BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009640
(530 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 119/241 (49%), Gaps = 46/241 (19%)
Query: 186 PFRHPST---FETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF HP + ++ LE +KK IT+D+ F ++Y G ++RGYLLYGPPGSGK+
Sbjct: 197 PFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKT 256
Query: 243 SLIAAMANYLCYDVYDLELTK--VTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRML 300
S + A+A L YD+ L L + +TD+ L LL ++++++ED+D +
Sbjct: 257 SFLYALAGELDYDICVLNLAEKGLTDD-RLNHLLSNVPPKAVVLLEDVDSAFQ------- 308
Query: 301 KSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCS 360
R S G + N VT SGLLN DG+ S S
Sbjct: 309 ---------------------GRERSGEVGFHAN--------VTFSGLLNALDGVTS--S 337
Query: 361 EEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHA--LFDV 418
+E+II TTNH + +DPAL+R GR+DV LG P + + + G A L D+
Sbjct: 338 DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADDLSDI 397
Query: 419 V 419
V
Sbjct: 398 V 398
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 22/254 (8%)
Query: 187 FRHPS---TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSS 243
F HP ++ L+ + I +D+ F N ++Y+ G ++RGYLLYGPPG+GKSS
Sbjct: 197 FGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSS 256
Query: 244 LIAAMANYLCYDVYDLELT-KVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKS 302
I A+A L + L L K ++ L LL RSII++EDID ++ T + L +
Sbjct: 257 FITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQ-TGNHDLSA 315
Query: 303 SNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEE 362
+ S A + S ++ G GN + ++G + +T SGLLN DG+ SE
Sbjct: 316 KSNSANAPSISSGGLQYQG------YYGNPSVSSGGSA--LTFSGLLNALDGV--AASEG 365
Query: 363 KIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESC 422
+I+ TTNH + +D LIR GR+D+ + +G C + + + + + FD+ +
Sbjct: 366 RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQMEQMFLKFYPTD-----FDLAKQF 420
Query: 423 IRA--GGALTPAQI 434
+ +PAQ+
Sbjct: 421 VEKLENYKFSPAQL 434
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 38/253 (15%)
Query: 186 PFRHPS---TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ L+ L +I D+ F + ++Y G ++RGYLLYGPPG GKS
Sbjct: 178 PFGYPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKS 237
Query: 243 SLIAAMANYLCYDV-YDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLK 301
S I A+A L + + + L LL +S++++ED+D + L+ D ++
Sbjct: 238 SFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-LSRDLAVE 296
Query: 302 SSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSE 361
+ +K G GR+T SGLLN DG+ +E
Sbjct: 297 NP-------------VKYQGL------------------GRLTFSGLLNALDGV--ASTE 323
Query: 362 EKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVES 421
+I+ TTNH D +DPALIR GR+D+ +G C + + + ++ + E
Sbjct: 324 ARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEH 383
Query: 422 CIRAGGALTPAQI 434
+RA ++PAQ+
Sbjct: 384 VLRATNQISPAQV 396
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 35/201 (17%)
Query: 195 TLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCY 254
++ LE + ++I +D+ F ++Y G ++RGYLLYGPPG GKSS I A+A L Y
Sbjct: 190 SVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEY 249
Query: 255 DV-YDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKR 313
+ + L LL +SII++ED+D +
Sbjct: 250 SICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAA---------------------- 287
Query: 314 SSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRD 373
S N + GR+T SGLLN DG+ +E +I+ TTNH D
Sbjct: 288 ----------FVSRDLNKQNPTAYQGMGRLTFSGLLNALDGV--ASTEARIVFMTTNHID 335
Query: 374 SVDPALIRCGRMDVHVSLGTC 394
+DPALIR GR+DV +G C
Sbjct: 336 RLDPALIRPGRVDVKQYVGHC 356
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 44/256 (17%)
Query: 186 PFRHPS---TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
PF +P ++ LE + ++I D+ F + ++Y G ++RGYLLYGPPG GKS
Sbjct: 178 PFGYPRRRRPLNSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKS 237
Query: 243 SLIAAMANYLCYDV-YDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSV---DLTADR 298
S I A+A L + + + L LL +S++++ED+D + DL A+
Sbjct: 238 SFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAEN 297
Query: 299 MLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSC 358
+K GR+T SGLLN DG+
Sbjct: 298 PIKYQGL-----------------------------------GRLTFSGLLNALDGV--A 320
Query: 359 CSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDV 418
+E +I+ TTNH D +DPALIR GR+D+ +G C + + + ++ +
Sbjct: 321 STEARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENF 380
Query: 419 VESCIRAGGALTPAQI 434
+ ++A ++PAQ+
Sbjct: 381 ADRVLQATTQISPAQV 396
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 48/269 (17%)
Query: 195 TLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCY 254
++ L+ +K+ I +D+ F ++Y G ++RGYLLYGPPGSGK+S I A+A L Y
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 255 DVYDLELTK--VTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTK 312
++ L L++ +TD+ L L+ RSI+++EDID + + K
Sbjct: 287 NICILNLSENNLTDD-RLNHLMNNMPERSILLLEDIDAAFN------------------K 327
Query: 313 RSSSIKEMGSRIASSTCGNNNNNNGEES--GRVTLSGLLNFTDGLWSCCSEEKIIVFTTN 370
