G+AWKRGYLL+GPPG+GKS++IAAMAN+L Y +YD
Sbjct: 209 DTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYD 268
Query: 259 LELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
LELT + +NSELR LL T+++SIIVIEDIDCS+DLT R
Sbjct: 269 LELTAIRNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKR 308
Score = 311 (114.5 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 61/134 (45%), Positives = 91/134 (67%)
Query: 338 EESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPH 397
E+ VTLSGLLNF DG+WS C +E+II+FTTNH + +DPALIR GRMD+H+ L C
Sbjct: 327 EDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFE 386
Query: 398 AFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDL--AMKEVVSA 455
AFK+LAKNYL +++H LF +ES ++ + PA + E L++ +D ++K+++ A
Sbjct: 387 AFKILAKNYLDLDTH-PLFKKIESLLKET-KIAPADVAENLMKKNTEIDADGSLKDLIQA 444
Query: 456 MQAKI-LSGREVME 468
++ K + G +V E
Sbjct: 445 LEGKKKIHGAQVDE 458
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 179/460 (38%), Positives = 254/460 (55%)
Query: 22 PSQLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXX 81
P Q+ L + + L S + + E+ G+ + Y + YL+S + A
Sbjct: 30 PYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKSQAYDLIRNYLSSKSTARAQRL 89
Query: 82 XXXXXXXXXXXXXXXFTVAPNH-TVHDSFSGHSLSWTHHVDTVQDSVE--EKRSFTLKLP 138
NH V D F G + W+ V D + EKR TL
Sbjct: 90 KANESKNSKSLVLSL----DNHEAVEDVFQGVKVVWSLSVWKSNDQADSSEKRYLTLSFH 145
Query: 139 KRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDS---G-WVSVPFRHPSTFE 194
R+R+ + + YLDHV +E +RER+L+TNN Y + G W +VPF HP+TFE
Sbjct: 146 NRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQDYSAWREGRWSNVPFDHPATFE 205
Query: 195 TLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCY 254
TLA++ + K+ + +DL F GK++Y +VG+ WKRGYLL+GPPG+GKS++I+AMAN+L Y
Sbjct: 206 TLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYLLFGPPGTGKSTMISAMANFLEY 265
Query: 255 DVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLXXXXXXXXXXXXXX 314
DVYDLELT V DNSEL+ L+L T +SI+VIEDIDCS+DLT R
Sbjct: 266 DVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDIDCSLDLTGQRKKKKEEDEDEEEEEKK 325
Query: 315 XXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDS 374
++ R GE +VTLSGLLN DGLWS CS EKIIVFTTN+ D
Sbjct: 326 KEAEKLLKR-----------ERGERESKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDK 374
Query: 375 VDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQI 434
+DPALIR GRMD H+ + C AFKVLAKNYL IESH LF ++ + ++PA +
Sbjct: 375 LDPALIRRGRMDNHIEMSYCRFEAFKVLAKNYLEIESHD-LFGEIKRLVEETD-MSPADV 432
Query: 435 GEVLL--RNRGNVDLAMKEVVSAMQAKILSGREVMECDEL 472
E L+ + + D+ + +V +++ + +++ E +++
Sbjct: 433 AENLMPKSDEDDADICLTRLVKSLEEEKEKAKKLAEEEKM 472
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 504 (182.5 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 115/285 (40%), Positives = 165/285 (57%)
Query: 29 LHSFYESL-QDLFS-PYSYFEIPEFNGYCGVDV--NDLYRHVNLYLNSVNPAGXXXXXXX 84
L +E L Q L Y Y +I F+ Y G +D+Y + YL+ + +
Sbjct: 33 LREHFEPLAQSLIGFIYPYIQIT-FHEYSGERFKRSDVYDAIQSYLSKDSSS---RAKKL 88
Query: 85 XXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWT---HHVDTVQDS----VEEKRSFTLKL 137
++ + + D F G + W H ++ S +E R + LK
Sbjct: 89 TANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKHQSESRAISFYPKADESRFYMLKF 148
Query: 138 PKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGH----GSYDSGWVSVPFRHPSTF 193
+R R+ + YL+HV S + E +RER+L++NN G + W V F HP+TF
Sbjct: 149 HRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNNPSQNWSGYKQTKWSHVTFEHPATF 208
Query: 194 ETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLC 253
+TLA+E + K++I DL F+N K++Y ++G+AWKRGYLL+GPPG+GKS++IAAMAN L
Sbjct: 209 DTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANLLE 268
Query: 254 YDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
YDVYDLELT V DN+ELR LL++T+ +SIIVIEDIDCS+DLT R
Sbjct: 269 YDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDIDCSLDLTGQR 313
Score = 290 (107.1 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 64/141 (45%), Positives = 87/141 (61%)
Query: 337 GEESG-RVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCG 395
GE G +VTLSGLLNF DGLWS C E+IIVFTTN D +DPALIR GRMD H+ + CG
Sbjct: 338 GENKGSKVTLSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCG 397
Query: 396 PHAFKVLAKNYLGI--ESHHALFDVVESCIRAGGA-LTPAQIGEVLLRNRG--NVDLAMK 450
AFKVLA NYL E + LFD ++ + +TPA +GE LL+ ++ +K
Sbjct: 398 FEAFKVLANNYLDAKEEDDNELFDEIKRLLEVEEIKMTPADVGENLLKKSEVETKEICLK 457
Query: 451 EVVSAMQAKILSGREVMECDE 471
++ A++ + + +E +E
Sbjct: 458 RLIEALKEEKEEAKRRIEDEE 478
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 500 (181.1 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 114/282 (40%), Positives = 160/282 (56%)
Query: 24 QLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXXXX 83
Q +S F + + FSPY E+ Y VN + + YL +
Sbjct: 41 QQISFAKRFSDKFINFFSPYVQINFSEYEDY---RVNHAFDPIETYLGA-----KATDKA 92
Query: 84 XXXXXXXXXXXXXFTVAPNHT-VHDSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLP--KR 140
+ + T V D + G + W ++T DS K TLKL +R
Sbjct: 93 KHLRASQVRESKGLVLKRDETKVRDEYEGIRVWW--EMET--DSAGYK---TLKLTFHRR 145
Query: 141 HRQTLLSAYLDHVTSRAEEFERVSRERRLFTNN--GH--GSYDSGWVSVPFRHPSTFETL 196
R + ++Y+ +V + + +++ +LFTNN H S S W + F HP+TFETL
Sbjct: 146 SRDIVTNSYIKYVVEEGKSIDAKNKKMKLFTNNPSSHWGSSKTSFWRYIDFEHPATFETL 205
Query: 197 ALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDV 256
A++P+ K+QI DL AF NGK++Y ++G+AWKRGYLLYGPPG+GKS++IAAMAN L Y +
Sbjct: 206 AMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSI 265
Query: 257 YDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
YDLELT + +NSELR +L T+N+SIIVIEDIDCS+DLT R
Sbjct: 266 YDLELTAIQNNSELRKILTATSNKSIIVIEDIDCSLDLTGKR 307
Score = 294 (108.6 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 60/124 (48%), Positives = 84/124 (67%)
Query: 338 EESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPH 397
E VTLSGLLNF DG+WS C +E+IIVFTTNH +DPALIR GRMD+H+ L C
Sbjct: 327 ENKSFVTLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFE 386
Query: 398 AFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLR-NRG-NVDLAMKEVVSA 455
AFK LAKNYL ++SH LF +ES ++ + PA + E L++ NR + D ++ +++ +
Sbjct: 387 AFKTLAKNYLDLDSH-PLFSKIESLMKETN-IAPADVAENLMKKNRETDADGSLNDLIES 444
Query: 456 MQAK 459
++ K
Sbjct: 445 LERK 448
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 479 (173.7 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 111/283 (39%), Positives = 157/283 (55%)
Query: 29 LHSFYE-SLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXXXXXXXX 87
+H + + FS +SY + G + N ++ YL++
Sbjct: 41 VHEYISHGFRRFFSYFSYQMTAVIEEFGGFEHNQVFEAAEAYLSTKI---SNSTRRIKVN 97
Query: 88 XXXXXXXXXFTVAPNHTVHDSFSGHSLSWT---HHVDT--------VQDSVE-EKRSFTL 135
TV + V D F G LSW HVD + +++ E RS+ L
Sbjct: 98 KLEKQSNYSVTVERDEEVVDIFDGVKLSWILVCRHVDKKDFRNPRDLNSTLKSEVRSYEL 157
Query: 136 KLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPFRHPSTFET 195
K+ + +L +YL V +A ++ + ++FT + SY W SV HPSTF T
Sbjct: 158 SFRKKFKNMVLESYLPFVVEQAASIKQKFKTLKIFTVD---SYSVEWTSVTLDHPSTFRT 214
Query: 196 LALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD 255
LAL+P++KK + EDL F K FY RVG+AWKRGYLLYGPPG+GKSSLIAA+AN+L +D
Sbjct: 215 LALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFD 274
Query: 256 VYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
+YDL+LT + +N+ELR LL+ T NRSI+V+EDIDCS++L DR
Sbjct: 275 IYDLDLTSLNNNAELRRLLMSTANRSILVVEDIDCSIELK-DR 316
Score = 311 (114.5 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 63/117 (53%), Positives = 85/117 (72%)
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
VTLSGLLNF DGLWS C E+IIVFTTN+R+ +DPAL+R GRMD+H+ + C P AFKVL
Sbjct: 330 VTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVL 389
Query: 403 AKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAK 459
A NYL I+ H LF+ +E IR +TPA++ E L+R+ +VD ++ +V ++AK
Sbjct: 390 ASNYLEIQDH-ILFEQIEEFIREI-EVTPAEVAEQLMRS-DSVDKVLQGLVEFLKAK 443
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 460 (167.0 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
Identities = 91/162 (56%), Positives = 116/162 (71%)
Query: 133 FTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPFRHPST 192
F L K+H+ +L++Y+ ++ S+A+E + ERR+ H W SV HPST
Sbjct: 163 FELSFDKKHKDLILNSYVPYIESKAKE---IRDERRILML--HSLNSLRWESVILEHPST 217
Query: 193 FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
FET+A+E LK+ + EDL F KEFY RVG+AWKRGYLLYGPPG+GKSSL+AAMANYL
Sbjct: 218 FETMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYL 277
Query: 253 CYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDL 294
+DVYDL+L V +S+LR LLL T NRSI+VIEDIDC+VDL
Sbjct: 278 KFDVYDLQLASVMRDSDLRRLLLATRNRSILVIEDIDCAVDL 319
Score = 323 (118.8 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
Identities = 63/132 (47%), Positives = 89/132 (67%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
GE G +TLSGLLNF DGLWS C +E+II+FTTNH+D +DPAL+R GRMD+H+ +G C
Sbjct: 333 GESQGPLTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSF 392
Query: 397 HAFKVLAKNYLGIESH---HALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVV 453
FK LA NYLG+ H LF +E I G +TPAQ+ E L+++ + D+A++ +V
Sbjct: 393 QGFKTLASNYLGLSDAAMPHRLFPEIERLID-GEVMTPAQVAEELMKSE-DADVALEGLV 450
Query: 454 SAMQAKILSGRE 465
+ ++ L +E
Sbjct: 451 NVLEKMRLKSKE 462
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 492 (178.3 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 107/280 (38%), Positives = 158/280 (56%)
Query: 24 QLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXXXX 83
Q L + +LFSPY PE + Y N + ++ YL+S
Sbjct: 46 QQLCFAQRVSDHFTNLFSPYVEIHFPESDEY---SFNQAFSAIDTYLDS-----KATDKT 97
Query: 84 XXXXXXXXXXXXXFTVAPNHT-VHDSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHR 142
+ N V D + G ++ W VD + R + L R R
Sbjct: 98 KHLRGSQVKESKGLVLKRNEAKVRDEYKGANVWWERVVDN-----DGNRYYKLTFHNRAR 152
Query: 143 QTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSG---WVSVPFRHPSTFETLALE 199
+ ++Y+ +V + +++ RLFTNN + G W S+ F HP++F+TLA++
Sbjct: 153 TLITNSYIKYVVEEGKSIIVKNKQTRLFTNNLSTQWVFGQNMWRSIEFEHPASFQTLAMD 212
Query: 200 PQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDL 259
P+ K++I DL AF+NGKE+Y ++G+AWKRGYLLYGPPG+GKS++I+AMAN L Y++YDL
Sbjct: 213 PKKKEEIVNDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDL 272
Query: 260 ELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRM 299
ELT V +NSEL+ LL T+++SIIVIEDIDCS D T++R+
Sbjct: 273 ELTAVKNNSELKKLLTATSSKSIIVIEDIDCSADFTSNRI 312
Score = 289 (106.8 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 57/124 (45%), Positives = 86/124 (69%)
Query: 338 EESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPH 397
++ VTLSGLLNF DG+WS C +E+I+VFTTNH + +DPALIR GRMD+H+ L C
Sbjct: 327 KDENSVTLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYE 386
Query: 398 AFKVLAKNYLGIESH--HALFDVVESCIRAGGALTPAQIGEVLL-RNRG-NVDLAMKEVV 453
AFK+LAKNYL ++ H LF +++ + ++PA + E L+ RN+ +VD ++ ++
Sbjct: 387 AFKILAKNYLDLDGDDAHPLFSEIKALLEET-KISPADVAENLMARNQQIDVDKSLNLLI 445
Query: 454 SAMQ 457
SA++
Sbjct: 446 SALE 449
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 501 (181.4 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 98/198 (49%), Positives = 136/198 (68%)
Query: 107 DSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRE 166
D+F L WT+ + S +EKR + L K+ R ++++YL HV + +EE +R R
Sbjct: 117 DTFENSELRWTYVESENEASQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRA 176
Query: 167 RRLFTNNGHGSYD------SGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFY 220
+L++ + S D +GW + HPSTFETLA++P KK+I +D+ F +EFY
Sbjct: 177 VKLYSRDVRASKDDDGMAGAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFY 236
Query: 221 HRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNR 280
RVG+AWKRGYLLYGPPG+GKSSLIAAMANYL +DV+DLEL+ + +N++L+++LL TTNR
Sbjct: 237 KRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTTNR 296
Query: 281 SIIVIEDIDCSVDLTADR 298
SI+VIEDIDCS DR
Sbjct: 297 SILVIEDIDCSSAEVVDR 314
Score = 278 (102.9 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 55/118 (46%), Positives = 83/118 (70%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GRVTLSGLLNF DGLWS +E+IIVFTTNH++ +DPAL+R GRMD+H+++ C F+
Sbjct: 328 GRVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFR 387
Query: 401 VLAKNYLGIES-HHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQ 457
L NYLG+ +H L + +E+ I + +TPA++ E L++ + D+ ++ VVS ++
Sbjct: 388 TLVSNYLGLGGLNHPLCEEIEALIDST-EVTPAELAEELMQE-DDTDVVLRGVVSFVE 443
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 500 (181.1 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 110/278 (39%), Positives = 161/278 (57%)
Query: 29 LHSFYESLQD-LFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNS-VNPAGXXXXXXXXX 86
L S++ SL D F+P S + + G++ N ++ +YL S + P
Sbjct: 40 LRSYFSSLLDRFFTPKSKYLTVIIDENFGLNRNQVFDAAEMYLRSKIGPE----TERLRV 95
Query: 87 XXXXXXXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQTLL 146
++ + D+F + W++ + + KR + L K+ R +L
Sbjct: 96 GKIPKQKHFTISIERGEEILDTFEESEVKWSYVQSENEKGDKVKRYYELTFEKKLRDKVL 155
Query: 147 SAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDS------GWVSVPFRHPSTFETLALEP 200
++YL HV + +EE +R R +L++ + + S D W + HPSTF+TLA++P
Sbjct: 156 NSYLTHVVAESEEIKRNLRVVKLYSRDVYASDDDDGMAGGNWGCINLEHPSTFDTLAMDP 215
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE 260
KK+I +DL F KEFY RVG+AWKRGYLLYGPPG+GKSSLIAAMANYL +DV+DLE
Sbjct: 216 NAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLE 275
Query: 261 LTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
L+ + DN EL+ +LL TTNRSI+VIEDIDC+ ++ DR
Sbjct: 276 LSSIYDNGELKRVLLSTTNRSILVIEDIDCNAEVR-DR 312
Score = 279 (103.3 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 52/120 (43%), Positives = 86/120 (71%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
G+VTLSG+LNF DGLWS +E+IIVFTTNH++ +DPAL+R GRMDVH+++ C F+
Sbjct: 324 GKVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTGLGFR 383
Query: 401 VLAKNYLGIES-HHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAK 459
L NYLG++ +H L + +E+ + + +TPA++ E L+++ + D+ ++ V+S ++ +
Sbjct: 384 TLVSNYLGLDGLNHPLCEEIEALVDST-EVTPAELAEELMQD-DDTDVVLRGVISFVEKR 441
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 485 (175.8 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 113/293 (38%), Positives = 162/293 (55%)
Query: 22 PSQLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYL-NSVNPAGXXX 80
P ++ + + S+ FS I EF G+ N+++ YL ++P+
Sbjct: 84 PDEVHHYISYGFRSIFGYFSSQMTIIIEEFEGFAH---NEVFEAAEAYLATKISPSNKRI 140
Query: 81 XXXXXXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWT-H--HVDTVQ-------DSV--E 128
TV + V D+++G W H HV++ +S
Sbjct: 141 KVSKHEKENNYNV----TVERDEEVVDTYNGVKFQWILHCRHVESKHFHNPRDLNSTLRS 196
Query: 129 EKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFT---NNGHGSYDSGWVSV 185
E RSF L K+ + L +YL + RA ++ + ++FT N +G+Y W SV
Sbjct: 197 EVRSFELNFHKKFKDVALESYLPFMVKRATLMKQEKKTLKIFTLSPENMYGNYSDAWTSV 256
Query: 186 PFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLI 245
HPSTF+TLA++ +K + EDL F ++FY RVG+AWKRGYLLYGPPG+GKSSLI
Sbjct: 257 TLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLI 316
Query: 246 AAMANYLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
AAMAN+L +D+YDLELT V +NSELR LL+ T NRSI+++EDIDCS++L DR
Sbjct: 317 AAMANHLNFDIYDLELTAVNNNSELRRLLIATANRSILIVEDIDCSLELK-DR 368
Score = 293 (108.2 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 57/124 (45%), Positives = 84/124 (67%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKV 401
+VTLSGLLNF DGLWS C +E+II+FTTN+++ +D AL+R GRMD+H+ + C P FK
Sbjct: 387 KVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKA 446
Query: 402 LAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAKIL 461
LA NYL I+ H LF +E I A +TPA++ E L+RN +VD ++ ++ ++ K +
Sbjct: 447 LALNYLEIKEHR-LFSKIEEGIEAT-EVTPAEVAEQLMRN-DSVDKVLEGLIEFLKVKKI 503
Query: 462 SGRE 465
+
Sbjct: 504 ENEQ 507
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 497 (180.0 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 108/280 (38%), Positives = 158/280 (56%)
Query: 29 LHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXXXXXXXXX 88
L F L F PY E++G ++ Y + YL+ + A
Sbjct: 36 LEPFLYRLFGRFYPYIQITFHEYSGE-HFKRSEAYLGIQSYLSKDSSA---RAKKLKANT 91
Query: 89 XXXXXXXXFTVAPNHTVHDSFSGHSLSW-------THHVDTVQDSVEEKRSFTLKLPKRH 141
++ + D F G + W T + EKR + L+ +R
Sbjct: 92 TKGSKSIVLSMDDKEEITDDFEGIRVWWQSKKEGATRQSFSFYPEANEKRYYMLRFHRRD 151
Query: 142 RQTLLSAYLDHVTSRAEEFERVSRERRLFTNN---GHGSYDSGWVSVPFRHPSTFETLAL 198
R+ ++ YL+HV + E+ +RER+L++N HG+ +S W V F HP+TF+TLA+
Sbjct: 152 REVIIERYLEHVMREGKTIEQKNRERKLYSNTPGQSHGN-NSKWSHVTFEHPATFDTLAM 210
Query: 199 EPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYD 258
E K++I DL F+ K++Y ++G+AWKRGYLL+GPPG+GKS++IAAMAN+L YDVYD
Sbjct: 211 EENKKEEIKSDLIKFSKSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLEYDVYD 270
Query: 259 LELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
LELT V DN+ LR LL++T+ +SIIVIEDIDCS++LT R
Sbjct: 271 LELTTVKDNTHLRRLLIETSAKSIIVIEDIDCSLNLTGQR 310
Score = 278 (102.9 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 61/139 (43%), Positives = 87/139 (62%)
Query: 337 GE-ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCG 395
GE + +VTLSGLLNF DGLWS C E+IIVFTTN D +DPALIR GRMD H+ + C
Sbjct: 336 GENKESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYCC 395
Query: 396 PHAFKVLAKNYLGIESHHALFDVVESCIRAGGA-LTPAQIGEVLL--RNRGNVDLAMKEV 452
AFKVLAKNYL +E +F+ ++ + +TPA +GE LL + + +K +
Sbjct: 396 FEAFKVLAKNYLDVEESE-MFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGETCLKRL 454
Query: 453 VSAMQAKILSGREVMECDE 471
+ A++ + ++ +E +E
Sbjct: 455 IEALKEEKEEAKKKVEEEE 473
Score = 37 (18.1 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 25 LLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGV 57
L L FY +Q F YS Y G+
Sbjct: 40 LYRLFGRFYPYIQITFHEYSGEHFKRSEAYLGI 72
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 461 (167.3 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 92/198 (46%), Positives = 128/198 (64%)
Query: 102 NHTVHDSFSGHSLSWT-HHVDTVQDSVEEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEF 160
N + D+F G L WT H V+T + + EKR F L K R+ +++ Y ++ AE+
Sbjct: 116 NTKIIDNFEGIHLEWTLHSVET-KKYLPEKRYFHLTCKKEFREKIMTDYFTYLAKSAEKI 174
