BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009644
(530 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 158/287 (55%), Gaps = 14/287 (4%)
Query: 226 QLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH-- 283
++ +++L+ ATNNF +IG G FG YKG+L+DG+ V +KR Q
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 284 -IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIAL 342
++ H HLV L+GFC+E ++ +LIY Y+ NGN++ HLY S+ LP ++ QRL I +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICI 146
Query: 343 GAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT---GSHHAGSTSAV 399
GAA+GL +LH+ + H ++ N+LL+EN+ K++D+G+ K T +H
Sbjct: 147 GAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 400 DCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNL---ILQVKRSCD 456
++DPE + + SDVYSFGV L E++ R A ++ NL ++ +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 457 LGKYVDKTLGEQTVGAATEMM-ELALQCVDVSSR-RPSMRQIAGELE 501
L + VD L ++ + + A++C+ +SS RPSM + +LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 158/287 (55%), Gaps = 14/287 (4%)
Query: 226 QLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH-- 283
++ +++L+ ATNNF +IG G FG YKG+L+DG+ V +KR Q
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 284 -IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIAL 342
++ H HLV L+GFC+E ++ +LIY Y+ NGN++ HLY S+ LP ++ QRL I +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICI 146
Query: 343 GAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT---GSHHAGSTSAV 399
GAA+GL +LH+ + H ++ N+LL+EN+ K++D+G+ K T +H
Sbjct: 147 GAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 400 DCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNL---ILQVKRSCD 456
++DPE + + SDVYSFGV L E++ R A ++ NL ++ +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 457 LGKYVDKTLGEQTVGAATEMM-ELALQCVDVSSR-RPSMRQIAGELE 501
L + VD L ++ + + A++C+ +SS RPSM + +LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 159/295 (53%), Gaps = 17/295 (5%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ----NFL 278
LK+ ++ EL+ A++NFS NI+G G FG YKG L DG+LV +KR + + Q F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS-EGLPIGKLTMRQR 337
EV+ I+ HR+L++L GFC ++LL+Y Y+ NG+V + L + E P RQR
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 338 LSIALGAAKGLEHLHS-LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAG 394
IALG+A+GL +LH P + H + +N+LL+E + A V D+GL KL+ H
Sbjct: 144 --IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 395 STSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAH--GRNHSNSDQNLILQVK 452
+ + PE + S +DV+ +GV LLELI+G+ A R ++ D L+ VK
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 453 ---RSCDLGKYVDKTL-GEQTVGAATEMMELALQCVDVSS-RRPSMRQIAGELEG 502
+ L VD L G +++++AL C S RP M ++ LEG
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 17/295 (5%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ----NFL 278
LK+ ++ EL+ A++NF NI+G G FG YKG L DG LV +KR + + Q F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS-EGLPIGKLTMRQR 337
EV+ I+ HR+L++L GFC ++LL+Y Y+ NG+V + L + E P RQR
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 338 LSIALGAAKGLEHLHS-LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAG 394
IALG+A+GL +LH P + H + +N+LL+E + A V D+GL KL+ H
Sbjct: 136 --IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 395 STSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAH--GRNHSNSDQNLILQVK 452
+ + PE + S +DV+ +GV LLELI+G+ A R ++ D L+ VK
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 453 ---RSCDLGKYVDKTL-GEQTVGAATEMMELALQCVDVSS-RRPSMRQIAGELEG 502
+ L VD L G +++++AL C S RP M ++ LEG
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 150/295 (50%), Gaps = 37/295 (12%)
Query: 227 LTILELKHATNNFSEI------NIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQI------ 274
+ ELK+ TNNF E N +GEG FG+ YKG + + ++ V K I
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 275 QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTM 334
Q F E+K +A+ H +LV+L+GF + L+Y Y+PNG++ + L +G P L+
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--PLSW 132
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-------LV 387
R IA GAA G+ LH H +++N+LL+E +TAK+SD+GL + V
Sbjct: 133 HMRCKIAQGAANGINFLHE--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 388 TGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNL 447
S G+T+ ++ PE L + SD+YSFGV LLE+I+G A + + L
Sbjct: 191 MXSRIVGTTA----YMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQL 242
Query: 448 IL-----QVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCV-DVSSRRPSMRQI 496
+L + Y+DK + + + M +A QC+ + ++RP ++++
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 149/295 (50%), Gaps = 37/295 (12%)
Query: 227 LTILELKHATNNFSEI------NIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQI------ 274
+ ELK+ TNNF E N +GEG FG+ YKG + + ++ V K I
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 275 QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTM 334
Q F E+K +A+ H +LV+L+GF + L+Y Y+PNG++ + L +G P L+
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--PLSW 132
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-------LV 387
R IA GAA G+ LH H +++N+LL+E +TAK+SD+GL + V
Sbjct: 133 HMRCKIAQGAANGINFLHE--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 388 TGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNL 447
G+T+ ++ PE L + SD+YSFGV LLE+I+G A + + L
Sbjct: 191 MXXRIVGTTA----YMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQL 242
Query: 448 IL-----QVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCV-DVSSRRPSMRQI 496
+L + Y+DK + + + M +A QC+ + ++RP ++++
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 149/295 (50%), Gaps = 37/295 (12%)
Query: 227 LTILELKHATNNFSEI------NIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQI------ 274
+ ELK+ TNNF E N +GEG FG+ YKG + + ++ V K I
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 275 QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTM 334
Q F E+K +A+ H +LV+L+GF + L+Y Y+PNG++ + L +G P L+
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--PLSW 126
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-------LV 387