RS + GE+ VT SGLLN DG+ S SEE I TTN
Sbjct: 328 RSQT--------------------GEQGFHSSVTFSGLLNALDGVTS--SEETITFMTTN 365
Query: 371 HRDSVDPALIRCGRMDVHVSLGTCGPHAF-KVLAKNYLGIESHHALFDVVESCIRAGGAL 429
H + +D A++R GR+D V +G P+ K+ K Y G F V S +
Sbjct: 366 HPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGETDICKKF--VNSVKELDITV 423
Query: 430 TPAQIGEVLLRNRGNVDLAMKEVVSAMQA 458
+ AQ+ + + N+ A+K V S A
Sbjct: 424 STAQLQGLFVMNKDAPHDALKMVSSLRNA 452
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 34/241 (14%)
Query: 195 TLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCY 254
++ LE + ++I +D+ F ++Y G ++RGYLLYGPPG GKSS I A+A L Y
Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGY 249
Query: 255 DVYDLELT-KVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKR 313
+ + L+ + + L LL +SII++ED+D + + +L + N
Sbjct: 250 SICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAA--FVSRELLPTENPLAY----- 302
Query: 314 SSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRD 373
+ GR+T SGLLN DG+ SE +I+ TTN +
Sbjct: 303 ------------------------QGMGRLTFSGLLNALDGV--ASSEARIVFMTTNFIE 336
Query: 374 SVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQ 433
+DPAL+R GR+D+ +G C + + + ES E + A L+ AQ
Sbjct: 337 RLDPALVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADHFSEQALAAHTDLSAAQ 396
Query: 434 I 434
+
Sbjct: 397 V 397
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 35/248 (14%)
Query: 188 RHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAA 247
R +++ L+ L +I +D+ F + ++Y G ++RGYLLYGPPG GKSS I A
Sbjct: 183 RRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITA 242
Query: 248 MANYLCYDV-YDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKSSNTS 306
+A L + + + L LL +S++++ED+D + L+ D +++
Sbjct: 243 LAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-LSRDLAVENP--- 298
Query: 307 TTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIV 366
IK G GR+T SGLLN DG+ +E +I+
Sbjct: 299 ----------IKYQGL------------------GRLTFSGLLNALDGV--ASTEARIVF 328
Query: 367 FTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESCIRAG 426
TTN+ D +DPALIR GR+D+ +G C + + + ++ + E ++A
Sbjct: 329 MTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKAT 388
Query: 427 GALTPAQI 434
++PAQ+
Sbjct: 389 SEISPAQV 396
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 60/298 (20%)
Query: 169 LFTNNGHGSYDSGWVSVPFRHPSTFETLA---LEPQLKKQITEDLTAFANGKEFYHRVGR 225
++ N G+G+++ F +P + +L+ L LK ++ ED+ +F + +Y G
Sbjct: 165 IYINGGNGNWER------FGNPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGI 218
Query: 226 AWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLEL-TKVTDNSELRALLLQTTNRSIIV 284
++RGYLLYG PG+GKSSLI A+A L D+ + L +K D+ ++ LL +SI++
Sbjct: 219 PYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILL 278
Query: 285 IEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVT 344
IEDID + D + ++N S + +T
Sbjct: 279 IEDIDAAFKSHRDNVDSNNNNSNNNNS-------------------------------LT 307
Query: 345 LSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP-------- 396
SGLLN DG+ E +I+ TTN + +D ALIR GR+D+ + +
Sbjct: 308 YSGLLNALDGV--ASQEGRILFMTTNKIELLDSALIREGRIDLKIKVSNATKSQAAQLFT 365
Query: 397 HAFKVLAKNYLGIESHHALFDVVESCIRAGGALTPAQIGEVLLRNRGNVDLAMKEVVS 454
H + + N L I L D L+ +QI LL+ + + A++EV S
Sbjct: 366 HFYNLPTDNQLAIRFSENLHD---------HQLSMSQIQGFLLKYINSPEKAIEEVQS 414
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 244 LIAAMANYLCYDVYDLELTKVTDNSELRALLLQTT-NRSIIVIEDIDCSVDLTADRMLKS 302
+I A++ + ++ L L + D++EL LL +I+V+EDIDC+ + R K
Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRA-KE 59
Query: 303 SNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEE 362
T T S+++ ++I + E+ ++TLSG+LN DG+++ SE
Sbjct: 60 EETVVEKVTDDKSTLE---NKILADQLKK-----VEKVSKLTLSGILNSLDGIFN--SEG 109
Query: 363 KIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYLGIESHHALFDVVESC 422
+I++ TTNH + +DPALIR GR+D+ + C + + +N+ G + + + S
Sbjct: 110 RIVIMTTNHSEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYGKNADSDILSKIPSD 169
Query: 423 IRAGGALTPAQIGEVLLRNRGNVDLAMKEV 452
I +PA + +LL R N + ++ E+
Sbjct: 170 I-----YSPAHVSGLLLSYRNNPENSLIEL 194
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 46/209 (22%)
Query: 191 STFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMAN 250
+TF+ +A + K+++ E L + + +HRVG RG LL GPPG+GK+ L A+A
Sbjct: 173 TTFDEVAGQTNAKREVQE-LVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAG 231
Query: 251 YLCYDVYDLELTKVTD------NSELRAL--LLQTTNRSIIVIEDIDCSVDLTADRMLKS 302
+ Y + ++ + S +R L + + + SII I+++D
Sbjct: 232 EAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELD------------- 278
Query: 303 SNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEE 362
+ +T+ G + TL+ +L DG +
Sbjct: 279 ----SVGRTR------------------GAGYGGGHDEREQTLNQILAEMDGF--AGHDA 314
Query: 363 KIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
I++ TN D +DPAL+R GR D HV+L
Sbjct: 315 VIVLAATNRPDVLDPALMRPGRFDRHVTL 343
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 46/208 (22%)
Query: 190 PSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