Query: 161 ERVSRERRLFTNNGHGSYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFY 220
+++T N S W S F H +TFETLA+EP LKK + +DL AF+ GK+F+
Sbjct: 175 MSHRENLKIYTYNQDRSK---WESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFF 231
Query: 221 HRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNR 280
VGRAWKRGYLLYGPPG+GKSS++AA+AN++ Y +YDL++ V D+ ELR +L T NR
Sbjct: 232 KSVGRAWKRGYLLYGPPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNR 291
Query: 281 SIIVIEDIDCSVDLTADR 298
SI++IEDIDC D + R
Sbjct: 292 SILLIEDIDCGADASRRR 309
Score = 292 (107.8 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
++LSGLLNF DGLWS C EEKII+FTTNH++ +DPAL+R GRMDVH+ + C P FK L
Sbjct: 336 ISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKL 395
Query: 403 AKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAKILS 462
YL + H LFD +E I + TPA++ + L+ ++ N D+A+K + ++ K L
Sbjct: 396 VALYLKTDEH-VLFDPIEKLILEVSS-TPAEVTQQLMASK-NADIALKGLAEFLENKKLK 452
Query: 463 GREVMECDE 471
E +E
Sbjct: 453 KGEDSSVEE 461
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 459 (166.6 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 86/166 (51%), Positives = 120/166 (72%)
Query: 129 EKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPFR 188
++ S L K+HR ++++Y+ +V S+A+E V+ +RR+ + + W SV F+
Sbjct: 149 QRESLELSFDKKHRDLVVNSYIPYVESKAKE---VNNKRRILKMHCYSHMAQTWQSVNFK 205
Query: 189 HPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAM 248
HPSTF+T+A+ LK+ + EDL F K+FY RVG+AWKRGYLLYGPPG+GKSSL+AAM
Sbjct: 206 HPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAM 265
Query: 249 ANYLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDL 294
ANYL +D+YDL+L V ++ LR+LLL T N SI++IEDIDCSVDL
Sbjct: 266 ANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDIDCSVDL 311
Score = 279 (103.3 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 59/133 (44%), Positives = 85/133 (63%)
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
+TLSGLLN DGLWS C E+II+FTTN+++ +DPAL+R GRMD+H+ +G C FK L
Sbjct: 334 LTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIYMGHCSFQGFKTL 393
Query: 403 AKNYLGIESH----HALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQA 458
A NYLG+ H L ++ I G LTPAQ+ E L+++ + D A++ +V ++
Sbjct: 394 ASNYLGLSDENDDTHPLCPDIKHLID-GHVLTPAQVAEELMKDE-DADAALEGLVKVLKR 451
Query: 459 KILSGREVMECDE 471
K L E +CD+
Sbjct: 452 KRL---EPKKCDD 461
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 433 (157.5 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 97/279 (34%), Positives = 148/279 (53%)
Query: 24 QLLSLLHSFYESLQDLFSPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAGXXXXXX 83
Q + + + + + FSPY+Y E GY N + V YL + +
Sbjct: 40 QRIPIFKRLSDKILEFFSPYAYIRFREIEGY---RYNYAFAAVKTYLGAKVNSEVKNLKG 96
Query: 84 XXXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQ 143
V + + + G + W + V+ K+ L + +
Sbjct: 97 NQVKENMSLDLKRDDVK----IEEEYEGVKMWWE-----IFRCVKGKKICRLTFHRSNWD 147
Query: 144 TLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSG----WVSVPFRHPSTFETLALE 199
+ +YL +V + + ++ + NN ++ + W F HP+TF+TLA++
Sbjct: 148 VVTGSYLRYVVEEGKSIKARKKKVMVLMNNPSLNWKTSMKGLWTCTEFEHPATFDTLAMD 207
Query: 200 PQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDL 259
K +I DL AF +GKE+Y R+G+AWKRGYLLYGPPG+GKS++IAAMAN + Y++YDL
Sbjct: 208 IDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDL 267
Query: 260 ELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
ELT + +N EL+ LL+ TTN+SIIVIEDIDCS+DLT +R
Sbjct: 268 ELTSIGNNWELKKLLIATTNKSIIVIEDIDCSLDLTGER 306
Score = 305 (112.4 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 61/121 (50%), Positives = 85/121 (70%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G++S VTLSGLLNF DG+WS C +E+I+VFTTNH +D ALIR GRMD+H+ L C
Sbjct: 317 GKKSNAVTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSYCTF 376
Query: 397 HAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAM 456
AFK+LAKNYL I+SHH LF +ES ++ +TPA + E ++ VD ++K ++ A+
Sbjct: 377 GAFKILAKNYLNIDSHH-LFGEIESLLKET-KITPADVAEHMMAKE--VDGSLKGLIRAL 432
Query: 457 Q 457
+
Sbjct: 433 E 433
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 165/401 (41%), Positives = 224/401 (55%)
Query: 22 PSQLLSLLHSFYESLQD-LF---SPYSYFEIPEFNGYCGVDVNDLYRHVNLYLNSVNPAG 77
P QL L + + D LF S + Y PE+ G G+ + Y + YL+S++ A
Sbjct: 16 PYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGE-GLSKSRAYDEIGNYLSSISTA- 73
Query: 78 XXXXXXXXXXXXXXXXXXXFTVAPNHTVHDSFSGHSLSWTHHVDTVQD--SVEEKRSFTL 135
+ + V F G ++ W+ V +D + +E R TL
Sbjct: 74 --RAKRLKAKESENSKSLVLCLDDDEAVVVVFQGVNVVWSSTVVDKEDKHNSKEGRYLTL 131
Query: 136 KLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDS---G-WVSVPFRHPS 191
HR + + Y+DHV +E +RER+L+TNN SY S G W +VPF H +
Sbjct: 132 TFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWWEGLWSNVPFNHHA 191
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
+FETL ++ K++I +DL F GK++Y +V + WKRGYLL+GPPG+GKS++I+A+AN+
Sbjct: 192 SFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKSTMISAIANF 251
Query: 252 LCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLXXXXXXXXXXX 311
L YDVYDLELT V DN+EL+ L+L T +SI+VIEDIDCS++LT R
Sbjct: 252 LEYDVYDLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLELTEHRK----KKKEEDED 307
Query: 312 XXXXXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNH 371
E R++ G VTLSGLLN DGLWS CS+EKII+FTTN
Sbjct: 308 KEEKKEAENLKRVS-----------GNNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNF 356
Query: 372 RDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESH 412
D++DPALIR GRMD H+ + C AFKVLAKNYL ESH
Sbjct: 357 VDNLDPALIRRGRMDYHIEMSYCRFEAFKVLAKNYLENESH 397
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 419 (152.6 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 83/201 (41%), Positives = 128/201 (63%)
Query: 105 VHDSFSGHSLSWTHHVDTVQDSV-----------EEKRSFTLKLPKRHRQTLLSAYLDHV 153
V D + G + W VD+ + ++ ++ L K+H + +L++Y+ +V
Sbjct: 114 VSDIYQGIEVKWRFCVDSNKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYV 173
Query: 154 TSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAF 213
S+A+ ++ ER++ + W SV HPSTF+T+A+ +LK+ + DL F
Sbjct: 174 ESKAKV---INNERKILKMYSYCCMYLKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRF 230
Query: 214 ANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRAL 273
K+FY RVG+ WKRGYLLYGPPG+GK+SL+AA+ANYL +D+YDL+L V ++++LR L
Sbjct: 231 IRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRL 290
Query: 274 LLQTTNRSIIVIEDIDCSVDL 294
LL TTN SI+++EDIDC+VDL
Sbjct: 291 LLGTTNSSILLVEDIDCAVDL 311
Score = 290 (107.1 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 59/125 (47%), Positives = 85/125 (68%)
Query: 340 SGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAF 399
S +TLSGLL DGLWS C +E+I++FTT H++ +DPAL+R GRMD+H+ +G C F
Sbjct: 326 SSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFDVF 385
Query: 400 KVLAKNYLGIESH---HALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAM 456
K LA NYLG+ SH H L+ +E I+ G LTPAQ+ E L++N + D+A++ +V +
Sbjct: 386 KTLASNYLGL-SHDDPHHLYPEIERLIK-GEVLTPAQVAEELMKNE-DPDVALEGLVKVL 442
Query: 457 QAKIL 461
+ K L
Sbjct: 443 KRKRL 447
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 456 (165.6 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 90/206 (43%), Positives = 128/206 (62%)
Query: 99 VAPNHTVHDSFSGHSLSWTH------HVDTVQDSVEEK----RSFTLKLPKRHRQTLLSA 148
++ V D + G L W + V + EE + F L K+H+ ++ +
Sbjct: 84 LSQGEVVSDVYKGIELKWRYLEGRNKKTTVVGEETEEAIVNWQCFELSFDKKHKDLVVKS 143
Query: 149 YLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPFRHPSTFETLALEPQLKKQITE 208
Y+ +V +A+ + ERR+ + + SY W SV F HPSTF T+A+ P+LK + E
Sbjct: 144 YIAYVERKAKV---IKEERRIIKMHSYSSYTLRWQSVKFEHPSTFHTMAMTPKLKSSVME 200
Query: 209 DLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNS 268
DL F K++Y RVG+AWKR Y LYGPPG+GKSSL+AAMANYL +D+YDL+L V ++
Sbjct: 201 DLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANYLKFDIYDLQLANVQGDA 260
Query: 269 ELRALLLQTTNRSIIVIEDIDCSVDL 294
+LR+LLL T N SI+++EDIDCSVDL
Sbjct: 261 QLRSLLLATNNSSILLVEDIDCSVDL 286
Score = 224 (83.9 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
+TLSGLLN DGLWS C +E+I++FTTN+++ +DPAL+R G MD+H+ LG C FK+L
Sbjct: 306 LTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHIYLGHCSFEGFKIL 365
Query: 403 AKNYLGI----ESHHALFDVVESCI 423
A NYLG+ + H L+ ++ I
Sbjct: 366 ASNYLGMPHDSDDPHRLYPDIKRLI 390
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 328 (120.5 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 59/99 (59%), Positives = 79/99 (79%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
+EP+LK + DL AF+NGK+F+ VGRAWKRGYLLYGPPG+GKSSL+AA+AN++ Y +Y
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 258 DLELTKVTDNSELRALLLQTTNRSIIVIEDIDCS-VDLT 295
DL++ V D++ LR +L T NRSI++IED+DCS D T
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADTT 99
Score = 294 (108.6 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 62/125 (49%), Positives = 85/125 (68%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKV 401
+VTLSGLLNF DGLWS C EE+II+FTTNH++ +DPAL+R GRMDVH+ + C P FK
Sbjct: 123 KVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIVFKK 182
Query: 402 LAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAKIL 461
LA YL IE H LFD +E A TPA+I E L+ ++ + D+ +K +V +++K +
Sbjct: 183 LAALYLEIEEHE-LFDPIEKMFLEVKA-TPAEITEKLMVSK-DPDVTLKGLVEFLESKKM 239
Query: 462 SGREV 466
+ V
Sbjct: 240 TKESV 244
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 310 (114.2 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 67/187 (35%), Positives = 112/187 (59%)
Query: 107 DSFSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRE 166
D + G L W VD K+ F L+ ++HR + +Y+ V S+A+E + S++
Sbjct: 81 DIYQGAKLKWRIFVDKNNIGNIPKQCFELRFDEKHRDLVFDSYIPFVESKAKEIK--SKK 138
Query: 167 RRLFTNNGHGSYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRA 226
R L + D+ W + H S+FET+ ++ LK+++ +D+ F + ++FY RVGR
Sbjct: 139 RILEMHTYSHCCDT-WETKILDHHSSFETIVMKEDLKRRLIDDIDLFISKEDFYKRVGRH 197
Query: 227 WKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIE 286
W R YLL+G PG+GK+SL+AA+A YL +DVY++ TD + R L+ + + SI+++E
Sbjct: 198 WMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNITQGVKTD-FDTRRLIRRVEDSSILLVE 256
Query: 287 DIDCSVD 293
DID S++
Sbjct: 257 DIDTSLE 263
Score = 170 (64.9 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 45/126 (35%), Positives = 75/126 (59%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHA 398
E +V LS LL+ WS + ++++FTTN+++ D L+ C RM++ + +G C
Sbjct: 263 EGSKVALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLL-C-RMEMKIYMGHCCFED 319
Query: 399 FKVLAKNYLGIESH-----HALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVV 453
FK LA NYLGI SH H L+ ++ I G A+TP Q+ E L++++ +VD+A++ +V
Sbjct: 320 FKTLASNYLGI-SHDNDAPHRLYPDIKRLID-GQAVTPGQVVEELMKSQ-DVDVALQSLV 376
Query: 454 SAMQAK 459
+K
Sbjct: 377 RYSSSK 382
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 305 (112.4 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
Identities = 87/292 (29%), Positives = 137/292 (46%)
Query: 109 FSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQTLLS---AYLDHVTSRAEEFERVSR 165
F+G L++ + S + K P+R + + A L + A+ +
Sbjct: 185 FNGRPLAFIREKQDDKSSGGGYYGYGTKAPERLYISCIGRDPAVLKELLLEAQRYYVAKD 244
Query: 166 ERRLFTNNGH--GSYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGK--EFYH 221
+ GH GSY W R P T+ L+ K +D+ + + + +Y+
Sbjct: 245 KNNTVIYRGHKSGSYTE-WSRCMARAPRALSTVVLDKAQKDAFIDDIKDYLHPRTRRWYN 303
Query: 222 RVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELT-KVTDNSELRALLLQTTNR 280
G ++RGYLL+GPPG+GK+SL A A L ++Y L L+ K D EL AL R
Sbjct: 304 NRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLGLELYLLNLSSKSLDEDELMALFTDLPTR 363
Query: 281 SIIVIEDIDCSVDLTADRMLXXXXXXXXXXXXXXXXXXEMGSRIASSTCGXXXXXXGEES 340
I+++ED+DC+ + + E G +S T E+
Sbjct: 364 CIVLLEDVDCAG--MSQKRTPGSSSNDDNGNSASPELQEQGEGNSSGTTTGGTGVF-EKQ 420
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
G V+LSGLLN DG+ +C E +I+V TTNH + +DPAL+R GR+D+ ++ G
Sbjct: 421 G-VSLSGLLNVIDGVAAC--EGRILVMTTNHPEKLDPALVRPGRIDLSIAFG 469
Score = 41 (19.5 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 427 GALTPAQIGEVLLRNRGNVDLAMKE 451
G TPA+I LL ++ + + A++E
Sbjct: 552 GEFTPAEIQGYLLNHKTDPERAIEE 576
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 202 (76.2 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 43/109 (39%), Positives = 67/109 (61%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF HP + ++ LE +KK IT+D+ F ++Y G ++RGYLLYGPPGSGK+
Sbjct: 197 PFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKT 256
Query: 243 SLIAAMANYLCYDVYDLELTK--VTDNSELRALLLQTTNRSIIVIEDID 289
S + A+A L YD+ L L + +TD+ L LL ++++++ED+D
Sbjct: 257 SFLYALAGELDYDICVLNLAEKGLTDD-RLNHLLSNVPPKAVVLLEDVD 304
Score = 146 (56.5 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
VT SGLLN DG+ S S+E+II TTNH + +DPAL+R GR+DV LG P + +
Sbjct: 322 VTFSGLLNALDGVTS--SDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREM 379
Query: 403 AKNYLGIESHHA--LFDVV 419
+ G A L D+V
Sbjct: 380 FTRFYGHSPEMADDLSDIV 398
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 187 (70.9 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 34/108 (31%), Positives = 65/108 (60%)
Query: 182 WVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGK 241
W + ++ +++ L+ + +++ DLT F +GK++Y G ++RGYLLYGPPGSGK
Sbjct: 236 WECIACQNKRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGK 295
Query: 242 SSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDID 289
+S I +MA + + ++K + + +++ + +I+V+EDID
Sbjct: 296 TSFILSMAGNFGKSISIMNMSKGIHDGNIHSIIQKCNKDTILVLEDID 343
Score = 141 (54.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 35/106 (33%), Positives = 59/106 (55%)
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
+T SGLLN DGL S S+ +I++ TTNH + + PALIR GR+D+ V H +++
Sbjct: 360 LTFSGLLNAIDGLAS--SDGRILMMTTNHLERLSPALIRPGRIDLKVKFDYASNHQIELM 417
Query: 403 AKNYLGIESHHALFDVVESCIRAGGALTPAQI-GEVLLRNRGNVDL 447
K + + +H L D + S + ++ AQ+ G ++ ++L
Sbjct: 418 FKRFFD-QKYHYLIDSINSKLE-NHQISTAQLQGWFIIHRNSPLNL 461
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 199 (75.1 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 42/106 (39%), Positives = 68/106 (64%)
Query: 188 RHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAA 247
R T +++ L+ +K++I ED+ F + +YH G ++RGYLLYGPPG+GKSS I A
Sbjct: 244 RRKRTLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQA 303
Query: 248 MANYLCYDVYDLELTK--VTDNSELRALLLQTTNRSIIVIEDIDCS 291
+A L YD+ L L++ +TD+ L LL R+++++ED+D +
Sbjct: 304 VAGELDYDIAILNLSERGMTDD-RLNRLLTIVPKRTLVLLEDVDAA 348
Score = 125 (49.1 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
G VT SGLLN DG+ S +EE+I+ TTNH + +D AL+R GR+D+ V +G
Sbjct: 360 GYRGANVTFSGLLNALDGVAS--AEERIVFLTTNHVERLDEALVRPGRVDMTVRIG 413
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 270 (100.1 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 71/215 (33%), Positives = 104/215 (48%)
Query: 187 FRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSS 243
F HP ++ L+ + I +D+ F N ++Y+ G ++RGYLLYGPPG+GKSS
Sbjct: 197 FGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSS 256
Query: 244 LIAAMANYLCYDVYDLELT-KVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLXX 302
I A+A L + L L K ++ L LL RSII++EDID ++ T + L
Sbjct: 257 FITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQ-TGNHDLSA 315
Query: 303 XXXXXXXXXXXXXXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEE 362
G G G + +T SGLLN DG+ SE
Sbjct: 316 KSNSANAPSISSGGLQYQGYY------GNPSVSSGGSA--LTFSGLLNALDGV--AASEG 365
Query: 363 KIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPH 397
+I+ TTNH + +D LIR GR+D+ + +G C +
Sbjct: 366 RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSY 400
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 196 (74.1 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 56/160 (35%), Positives = 86/160 (53%)
Query: 144 TLLSAYLDH-----VTSRAEEFERVSRERR--LFTNNGHGSYDSGWVSVPFRHPSTFETL 196
TL + Y D + S A+ +RE + +FT S+ W PF P + L
Sbjct: 160 TLTTLYRDRKLFNDLLSEAKSLALKAREGKTVIFT-----SWGPEWR--PFGQPRSKRLL 212
Query: 197 A---LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLC 253
L+ + + I D+ F E+YH+ G ++RGYLLYGPPGSGK+S I A+A L
Sbjct: 213 GSVILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELD 272
Query: 254 YDVYDLELTK--VTDNSELRALLLQTTNRSIIVIEDIDCS 291
Y++ L L++ +TD+ L L+ NRSI+++ED+D +
Sbjct: 273 YNICILNLSENNLTDD-RLNHLMNHIPNRSILLLEDVDAA 311
Score = 122 (48.0 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G +G VT SGLLN DG+ S +EE I TTNH + +DPAL+R GR+D V +
Sbjct: 322 GFNNG-VTFSGLLNALDGVAS--AEECITFMTTNHPEKLDPALLRPGRVDYKVMIDNATE 378
Query: 397 HAFK 400
H K
Sbjct: 379 HQVK 382
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 165 (63.1 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ L+ L +I D+ F + ++Y G ++RGYLLYGPPG GKS
Sbjct: 178 PFGYPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKS 237
Query: 243 SLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDCS 291
S I A+A L + + L LT + + L LL +S++++ED+D +
Sbjct: 238 SFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 153 (58.9 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTNH D +DPALIR GR+D+ +G C
Sbjct: 305 GRLTFSGLLNALDGVAS--TEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLT 362
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI 434
+ + + ++ + E +RA ++PAQ+
Sbjct: 363 QMFQRFYPGQAPSLAENFAEHVLRATNQISPAQV 396
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 173 (66.0 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 43/119 (36%), Positives = 65/119 (54%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ LE L +I D+ F + ++Y G ++RGYLLYGPPG GKS
Sbjct: 178 PFGYPRRRRPLNSVVLEQGLADRIVRDIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKS 237
Query: 243 SLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDC---SVDLTAD 297
S I A+A L + + L LT + + L LL +S++++ED+D S DL A+
Sbjct: 238 SFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE 296
Score = 144 (55.7 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTNH D +DPALIR GR+D+ +G C
Sbjct: 305 GRLTFSGLLNALDGVAS--TEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCSRWQLT 362
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI 434
+ + + ++ + ++A ++PAQ+
Sbjct: 363 QMFQRFYPGQAPSLAESFADRALQATTQISPAQV 396