R IA GAA G+ LH H +++N+LL+E +TAK+SD+GL + V
Sbjct: 127 HMRCKIAQGAANGINFLHE--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 388 TGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNL 447
G+T+ ++ PE L + SD+YSFGV LLE+I+G A + + L
Sbjct: 185 MXXRIVGTTA----YMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQL 236
Query: 448 IL-----QVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCV-DVSSRRPSMRQI 496
+L + Y+DK + + + M +A QC+ + ++RP ++++
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 37/295 (12%)
Query: 227 LTILELKHATNNFSEI------NIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQI------ 274
+ ELK+ TNNF E N GEG FG+ YKG + + ++ V K I
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 275 QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTM 334
Q F E+K A+ H +LV+L+GF + L+Y Y PNG++ + L +G P L+
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP--PLSW 123
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-------LV 387
R IA GAA G+ LH H +++N+LL+E +TAK+SD+GL + V
Sbjct: 124 HXRCKIAQGAANGINFLHE--NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 388 TGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNL 447
S G+T+ + PE L + SD+YSFGV LLE+I+G A + + L
Sbjct: 182 XXSRIVGTTA----YXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQL 233
Query: 448 IL-----QVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCV-DVSSRRPSMRQI 496
+L + Y+DK + + +A QC+ + ++RP ++++
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 12/208 (5%)
Query: 239 FSEINI---IGEGSFGLAYKGLLQDGSLVVIKRHLQT-----QIQNFLHEVKHIARVHHR 290
+ ++NI IG GSFG ++ GS V +K ++ ++ FL EV + R+ H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEH 350
++V +G + ++ +Y+ G++ L+ S +L R+RLS+A AKG+ +
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNY 152
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA-VDCFLDPELNL 409
LH+ PP+ H + ++ N+L+++ YT KV D+GL +L + + ++A ++ PE+
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 410 SKNYSAGSDVYSFGVFLLELISGREAHG 437
+ + SDVYSFGV L EL + ++ G
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWG 240
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 12/208 (5%)
Query: 239 FSEINI---IGEGSFGLAYKGLLQDGSLVVIKRHLQT-----QIQNFLHEVKHIARVHHR 290
+ ++NI IG GSFG ++ GS V +K ++ ++ FL EV + R+ H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEH 350
++V +G + ++ +Y+ G++ L+ S +L R+RLS+A AKG+ +
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNY 152
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA-VDCFLDPELNL 409
LH+ PP+ H ++ N+L+++ YT KV D+GL +L +A ++ PE+
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 410 SKNYSAGSDVYSFGVFLLELISGREAHG 437
+ + SDVYSFGV L EL + ++ G
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWG 240
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 26/268 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 20 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ SE K M++ + IA A+G+++LH+ + H
Sbjct: 79 KP-QLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHA--KSIIH 131
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPE---LNLSKNYS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE + S YS
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R + L +
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIEMVGRGS-----LSPDLSKVRSNCPK 244
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELE 501
M L +C+ RPS +I E+E
Sbjct: 245 RMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 26/268 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ SE K M++ + IA A+G+++LH+ + H
Sbjct: 91 KP-QLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHA--KSIIH 143
Query: 361 MHFRTSNVLLEENYTAKVSDYGLL---KLVTGSHHAGSTSAVDCFLDPE---LNLSKNYS 414
+++N+ L E+ T K+ D+GL +GSH S ++ PE + S YS
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R + L +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIEMVGRGS-----LSPDLSKVRSNCPK 256
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELE 501
M L +C+ RPS +I E+E
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 26/268 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
Q ++ + ++ +HL+ SE K M++ + IA A+G+++LH+ + H
Sbjct: 91 AP-QLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHA--KSIIH 143
Query: 361 MHFRTSNVLLEENYTAKVSDYGLL---KLVTGSHHAGSTSAVDCFLDPE---LNLSKNYS 414
+++N+ L E+ T K+ D+GL +GSH S ++ PE + S YS
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R + L +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIEMVGRGS-----LSPDLSKVRSNCPK 256
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELE 501
M L +C+ RPS +I E+E
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 24/270 (8%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
IG GSFG YKG V I + + Q Q F +EV + + H +++ +G+ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
++ + + + ++ HL+ E K M Q + IA A+G+++LH+ + H
Sbjct: 104 DNLAI-VTQWCEGSSLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHA--KNIIHR 156
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPE-LNLSKN--YSA 415
+++N+ L E T K+ D+GL + +GS + ++ PE + + N +S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 416 GSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAATE 475
SDVYS+G+ L EL++G + +H N+ +I V R Y L +
Sbjct: 217 QSDVYSYGIVLYELMTGELPY--SHINNRDQIIFMVGRG-----YASPDLSKLYKNCPKA 269
Query: 476 MMELALQCV-DVSSRRPSMRQIAGELEGIQ 504
M L CV V RP QI +E +Q
Sbjct: 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 27/279 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 18 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 77 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 129
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE+ ++ YS
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 190 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 242
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQEREIGRLH 512
M L +C+ RP QI +E + R + ++H
Sbjct: 243 AMKRLMAECLKKKRDERPLFPQILASIE-LLARSLPKIH 280
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 27/279 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 80 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 132
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE+ ++ YS