P+TFE +A + ++ E + F E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 247 PTTFEDVAGIEEAVDEVRE-VVDFLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIA 305
Query: 250 NYLCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDIDCSVDLTADRMLK 301
+ L E+ + +R + Q NR+ II I+++D
Sbjct: 306 GEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDA----------- 354
Query: 302 SSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSE 361
+G + S G G + TL+ LL DG S
Sbjct: 355 ------------------LGKSRSGSVVG------GHDEREQTLNALLVEMDGFDSNSG- 389
Query: 362 EKIIVFTTNHRDSVDPALIRCGRMDVHV 389
I+V TN +++DPAL+R GR D HV
Sbjct: 390 -VIVVAATNRPETLDPALLRPGRFDRHV 416
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 49/185 (26%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE----LTKVTDNSE--LR 271
E YH +G RG LL+GPPG GK+ L A+A L + + ++ V+ SE LR
Sbjct: 288 EVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLR 347
Query: 272 ALLLQTTNRS--IIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASS-- 327
L Q + + II I++ID KR + K+M RI +
Sbjct: 348 ELFEQAVSNAPCIIFIDEID------------------AITPKREVASKDMERRIVAQLL 389
Query: 328 TCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDV 387
TC ++ NN + RV +++ TN DS+DPAL R GR D
Sbjct: 390 TCMDDLNNVA-ATARV--------------------LVIGATNRPDSLDPALRRAGRFDR 428
Query: 388 HVSLG 392
+ LG
Sbjct: 429 EICLG 433
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 55/237 (23%)
Query: 181 GWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSG 240
G+V+VP T+ + +++++T + A + + +G G LL GPPG G
Sbjct: 571 GFVTVPN---VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 627
Query: 241 KSSLIAAMANYLCYDVYDLE----LTKVTDNSE--LRALLLQTTNRS--IIVIEDIDCSV 292
K+ L A+AN + ++ L SE +R + + N + +I +++D
Sbjct: 628 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 687
Query: 293 DLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFT 352
+DR E G+ + RV ++ LL
Sbjct: 688 PRRSDR--------------------ETGASV-----------------RV-VNQLLTEM 709
Query: 353 DGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP----HAFKVLAKN 405
DGL + ++ I+ TN D +DPA++R GR+D + +G P K + KN
Sbjct: 710 DGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKN 764
>sp|Q5UPR4|YR776_MIMIV Uncharacterized protein R776 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R776 PE=4 SV=1
Length = 314
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 138 PKRHRQT-LLSAYLDHVTSRAEEFERVSRERRLFTNNGHGSYDSGWVSVPFRHPSTFETL 196
P+ +QT L ++D V S + R R +T+N ++ W R P F
Sbjct: 119 PQIKKQTNRLKKFIDSVHSISC---RPDEMRMCYTSN-----NNNWSYPIIRRPCKFLDS 170
Query: 197 ALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDV 256
L +++ + +D+ F ++ Y +G ++RG LLYG G GK+ LI+ ++N D
Sbjct: 171 NLTTEMR-SVLKDVDVFMRNEDTYRELGANYRRGMLLYGESGCGKTGLISIISNKYGMDS 229
Query: 257 YDLEL-TKVTDNSELRALLLQTTNRSIIVIEDIDCSVD 293
Y L L +K +S L +L RSI+VIE+ID ++
Sbjct: 230 YILNLNSKDMSDSVLISLASNVKARSILVIEEIDKQIE 267
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 42/184 (22%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKV------TDNSELR 271
E + ++G G L +GPPG GK+ L A+AN Y + T+V +R
Sbjct: 257 EPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIR 316
Query: 272 ALLLQT--TNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASS-- 327
L + T SI+ I++ID +KR + +EM RI +
Sbjct: 317 ELFSKAYRTAPSIVFIDEIDA------------------IGSKRENQQREMEKRIVTQLL 358
Query: 328 TCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDV 387
TC + N G+++ + +G + +++ TN D++DPAL R GR +
Sbjct: 359 TCMDGPGNKGDKNAPDSSAGFV--------------LVIGATNRPDALDPALRRSGRFET 404
Query: 388 HVSL 391
++L
Sbjct: 405 EIAL 408
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 48/214 (22%)
Query: 188 RHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAA 247
R TF +A E + K ++ + + F YHR+G RG LL GPPG+GK+ L A
Sbjct: 245 RPQVTFADVAGEEEAKAELAQ-VVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARA 303
Query: 248 MANYLCYDVYDLELTKVTD------NSELRALLLQTTNR--SIIVIEDIDCSVDLTADRM 299
+A + + ++ + S +R L + + SII I+++D
Sbjct: 304 VAGEAGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDA--------- 354
Query: 300 LKSSNTSTTAKTKRSSSIKEMG-SRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSC 358
+G R A GN+ TL+ LL DG +
Sbjct: 355 --------------------VGRQRFAGLGVGNDEREQ-------TLNQLLVEMDGFEAH 387
Query: 359 CSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
+ +++ TN D +DPAL+R GR D V +G
Sbjct: 388 T--DVVVIAATNRPDVLDPALLRPGRFDRQVVVG 419
>sp|A6LD25|FTSH_PARD8 ATP-dependent zinc metalloprotease FtsH OS=Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
GN=ftsH PE=3 SV=1
Length = 684
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 85/210 (40%), Gaps = 47/210 (22%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
TF+ +A + K+++ E++ +F E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 194 TFKDVAGLAEAKQEV-EEIVSFLKNPEKYTELGGKIPKGALLVGPPGTGKTLLAKAVAGE 252
Query: 252 LCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDIDCSVDLTADRMLKSS 303
+ L E+ S +R L Q +S I+ I++ID
Sbjct: 253 ANVPFFSLSGSDFVEMFVGVGASRVRDLFRQAKEKSPCIVFIDEIDA------------- 299