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 196 (74.1 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 58/202 (28%), Positives = 94/202 (46%)
Query: 159 EFERVSRERRLFTNNGHGSYDSG-WVSVPFRHPSTFETLALEPQLKKQITEDLTAFANG- 216
++ R R + SY+ W S R +T+ + Q+KK + D+ + +
Sbjct: 218 DWGEAQRARYVTVRTCKKSYNGAHWDSTILRPTRPIQTVHFDEQVKKDLIADIINYLDPH 277
Query: 217 -KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLL 275
++FYH+ G ++RGYLL+GPPG+GK+SL A+A+ ++Y L + + ++ EL ++
Sbjct: 278 TRDFYHQRGIPYRRGYLLHGPPGTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFD 337
Query: 276 QTTNRSIIVIEDIDCSVDLTADRMLXXXXXXXXXXXXXXXXXXEMGSRIASSTCGXXXXX 335
+ R II++EDID +V + L E
Sbjct: 338 ELPPRCIILLEDID-AVGIPRRNELAARMTGLDDKDDDEDDEDEEN-------------- 382
Query: 336 XGEESGRVTLSGLLNFTDGLWS 357
G GR TLSGLLN DG+ S
Sbjct: 383 -GSGRGRSTLSGLLNVLDGVAS 403
Score = 125 (49.1 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G GR TLSGLLN DG+ S E +I+ T+N D +DPAL+R GR+D + LG
Sbjct: 383 GSGRGRSTLSGLLNVLDGVAS--QEGRIVFMTSNLADKLDPALVRPGRIDRKIFLGNINQ 440
Query: 397 HAFKVL 402
+ +++
Sbjct: 441 ESARLM 446
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 166 (63.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 180 SGWVSVPF-RHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPG 238
S W + + R +++ L+ L +I +D+ F + ++Y G ++RGYLLYGPPG
Sbjct: 174 SEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPG 233
Query: 239 SGKSSLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDCS 291
GKSS I A+A L + + L LT + + L LL +S++++ED+D +
Sbjct: 234 CGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 150 (57.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTNH D +DPALIR GR+D+ +G C
Sbjct: 305 GRLTFSGLLNALDGVAS--TEARIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHWQLT 362
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI 434
+ + + ++ + E ++A ++PAQ+
Sbjct: 363 QMFQRFYPGQAPSLAENFAEHVLKATSQISPAQV 396
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 171 (65.3 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 42/119 (35%), Positives = 66/119 (55%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ LE + ++I D+ F + ++Y G ++RGYLLYGPPG GKS
Sbjct: 178 PFGYPRRRRPLNSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKS 237
Query: 243 SLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDC---SVDLTAD 297
S I A+A L + + L LT + + L LL +S++++ED+D S DL A+
Sbjct: 238 SFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE 296
Score = 144 (55.7 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 33/94 (35%), Positives = 54/94 (57%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTNH D +DPALIR GR+D+ +G C
Sbjct: 305 GRLTFSGLLNALDGVAS--TEARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLT 362
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI 434
+ + + ++ + + ++A ++PAQ+
Sbjct: 363 QMFQRFYPGQATSLAENFADRVLQATTQISPAQV 396
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 168 (64.2 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 44/111 (39%), Positives = 62/111 (55%)
Query: 186 PFRHPSTFE---TLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF HP ++ L+ ++I D F +Y + G ++RGYLLYGPPG GKS
Sbjct: 179 PFGHPRRRRPTGSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKS 238
Query: 243 SLIAAMANYLCYDVYDLELTK--VTDNSELRALLLQTTNRSIIVIEDIDCS 291
S I A+A L Y V L L++ +TD+ L LL +SII++EDID +
Sbjct: 239 SFITALAGELEYSVCLLNLSERGLTDD-RLNHLLNVAPEQSIILLEDIDAA 288
Score = 145 (56.1 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKV 401
R+T SGLLN DG+ S +E +I+ TTN+ D +DPAL+R GR+D+ +G C + +
Sbjct: 307 RITFSGLLNCLDGVGS--TEARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEE 364
Query: 402 LAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNR 442
+ KN+ + + G + +PAQI ++++
Sbjct: 365 MFKNFFASSDTTKAEEFGKRVNSFGRSASPAQIQGFFMKHK 405
Score = 43 (20.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 178 YDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFY 220
Y W+ V +TL L + + T LTAF N K Y
Sbjct: 109 YKGNWIQVERTREQ--QTLDLHMGVPWE-TVTLTAFGNNKGIY 148
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 187 (70.9 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 43/121 (35%), Positives = 69/121 (57%)
Query: 182 WV--SVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGS 239
W+ VP R E++ L+ ++ +++ ED F + +Y G ++RGYL YGPPG+
Sbjct: 196 WIRFGVP-RKKRDIESVILDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGT 254
Query: 240 GKSSLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
GKSS I+A+A++ Y V L L++ T D+ L LL S++++EDID + D
Sbjct: 255 GKSSFISALASHFGYSVCLLSLSERTLDDDRLNHLLNTAPPNSVVILEDIDAAFVSREDP 314
Query: 299 M 299
M
Sbjct: 315 M 315
Score = 123 (48.4 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 36/100 (36%), Positives = 49/100 (49%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKV 401
RVT SGLLN DG+ C+EE++ TTN+ + +DPALIR GR+D G
Sbjct: 326 RVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVDRKQYFGNATDGMLSK 383
Query: 402 LAKNYLGIESHHALFD-VVESCIRAGGALTPAQI-GEVLL 439
+ + S L D V+ L+PA I G L+
Sbjct: 384 MFSRFYRQPSDSVLADEFVKRVSEHKTELSPAMIQGHFLM 423
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 166 (63.5 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 180 SGWVSVPF-RHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPG 238
S W + + R +++ L+ L +I +D+ F + ++Y G ++RGYLLYGPPG
Sbjct: 174 SEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPG 233
Query: 239 SGKSSLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDCS 291
GKSS I A+A L + + L LT + + L LL +S++++ED+D +
Sbjct: 234 CGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 144 (55.7 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 33/94 (35%), Positives = 54/94 (57%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTN+ D +DPALIR GR+D+ +G C
Sbjct: 305 GRLTFSGLLNALDGVAS--TEARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLT 362
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI 434
+ + + ++ + E ++A ++PAQ+
Sbjct: 363 QMFQRFYPGQAPSLAENFAEHVLKATSEISPAQV 396
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 176 (67.0 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 48/151 (31%), Positives = 75/151 (49%)
Query: 152 HVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPF-RHPSTFETLALEPQLKKQITEDL 210
++ A E +E R G+ W F R ++ LE + +++ ED+
Sbjct: 149 NILQEARELALQQQEGRTIMYTAMGTE---WRQFGFPRRRRPLSSVVLEKGVSERLVEDV 205
Query: 211 TAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELT-KVTDNSE 269
F + ++Y G ++RGYLLYGPPG GKSS I A+A L + + L L+ + +
Sbjct: 206 KEFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDR 265
Query: 270 LRALLLQTTNRSIIVIEDIDC---SVDLTAD 297
L LL +SII++ED+D S DL A+
Sbjct: 266 LNYLLSVAPQQSIILLEDVDAAFVSRDLAAE 296
Score = 131 (51.2 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTN+ D +DPAL+R GR+D+ +G C
Sbjct: 305 GRLTFSGLLNALDGVAS--TEARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLA 362
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI-GEVLL 439
+ + + + A E + ++ AQ+ G +L
Sbjct: 363 RMFQRFYPEQPPAAAERFAEQALAVSKQISAAQVQGHFML 402
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 172 (65.6 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 50/162 (30%), Positives = 75/162 (46%)
Query: 132 SFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPF-RHP 190
S T R RQT + + A E E R G+ W F R
Sbjct: 134 SVTFTALGRDRQTFFN-----ILQEARELALKQEEGRTVMYTAMGAE---WRPFGFPRRR 185
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
++ LE + ++I +D+ F ++Y G ++RGYLLYGPPG GKSS I A+A
Sbjct: 186 RPLSSVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAG 245
Query: 251 YLCYDVYDLELT-KVTDNSELRALLLQTTNRSIIVIEDIDCS 291
L Y + + L+ + + L LL +SII++ED+D +
Sbjct: 246 ELGYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAA 287
Score = 134 (52.2 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 36/100 (36%), Positives = 53/100 (53%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S SE +I+ TTN + +DPAL+R GR+D+ +G C
Sbjct: 306 GRLTFSGLLNALDGVAS--SEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLT 363
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI-GEVLL 439
+ + + ES E + A L+ AQ+ G +L
Sbjct: 364 QMFRRFYPQESAAEADHFSEQALAAHTDLSAAQVQGHFML 403
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 172 (65.6 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 49/152 (32%), Positives = 76/152 (50%)
Query: 152 HVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPF-RHPSTFETLALEPQLKKQITEDL 210
++ A E +E R G+ W F R ++ LE + +++ ED+
Sbjct: 149 NILQEARELALQQQEGRTIMYTAMGTE---WRQFGFPRRRRPLSSVVLEKGVSERLVEDV 205
Query: 211 TAFANGKEFYHRVGRA-WKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELT-KVTDNS 268
F + ++Y G+A +RGYLLYGPPG GKSS I A+A L + + L L+ + +
Sbjct: 206 KEFIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDD 265
Query: 269 ELRALLLQTTNRSIIVIEDIDC---SVDLTAD 297
L LL +SII++ED+D S DL A+
Sbjct: 266 RLNYLLSVAPQQSIILLEDVDAAFVSRDLAAE 297
Score = 131 (51.2 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTN+ D +DPAL+R GR+D+ +G C
Sbjct: 306 GRLTFSGLLNALDGVAS--TEARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLA 363
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI-GEVLL 439
+ + + + A E + ++ AQ+ G +L
Sbjct: 364 RMFQRFYPEQPPAAAERFAEQALAVSKQISAAQVQGHFML 403
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 173 (66.0 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 39/99 (39%), Positives = 63/99 (63%)
Query: 195 TLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCY 254
++ L+ +K+ I +D+ F ++Y G ++RGYLLYGPPGSGK+S I A+A L Y
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 255 DVYDLELTK--VTDNSELRALLLQTTNRSIIVIEDIDCS 291
++ L L++ +TD+ L L+ RSI+++EDID +
Sbjct: 287 NICILNLSENNLTDD-RLNHLMNNMPERSILLLEDIDAA 324
Score = 131 (51.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 44/125 (35%), Positives = 61/125 (48%)
Query: 337 GEES--GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
GE+ VT SGLLN DG+ S SEE I TTNH + +D A++R GR+D V +G
Sbjct: 332 GEQGFHSSVTFSGLLNALDGVTS--SEETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNA 389
Query: 395 GPHAF-KVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVV 453
P+ K+ K Y G F V S ++ AQ+ + + N+ A+K V
Sbjct: 390 TPYQVEKMFMKFYPGETDICKKF--VNSVKELDITVSTAQLQGLFVMNKDAPHDALKMVS 447
Query: 454 SAMQA 458
S A
Sbjct: 448 SLRNA 452
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 174 (66.3 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 46/142 (32%), Positives = 77/142 (54%)
Query: 151 DHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPF-RHPSTFETLALEPQLKKQITED 209
+HV S A + ++ + N G W + R ++ E LK+ I ED
Sbjct: 197 EHVFSEAHALAKSAQAGKTPVYNIQGM---SWAQLGLPRRKRPLASVVFEKGLKEAIVED 253
Query: 210 LTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTK--VTDN 267
+ F + ++Y G ++R YLL+GPPGSGKSS I A+A L Y++ + L + +TD+
Sbjct: 254 VQDFLSRHQWYADRGIPYRRTYLLHGPPGSGKSSFIHALAGELDYNLAIVNLVERGLTDD 313
Query: 268 SELRALLLQTTNRSIIVIEDID 289
+L +L++ RSI+++ED+D
Sbjct: 314 -KLANMLMRLPPRSILLLEDVD 334
Score = 129 (50.5 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G VT SGLLN DG+ E++I TTN+ + +DPALIR GR+DV V +G P
Sbjct: 347 GYSGATVTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPALIRPGRVDVKVRVGEATP 404
Query: 397 HAFKVLAKNYLG 408
L + G
Sbjct: 405 EQAAELWSRFYG 416
Score = 42 (19.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 419 VESCIRAGGALTPAQIGEVLLRNRGNVD 446
V+ +R G A TP Q E+ R G+VD
Sbjct: 393 VDVKVRVGEA-TPEQAAELWSRFYGDVD 419
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 163 (62.4 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 42/114 (36%), Positives = 63/114 (55%)
Query: 188 RHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAA 247
R P T ++ L L +I D+ F + ++Y G ++RGYLLYGPPG GKSS I A
Sbjct: 185 RRPLT--SVVLGQGLADRIVRDVREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITA 242
Query: 248 MANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDC---SVDLTAD 297
+A L + + L LT + + L LL +S++++ED+D S DL A+
Sbjct: 243 LAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE 296
Score = 136 (52.9 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
GR+T SGLLN DG+ S +E +I+ TTNH D +DPALIR GR+D+ +G C
Sbjct: 305 GRLTFSGLLNALDGVAS--TEARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYC 356
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 192 (72.6 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 45/127 (35%), Positives = 75/127 (59%)
Query: 169 LFTNNGHGSYDSGWVSVPFRHPSTFETLA---LEPQLKKQITEDLTAFANGKEFYHRVGR 225
++ N G+G+++ F +P + +L+ L LK ++ ED+ +F + +Y G
Sbjct: 165 IYINGGNGNWER------FGNPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGI 218
Query: 226 AWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELT-KVTDNSELRALLLQTTNRSIIV 284
++RGYLLYG PG+GKSSLI A+A L D+ + L+ K D+ ++ LL +SI++
Sbjct: 219 PYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILL 278
Query: 285 IEDIDCS 291
IEDID +
Sbjct: 279 IEDIDAA 285
Score = 97 (39.2 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
+T SGLLN DG+ S E +I+ TTN + +D ALIR GR+D+ + + L
Sbjct: 306 LTYSGLLNALDGVAS--QEGRILFMTTNKIELLDSALIREGRIDLKIKVSNATKSQAAQL 363
Query: 403 AKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVS 454
++ + + + L + L+ +QI LL+ + + A++EV S
Sbjct: 364 FTHFYNLPTDNQLAIRFSENLH-DHQLSMSQIQGFLLKYINSPEKAIEEVQS 414
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 82/291 (28%), Positives = 137/291 (47%)
Query: 109 FSGHSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERR 168
FS HS + + T+QD EE+ LKL QTL S LD + + EE S++
Sbjct: 136 FS-HSAP-SRTITTLQDGAEER--IHLKL-----QTL-SLSLDPLRALIEEANAYSKKLA 185
Query: 169 LFTNNGHGSYDS-----GWVSVPFRHPSTFETLALEPQLKKQITEDLTAFA--NGKEFYH 221
+ + + + W + R T+ L+ KK + +D+ + + +++Y
Sbjct: 186 KSQISVYRAMSNVRDLVRWNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYA 245
Query: 222 RVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELT--KVTDNSELRALLLQTTN 279
G ++RGYL GPPG+GK+SL +A+A D+Y L L ++++ LR L +
Sbjct: 246 NHGIPYRRGYLFSGPPGTGKTSLSSALAGVFGLDIYVLSLLDPNISESHFLR-LFSEVPT 304
Query: 280 RSIIVIEDIDCSVDLTADRMLXX-XXXXXXXXXXXXXXXXEMGSRIASSTCGXXXXXXGE 338
+ ++++EDID + +T R G+ + +S
Sbjct: 305 QCVVLLEDIDAA-GMTLKRANEEPVTADTTASFDVMKKRARPGAPVPTSP---------- 353
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHV 389
++LS LLN DG+ S E +I++ TTN +DPALIR GR+D+H+
Sbjct: 354 -PTPISLSALLNAIDGVSS--QEGRILIMTTNAPQDLDPALIRPGRVDMHI 401
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 199 (75.1 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKV 401
+V+LSGLL F DGLWS EE+II+FTTNH++ +DPA +R G+MDVH+ + C P FK
Sbjct: 26 QVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMDVHILMDYCTPVVFKK 85
Query: 402 LAKNYLGI 409
L YL I
Sbjct: 86 LDALYLDI 93
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 221 (82.9 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 67/228 (29%), Positives = 109/228 (47%)
Query: 175 HGSYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGK--EFYHRVGRAWKRGYL 232
HG + W SV R T+ L+ + K + D+ + + +Y G +RGYL
Sbjct: 266 HGRHS--WTSVANRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRRGYL 323
Query: 233 LYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSE-LRALLLQTTNRSIIVIEDIDCS 291
+GPPG+GK+SL A+A D+Y + L + + E L L R ++++EDID +
Sbjct: 324 FHGPPGTGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCLPRRCVVLLEDIDTA 383
Query: 292 -VDLTADRMLXXXXXXXXXXXXXXXXXXEMGSR--------IASSTCGXXXXXXGEESGR 342
+ T +++ S +A + G GE+ G
Sbjct: 384 GLTRTEEKIGHSVRTNTKTTTTTGSNATSPPSGPNEWKVTDLARALKGGRGSD-GEQKG- 441
Query: 343 VTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVS 390
++LSGLLN DG+ S E ++++ TTN +S+D ALIR GR+D+ V+
Sbjct: 442 ISLSGLLNAIDGVAS--HEGRVLIMTTNRPESLDDALIRPGRVDLQVA 487
Score = 42 (19.8 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 427 GALTPAQIGEVLLRNRGNVDLAMKEVVSAMQAKI 460
G L+PA+I LL+ R A+++V ++A +
Sbjct: 564 GQLSPAEIQGFLLKRRKWPRKALRDVEGWVKAMV 597
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 216 (81.1 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 65/220 (29%), Positives = 104/220 (47%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ L L + I D+ F N ++Y G ++R YLL+GPPG GKS
Sbjct: 206 PFGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKS 265
Query: 243 SLIAAMANYLCYDVYDLELTKV--TDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRML 300
SLI A+A Y +++ + + + TD+ + LL ++I+++EDID + + M
Sbjct: 266 SLITALAGYFDFNICTININDIYLTDDRFIH-LLATIPPKTILILEDIDF-IFINDPIMK 323
Query: 301 XXXXXXXXXXXXXXXXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCS 360
S I T G V+ SGLLN DG+ +
Sbjct: 324 YTNNDQNSSSNSSIFTGTNNHSTI--KTLG------------VSYSGLLNALDGI--VAT 367
Query: 361 EEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
EE+II TTN+ + + P LIR GR+D+ + + + +K
Sbjct: 368 EERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYK 407
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 216 (81.1 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 65/220 (29%), Positives = 104/220 (47%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ L L + I D+ F N ++Y G ++R YLL+GPPG GKS
Sbjct: 206 PFGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKS 265
Query: 243 SLIAAMANYLCYDVYDLELTKV--TDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRML 300
SLI A+A Y +++ + + + TD+ + LL ++I+++EDID + + M
Sbjct: 266 SLITALAGYFDFNICTININDIYLTDDRFIH-LLATIPPKTILILEDIDF-IFINDPIMK 323
Query: 301 XXXXXXXXXXXXXXXXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCS 360
S I T G V+ SGLLN DG+ +
Sbjct: 324 YTNNDQNSSSNSSIFTGTNNHSTI--KTLG------------VSYSGLLNALDGI--VAT 367
Query: 361 EEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
EE+II TTN+ + + P LIR GR+D+ + + + +K
Sbjct: 368 EERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYK 407
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 134 (52.2 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 227 WKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVI 285
++RGYLLYGPPG GKSS I A+A L + + L LT + + L LL +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 286 EDIDCS 291
ED+D +
Sbjct: 64 EDVDAA 69
Score = 81 (33.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRD 373
GR+T SGLLN DG+ S +E +I+ TTNH D
Sbjct: 87 GRLTFSGLLNALDGVAS--TEARIVFMTTNHVD 117