Query: 304 NTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEK 363
G N N N + TL+ LL DG S
Sbjct: 300 ---------------------VGRARGKNANMNSNDERENTLNQLLTEMDGFGSNSG--V 336
Query: 364 IIVFTTNHRDSVDPALIRCGRMD--VHVSL 391
II+ TN D +D AL+R GR D +HV L
Sbjct: 337 IILAATNRADILDKALLRAGRFDRQIHVEL 366
>sp|O34703|YJOB_BACSU Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168)
GN=yjoB PE=1 SV=1
Length = 423
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 196 LALEPQLKKQITEDLTAFANG-KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCY 254
+ + P LKK+I + F + K FY +KRG LLYGPPG+GK++L+ ++A +
Sbjct: 187 VIMNPLLKKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDA 246
Query: 255 DVYDLELTKVTDNSELRALLLQTTNR---SIIVIEDIDC 290
V ++T+ T +SE + Q R +++VIEDID
Sbjct: 247 PVAYWQITEFT-SSETIEEVFQAARRLAPAVLVIEDIDS 284
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 49/185 (26%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE----LTKVTDNSE--LR 271
E Y +G RG LL+GPPG GK+ L A+A L + + ++ V+ SE LR
Sbjct: 287 EVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLR 346
Query: 272 ALLLQTTNRS--IIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASS-- 327
L Q + + I+ I++ID KR + K+M RI +
Sbjct: 347 ELFDQAVSNAPCIVFIDEID------------------AITPKREVASKDMERRIVAQLL 388
Query: 328 TCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDV 387
TC ++ NN + RV +++ TN DS+DPAL R GR D
Sbjct: 389 TCMDDLNNVA-ATARV--------------------LVIGATNRPDSLDPALRRAGRFDR 427
Query: 388 HVSLG 392
V LG
Sbjct: 428 EVCLG 432
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 55/237 (23%)
Query: 181 GWVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSG 240
G+V+VP T+ + ++ ++ + A + + +G G LL GPPG G
Sbjct: 570 GFVTVPN---VTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCG 626
Query: 241 KSSLIAAMANYLCYDVYDLE----LTKVTDNSE--LRALLLQTTNRS--IIVIEDIDCSV 292
K+ L A+AN + ++ L SE +R + + N + +I +++D
Sbjct: 627 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 686
Query: 293 DLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFT 352
+DR E G+ + RV ++ LL
Sbjct: 687 PRRSDR--------------------ETGASV-----------------RV-VNQLLTEM 708
Query: 353 DGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP----HAFKVLAKN 405
DGL + ++ I+ TN D +DPA++R GR+D + +G P K + KN
Sbjct: 709 DGLET--RQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKN 763
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 85/223 (38%), Gaps = 75/223 (33%)
Query: 182 WVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGK 241
V +P RHP F+++ ++P RG L+YGPPG+GK
Sbjct: 240 LVELPLRHPQLFKSIGIKP---------------------------PRGILMYGPPGTGK 272
Query: 242 SSLIAAMANYLCYDVYDLE----LTKVTDNSE--LRALLLQTTNRS--IIVIEDIDCSVD 293
+ + A+AN + + ++K+ SE LR + S II I++ID
Sbjct: 273 TLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEID---- 328
Query: 294 LTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTD 353
S NGE RV +S LL D
Sbjct: 329 ---------------------------------SIAPKREKTNGEVERRV-VSQLLTLMD 354
Query: 354 GLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGP 396
G+ + + +++ TN +S+DPAL R GR D V +G P
Sbjct: 355 GMKARSN--VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDP 395
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE 260
++K+++ E + + E + + G + RG L YGPPG+GK+ L A+AN + ++
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 565
Query: 261 LTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEM 320
EL ++ + + I DI A ++ + AK++
Sbjct: 566 ------GPELLSMWFGESESN---IRDIFDKARAAAPCVVFLDELDSIAKSR-------- 608
Query: 321 GSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALI 380
G + + G S RV ++ LL DG+ S + ++ TN + +D AL+
Sbjct: 609 ---------GGSVGDAGGASDRV-VNQLLTEMDGMTS--KKNVFVIGATNRPEQLDAALV 656
Query: 381 RCGRMD--VHVSL 391
R GR+D V+V L
Sbjct: 657 RPGRLDTLVYVPL 669
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 48/210 (22%)
Query: 192 TFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANY 251
TF +A E + K +++E + F YH +G RG LL GPPG+GK+ L A+A
Sbjct: 201 TFADVAGEEEAKAELSE-VVDFLRNPMKYHAIGARLPRGILLVGPPGTGKTLLARAVAGE 259
Query: 252 LCYDVYDLELTKVTD------NSELRALL--LQTTNRSIIVIEDIDCSVDLTADRMLKSS 303
+ + ++ + S +R L + + SI+ ++++D
Sbjct: 260 AGVPFFSVSASEFVEMFVGVGASRVRDLFERAKASAPSIMFVDELDA------------- 306
Query: 304 NTSTTAKTKRSSSIKEMG-SRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEE 362
+G R A GN+ TL+ LL DG ++
Sbjct: 307 ----------------VGRQRFAGLGGGNDEREQ-------TLNQLLVEMDGF--EPHQD 341
Query: 363 KIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
I++ TN D +DPAL+R GR D V++G
Sbjct: 342 VIVIAATNRPDVLDPALLRPGRFDRQVTVG 371
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 45/215 (20%)
Query: 186 PFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLI 245
P P TF +A ++K ++ E++ + + Y +G +G LLYGPPG+GK+ L
Sbjct: 144 PGESPVTFADVAGMDEVKGEL-EEIVDYLKNPDKYRAIGARIPKGVLLYGPPGTGKTLLA 202
Query: 246 AAMANYLCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDIDCSVDLTAD 297
A+A + L EL S +R L Q + I+ I++ID
Sbjct: 203 RAVAGEAGVPFFALSGSSFVELFVGMGASRVRELFAQARKNAPCIVFIDEIDA------- 255
Query: 298 RMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWS 357
+R S A+ G++ TL+ LL DG
Sbjct: 256 -----------VGRQRGS---------AAVVGGHDEREQ-------TLNQLLTEMDGF-- 286
Query: 358 CCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLG 392
E I++ TN D +D AL+R GR D + +G
Sbjct: 287 GAYEGVIVMAATNRPDVLDKALLRPGRFDRQIPVG 321
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 83/208 (39%), Gaps = 48/208 (23%)
Query: 219 FYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDN--SELRALLLQ 276
+ G + RG LL+GPPG+GK+ L+ +AN V + + E A L
Sbjct: 270 LFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRD 329
Query: 277 TTNR------SIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCG 330
N SII I++ID S
Sbjct: 330 IFNEARKYQPSIIFIDEID------------------------------------SIAPN 353
Query: 331 NNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVS 390
N+++GE RV ++ LL DG+ + + +++ TN +SVDPAL R GR D V
Sbjct: 354 RANDDSGEVESRV-VATLLTLMDGMGAAG--KVVVIAATNRPNSVDPALRRPGRFDQEVE 410
Query: 391 LGTCGPHA-FKVLAKNYLGIESHHALFD 417
+G A F +L K + + S + D
Sbjct: 411 IGIPDVDARFDILTKQFSRMSSDRHVLD 438
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 50/201 (24%)
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA-----NYLCYD 255
+LK ++ E + E + R+G + +G LLYGPPG K+ A+A N+L
Sbjct: 523 ELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVK 582
Query: 256 VYDLELTKVTDNSE--LRALL--LQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKT 311
++ K SE +R + ++ SII ++ID L+ DR
Sbjct: 583 GPEI-FNKYVGESERAIREIFRKARSAAPSIIFFDEIDA---LSPDRD------------ 626
Query: 312 KRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNH 371
SST N+ L+ LLN DG+ + +IV TN
Sbjct: 627 -------------GSSTSAANH----------VLTSLLNEIDGVEEL--KGVVIVAATNR 661
Query: 372 RDSVDPALIRCGRMDVHVSLG 392
D +D AL+R GR+D H+ +G
Sbjct: 662 PDEIDAALLRPGRLDRHIYVG 682
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 47/198 (23%)
Query: 204 KQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTK 263
K I E + E + G RG LLYGPPG+GK+ + A+AN + V + +
Sbjct: 363 KAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPE 422
Query: 264 VTDN------SELRALLLQTTNR--SIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSS 315
+ + LR + + T R SII I+++D KR
Sbjct: 423 IISKFYGETEARLRQIFAEATLRHPSIIFIDELDALC------------------PKREG 464
Query: 316 SIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVF-TTNHRDS 374
+ E+ R+ +S LL DG+ S SE +++V TN +
Sbjct: 465 AQSEVEKRVVAS--------------------LLTLMDGIGSEGSEGRVLVLGATNRPQA 504
Query: 375 VDPALIRCGRMDVHVSLG 392
+D AL R GR D + +G
Sbjct: 505 LDAALRRPGRFDKEIEIG 522
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 50/183 (27%)
Query: 220 YHRVGRAWKRGYLLYGPPGSGKSSLIAAMA-----NYLCYDVYDLELTKVTDNSE--LRA 272
++R+G +G LLYGPPG K+ + A+A N+L +L + K SE +R
Sbjct: 653 FNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL-MNKYVGESERAVRE 711
Query: 273 LL--LQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCG 330
+ + SII +++D L +R GS SS G
Sbjct: 712 IFRKARAVAPSIIFFDELDA---LAVER----------------------GS---SSGAG 743
Query: 331 NNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMD--VH 388
N + L+ LL DG+ + ++ TN D +D AL+R GR+D ++
Sbjct: 744 NVADR--------VLAQLLTEMDGIEQL--KNVTVLAATNRPDRIDKALMRPGRIDRIIY 793
Query: 389 VSL 391
V L
Sbjct: 794 VPL 796
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 46/212 (21%)
Query: 188 RHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAA 247
R TF+ +A ++K+++ E + F + Y +G +G LLYGPPG+GK+ L A
Sbjct: 151 RKRVTFDDVAGIDEVKEELAE-IVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKA 209
Query: 248 MANYLCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDIDCSVDLTADRM 299
+A + + E+ S +R L Q S I+ I++ID
Sbjct: 210 VAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDA--------- 260
Query: 300 LKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCC 359
+G + + G ++ TL+ LL DG
Sbjct: 261 --------------------VGRQRGAGYGGGHDEREQ------TLNQLLVEMDGF--SA 292
Query: 360 SEEKIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
+E II+ TN D +DPAL+R GR D + +
Sbjct: 293 NEGIIIIAATNRPDVLDPALLRPGRFDRQIVI 324
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 75/220 (34%)
Query: 182 WVSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGK 241
+ +P RHP FE L +EP +G LL GPPG+GK
Sbjct: 194 MIELPMRHPELFEKLGIEPP---------------------------KGVLLVGPPGTGK 226
Query: 242 SSLIAAMANYLCYDVYDLE----LTKVTDNSE--LRALLLQTTNR--SIIVIEDIDCSVD 293
+ L A+AN + Y + ++K +E LR + + SII I++ID
Sbjct: 227 TLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIA- 285
Query: 294 LTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTD 353
KR + E+ R+ + LL D
Sbjct: 286 -----------------PKRDEATGEVERRLVAQ--------------------LLTLMD 308
Query: 354 GLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGT 393
GL + +++ TN +++DPAL R GR D + +G
Sbjct: 309 GLKGRG--QVVVIGATNRPNALDPALRRPGRFDREIVIGV 346
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 47/194 (24%)
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE 260
++K+++ E + KE + ++G +G LL+GPPG+GK+ L A+AN + ++
Sbjct: 459 EVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVK 518