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 214 (80.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/272 (26%), Positives = 118/272 (43%)
Query: 126 SVEEKRSFTLKL----PKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSG 181
++ EK +F + P+ +Q L A H ++ + R L H D
Sbjct: 202 TIREKETFIISTFGLSPEPIKQFLAHARKHHHKDHGDK-TLIMRPNSLPQRRFH---DRA 257
Query: 182 WVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKE--FYHRVGRAWKRGYLLYGPPGS 239
W V R T+ L+ + K + D+ + K +Y G +RGYL +GPPG+
Sbjct: 258 WREVAKRPVRPISTVVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGT 317
Query: 240 GKSSLIAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDCSVDLTADR 298
GK+SL A+A ++Y + L + + +L L R I+++EDID TA
Sbjct: 318 GKTSLSFALAGVFGLEIYVISLIEPQLSDEDLSTLFNGLPRRCIVLLEDID-----TAG- 371
Query: 299 MLXXXXXXXXXXXXXXXXXXEMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSC 358
M ++ + G G++ +++SGLLN DG+
Sbjct: 372 MSRAEGEIRTETKTEGPSEWKVADLARALKVGRGH---GDDQKGISMSGLLNVIDGV--A 426
Query: 359 CSEEKIIVFTTNHRDSVDPALIRCGRMDVHVS 390
E +I + TTN + +D ALIR GR+D+ V+
Sbjct: 427 AHEGRIFIMTTNKPEILDEALIRSGRVDLQVA 458
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 153 (58.9 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 341 GRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFK 400
GR+T SGLLN DG+ S +E +I+ TTNH D +DPALIR GR+D+ +G C
Sbjct: 87 GRLTFSGLLNALDGVAS--TEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLT 144
Query: 401 VLAKNYLGIESHHALFDVVESCIRAGGALTPAQI 434
+ + + ++ + E +RA ++PAQ+
Sbjct: 145 QMFQRFYPGQAPSLAENFAEHVLRATNQISPAQV 178
Score = 48 (22.0 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 245 IAAMANYLCYDVYDLELTKVT-DNSELRALLLQTTNRSIIVIEDIDCS 291
+ ++A L + + L LT + + L LL +S++++ED+D +
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 69
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 175 (66.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 48/170 (28%), Positives = 78/170 (45%)
Query: 50 EFNGYCG--VDVNDLYRHVNLYLNSVNPAGXXXXXXXXXXXXXXXXXXXFTVAPNHTVHD 107
+FN Y G ++ ++ + ++ YL++ + A ++ + TV D
Sbjct: 48 KFNEYSGEGLEKSEAFDTIHNYLSTKSTA---LGNRLKANESKKSKSLVLSLDDHETVED 104
Query: 108 SFSGHSLSWTHHV-------DTVQDS-VEEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEE 159
F G + W+ V T +D E+R TL RHR+ + + YLDHV +E
Sbjct: 105 VFQGVKVKWSSSVRENQNQSSTNRDKGFAERRYLTLSFHSRHREMITTTYLDHVLREGKE 164
Query: 160 FERVSRERRLFTNNGHGSYDS-----GWVSVPFRHPSTFETLALEPQLKK 204
RER+L+TNN + S W +V F HP+T ET A++P+ K
Sbjct: 165 IGLKKRERKLYTNNSSHEWISWRLGTNWSNVSFDHPATLETFAMDPEKNK 214
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ L+ L +I D+ F + ++Y G ++RGYLLYGPPG GKS
Sbjct: 58 PFGYPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKS 117
Query: 243 SLIAAMANYLCYDVYDLELT 262
S I A+A L + + L LT
Sbjct: 118 SFITALAGELEHSICLLSLT 137
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 102 (41.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST++ + L+ Q+K +I E + E + +G A +G +LYGPPG+GK+ L A+A
Sbjct: 141 STYDMVGGLDKQIK-EIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 247
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG S S++ I+ TN D +DPAL+R GR+D
Sbjct: 260 GDSEVQRTMLELLNQLDGFES--SKDIKIIMATNRLDILDPALLRPGRID 307
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 95 (38.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A +G V
Sbjct: 314 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLGNV 346
Score = 90 (36.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 138 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 191
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 192 DCNFLKVVSSS 202
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 96 (38.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
GE+ + TL LLN DG S + KII+ TN DS+DPALIR GR+D + L
Sbjct: 299 GEQEVQRTLLELLNQLDGFESR-GDVKIIM-ATNRIDSLDPALIRPGRIDRKIEL 351
Score = 88 (36.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
TF+ + E Q++ ++ E + E+Y +G +G +LYG PG+GK+ L A+AN
Sbjct: 181 TFDDIGGCESQIQ-ELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVAN 239
Query: 251 -----YLCYDVYDLELTKVTDNSELRALLLQTTNR---SIIVIEDID 289
++ DL + + + L + Q SI+ I++ID
Sbjct: 240 STSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEID 286
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 106 (42.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 145 STYEMVGGLDKQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID 251
Score = 76 (31.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +DPAL+R GR+D
Sbjct: 264 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDPALLRPGRID 311
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 105 (42.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + LE Q+K +I E + E + +G +G LLYGPPG+GK+ L A+A
Sbjct: 142 STYEMVGGLEKQIK-EIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 201 HHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 248
Score = 76 (31.8 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +DPAL+R GR+D
Sbjct: 262 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDPALLRPGRID 309
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 104 (41.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST++ + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 142 STYDMVGGLDKQIK-EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 200
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 201 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEID 248
Score = 77 (32.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 327 STCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
S+ G G+ + T+ LLN DG S K+++ TN D +DPAL+R GR+D
Sbjct: 252 SSRGESGSGGGDSEVQRTMLELLNQLDGFEST-KNIKVLM-CTNRIDILDPALLRPGRID 309
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST++ + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 129 STYDMIGGLDQQIK-EIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 188 HHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 235
Score = 75 (31.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + KII+ TN D +DPAL+R GR+D
Sbjct: 248 GDSEVQRTMLELLNQLDG-FEPTKNIKIIM-ATNRLDILDPALLRPGRID 295
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 95 (38.5 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
K++I E + + Y ++G RG LLYGPPG+GK+ L+ A+AN
Sbjct: 175 KQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Score = 85 (35.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHA 398
E R+ L LLN DG + S K+I+ TN D++DPAL+R GR+D + +
Sbjct: 285 EVQRILLE-LLNQMDG-FEQTSNVKVIM-ATNRADTLDPALLRPGRLDRKIEFPSLRDRR 341
Query: 399 FKVLAKNYLGIE-SHHALFDVVESCIR---AGGALTPAQIGEVLLR--NRGNVDLAMKEV 452
+ L + + + S D+ +R GA+ A + E LR + ++ ++
Sbjct: 342 ERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIQSDL 401
Query: 453 VSAMQAKILSGRE 465
A A++ +G+E
Sbjct: 402 EDAYSAQVKTGQE 414
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 92 (37.4 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
GE RV +S LL DG+ S + +++ TN ++S+DPAL R GR D + +G
Sbjct: 321 GEVERRV-VSQLLTLMDGIKS--RGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDD 377
Query: 397 HA-FKVL 402
+ F++L
Sbjct: 378 NGRFEIL 384
Score = 82 (33.9 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 229 RGYLLYGPPGSGKSSLIAAMANY---LCYDVYDLE-LTKVTDNSE--LRALLLQTTNRS- 281
RG LLYGPPGSGK+ + A+AN + + E ++K+ +E LR + S
Sbjct: 242 RGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSP 301
Query: 282 -IIVIEDID 289
II I++ID
Sbjct: 302 AIIFIDEID 310
Score = 55 (24.4 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 183 VSVPFRHPSTFETLALEP 200
+ +P RHP F+TL ++P
Sbjct: 223 IELPLRHPGLFKTLGVKP 240
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 92 (37.4 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
GE RV +S LL DG+ S + +++ TN ++S+DPAL R GR D + +G
Sbjct: 321 GEVERRV-VSQLLTLMDGIKS--RGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDD 377
Query: 397 HA-FKVL 402
+ F++L
Sbjct: 378 NGRFEIL 384
Score = 82 (33.9 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 229 RGYLLYGPPGSGKSSLIAAMANY---LCYDVYDLE-LTKVTDNSE--LRALLLQTTNRS- 281
RG LLYGPPGSGK+ + A+AN + + E ++K+ +E LR + S
Sbjct: 242 RGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSP 301
Query: 282 -IIVIEDID 289
II I++ID
Sbjct: 302 AIIFIDEID 310
Score = 55 (24.4 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 183 VSVPFRHPSTFETLALEP 200
+ +P RHP F+TL ++P
Sbjct: 223 IELPLRHPGLFKTLGVKP 240
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 96 (38.9 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 45/177 (25%), Positives = 80/177 (45%)
Query: 125 DSVEEKRSFTLKLPKRHRQTL-LSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWV 183
DS + + LK R L + +D T + + V+++ L + YDS
Sbjct: 98 DSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVK 157
Query: 184 SVPFRHPST--FETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSG 240
++ T + + LE Q++ ++ E + KE + ++G +G LLYGPPG+G
Sbjct: 158 AMEVDEKPTEDYNDIGGLEKQIQ-ELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTG 216
Query: 241 KSSLI---AAMANYLCYDVYDLELTK--VTDNSEL-RALLLQTTNRS--IIVIEDID 289
K+ + AA N + +L + + D ++L R L +S II I++ID
Sbjct: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEID 273
Score = 83 (34.3 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKI-IVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG S+++I ++ TN D +DPAL+R GR+D
Sbjct: 286 GDREVQRTMLELLNQLDGF---SSDDRIKVIAATNRADILDPALMRSGRLD 333
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 96 (38.9 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 29/95 (30%), Positives = 45/95 (47%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + + KII+ TN D++DPAL+R GR+D + +G +
Sbjct: 295 TLMELLNQMDG-FDTLGQTKIIM-ATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIF 352
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEVL 438
K + + FD E+ ++ A I V+
Sbjct: 353 KIHTSKVAKQGEFDF-EAAVKMSDGFNGADIRNVV 386
Score = 83 (34.3 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 204 KQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
+++ E + E + RVG +G LLYGPPG+GK+ L A+A
Sbjct: 182 RELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 100 (40.3 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST++ + L Q+K +I E + E + +G A +G +LYGPPG+GK+ L A+A
Sbjct: 145 STYDMVGGLTKQIK-EIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 204 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 251
Score = 78 (32.5 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + S+ I+ TN D +DPAL+R GR+D
Sbjct: 264 GDSEVQRTMLELLNQLDGFET--SKNIKIIMATNRLDILDPALLRPGRID 311
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 105 (42.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 155 SRAEEFERVSRERRL-FTNNGHGSYD-SGWVSVPFRHPSTFETLA-LEPQLKKQITEDLT 211
S + F +S + R+ FT N S D + + V T++ + L QLK +I E +
Sbjct: 309 SNTDTFYFISSKTRVSFTKNRTNSKDQANQLKV------TYDMIGGLNSQLK-EIREIIE 361
Query: 212 AFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE----LTKVTDN 267
E + G RG LLYGPPG+GK+ + A+AN + V + ++K
Sbjct: 362 LPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGE 421
Query: 268 SE--LRALLLQTTNR--SIIVIEDID 289
+E LR + + T R SII I+++D
Sbjct: 422 TEARLRQIFAEATLRHPSIIFIDELD 447
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/71 (35%), Positives = 34/71 (47%)
Query: 329 CGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDV 387
C E RV S LL DG+ S SE +++V TN ++D AL R GR D
Sbjct: 450 CPKREGAQNEVEKRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDK 508
Query: 388 HVSLGTCGPHA 398
+ +G P+A
Sbjct: 509 EIEIGV--PNA 517
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 90 (36.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
LE Q++ +I E + E Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 198 LESQIQ-EIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
Score = 89 (36.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
GE + T+ LLN DG S + K+I+ TN DS+DPALIR GR+D + L
Sbjct: 309 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 90 (36.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
LE Q++ +I E + E Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 198 LESQIQ-EIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
Score = 89 (36.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
GE + T+ LLN DG S + K+I+ TN DS+DPALIR GR+D + L
Sbjct: 309 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 130 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 183
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 184 DCNFLKVVSSS 194
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 248 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 305
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 306 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 338
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 100 (40.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 193 FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
FE + K++ + L + E YH +G RG LL+GPPG GK+ L A+A L
Sbjct: 158 FEDVGGNDMTLKEVCKMLIHMRH-PEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 216
Query: 253 CYDVYDL---ELTK-VTDNSE--LRALLLQTTNRS--IIVIEDID 289
+ + E+ V+ SE LR L Q + + II I++ID
Sbjct: 217 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 261
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D + LG
Sbjct: 276 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 327
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 138 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 191
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 192 DCNFLKVVSSS 202
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 314 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 346
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 138 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 191
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 192 DCNFLKVVSSS 202
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 314 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 346
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 138 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 191
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 192 DCNFLKVVSSS 202
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 314 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 346
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 138 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 191
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 192 DCNFLKVVSSS 202
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 314 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 346
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 138 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 191
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 192 DCNFLKVVSSS 202
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 314 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 346
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 90 (36.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 144 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 197
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 198 DCNFLKVVSSS 208
Score = 87 (35.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 262 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 319
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 320 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 352
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 152 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 205
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 206 DCNFLKVVSSS 216
Score = 87 (35.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 270 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 327
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 328 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 360
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 152 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 205
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 206 DCNFLKVVSSS 216
Score = 87 (35.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 270 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 327
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 328 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 360
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 152 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 205
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 206 DCNFLKVVSSS 216
Score = 87 (35.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG + K+I+ TN D++DPAL+R GR+D + + A +
Sbjct: 270 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 327
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + G + H D E+ ++ A + V
Sbjct: 328 KIHAGPITKHGEIDY-EAIVKLSDGFNGADLRNV 360
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
K++I E + + Y ++G RG LLYGPPG+GK+ L+ A+AN
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 80 (33.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + S K+I+ TN D++DPAL+R GR+D
Sbjct: 274 EVQRILLE-LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
K++I E + + Y ++G RG LLYGPPG+GK+ L+ A+AN
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 80 (33.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + S K+I+ TN D++DPAL+R GR+D
Sbjct: 274 EVQRILLE-LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
G + TL+ LL DG + +E II+ TN +D +DPAL+R GR D +V++G
Sbjct: 271 GNDEREQTLNQLLVEMDGFEA--NEGVIILAATNRKDVLDPALLRPGRFDRNVTVG 324
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
TF+ +A + K+++ E++ F + + R+G +G LL GPPG+GK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIA 210
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
G + TL+ LL DG + +E II+ TN +D +DPAL+R GR D +V++G
Sbjct: 271 GNDEREQTLNQLLVEMDGFEA--NEGVIILAATNRKDVLDPALLRPGRFDRNVTVG 324
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
TF+ +A + K+++ E++ F + + R+G +G LL GPPG+GK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIA 210
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 102 (41.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDN----SE--LR 271
E YH +G RG LL+GPPG GK+ L A+A L + + T+V SE LR
Sbjct: 282 EVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLR 341