Query: 261 ----LTKVTDNSE--LRALLLQTTNRS--IIVIEDIDCSVDLTADRMLKSSNTSTTAKTK 312
+K SE +R + + + II ++ID A + + +++ T K
Sbjct: 519 GPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDA----IAPKRGRDLSSAVTDK-- 572
Query: 313 RSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHR 372
++ LL DG+ ++ +++ TN
Sbjct: 573 -------------------------------VVNQLLTELDGMEE--PKDVVVIAATNRP 599
Query: 373 DSVDPALIRCGRMD 386
D +DPAL+R GR+D
Sbjct: 600 DIIDPALLRPGRLD 613
>sp|A0QFB2|ARC_MYCA1 Proteasome-associated ATPase OS=Mycobacterium avium (strain 104)
GN=mpa PE=3 SV=2
Length = 609
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAREAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYLGIESHHALFDVVE------SCIRA 425
A + + YL E D+ E +CI+A
Sbjct: 441 DAEAAQDIFSKYLTEELPLHADDLAEFGGDRTACIKA 477
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 47/205 (22%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST++ + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 193 STYQMIGGLDEQIK-EIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVA 251
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDIDCSVDLTADRMLK 301
++ C V EL + + + S L R L + SII +++ID
Sbjct: 252 HHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDS----------- 300
Query: 302 SSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSE 361
ST G++N + E R L LLN DG S
Sbjct: 301 -----------------------IGSTRGDSNKGSDSEVQRTMLE-LLNQLDGFES--HN 334
Query: 362 EKIIVFTTNHRDSVDPALIRCGRMD 386
++ TN D +DPAL+R GR+D
Sbjct: 335 NIKVIMATNRIDILDPALLRTGRID 359
>sp|B2HFW2|ARC_MYCMM Proteasome-associated ATPase OS=Mycobacterium marinum (strain ATCC
BAA-535 / M) GN=mpa PE=3 SV=1
Length = 609
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D+ E ++ L
Sbjct: 275 KELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDSREAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|A0PQT9|ARC_MYCUA Proteasome-associated ATPase OS=Mycobacterium ulcerans (strain
Agy99) GN=mpa PE=3 SV=1
Length = 609
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D+ E ++ L
Sbjct: 275 KELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDSREAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|P46509|ARC_MYCLE Proteasome-associated ATPase OS=Mycobacterium leprae (strain TN)
GN=mpa PE=3 SV=1
Length = 609
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAREAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|B8ZRF0|ARC_MYCLB Proteasome-associated ATPase OS=Mycobacterium leprae (strain
Br4923) GN=mpa PE=3 SV=1
Length = 609
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAREAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU08_1970 PE=1 SV=1
Length = 387
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 37/193 (19%)
Query: 203 KKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELT 262
K++I E + + Y ++G +G LLYGPPG+GK+ L+ A+AN+ T
Sbjct: 143 KQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANH----------T 192
Query: 263 KVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGS 322
K T N S V + + RM++ K I E+ S
Sbjct: 193 KAT---------FIRVNGSEFVQKYLG-----EGPRMVRDVFRLAREKAPSIVFIDEVDS 238
Query: 323 ----RIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPA 378
R +ST + E RV + LLN DG + + ++ TN D++DPA
Sbjct: 239 IATKRFDASTSADR------EVQRVLIE-LLNQMDGFDPAANVK--VIMATNRADTIDPA 289
Query: 379 LIRCGRMDVHVSL 391
L+R GR+D +
Sbjct: 290 LLRPGRLDRKIEF 302
>sp|B1MAH2|ARC_MYCA9 Proteasome-associated ATPase OS=Mycobacterium abscessus (strain
ATCC 19977 / DSM 44196) GN=mpa PE=3 SV=1
Length = 602
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
K+ Y +G LLYGPPG GK+ + A+AN L + +L + D+ E ++ L
Sbjct: 268 KDLYQEYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEL---RGDDSREAKSYFLN 324
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 325 IKGPELLNKFVGETERHIRLIFQRAREKASDGTPVIV----FFDEMDSIFRTRGTGVSSD 380
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 381 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 433
Query: 395 GPHAFKVLAKNYLGIE 410
+ + + YL ++
Sbjct: 434 DAESAQDIFSKYLTVD 449
>sp|C1ASQ2|ARC_RHOOB Proteasome-associated ATPase OS=Rhodococcus opacus (strain B4)
GN=arc PE=3 SV=1
Length = 591
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
K+ +H +G LLYGPPG GK+ + A+AN L + + + D+ E ++ L
Sbjct: 257 KDLFHEYELRPPKGVLLYGPPGCGKTLIAKAVANSLAKKIAE---ARGQDSKEAKSYFLN 313
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 314 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGSGVSSD 369
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 370 VET-----TVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 422
Query: 395 GPHAFKVLAKNYL 407
+ + + YL
Sbjct: 423 DAESAQDIFSKYL 435
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 48/184 (26%)
Query: 218 EFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE----LTKVTDNSE--LR 271
+ Y ++G +G LLYGPPG+GK+ + A+AN ++ + ++K+ SE LR
Sbjct: 232 QLYSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLR 291
Query: 272 ALLLQTTNRS--IIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTC 329
+ S II I++ID KR S E+ RI S