Query: 272 ALLLQTTNRS--IIVIEDID 289
L Q + + ++ I++ID
Sbjct: 342 ELFEQAVSNAPCVLFIDEID 361
Score = 81 (33.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D + LG
Sbjct: 376 RRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 427
Score = 73 (30.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 340 SGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
S RV ++ LL DGL + ++ I+ TN D +DPA++R GR+D + +G P
Sbjct: 692 SVRV-VNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 745
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 102 (41.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDN----SE--LR 271
E YH +G RG LL+GPPG GK+ L A+A L + + T+V SE LR
Sbjct: 282 EVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLR 341
Query: 272 ALLLQTTNRS--IIVIEDID 289
L Q + + ++ I++ID
Sbjct: 342 ELFEQAVSNAPCVLFIDEID 361
Score = 81 (33.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D + LG
Sbjct: 376 RRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 427
Score = 73 (30.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 340 SGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
S RV ++ LL DGL + ++ I+ TN D +DPA++R GR+D + +G P
Sbjct: 697 SVRV-VNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVY 257
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 138 LSEQIR-ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL----- 191
Query: 258 DLELTKVTDNS 268
D KV +S
Sbjct: 192 DCNFLKVVSSS 202
Score = 85 (35.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD--VHVSL 391
TL LLN DG + K+I+ TN D++DPAL+R GR+D +H+ L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIM-ATNRPDTLDPALLRPGRLDRKIHIEL 303
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 99 (39.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LL+GPPG+GK+ L A+A
Sbjct: 156 STYEMVGGLDKQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA 214
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 215 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 262
Score = 76 (31.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +DPAL+R GR+D
Sbjct: 275 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDPALLRPGRID 322
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 49/179 (27%), Positives = 78/179 (43%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLI-AAMANYLC--YDVYDLELTK--VTDNSELRA 272
E + R+G + RG LLYGPPG K++L+ AA ++ C + + EL V D+ + A
Sbjct: 476 EAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLA 535
Query: 273 LLLQTTNR---SIIVIEDIDCSVDLTADRMLXXXXXXXXXXXXXXXXXXEMGSRIAS--S 327
L SI+ ++++D V D +G R S
Sbjct: 536 QLFAQARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVRTLERRS 595
Query: 328 TCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
TC G + V L + L C+++ +IV TN +++D AL+R GR+D
Sbjct: 596 TCRKIALLEGGDQEDVRLHQM-----ELQEVCNKDVLIVAATNRPEALDSALLRPGRLD 649
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 100 (40.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 193 FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
FE + K++ + L + E YH +G RG LL+GPPG GK+ L A+A L
Sbjct: 147 FEDVGGNDMTLKEVCKMLIHMRH-PEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 205
Query: 253 CYDVYDL---ELTK-VTDNSE--LRALLLQTTNRS--IIVIEDID 289
+ + E+ V+ SE LR L Q + + II I++ID
Sbjct: 206 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 250
Score = 81 (33.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D + LG
Sbjct: 265 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 316
Score = 73 (30.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 340 SGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
S RV ++ LL DGL + ++ I+ TN D +DPA++R GR+D + +G P
Sbjct: 581 SVRV-VNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 634
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 92 (37.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG S + K+I+ TN D++DPAL+R GR+D + +G + +
Sbjct: 273 TLMELLNQLDGFDSL-GKVKVIM-ATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEIL 330
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + + H D E+ ++ + A + V
Sbjct: 331 KIHSNKITKHGEIDF-EAVVKLSDGFSAADLRNV 363
Score = 83 (34.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
E + RVG +G LL+GPPG+GK+ L A+A+ L
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 92 (37.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
TL LLN DG S + K+I+ TN D++DPAL+R GR+D + +G + +
Sbjct: 273 TLMELLNQLDGFDSL-GKVKVIM-ATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEIL 330
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
K + + H D E+ ++ + A + V
Sbjct: 331 KIHSNKITKHGEIDF-EAVVKLSDGFSAADLRNV 363
Score = 83 (34.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
E + RVG +G LL+GPPG+GK+ L A+A+ L
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 89 (36.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHA-FKVL 402
TL LLN DG S + K+I+ TN DS+DPAL+R GR+D + + A ++L
Sbjct: 264 TLMELLNQMDGFDSL-GQVKMIM-ATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEIL 321
Query: 403 AKNYLGIESH 412
+ L I H
Sbjct: 322 KIHALKIAKH 331
Score = 85 (35.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 165 ELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQL 199
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 87 (35.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
TL LLN DG + + KII+ TN D++DPAL+R GR+D + +
Sbjct: 260 TLMELLNQLDG-FDYLGKTKIIM-ATNRPDTLDPALLRAGRLDRKIEI 305
Score = 87 (35.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+
Sbjct: 142 LNDQIR-ELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 265 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 265 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 265 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 312
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 265 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 312
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 265 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 312
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 265 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 312
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 265 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 312
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 152 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 210
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 211 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 258
Score = 68 (29.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 271 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 318
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 154 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 260
Score = 68 (29.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 273 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 320
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 154 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 260
Score = 68 (29.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 273 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 320
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 100 (40.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 193 FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
FE + K++ + L + E YH +G RG LL+GPPG GK+ L A+A L
Sbjct: 263 FEDVGGNDTTLKEVCKMLVHMRH-PEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGEL 321
Query: 253 CYDVYDLELTK----VTDNSE--LRALLLQTTNRS--IIVIEDID 289
+ + T+ V+ SE LR L Q + + I+ I++ID
Sbjct: 322 DLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEID 366
Score = 81 (33.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D + LG
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 432
Score = 73 (30.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 340 SGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
S RV ++ LL DGL + ++ I+ TN D +DPA++R GR+D + +G P
Sbjct: 697 SVRV-VNQLLTEMDGLET--RQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 100 (40.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 193 FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
FE + K++ + L + E YH +G RG LL+GPPG GK+ L A+A L
Sbjct: 264 FEDVGGNDMTLKEVCKMLIHMRH-PEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 322
Query: 253 CYDVYDL---ELTK-VTDNSE--LRALLLQTTNRS--IIVIEDID 289
+ + E+ V+ SE LR L Q + + II I++ID
Sbjct: 323 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 367
Score = 81 (33.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D + LG
Sbjct: 382 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 433
Score = 73 (30.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 340 SGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
S RV ++ LL DGL + ++ I+ TN D +DPA++R GR+D + +G P
Sbjct: 698 SVRV-VNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 751
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 101 (40.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 35/107 (32%), Positives = 56/107 (52%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T++ + L QLK +I E + E + G + RG LLYGPPG+GK+ + A+AN
Sbjct: 345 TYDMIGGLNSQLK-EIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 251 YLCYDVYDLE----LTKVTDNSE--LRALLLQTTNR--SIIVIEDID 289
+ V + ++K +E LR + + T R SII I+++D
Sbjct: 404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELD 450
Score = 79 (32.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 25/71 (35%), Positives = 34/71 (47%)
Query: 329 CGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDV 387
C E RV S LL DG+ S SE +++V TN ++D AL R GR D
Sbjct: 453 CPKREGAQNEVEKRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDK 511
Query: 388 HVSLGTCGPHA 398
+ +G P+A
Sbjct: 512 EIEIGV--PNA 520
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G + TL+ LL DG S +E II+ TN D +DPAL+R GR D H+ + T
Sbjct: 273 GHDEREQTLNQLLVEMDGFNS--NEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDI 330
Query: 397 HAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAM 456
+ K + K ++ L D V+ + A TP G L N N + A+ + +
Sbjct: 331 NGRKEILKVHV---KGKPLGDDVDLDVLA--RRTPGFTGADLA-NMVN-EAAL--LAARR 381
Query: 457 QAKILSGREVMECDELVI 474
K+++ E+ E E VI
Sbjct: 382 NKKVINMEEMEEAIERVI 399
Score = 85 (35.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
TF +A ++K+++ E + F Y+ +G +G LL+G PG+GK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 252 LCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDID 289
+ + E+ S +R L Q + I+ I++ID
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G + TL+ LL DG S +E II+ TN D +DPAL+R GR D H+ + T
Sbjct: 273 GHDEREQTLNQLLVEMDGFNS--NEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDI 330
Query: 397 HAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVSAM 456
+ K + K ++ L D V+ + A TP G L N N + A+ + +
Sbjct: 331 NGRKEILKVHV---KGKPLGDDVDLDVLA--RRTPGFTGADLA-NMVN-EAAL--LAARR 381
Query: 457 QAKILSGREVMECDELVI 474
K+++ E+ E E VI
Sbjct: 382 NKKVINMEEMEEAIERVI 399
Score = 85 (35.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
TF +A ++K+++ E + F Y+ +G +G LL+G PG+GK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 252 LCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDID 289
+ + E+ S +R L Q + I+ I++ID
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 92 (37.4 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 120 VDTVQDSVEEKRSFTLKLPKRHRQTLLSAY---LDHVTSRAEEFERVSRERRLFTNNGHG 176
+D V D E + S + + RQT+ AY +D R + ++++ + +
Sbjct: 90 IDMVLDG-ETQPSKCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPP 148
Query: 177 SYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLL 233
YDS ++ T E + L KQI E + A KE + +G +G L+
Sbjct: 149 EYDSRVKAMEIDEKPTEEYSDIGG-LDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLM 207
Query: 234 YGPPGSGKSSLIAAMA 249
YGPPG+GK+ L A A
Sbjct: 208 YGPPGTGKTLLARACA 223
Score = 81 (33.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGT--- 393
G+ + T+ LLN DG +S + K+I TN D +DPAL+R GR+D +
Sbjct: 284 GDREVQRTMLELLNQLDG-FSSDANIKVIA-ATNRIDILDPALLRSGRLDRKIEFPLPNE 341
Query: 394 -CGPHAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPA---QIGEVLLRNRGNVDLAM 449
H ++ ++ + + + ++ S GA A + G + LR RG +L
Sbjct: 342 EARAHILQIHSRK-MNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALR-RGGTELIH 399
Query: 450 KEVVSAMQAKILSGREVME 468
+ V + ++ +E
Sbjct: 400 NDFVEGCVEVMAKKKKTLE 418
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 93 (37.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHV 389
G + TL+ LL+ DG S +E I++ TN D +DPAL+R GR D HV
Sbjct: 290 GHDEREQTLNQLLSEMDGFDS--HDEVIVMAATNRPDVLDPALLRPGRFDRHV 340
Score = 84 (34.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
TF+ +A K ++ E + + K+F R+G +G LL GPPG+GK+ L A+A
Sbjct: 173 TFDDVAGMENPKMELKEIVDYLRDPKKF-QRIGGKVPKGVLLVGPPGTGKTLLARAVA 229
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 104 (41.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST++ + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 158 STYDMIGGLDQQIK-EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Score = 68 (29.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+++ TN D +D AL+R GR+D
Sbjct: 278 GDSEVQRTMLELLNQLDG-FEASNKIKVLM-ATNRIDILDQALLRPGRID 325
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 104 (41.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST++ + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 158 STYDMIGGLDQQIK-EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Score = 68 (29.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+++ TN D +D AL+R GR+D
Sbjct: 278 GDSEVQRTMLELLNQLDG-FEASNKIKVLM-ATNRIDILDQALLRPGRID 325
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 98 (39.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K++I E + E Y ++G RG LLYGPPG+GK+ L A+AN+
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANH 212
Score = 74 (31.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 345 LSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 279 LMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLD 318
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 92 (37.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 117 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 175
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 176 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 215
Score = 79 (32.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 228 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 275
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 87 (35.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKI-IVFTTNHRDSVDPALIRCGRMDVHVSLGTCG 395
G+ + T+ LLN DG S+E+I ++ TN D +DPAL+R GR+D +
Sbjct: 287 GDREVQRTMLELLNQLDGF---SSDERIKVIAATNRADILDPALMRSGRLDRKIEF---- 339
Query: 396 PHAFKVLAKNYLGIES 411
PH + L I S
Sbjct: 340 PHPTEEARARILQIHS 355
Score = 86 (35.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 125 DSVEEKRSFTLKLPKRHRQTL-LSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWV 183
DS + + LK R L + +D + + + V+++ L + YDS
Sbjct: 99 DSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVK 158
Query: 184 SVPFRHPST--FETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSG 240
++ T + + LE Q++ ++ E + KE + ++G +G LLYGPPG+G
Sbjct: 159 AMEVDEKPTEDYNDIGGLEKQIQ-ELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTG 217
Query: 241 KSSLIAAMA 249
K+ + A A
Sbjct: 218 KTLMARACA 226
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 93 (37.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN-----YLCYDVYDLELTKVTDNSE--L 270
+ + +G +G LLYGPPGSGK+ + A+AN + C + ++ ++K+ SE L
Sbjct: 231 QLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGESESNL 289
Query: 271 RALLLQTTNR--SIIVIEDID 289
R + SII I++ID
Sbjct: 290 RKAFEEAEKNAPSIIFIDEID 310
Score = 86 (35.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
GE R+ +S LL DGL S I++ TN +S+DPAL R GR D + +G
Sbjct: 321 GEVERRI-VSQLLTLMDGLKS--RAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 373
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 93 (37.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN-----YLCYDVYDLELTKVTDNSE--L 270
+ + +G +G LLYGPPGSGK+ + A+AN + C + ++ ++K+ SE L
Sbjct: 231 QLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGESESNL 289
Query: 271 RALLLQTTNR--SIIVIEDID 289
R + SII I++ID
Sbjct: 290 RKAFEEAEKNAPSIIFIDEID 310
Score = 86 (35.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
GE R+ +S LL DGL S I++ TN +S+DPAL R GR D + +G
Sbjct: 321 GEVERRI-VSQLLTLMDGLKS--RAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 373
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 93 (37.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN-----YLCYDVYDLELTKVTDNSE--L 270
+ + +G +G LLYGPPGSGK+ + A+AN + C + ++ ++K+ SE L
Sbjct: 232 QLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI-MSKLAGESESNL 290
Query: 271 RALLLQTTNR--SIIVIEDID 289
R + SII I++ID
Sbjct: 291 RKAFEEAEKNAPSIIFIDEID 311
Score = 86 (35.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
GE R+ +S LL DGL S I++ TN +S+DPAL R GR D + +G
Sbjct: 322 GEVERRI-VSQLLTLMDGLKS--RAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 374
Score = 84 (34.6 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 202 LKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
+K+++ E + E + + G + +G L YGPPG GK+ L A+AN
Sbjct: 489 VKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Score = 74 (31.1 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 330 GXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G G + RV L+ LL DG+ + + I+ TN D +DPAL+R GR+D
Sbjct: 591 GNSVGDAGGAADRV-LNQLLTEMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLD 644
Score = 50 (22.7 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 183 VSVPFRHPSTFETLALEP 200
V +P RHP F+++ ++P
Sbjct: 224 VELPLRHPQLFKSIGVKP 241
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 99 (39.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 189 HPST-FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAA 247
HPS FE + + K+I + L + + + H +G RG+LL+GPPG GK+ L A
Sbjct: 254 HPSVKFEDVGGNDETLKEICKMLIHVRHPEVYLH-LGVVPPRGFLLHGPPGCGKTLLAQA 312
Query: 248 MANYLCYDVYDLELTK----VTDNSE--LRALLLQTTNRS--IIVIEDID 289
+A L + + T+ V+ SE LR L Q + ++ I++ID