Sbjct: 292 KAFEEAEKNSPAIIFIDEIDA------------------LAPKREKSQGEVERRIVSQ-- 331
Query: 330 GNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHV 389
LL DG+ + + I++ TN +S+DPAL R GR D +
Sbjct: 332 ------------------LLTLMDGMKARSN--VIVLGATNRPNSIDPALRRYGRFDREI 371
Query: 390 SLGT 393
+G
Sbjct: 372 EIGV 375
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 48/201 (23%)
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAM-----ANYLCYD 255
Q+K+++ E + E + + G +G L YGPPG GK+ L A+ AN++
Sbjct: 488 QVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIK 547
Query: 256 VYDLELTKVTDN-SELRALLLQTTNRS--IIVIEDIDCSVDLTADRMLKSSNTSTTAKTK 312
+L V ++ S +R L + + ++ ++ID
Sbjct: 548 GPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDS---------------------- 585
Query: 313 RSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHR 372
IA + GN+ ++ + L+ LL+ DG+ + ++ TN
Sbjct: 586 -----------IAKARSGNDGSSGATDR---MLNQLLSEMDGINQ--KKNVFVIGATNRP 629
Query: 373 DSVDPALIRCGRMD--VHVSL 391
D +D AL+R GR+D V++ L
Sbjct: 630 DQLDSALMRPGRLDQLVYIPL 650
>sp|Q0SIF4|ARC_RHOSR Proteasome-associated ATPase OS=Rhodococcus sp. (strain RHA1)
GN=arc PE=3 SV=1
Length = 591
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
K+ +H +G LLYGPPG GK+ + A+AN L + + + D+ E ++ L
Sbjct: 257 KDLFHEYELRPPKGVLLYGPPGCGKTLIAKAVANSLAKKIAE---ARGQDSKEAKSYFLN 313
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 314 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGSGVSSD 369
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 370 VET-----TVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 422
Query: 395 GPHAFKVLAKNYL 407
+ + + YL
Sbjct: 423 DAESAQDIFSKYL 435
>sp|P63345|ARC_MYCTU Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa
PE=1 SV=1
Length = 609
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAHEAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|C6DPU6|ARC_MYCTK Proteasome-associated ATPase OS=Mycobacterium tuberculosis (strain
KZN 1435 / MDR) GN=mpa PE=3 SV=1
Length = 609
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAHEAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|A5WP89|ARC_MYCTF Proteasome-associated ATPase OS=Mycobacterium tuberculosis (strain
F11) GN=mpa PE=3 SV=1
Length = 609
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAHEAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|A5U4E1|ARC_MYCTA Proteasome-associated ATPase OS=Mycobacterium tuberculosis (strain
ATCC 25177 / H37Ra) GN=mpa PE=3 SV=1
Length = 609
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAHEAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|C1AQ31|ARC_MYCBT Proteasome-associated ATPase OS=Mycobacterium bovis (strain BCG /
Tokyo 172 / ATCC 35737 / TMC 1019) GN=mpa PE=3 SV=1
Length = 609
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAHEAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|A1KKF8|ARC_MYCBP Proteasome-associated ATPase OS=Mycobacterium bovis (strain BCG /
Pasteur 1173P2) GN=mpa PE=3 SV=1
Length = 609
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAHEAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|P63346|ARC_MYCBO Proteasome-associated ATPase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mpa PE=3 SV=1
Length = 609
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 217 KEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQ 276
KE Y +G LLYGPPG GK+ + A+AN L + ++ + D E ++ L
Sbjct: 275 KELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV---RGDDAHEAKSYFLN 331
Query: 277 TTNRSII--VIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNN 334
++ + + + + L R + ++ T EM S + G +++
Sbjct: 332 IKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIV----FFDEMDSIFRTRGTGVSSD 387
Query: 335 NNGEESGRVTLSGLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTC 394
+ LL+ DG+ E I++ +N D +DPA++R GR+DV + +
Sbjct: 388 VE-----TTVVPQLLSEIDGVEGL--ENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
Query: 395 GPHAFKVLAKNYL 407
A + + YL
Sbjct: 441 DAEAAQDIYSKYL 453
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 45/209 (21%)
Query: 189 HPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAM 248
H TF+ +A + K+++ E + N K+F R+G +G LL GPPG+GK+ L A+
Sbjct: 206 HRVTFKDVAGLDEAKEEVAEIVEFLKNPKKF-TRLGGKLPKGVLLVGPPGTGKTLLAKAV 264
Query: 249 ANYLCYDVYDL------ELTKVTDNSELRALLLQTTNRS--IIVIEDIDCSVDLTADRML 300
A + + E+ + +R L Q ++ II I++ID
Sbjct: 265 AGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDA---------- 314
Query: 301 KSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCS 360
R I MG+ N+ N TL+ LL DG
Sbjct: 315 --------IGRSRGRGIM-MGA--------NDEREN-------TLNQLLVEMDGF--NTD 348
Query: 361 EEKIIVFTTNHRDSVDPALIRCGRMDVHV 389
+ II+ TN D +DPAL+R GR D +
Sbjct: 349 KGVIIMAATNRPDVLDPALLRPGRFDRQI 377
>sp|C9Z319|ARC_STRSW Proteasome-associated ATPase OS=Streptomyces scabies (strain 87.22)
GN=arc PE=3 SV=2
Length = 588
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 229 RGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNRSII--VIE 286
+G LLYGPPG GK+ + A+AN L V +VT ++ ++ L ++ +
Sbjct: 267 KGVLLYGPPGCGKTLIAKAVANSLAKKV-----AEVTGQAQGKSFFLNIKGPELLNKYVG 321