Sbjct: 313 IAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEID 362
Score = 80 (33.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D + LG
Sbjct: 377 RRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLG 428
Score = 74 (31.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 339 ESG---RVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCG 395
ESG RV ++ LL DGL + ++ I+ TN D +DPA++R GR+D + +G
Sbjct: 694 ESGASVRV-VNQLLTEMDGLEN--RQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPP 750
Query: 396 P 396
P
Sbjct: 751 P 751
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 99 (39.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 35/107 (32%), Positives = 55/107 (51%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T++ + L QLK I E + E + G + RG LLYGPPG+GK+ + A+AN
Sbjct: 316 TYDMIGGLSSQLKT-IRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIAN 374
Query: 251 YLCYDVYDLE----LTKVTDNSE--LRALLLQTTNR--SIIVIEDID 289
+ V + ++K SE LR + + + R SII I+++D
Sbjct: 375 EVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELD 421
Score = 78 (32.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 329 CGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDV 387
C E RV S LL DG+ S SE +++V TN ++D AL R GR D
Sbjct: 424 CPKREGAQNEVEKRVVAS-LLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDK 482
Query: 388 HVSLG 392
+ +G
Sbjct: 483 EIEIG 487
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 91 (37.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 220 YHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTD 266
Y RVG +G LLYGPPG+GK+ L AMA+ + + + ++ + D
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVD 209
Score = 80 (33.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
TL LLN DG KII+ TN D +DPAL+R GR+D + +
Sbjct: 260 TLMELLNHLDGFEEL-GNVKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 91 (37.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 220 YHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTD 266
Y RVG +G LLYGPPG+GK+ L AMA+ + + + ++ + D
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVD 209
Score = 80 (33.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
TL LLN DG KII+ TN D +DPAL+R GR+D + +
Sbjct: 260 TLMELLNHLDGFEEL-GNVKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 104 (41.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 141 STYEMIGGLDKQIK-EIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 200 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 247
Score = 68 (29.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 259 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 306
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 93 (37.8 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
++K+++ E + + E + + G + RG L YGPPG+GK+ L A+AN
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Score = 86 (35.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
GE RV +S LL DG+ + +++ TN +S+DPAL R GR D V +G P
Sbjct: 339 GEVERRV-VSQLLTLMDGMKA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDP 395
Score = 82 (33.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY---LCYDVYDLEL-TKVTDNSE--LR 271
+ + +G RG L+YGPPG+GK+ + A+AN + + E+ +K+ SE LR
Sbjct: 249 QLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLR 308
Query: 272 ALLLQTTNRS--IIVIEDID 289
+ S II I++ID
Sbjct: 309 KAFEEAEKNSPAIIFIDEID 328
Score = 76 (31.8 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 45/158 (28%), Positives = 72/158 (45%)
Query: 319 EMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPA 378
E+ S IA S G G S RV ++ LL DG+ S + ++ TN + +D A
Sbjct: 600 ELDS-IAKSR-GGSVGDAGGASDRV-VNQLLTEMDGMTS--KKNVFVIGATNRPEQLDAA 654
Query: 379 LIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVL 438
L+R GR+D V + + + + K L + D+ + G + A +G V
Sbjct: 655 LVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHG-FSGADLGFVT 713
Query: 439 LRNRGNVDLAMKEVVSA----MQAKILSGREV-MECDE 471
R V LA+KE +SA + + +G +V ME +E
Sbjct: 714 QRA---VKLAIKESISAEIERQKQREAAGEDVKMEDEE 748
Score = 51 (23.0 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 183 VSVPFRHPSTFETLALEP 200
V +P RHP F+++ ++P
Sbjct: 241 VELPLRHPQLFKSIGIKP 258
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 93 (37.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 189 LDTQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 247
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 248 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Score = 79 (32.9 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 300 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 347
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 103 (41.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 172 STYEMVGGLDTQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + + + R L + SII +++ID
Sbjct: 231 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 278
Score = 68 (29.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 291 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDILDSALLRPGRID 338
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 102 (41.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
ST+E + Q K++ E + E + +G + +G LLYGPPG+GK+ L A+A+
Sbjct: 176 STYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAH 235
Query: 251 YL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
+ C V EL + + + S + R L + SII +++ID
Sbjct: 236 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 282
Score = 69 (29.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG S ++ ++ TN D +D AL+R GR+D
Sbjct: 294 GDSEVQRTMMELLNQLDGFES--TQNIKVIMCTNRIDILDEALLRPGRID 341
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 102 (41.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
ST+E + Q K++ E + E + +G + +G LLYGPPG+GK+ L A+A+
Sbjct: 176 STYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAH 235
Query: 251 YL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
+ C V EL + + + S + R L + SII +++ID
Sbjct: 236 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 282
Score = 69 (29.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG S ++ ++ TN D +D AL+R GR+D
Sbjct: 294 GDSEVQRTMMELLNQLDGFES--TQNIKVIMCTNRIDILDEALLRPGRID 341
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 100 (40.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
GE RV + LL DG+ + + + +++ TN +SVDPAL R GR D V +G
Sbjct: 360 GEVESRVVAT-LLTLMDGMGA--AGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDV 416
Query: 397 HA-FKVLAKNYLGIESHHALFD 417
A F +L K + + S + D
Sbjct: 417 DARFDILTKQFSRMSSDRHVLD 438
Score = 90 (36.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 345 LSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHA-FKVLA 403
L+ LLN DG+ + +IV TN D +D AL+R GR+D H+ +G +A ++L
Sbjct: 637 LTSLLNEIDGVEEL--KGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILK 694
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEV 452
K + + D+ E R G + A++ VLL + M+++
Sbjct: 695 KCTKKFNTEESGVDLHELADRTEG-YSGAEV--VLLCQEAGLAAIMEDL 740
Score = 83 (34.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 199 EPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA-----NYLC 253
+ +LK ++ E + E + R+G + +G LLYGPPG K+ A+A N+L
Sbjct: 521 QEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLA 580
Query: 254 YDVYDLELTKVTDNSE--LRALLLQTTNR--SIIVIEDIDCSVDLTADR 298
++ K SE +R + + + SII ++ID L+ DR
Sbjct: 581 VKGPEI-FNKYVGESERAIREIFRKARSAAPSIIFFDEIDA---LSPDR 625
Score = 77 (32.2 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 229 RGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDN--SELRALLLQTTNR------ 280
RG LL+GPPG+GK+ L+ +AN V + + E A L N
Sbjct: 280 RGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQP 339
Query: 281 SIIVIEDID 289
SII I++ID
Sbjct: 340 SIIFIDEID 348
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 188 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 246
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 247 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 286
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 299 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 346
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 189 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 247
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 248 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 300 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 347
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 96 (38.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 30/80 (37%), Positives = 43/80 (53%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDL---ELTK-VTDNSE--LR 271
E Y R+G RG+LL+GPPG GK+ L A+A + + EL V+ SE LR
Sbjct: 250 EVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLR 309
Query: 272 ALLLQTTNRS--IIVIEDID 289
L Q + + I+ I++ID
Sbjct: 310 ELFEQAISSAPCILFIDEID 329
Score = 81 (33.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L S +++V TN DS+DPAL R GR D + LG
Sbjct: 344 RRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLG 395
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 92 (37.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYGPPG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 97 (39.2 bits), Expect = 7.6e-05, Sum P(2) = 7.5e-05
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T++ + L QLK I E + E + G RG LLYGPPG+GK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKA-IREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 251 YLCYDVYDLE----LTKVTDNSE--LRALLLQTTNR--SIIVIEDID 289
+ V + ++K +E LR + + T R SII I+++D
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELD 456
Score = 81 (33.6 bits), Expect = 7.6e-05, Sum P(2) = 7.5e-05
Identities = 25/71 (35%), Positives = 34/71 (47%)
Query: 329 CGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDV 387
C E RV S LL DG+ S SE +++V TN ++D AL R GR D
Sbjct: 459 CPKREGAQNEVEKRVVAS-LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDK 517
Query: 388 HVSLGTCGPHA 398
+ +G P+A
Sbjct: 518 EIEIGV--PNA 526
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 85 (35.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
E + RVG +G LLYGPPG+GK+ L A+A+ L
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNL 195
Score = 85 (35.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
TL LLN DG + S+ KII+ TN D +DPAL+R GR+D + +
Sbjct: 260 TLMELLNQMDG-FDTLSKVKIIM-ATNRPDVLDPALLRPGRLDRKIEI 305
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 95 (38.5 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 27/69 (39%), Positives = 34/69 (49%)
Query: 324 IASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCG 383
IAS C GE R+ +S LL DGL I++ TN +S+DPAL R G
Sbjct: 309 IASDDCFPSPQTHGEVERRI-VSQLLTLMDGLKQ--RAHVIVMAATNRPNSIDPALRRFG 365
Query: 384 RMDVHVSLG 392
R D V +G
Sbjct: 366 RFDREVDIG 374
Score = 82 (33.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 220 YHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY---LCYDVYDLEL-TKVTDNSE--LRAL 273
+ +G RG LLYGPPG+GK+ + A+AN + + E+ +K+ SE LR
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 289
Query: 274 LLQTTNRS--IIVIEDID 289
+T + II I+++D
Sbjct: 290 FEETEKNAPAIIFIDELD 307
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 87 (35.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G+ + T+ LLN DG +S K+I TN D++DPAL+R GR+D + L P
Sbjct: 302 GDREVQRTMLELLNQLDG-FSTDDTVKVIA-ATNRPDTLDPALLRSGRLDRKIEL----P 355
Query: 397 HAFKVLAKNYLGIESH--HALFDV-VESCIRAGGALTPAQI-------GEVLLRNRGNVD 446
H + L I S + DV E R+ AQ+ G + LR RG +
Sbjct: 356 HPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALR-RGATE 414
Query: 447 LAMKEVVSAMQAKILSGRE 465
+ ++ V + + +LS ++
Sbjct: 415 IDHEDFVEGITS-VLSKKK 432
Score = 84 (34.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 33/145 (22%), Positives = 69/145 (47%)
Query: 112 HSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQTL---LSAYLDHVTSRAEEFERVSRERR 168
++L +H + +D +EKR + + RQT+ + +D + + V+++
Sbjct: 101 NNLKLSH--EGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSY 158
Query: 169 LFTNNGHGSYDSGWVSVP-FRHPST-FETLA-LEPQLKKQITEDLTAFANGKEFYHRVGR 225
L + YD+ ++ PS + + L+ Q++ + E + KE + ++G
Sbjct: 159 LIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIE-DLVEAIVLPMLHKEKFEKIGI 217
Query: 226 AWKRGYLLYGPPGSGKSSLIAAMAN 250
+G L++GPPG+GK+ L A A+
Sbjct: 218 KPPKGVLMHGPPGTGKTLLARACAS 242
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 87 (35.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G+ + T+ LLN DG +S K+I TN D++DPAL+R GR+D + L P
Sbjct: 302 GDREVQRTMLELLNQLDG-FSTDDTVKVIA-ATNRPDTLDPALLRSGRLDRKIEL----P 355
Query: 397 HAFKVLAKNYLGIESH--HALFDV-VESCIRAGGALTPAQI-------GEVLLRNRGNVD 446
H + L I S + DV E R+ AQ+ G + LR RG +
Sbjct: 356 HPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALR-RGATE 414
Query: 447 LAMKEVVSAMQAKILSGRE 465
+ ++ V + + +LS ++
Sbjct: 415 IDHEDFVEGITS-VLSKKK 432
Score = 84 (34.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 33/145 (22%), Positives = 69/145 (47%)
Query: 112 HSLSWTHHVDTVQDSVEEKRSFTLKLPKRHRQTL---LSAYLDHVTSRAEEFERVSRERR 168
++L +H + +D +EKR + + RQT+ + +D + + V+++
Sbjct: 101 NNLKLSH--EGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSY 158
Query: 169 LFTNNGHGSYDSGWVSVP-FRHPST-FETLA-LEPQLKKQITEDLTAFANGKEFYHRVGR 225
L + YD+ ++ PS + + L+ Q++ + E + KE + ++G
Sbjct: 159 LIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIE-DLVEAIVLPMLHKEKFEKIGI 217
Query: 226 AWKRGYLLYGPPGSGKSSLIAAMAN 250
+G L++GPPG+GK+ L A A+
Sbjct: 218 KPPKGVLMHGPPGTGKTLLARACAS 242
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 109 (43.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 183 VSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
VS F+ P FE +A + K ++ E + F +E YH +G +G LL GPPGSGK+
Sbjct: 139 VSPHFK-PIRFEEIAGIDESKLELLE-VVDFIKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 243 SLIAAMA 249
L A+A
Sbjct: 197 MLARAVA 203
Score = 68 (29.0 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD--VHVSLGTC 394
G+ TL+ LL DG + + +++ TN D++D AL+R GR D V+V L
Sbjct: 266 GQREHDQTLNQLLVEMDGFSN--TVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDI 323
Query: 395 GPHAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEV-----LLRNRGNVDLA- 448
K+L I+S L D+ E R + A + V +L R N L
Sbjct: 324 NGRK-KILEIYIKKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRNNKSLVT 381
Query: 449 MKEVVSAMQAKILSGRE 465
+ E+ A K+ G E
Sbjct: 382 INELYEARD-KVSMGPE 397
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 109 (43.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 183 VSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
VS F+ P FE +A + K ++ E + F +E YH +G +G LL GPPGSGK+
Sbjct: 139 VSPHFK-PIRFEEIAGIDESKLELLE-VVDFIKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 243 SLIAAMA 249
L A+A
Sbjct: 197 MLARAVA 203
Score = 68 (29.0 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD--VHVSLGTC 394
G+ TL+ LL DG + + +++ TN D++D AL+R GR D V+V L
Sbjct: 266 GQREHDQTLNQLLVEMDGFSN--TVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDI 323
Query: 395 GPHAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEV-----LLRNRGNVDLA- 448
K+L I+S L D+ E R + A + V +L R N L
Sbjct: 324 NGRK-KILEIYIKKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRNNKSLVT 381
Query: 449 MKEVVSAMQAKILSGRE 465
+ E+ A K+ G E
Sbjct: 382 INELYEARD-KVSMGPE 397
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 97 (39.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T++ + L QLK I E + E + G RG LLYGPPG+GK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 251 YLCYDVYDLE----LTKVTDNSE--LRALLLQTTNR--SIIVIEDID 289
+ V + ++K +E LR + + T R SII I+++D
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELD 456
Score = 80 (33.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 329 CGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDV 387
C E RV S LL DG+ S SE +++V TN ++D AL R GR D
Sbjct: 459 CPKREGAQSEVEKRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDK 517
Query: 388 HVSLG 392
+ +G
Sbjct: 518 EIEIG 522
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 91 (37.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
K+++ E + E Y ++G G L+YGPPG+GK+ L+ A+AN
Sbjct: 147 KQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Score = 78 (32.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + K+I+ TN D++DPAL+R GR+D
Sbjct: 257 EVQRILLE-LLNQMDG-FDKSTNVKVIM-ATNRADTLDPALLRPGRLD 301
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 91 (37.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
K+++ E + E Y ++G G L+YGPPG+GK+ L+ A+AN
Sbjct: 147 KQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Score = 78 (32.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + K+I+ TN D++DPAL+R GR+D
Sbjct: 257 EVQRILLE-LLNQMDG-FDKSTNVKVIM-ATNRADTLDPALLRPGRLD 301
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 97 (39.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T++ + L QLK I E + E + G RG LLYGPPG+GK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 251 YLCYDVYDLE----LTKVTDNSE--LRALLLQTTNR--SIIVIEDID 289
+ V + ++K +E LR + + T R SII I+++D
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELD 456
Score = 80 (33.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 329 CGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDV 387
C E RV S LL DG+ S SE +++V TN ++D AL R GR D
Sbjct: 459 CPKREGAQSEVEKRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDK 517
Query: 388 HVSLG 392
+ +G
Sbjct: 518 EIEIG 522
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 92 (37.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
TFE +A + K+++ E + + K+F GR K G LL GPPG+GK+ L A+A
Sbjct: 151 TFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPK-GVLLVGPPGTGKTLLARAVAGE 209
Query: 252 LCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDID 289
+ + E+ S +R L +Q + II I++ID
Sbjct: 210 AGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEID 255
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHV 389
G + TL+ LL DG S +E I++ TN D +DPAL+R GR D V
Sbjct: 268 GHDEREQTLNQLLVEMDGFES--NEGVILIAATNRPDVLDPALLRPGRFDRQV 318
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 93 (37.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 193 FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN-- 250
F +A + K++I E F +FY R+G RG +L GPPG+GK+ L A A
Sbjct: 295 FADVAGVDEAKEEIME-FVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 251 ---YLCYDVYD-LELTKVTDNSELRALLLQTTNRS--IIVIEDID 289
+L + LE+ S +R L + II I++ID
Sbjct: 354 NVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEID 398
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFT-TNHRDSVDPALIRCGRMDVHVSL 391
TL+ LL DG S E I+VF TN D +DPAL+R GR D +++
Sbjct: 419 TLNQLLVEMDGF---TSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITI 464
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 107 DSFSGHSLSWTHHVDTVQDSVEE-------KRSF-TLKL----PKRHRQTLLSAYLDHVT 154
D+FS L+ + T +V + +RSF +LK+ P++H+ L+S+ VT
Sbjct: 27 DNFSSLRLARAYTFSTRSTAVSQFSLLSLSQRSFQSLKINKGIPEKHKIPLISSKQFSVT 86
Query: 155 S-RAEEFERVSRERRLFTNNGHGSYDS 180
S R++ S NG + DS
Sbjct: 87 SKRSQNGSSGSNSDANGRKNGQKNDDS 113
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 121 (47.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
++++ + L+P +K+ + +D +F + Y ++ WKRG + YGPPG+GK+ I A N
Sbjct: 190 ASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMN 249
Query: 251 YLCYDVYD 258
L Y + D
Sbjct: 250 ML-YKLKD 256
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 346 SGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALI-RCGRMD 386
S LN DGL + ++ ++ +TNH + +DP + R R D
Sbjct: 306 SYFLNEVDGLKN--NDGIFMIGSTNHLERLDPGISKRPSRFD 345
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
TL LLN DG + + KII+ TN D++DPAL+R GR+D + +
Sbjct: 255 TLMELLNQMDG-FDYLGQTKIIM-ATNRPDTLDPALLRPGRLDRKIEI 300
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A
Sbjct: 137 LNEQIR-ELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 187
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 85 (35.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A+
Sbjct: 145 LSDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 196
Score = 83 (34.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHA-FKVL 402
TL LLN DG + + K+I+ TN D +DPAL+R GR+D + + A +VL
Sbjct: 263 TLMELLNQLDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVL 320
Query: 403 AKNYLGIESH 412
+ GI H
Sbjct: 321 KIHAAGIAKH 330
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T++ + L QLK I E + E + G RG LLYGPPG+GK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKA-IREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 251 YLCYDVYDLE----LTKVTDNSE--LRALLLQTTNR--SIIVIEDID 289
+ V + ++K +E LR + + T R SII I+++D
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELD 456
Score = 79 (32.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/71 (35%), Positives = 34/71 (47%)
Query: 329 CGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDV 387
C E RV S LL DG+ S SE +++V TN ++D AL R GR D
Sbjct: 459 CPKREGAQNEVEKRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDK 517
Query: 388 HVSLGTCGPHA 398
+ +G P+A
Sbjct: 518 EIEIGV--PNA 526
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
TF+ + L Q++ ++ E + E + RVG +G LLYGPPG+GK+ L A+A
Sbjct: 179 TFDGIGGLTEQIR-ELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVA 236
Score = 79 (32.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
TL LL DG + + KII+ TN D++DPAL+R GR+D V +
Sbjct: 304 TLMELLTQMDG-FDNLGQTKIIM-ATNRPDTLDPALLRPGRLDRKVEI 349
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 98 (39.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q++ +I E + E + +G +G LLYGPPG+GK+ L A+A
Sbjct: 140 STYEMVGGLDKQIQ-EIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA 198
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDID 289
++ C V EL + + + S + R L + SII +++ID
Sbjct: 199 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID 246
Score = 68 (29.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + K+I+ TN D +D AL+R GR+D
Sbjct: 258 GDSEVQRTMLELLNQLDG-FEATKNIKVIM-ATNRIDVLDQALLRPGRID 305
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 84 (34.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 204 KQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
+++ E + E + RVG +G LLYGPPG+GK+ L A+A+
Sbjct: 149 RELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHA-FKVL 402
TL LLN DG + + K+I+ TN D +DPAL+R GR+D + + + ++L
Sbjct: 262 TLMELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEIL 319
Query: 403 AKNYLGIESHHALFDVVESCIRAGGALTPAQIGEV 437
+ GI H + D E+ ++ G A + +
Sbjct: 320 KIHASGIAKHGEI-DY-EAIVKLGEGFNGADLRNI 352
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 32/111 (28%), Positives = 57/111 (51%)
Query: 188 RHPS-TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIA 246
+HP+ +F + K++ E L + EFY ++G RG LL+GPPG GK+ L
Sbjct: 244 QHPTESFRDIGGMDSTLKELCEMLIHIKS-PEFYFQLGLLPSRGLLLHGPPGCGKTFLAR 302
Query: 247 AMANYLCYDVYDLELTK----VTDNSE--LRALLLQTTNRS--IIVIEDID 289
A++ L + ++ T+ ++ SE +R + Q S ++ I++ID
Sbjct: 303 AISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEID 353
Score = 75 (31.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEK--IIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
G SG ++ LL DG+ E K I+ TN D +DPA++R GR+D + +G
Sbjct: 777 GNNSGTRIVNQLLTEMDGV----EERKGVYILAATNRPDIIDPAILRPGRLDTILYVG 830
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 98 (39.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 176 GSYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYG 235
G + ++S + TF+ A + +K+++ E + N +EF ++ G +G LL+G
Sbjct: 298 GKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNK-GIYCPKGVLLHG 356
Query: 236 PPGSGKSSLIAAMA 249
PPG+GK+ L A+A
Sbjct: 357 PPGTGKTLLAKAIA 370
Score = 76 (31.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 37/143 (25%), Positives = 62/143 (43%)
Query: 324 IASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCG 383
I S G G E + L +L DG + + + +++ TN D +DPAL+R G
Sbjct: 420 IGSKRGGPDIGGGGAEREQGLLQ-ILTEMDG-FKVTTSQVLVIGATNRLDILDPALLRKG 477
Query: 384 RMDVHVSLGTCGPHA----FKVLAKNYL---GIESHHALFDVVESCIRAGGALTPAQIGE 436
R D + +G KV A+N E L +V E+ GA + E
Sbjct: 478 RFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNE 537
Query: 437 V-LLRNRGNVD-LAMKEVVSAMQ 457
+L R ++D + +E++ A++
Sbjct: 538 AGILTARKDLDYIGREELLEALK 560
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 84 (34.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKI-IVFTTNHRDSVDPALIRCGRMDVHVSLGTCG 395
G+ + T+ LLN DG S+++I ++ TN D +DPAL+R GR+D +
Sbjct: 327 GDREVQRTMLELLNQLDGF---ASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPN 383
Query: 396 PHA-FKVLA--KNYLGIESHHALFDVVESCIRAGGALTPA---QIGEVLLRNRGNVDLAM 449
A +L + +E ++ S GGA A + G + LR +G+ +
Sbjct: 384 EEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALR-KGHSKIGH 442
Query: 450 KEVVSAM---QAK 459
+ V A+ QAK
Sbjct: 443 ENYVDAIAEVQAK 455
Score = 83 (34.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 34/129 (26%), Positives = 55/129 (42%)
Query: 125 DSVEEKRSFTLKLPKRHRQTL-LSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWV 183
D+ +S +K R L L +DH + + V+++ L + YD+
Sbjct: 139 DATRVGKSAVIKTSTRQTIYLPLIGLVDHEKLKPGDLIGVNKDSYLILDTLPAEYDNRVK 198
Query: 184 SVPFRHPSTFETLALEPQLKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSG 240
++ T E L KQI E + A E + ++G +G L+YGPPG+G
Sbjct: 199 AMEVDEKPT-EKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTG 257
Query: 241 KSSLIAAMA 249
K+ L A A
Sbjct: 258 KTLLARACA 266
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 96 (38.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
K+++ E + + Y ++G RG LLYGPPG+GK+ L+ A+AN
Sbjct: 143 KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190
Score = 68 (29.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 365 IVFTTNHRDSVDPALIRCGRMD 386
++ TN D++DPAL+R GR+D
Sbjct: 276 VIMATNRADTLDPALLRPGRLD 297
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 86 (35.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 156 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 206
Score = 79 (32.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 267 GDREVQRTMLELLNQLDG-FQPTTQVKVIA-ATNRVDILDPALLRSGRLD 314
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 95 (38.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
K++I E + + Y ++G RG LLYGPPG+GK+ L+ A+AN
Sbjct: 181 KQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ + LL DG + + K+I+ TN D++DPAL+R GR+D
Sbjct: 291 EVQRILIE-LLTQMDG-FDQSTNVKVIM-ATNRADTLDPALLRPGRLD 335
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 88 (36.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 39/128 (30%), Positives = 58/128 (45%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLA 403
T++ LL+ DG + I++ TN RD +D AL+R GR DV V + T K +
Sbjct: 420 TINQLLSEMDGFHQ--NAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEIL 477
Query: 404 KNYLGIESHHALFDVVESCIRAGGALTPAQ----IGEVLLRNR--GNVDLAMKEVVSAMQ 457
YL H + D+ + R T A I + LR G ++MK + +A
Sbjct: 478 SLYLTKILHDEI-DL-DMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARD 535
Query: 458 AKILSGRE 465
K+L G E
Sbjct: 536 -KVLMGPE 542
Score = 83 (34.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
TFE + + K+++ E + F E + +G +G LL GPPG+GK+ L A+A
Sbjct: 298 TFEDVKGCDEAKQELKE-VVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVA 354
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 87 (35.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K++I E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 169 KQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 217
Score = 78 (32.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + K+I+ TN D++DPAL+R GR+D
Sbjct: 279 EVQRILLE-LLNQMDG-FDQTTNVKVIM-ATNRADTLDPALLRPGRLD 323
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A
Sbjct: 170 KQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVA 216
Score = 80 (33.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + K+I+ TN +D++DPAL+R GR+D
Sbjct: 280 EVQRILLE-LLNQMDG-FDQSTNVKVIM-ATNRQDTLDPALLRPGRLD 324
>UNIPROTKB|J3QRR3 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000584880 Uniprot:J3QRR3
Length = 127
Score = 98 (39.6 bits), Expect = 0.00030, P = 0.00030
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A+
Sbjct: 2 TYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 60
Query: 251 Y 251
+
Sbjct: 61 H 61
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 93 (37.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 223 VGRAWKRGYLLYGPPGSGKSSLIAAM 248
+G W RG LLYGPPG+GK+SL+ A+
Sbjct: 51 LGLKWPRGLLLYGPPGTGKTSLVRAV 76
Score = 75 (31.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 338 EESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLGT 393
E+ R+ S L D S +++V +TN D++DPAL R GR D V + T
Sbjct: 140 EQDVRIA-SQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVST 195
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 83 (34.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 194 ETLALE--PQLKK-QITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ETL E ++K ++ E + N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 127 ETLPTEYDSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 185
Score = 77 (32.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 246 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 293
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 87 (35.7 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
++K+ + E + + E + + G + RG L YGPPG+GK+ L A+AN
Sbjct: 503 EVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Score = 86 (35.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
GE RV +S LL DG+ + +++ TN +S+DPAL R GR D V +G P
Sbjct: 336 GEVERRV-VSQLLTLMDGMKA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDP 392
Score = 85 (35.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 205 QITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY---LCYDVYDLEL 261
QI E + + + +G RG LLYGPPG+GK+ + A+AN + + E+
Sbjct: 233 QIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEI 292
Query: 262 -TKVTDNSE--LRALLLQTTNRS--IIVIEDID 289
+K+ SE LR + S II I++ID
Sbjct: 293 MSKMAGESESNLRKAFEEAEKNSPAIIFIDEID 325
Score = 73 (30.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 330 GXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD--V 387
G G S RV ++ LL DG+ S + ++ TN + +DPAL R GR+D +
Sbjct: 606 GGSVGDAGGASDRV-VNQLLTEMDGMTS--KKNVFVIGATNRPEQLDPALCRPGRLDSLI 662
Query: 388 HVSL 391
+V L
Sbjct: 663 YVPL 666
Score = 51 (23.0 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 183 VSVPFRHPSTFETLALEP 200
V +P RHP F+++ ++P
Sbjct: 238 VELPLRHPQLFKSIGIKP 255
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 86 (35.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 137 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 187
Score = 77 (32.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 248 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 295
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 86 (35.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 141 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 191
Score = 77 (32.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 252 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 299
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 89 (36.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDL---ELTK-VTDNSE--LR 271
E Y +G RG LL+GPPG GK+ L A+A L + + E+ V+ SE LR
Sbjct: 287 EVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLR 346
Query: 272 ALLLQTTNRS--IIVIEDID 289
L Q + + I+ I++ID
Sbjct: 347 ELFDQAVSNAPCIVFIDEID 366
Score = 82 (33.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D V LG
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLG 432
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 80 (33.2 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD--VHVSLGTC 394
G+ + T+ L+N DG + K+++ TN D++DPAL+R GR+D + SL
Sbjct: 154 GDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFSLPDL 211
Query: 395 -G-PHAFKVLAKNYLGIESHHALFDVVESCIRAGGA 428
G H FK+ A++ + +E + C + GA
Sbjct: 212 EGRTHIFKIHARS-MSVERDIRFELLARLCPNSTGA 246
Score = 71 (30.1 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 229 RGYLLYGPPGSGKSSLIAAMANYL--CY-DVYDLELTK--VTDNSEL-RAL--LLQTTNR 280
+G LL+GPPG+GK+ A+AN C+ V EL + V + + + R L + +T
Sbjct: 73 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 132
Query: 281 SIIVIEDID 289
+I ++ID
Sbjct: 133 CLIFFDEID 141
Score = 45 (20.9 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 183 VSVPFRHPSTFETLALEP 200
V P HP F L +EP
Sbjct: 54 VETPLLHPERFVNLGIEP 71
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 86 (35.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 149 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 199
Score = 77 (32.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 260 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 307
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 86 (35.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 186 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 236
Score = 78 (32.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 325 ASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGR 384
A+ T G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR
Sbjct: 285 ATGTKRFDSEKAGDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGR 342
Query: 385 MD 386
+D
Sbjct: 343 LD 344
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 85 (35.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYG PG+GK+ L A+AN
Sbjct: 190 LDSQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 82 (33.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
TL LLN DG + + K+I+ TN D++DPAL+R GR+D
Sbjct: 265 TLMELLNQMDG-FDALGQVKMIM-ATNRPDTLDPALLRPGRLD 305
Score = 81 (33.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYL 252
+ + RVG + +G LLYGPPG+GK+ L A+A+ +
Sbjct: 166 DIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQM 200
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 83 (34.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
LE Q++ ++ E + E Y +G +G +LYG PG+GK+ L A+AN
Sbjct: 189 LEAQVQ-EMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFL 247
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + + SI+ I++ID
Sbjct: 248 RVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEID 287
Score = 81 (33.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG + ++ K+I+ TN +++DPALIR GR+D
Sbjct: 300 GEREIQRTMLELLNQLDG-FDARTDVKVIM-ATNRIETLDPALIRPGRID 347
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 84 (34.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K++I E + + Y ++G RG LL+GPPG GK+ L A+A++
Sbjct: 161 KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHH 209
Score = 79 (32.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
E R+ L LLN DG + + K+I+ TN D++DPAL+R GR+D + L
Sbjct: 271 EVQRILLE-LLNQMDG-FDETTNIKVIM-ATNRADTLDPALLRPGRLDRKIEL 320
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 102 (41.0 bits), Expect = 0.00044, P = 0.00044
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 69 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 127
Query: 250 NY 251
++
Sbjct: 128 HH 129
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 86 (35.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 241
Score = 77 (32.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 302 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 349
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 86 (35.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 241
Score = 77 (32.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 302 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 349
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 86 (35.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 241
Score = 77 (32.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 302 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 349
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 84 (34.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 204 KQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
+++ E + E + RVG +G LLYGPPG+GK+ L A+A+
Sbjct: 149 RELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Score = 78 (32.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHA-FKVL 402
TL LLN DG + + K+I+ TN D +DPAL+R GR+D + + + +L
Sbjct: 262 TLMELLNQLDG-FDNLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDIL 319
Query: 403 AKNYLGIESH 412