Query: 287 DIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLS 346
+ + + L R + ++ T EM S T G+ +++ E + L
Sbjct: 322 ETERQIRLVFQRAREKASEGTPVIV----FFDEMESLF--RTRGSGVSSDVENTIVPQLL 375
Query: 347 GLLNFTDGLWSCCSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNY 406
++ +GL + +++ +N D +DPA++R GR+DV + + A K + + Y
Sbjct: 376 AEIDGVEGLQNV-----VVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAKDIFQKY 430
Query: 407 L 407
L
Sbjct: 431 L 431
>sp|B7GUP3|ARC_BIFLS AAA ATPase forming ring-shaped complexes OS=Bifidobacterium longum
subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM
1222 / NCTC 11817 / S12) GN=arc PE=3 SV=1
Length = 521
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 50/242 (20%)
Query: 183 VSVPFRHPSTFETLALEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS 242
V +PFRH + FE L+P +G LLYGPPG+GK+
Sbjct: 207 VQLPFRHRALFERYDLKP---------------------------PKGVLLYGPPGNGKT 239
Query: 243 SLIAAMANYLCYDVYDLELTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKS 302
+ A+AN LC YD +E R ++ S+ E ++ V ++R+++
Sbjct: 240 MIAKAVANALCEGGYDSNGDGSISPAETR---VKGVFLSVKGPELLNKYVG-ESERLIRL 295
Query: 303 SNTSTTAKTKRSSS----IKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSC 358
+ + I EM S + T G+ +++ E + + L+ DG+ S
Sbjct: 296 IFQRARERAADGNPVVVFIDEMDSLL--RTRGSGVSSDVETT---IVPQFLSELDGVESL 350
Query: 359 CSEEKIIVFTTNHRDSVDPALIRCGRMDVHVSLGTCGPHAFKVLAKNYL--------GIE 410
+ +++ +N D +DPA++R GR+DV + +G + + +YL G++
Sbjct: 351 --DNVMVIGASNRVDMIDPAVLRPGRLDVKIRVGRPKTNQAIAIVDHYLTDDLPLENGVD 408
Query: 411 SH 412
+H
Sbjct: 409 AH 410
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 145 STYEMVGGLDKQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDIDCSVDLTADRMLK 301
++ C V EL + + + S + R L + SII +++ID
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID------------ 251
Query: 302 SSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSE 361
SI SRI S + G++ T+ LLN DG + +
Sbjct: 252 --------------SIG--SSRIESGSGGDSEVQR-------TMLELLNQLDGFEATKNI 288
Query: 362 EKIIVFTTNHRDSVDPALIRCGRMD 386
+ ++ TN D +DPAL+R GR+D
Sbjct: 289 K--VIMATNRIDILDPALLRPGRID 311
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 191 STFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA 249
ST+E + L+ Q+K +I E + E + +G A +G LLYGPPG+GK+ L A+A
Sbjct: 142 STYEMVGGLDKQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 200
Query: 250 NYL-C--YDVYDLELTK--VTDNSEL-RALLLQTTNR--SIIVIEDIDCSVDLTADRMLK 301
++ C V EL + + + S + R L + SII +++ID
Sbjct: 201 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID------------ 248
Query: 302 SSNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSE 361
SI SRI S + G++ T+ LLN DG + +
Sbjct: 249 --------------SIG--SSRIESGSGGDSEVQR-------TMLELLNQLDGFEATKNI 285
Query: 362 EKIIVFTTNHRDSVDPALIRCGRMD 386
+ ++ TN D +DPAL+R GR+D
Sbjct: 286 K--VIMATNRIDILDPALLRPGRID 308
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum
(isolate 3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 50/209 (23%)
Query: 192 TFETLA-LEPQLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMA- 249
T+E L ++ QL K I E + E + +G + +G L++G PG+GK+S+ A+A
Sbjct: 525 TYEDLGGMKKQLNK-IRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 250 --NYLCYDVYDLE-LTKVTDNSE--LRALLLQTTNRS--IIVIEDIDCSVDLTADRMLKS 302
N CY + E ++K SE LR + + + ++ II I++ID
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID------------- 630
Query: 303 SNTSTTAKTKRSSSIKEMGSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEE 362
+ KRS S E+ R+ S LL DGL +
Sbjct: 631 -----SIANKRSKSNNELEKRVVSQ--------------------LLTLMDGLKK--NNN 663
Query: 363 KIIVFTTNHRDSVDPALIRCGRMDVHVSL 391
+++ TN +S+DPAL R GR D + +
Sbjct: 664 VLVLAATNRPNSIDPALRRFGRFDREIEI 692
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 39/211 (18%)
Query: 201 QLKKQITEDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLE 260
++K+Q+ E + K Y++ + +G LLYGPPG GK+ L A+AN
Sbjct: 941 EVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN---------- 990
Query: 261 LTKVTDNSELRALLLQTTNRSIIVIEDIDCSVDLTADRMLKSSNTSTTAKTKRSSSIKEM 320
E +A + ++ + + ++ K + +S
Sbjct: 991 --------ECKANFISVKGPELLTMWFGESEANV----------RDLFDKARAASPCIIF 1032
Query: 321 GSRIASSTCGNNNNNNGEESGRVTLSGLLNFTDGLWSCCSEEK--IIVFTTNHRDSVDPA 378
I S N+N N + S RV ++ +L DG+ +E+K I+ TN D +D A
Sbjct: 1033 FDEIDSLAKERNSNTNNDASDRV-INQILTEIDGI----NEKKTIFIIAATNRPDILDKA 1087
Query: 379 LIRCGRMD--VHVSLGTCGPH--AFKVLAKN 405
L R GR+D +++SL FK + KN
Sbjct: 1088 LTRPGRLDKLIYISLPDLKSRYSIFKAILKN 1118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,812,964
Number of Sequences: 539616
Number of extensions: 8156509
Number of successful extensions: 40718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 39047
Number of HSP's gapped (non-prelim): 1883
length of query: 530
length of database: 191,569,459
effective HSP length: 122
effective length of query: 408
effective length of database: 125,736,307
effective search space: 51300413256
effective search space used: 51300413256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)