+ GI H
Sbjct: 320 KIHAAGIAKH 329
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 86 (35.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 244
Score = 77 (32.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 305 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 352
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 86 (35.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 244
Score = 77 (32.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 305 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 352
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 85 (35.0 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + Y ++G RG LLYGPPG+GK+ L A+A++
Sbjct: 159 KQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207
Score = 77 (32.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 345 LSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
L LLN DG + K+I+ TN +D++DPAL+R GR+D
Sbjct: 274 LMELLNQMDG-FDVSVNVKVIM-ATNRQDTLDPALLRPGRLD 313
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 84 (34.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYD-- 255
L+ Q++ +I E + E+Y +G +G +LYG PG+GK+ L A+AN
Sbjct: 190 LDNQIQ-EIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFL 248
Query: 256 -VYDLELTK--VTDNSELRALLLQTTNR---SIIVIEDID 289
V EL + + D +L L + SI+ I++ID
Sbjct: 249 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 79 (32.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +++DPALIR GR+D
Sbjct: 301 GEREIQRTMLELLNQLDGFDSR-GDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 86 (35.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 198 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 248
Score = 77 (32.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + ++ K+I TN D +DPAL+R GR+D
Sbjct: 309 GDREVQRTMLELLNQLDG-FQPNTQVKVIA-ATNRVDILDPALLRSGRLD 356
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 88 (36.0 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G+ + T+ L+N DG + K+++ TN D++DPAL+R GR+D V G
Sbjct: 291 GDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKVEFGLPDQ 348
Query: 397 ----HAFKVLAKNYLGIESHHALFDVVES-CIRAGGALTPA---QIGEVLLRNRGNVDLA 448
H FK+ A++ + +E FD++ C + GA + + G +R R V
Sbjct: 349 DGRSHIFKIHARS-MSVE-RDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV-AT 405
Query: 449 MKEVVSAMQAKILS 462
K+ + A++ I S
Sbjct: 406 EKDFLEAVKKVIKS 419
Score = 67 (28.6 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 229 RGYLLYGPPGSGKSSLIAAMAN 250
+G LL+GPPG+GK+ A+AN
Sbjct: 210 KGVLLFGPPGTGKTLCARAVAN 231
Score = 45 (20.9 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 183 VSVPFRHPSTFETLALEP 200
V P HP F L +EP
Sbjct: 191 VETPLLHPEKFVNLGIEP 208
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 88 (36.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDL---ELTK-VTDNSE--LR 271
E Y +G RG LL+GPPG GK+ L A+A L + + E+ V+ SE LR
Sbjct: 287 EVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLR 346
Query: 272 ALLLQTTNRS--IIVIEDID 289
L Q + + I+ I++ID
Sbjct: 347 DLFDQAVSNAPCIVFIDEID 366
Score = 81 (33.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 342 RVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDSVDPALIRCGRMDVHVSLG 392
R ++ LL D L + + +++V TN DS+DPAL R GR D V LG
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLG 432
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 86 (35.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 175 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 225
Score = 75 (31.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + + K+I TN D +DPAL+R GR+D
Sbjct: 286 GDREVQRTMLELLNQLDG-FQPNMQVKVIA-ATNRVDILDPALLRSGRLD 333
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 87 (35.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
GE R+ +S LL DG+ S I++ TN +S+DPAL R GR D + +G
Sbjct: 315 GEVERRI-VSQLLTLMDGMKK--SSHLIVMAATNRPNSIDPALRRFGRFDREIDIG 367
Score = 81 (33.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 205 QITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY---LCYDVYDLEL 261
QI E + + +G RG L+YGPPG+GK+ + A+AN + + E+
Sbjct: 212 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEI 271
Query: 262 -TKVTDNSE--LRALLLQTTNRS--IIVIEDID 289
+K+ SE LR + S II I++ID
Sbjct: 272 MSKLAGESESNLRKAFEEAEKNSPAIIFIDEID 304
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 91 (37.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSL---IAAM 248
TF +A + K+++ E + F +E + +G +G LL GPPG+GK+ L IA
Sbjct: 157 TFANVAGVDEAKQEVGE-VVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGE 215
Query: 249 ANYLCYDVYDLELTKV---TDNSELRALLLQTTNRS--IIVIEDID 289
A + + E ++ S +R L Q + II I++ID
Sbjct: 216 AGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEID 261
Score = 74 (31.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
G + TL+ +L DG + S I++ TN D +DPAL+R GR D V L
Sbjct: 274 GHDEREQTLNQILVEMDGFDTDTSV--IVIAATNRPDILDPALLRPGRFDRRVVL 326
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 85 (35.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 44/182 (24%), Positives = 79/182 (43%)
Query: 119 HVDTVQDSVEEKRSFTLKLPKRHRQTLLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSY 178
H+ + + +E +L P+ ++ T S+ + + ++ E R + GS
Sbjct: 209 HIRSPSNLIEAISDMSLDEPRIYKFTAASS----MEIETPDLLKLPHEDRTQSAYNQGSE 264
Query: 179 DSGWVSVPFRHPS--TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYG 235
++ P PS TF ++ L+ Q+ QI + + E + RG LLYG
Sbjct: 265 ETQNFDGP---PSAVTFSSIGGLQAQIA-QIRDIVELPFQNPELFKFFNIMPPRGVLLYG 320
Query: 236 PPGSGKSSLIAAMANYLCYDVYDLELTKVTDN------SELRALL--LQTTNRSIIVIED 287
PPG+GK+ ++ A+A V+ ++ V S LR + + SII I++
Sbjct: 321 PPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDE 380
Query: 288 ID 289
ID
Sbjct: 381 ID 382
Score = 83 (34.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 337 GEE--SGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
GE+ S RV ++ LLN DG+ + +++ TN D +DPAL+R GR+D L
Sbjct: 658 GEDNSSDRV-VAALLNELDGIEAL--RNVLVLAATNRPDMIDPALMRPGRLD---RLLYV 711
Query: 395 GPHAFKVLAKNYLGIESHHALF--DV-VESCIRAGGALTPAQIGEVLLRNRGNV----DL 447
GP F+ K + I++ F DV ++ + A++ L + G + DL
Sbjct: 712 GPPNFEA-RKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEV-VALCQEAGLIAMHEDL 769
Query: 448 AMKEVVSA-MQAKILSGREVMECDEL 472
KE+ A + +L+ R+ + D L
Sbjct: 770 EAKEICQAHFKTALLALRKAITRDML 795
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 82 (33.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
LE Q++ +I E + E Y +G +G +LYG PG+GK+ L A+AN
Sbjct: 193 LEAQIQ-EIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244
Score = 80 (33.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +S+DPAL+R GR+D
Sbjct: 304 GEREIQRTMLELLNQLDGFDSR-GDVKVIL-ATNRIESLDPALLRPGRID 351
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 82 (33.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
LE Q++ +I E + E Y +G +G +LYG PG+GK+ L A+AN
Sbjct: 193 LEAQIQ-EIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244
Score = 80 (33.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG S + K+I+ TN +S+DPAL+R GR+D
Sbjct: 304 GEREIQRTMLELLNQLDGFDSR-GDVKVIL-ATNRIESLDPALLRPGRID 351
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 86 (35.3 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 202 LKKQITEDLTAFA---NGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
L KQI E + A N KE + +G +G L+YGPPG+GK+ L A A
Sbjct: 179 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 229
Score = 75 (31.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
G+ + T+ LLN DG + + K+I TN D +DPAL+R GR+D
Sbjct: 290 GDREVQRTMLELLNQLDG-FQPNMQVKVIA-ATNRVDILDPALLRSGRLD 337
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 84 (34.6 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 198 LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
LE Q++ +I E + E Y +G +G +LYG PG+GK+ L A+AN
Sbjct: 191 LESQIQ-EIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
Score = 78 (32.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
GE + T+ LLN DG + + K+I+ TN +S+DPALIR GR+D
Sbjct: 302 GEREIQRTMLELLNQLDG-FDDRGDIKVIM-ATNKIESLDPALIRPGRID 349
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 86 (35.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 74 (31.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 22 PSQLLSLLHSFYESLQDLFSPY 43
P LS L E L+DL+S Y
Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRY 44
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 86 (35.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 74 (31.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 22 PSQLLSLLHSFYESLQDLFSPY 43
P LS L E L+DL+S Y
Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRY 44
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 86 (35.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 74 (31.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 22 PSQLLSLLHSFYESLQDLFSPY 43
P LS L E L+DL+S Y
Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRY 44
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 86 (35.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 74 (31.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 22 PSQLLSLLHSFYESLQDLFSPY 43
P LS L E L+DL+S Y
Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRY 44
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 86 (35.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 74 (31.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 22 PSQLLSLLHSFYESLQDLFSPY 43
P LS L E L+DL+S Y
Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRY 44
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 86 (35.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 74 (31.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 22 PSQLLSLLHSFYESLQDLFSPY 43
P LS L E L+DL+S Y
Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRY 44
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 85 (35.0 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 337 GEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
GE RV +S LL DG+ + +++ TN +S+DPAL R GR D V +G P
Sbjct: 338 GEVERRV-VSQLLTLMDGMKA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDP 394
Score = 82 (33.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY---LCYDVYDLEL-TKVTDNSE--LR 271
+ + +G RG L+YGPPG+GK+ + A+AN + + E+ +K+ SE LR
Sbjct: 248 QLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLR 307
Query: 272 ALLLQTTNRS--IIVIEDID 289
+ S II I++ID
Sbjct: 308 KAFEEAEKNSPAIIFIDEID 327
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 86 (35.3 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
K+++ E + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 173 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 221
Score = 74 (31.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 339 ESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD 386
E R+ L LLN DG + + ++ TN D++DPAL+R GR+D
Sbjct: 283 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 327
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 102 (41.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 35/124 (28%), Positives = 60/124 (48%)
Query: 128 EEKRSFTLKLPKRHRQTLLSAY-LDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVP 186
++K++ KL K R+ + AY L+ +T +A+ F+ N S V +P
Sbjct: 878 KKKKNPNDKLDKNERR--IPAYILNKLTIKAKHFQHALN----ICNPS--SLRERQVQIP 929
Query: 187 FRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIA 246
T+ + ++K+Q+ E + K Y++ + +G LLYGPPG GK+ L
Sbjct: 930 ---TVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAK 986
Query: 247 AMAN 250
A+AN
Sbjct: 987 AIAN 990
Score = 98 (39.6 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 34/107 (31%), Positives = 58/107 (54%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T+E L ++ QL K I E + E + +G + +G L++G PG+GK+S+ A+AN
Sbjct: 525 TYEDLGGMKKQLNK-IRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 251 Y---LCYDVYDLEL-TKVTDNSE--LRALLLQTTNRS--IIVIEDID 289
CY + E+ +K SE LR + + + ++ II I++ID
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID 630
Score = 72 (30.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 345 LSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
+S LL DGL + +++ TN +S+DPAL R GR D + +
Sbjct: 648 VSQLLTLMDGLKK--NNNVLVLAATNRPNSIDPALRRFGRFDREIEI 692
Score = 68 (29.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 338 EESGRVTLSGLLNFTDGLWSCCSEEK--IIVFTTNHRDSVDPALIRCGRMD--VHVSLGT 393
+ S RV ++ +L DG+ +E+K I+ TN D +D AL R GR+D +++SL
Sbjct: 1050 DASDRV-INQILTEIDGI----NEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPD 1104
Query: 394 CGPH--AFKVLAKN 405
FK + KN
Sbjct: 1105 LKSRYSIFKAILKN 1118
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 102 (41.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 35/124 (28%), Positives = 60/124 (48%)
Query: 128 EEKRSFTLKLPKRHRQTLLSAY-LDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVP 186
++K++ KL K R+ + AY L+ +T +A+ F+ N S V +P
Sbjct: 878 KKKKNPNDKLDKNERR--IPAYILNKLTIKAKHFQHALN----ICNPS--SLRERQVQIP 929
Query: 187 FRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIA 246
T+ + ++K+Q+ E + K Y++ + +G LLYGPPG GK+ L
Sbjct: 930 ---TVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAK 986
Query: 247 AMAN 250
A+AN
Sbjct: 987 AIAN 990
Score = 98 (39.6 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 34/107 (31%), Positives = 58/107 (54%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
T+E L ++ QL K I E + E + +G + +G L++G PG+GK+S+ A+AN
Sbjct: 525 TYEDLGGMKKQLNK-IRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 251 Y---LCYDVYDLEL-TKVTDNSE--LRALLLQTTNRS--IIVIEDID 289
CY + E+ +K SE LR + + + ++ II I++ID
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID 630
Score = 72 (30.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 345 LSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
+S LL DGL + +++ TN +S+DPAL R GR D + +
Sbjct: 648 VSQLLTLMDGLKK--NNNVLVLAATNRPNSIDPALRRFGRFDREIEI 692
Score = 68 (29.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 338 EESGRVTLSGLLNFTDGLWSCCSEEK--IIVFTTNHRDSVDPALIRCGRMD--VHVSLGT 393
+ S RV ++ +L DG+ +E+K I+ TN D +D AL R GR+D +++SL
Sbjct: 1050 DASDRV-INQILTEIDGI----NEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPD 1104
Query: 394 CGPH--AFKVLAKN 405
FK + KN
Sbjct: 1105 LKSRYSIFKAILKN 1118
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 83 (34.3 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 202 LKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
+K+++ E + E Y + G RG L YGPPG GK+ L A+AN
Sbjct: 491 VKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 539
Score = 75 (31.5 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 319 EMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPA 378
E+ S IA + G G S RV ++ +L DG+ + + I+ TN D +DPA
Sbjct: 584 ELDS-IAKARGGGAGGDGGGASDRV-INQVLTEMDGMNA--KKNVFIIGATNRPDIIDPA 639
Query: 379 LIRCGRMD 386
++R GR+D
Sbjct: 640 VLRPGRLD 647
Score = 50 (22.7 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 183 VSVPFRHPSTFETLALEP 200
V +P RHP F+ + ++P
Sbjct: 226 VELPLRHPQLFKAIGIKP 243
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 83 (34.3 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 202 LKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
+K+++ E + E Y + G RG L YGPPG GK+ L A+AN
Sbjct: 491 VKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 539
Score = 75 (31.5 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 319 EMGSRIASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPA 378
E+ S IA + G G S RV ++ +L DG+ + + I+ TN D +DPA
Sbjct: 584 ELDS-IAKARGGGAGGDGGGASDRV-INQVLTEMDGMNA--KKNVFIIGATNRPDIIDPA 639
Query: 379 LIRCGRMD 386
++R GR+D
Sbjct: 640 VLRPGRLD 647
Score = 50 (22.7 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 183 VSVPFRHPSTFETLALEP 200
V +P RHP F+ + ++P
Sbjct: 226 VELPLRHPQLFKAIGIKP 243
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 87 (35.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA- 249
+TF+ +A + K++I E +F Y ++G +G +L GPPG+GK+ L A A
Sbjct: 351 TTFKDVAGMDEAKEEIME-FVSFLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAG 409
Query: 250 ----NYLCYDVYD-LELTKVTDNSELRALLLQTTNRS--IIVIEDID 289
N+ D +E+ S +R L + + I+ I++ID
Sbjct: 410 EAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEID 456
Score = 80 (33.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 344 TLSGLLNFTDGLWSCCSEEKIIVFT-TNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVL 402
TL+ LL DG S ++VF TN D +DPAL+R GR D + +G K +
Sbjct: 475 TLNQLLVEMDGF---SSTSGVVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDI 531
Query: 403 AKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLR--NRGNVDLAMKEVVSA 455
+L + L +E + LTP G + N G + A K+ SA
Sbjct: 532 FMVHL---KNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAARKDATSA 583
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 93 (37.8 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 176 GSYDSGWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYG 235
G D G VS TF +A + K+++ E++ F E Y R+G RG LL G
Sbjct: 308 GGPDGGKVSGG-GETITFADVAGVDEAKEEL-EEIVEFLRNPEKYVRLGARPPRGVLLVG 365
Query: 236 PPGSGKSSLIAAMAN-----YL-CYDVYDLELTKVTDNSELRALLLQTTNR--SIIVIED 287
PG+GK+ L A+A ++ C +EL S +R L + SII I++
Sbjct: 366 LPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDE 425
Query: 288 ID 289
ID
Sbjct: 426 ID 427
Score = 75 (31.5 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 324 IASSTCGXXXXXXGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCG 383
+A S G +E + TL+ LL DG S + I++ TN D +DPAL R G
Sbjct: 429 VAKSRDGKFRMGSNDEREQ-TLNQLLTEMDGFDS--NSAVIVLGATNRADVLDPALRRPG 485
Query: 384 RMDVHVSLGT 393
R D V++ T
Sbjct: 486 RFDRVVTVET 495
Score = 39 (18.8 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 425 AGGALTPAQIGEVLLRNRGN-VDLAMKEVVSAMQAKI 460
+GG + + G R++G VDL KEV +Q+ +
Sbjct: 703 SGGGIDDSG-GSPWGRDQGKLVDLVQKEVTILLQSAL 738
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 530 462 0.00096 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 219
No. of states in DFA: 618 (66 KB)
Total size of DFA: 292 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.35u 0.08s 35.43t Elapsed: 00:00:18
Total cpu time: 35.39u 0.08s 35.47t Elapsed: 00:00:19
Start: Fri May 10 17:01:18 2013 End: Fri May 10 17:01:37 2013
WARNINGS ISSUED: 1