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 245
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQEREIGRLH 512
M L +C+ RP QI +E + R + ++H
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILASIE-LLARSLPKIH 283
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 27/279 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 43 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 102 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 154
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE+ ++ YS
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 215 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 267
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQEREIGRLH 512
M L +C+ RP QI +E + R + ++H
Sbjct: 268 AMKRLMAECLKKKRDERPLFPQILASIE-LLARSLPKIH 305
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 27/279 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 103 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 155
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE+ ++ YS
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 268
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQEREIGRLH 512
M L +C+ RP QI +E + R + ++H
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQILASIE-LLARSLPKIH 306
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 26/268 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 80 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 132
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE+ ++ YS
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 245
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELE 501
M L +C+ RP QI +E
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 26/268 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 75 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 127
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE+ ++ YS
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 240
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELE 501
M L +C+ RP QI +E
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
IG G FGL + G + V IK R ++F+ E + + ++ H LV+L G C E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
L+++++ +G + ++L GL L + L +G+ +L + H
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC--VIHRD 131
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGSDVY 420
N L+ EN KVSD+G+ + V + ST + PE+ YS+ SDV+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
SFGV + E+ S + N SNS+
Sbjct: 192 SFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
IG G FGL + G + V IK R ++F+ E + + ++ H LV+L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
L+++++ +G + ++L GL L + L +G+ +L + H
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC--VIHRD 128
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGSDVY 420
N L+ EN KVSD+G+ + V + ST + PE+ YS+ SDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
SFGV + E+ S + N SNS+
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
IG G FGL + G + V IK R ++F+ E + + ++ H LV+L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
L+++++ +G + ++L GL L + L +G+ +L + H
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEE--ASVIHRD 128
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGSDVY 420
N L+ EN KVSD+G+ + V + ST + PE+ YS+ SDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
SFGV + E+ S + N SNS+
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
IG G FGL + G + V IK R ++F+ E + + ++ H LV+L G C E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
L+++++ +G + ++L GL L + L +G+ +L + H
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC--VIHRD 126
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGSDVY 420
N L+ EN KVSD+G+ + V + ST + PE+ YS+ SDV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
SFGV + E+ S + N SNS+
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 27/279 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 36 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 95 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 147
Query: 361 MHFRTSNVLLEENYTAKVSDYGLL---KLVTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL +GSH S ++ PE+ ++ YS
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 208 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 260
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQEREIGRLH 512
M L +C+ RP QI +E + R + ++H
Sbjct: 261 AMKRLMAECLKKKRDERPLFPQILASIE-LLARSLPKIH 298
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 26/268 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 75 AP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 127
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKL---VTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL + +GSH S ++ PE+ ++ YS
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 240
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELE 501
M L +C+ RP QI +E
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 27/279 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 103 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 155
Query: 361 MHFRTSNVLLEENYTAKVSDYGLL---KLVTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL +GSH S ++ PE+ ++ YS
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 268
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQEREIGRLH 512
M L +C+ RP QI +E + R + ++H
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQILASIE-LLARSLPKIH 306
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 26/268 (9%)
Query: 245 IGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IG GSFG YKG G + V + Q+Q F +EV + + H +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ Q ++ + ++ +HL+ E K M + + IA A+G+++LH+ + H
Sbjct: 75 KP-QLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA--KSIIH 127
Query: 361 MHFRTSNVLLEENYTAKVSDYGLL---KLVTGSHHAGSTSAVDCFLDPELNLSKN---YS 414
+++N+ L E+ T K+ D+GL +GSH S ++ PE+ ++ YS
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
SDVY+FG+ L EL++G+ + N +N DQ +I V R Y+ L +
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYS-NINNRDQ-IIFMVGRG-----YLSPDLSKVRSNCPK 240
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELE 501
M L +C+ RP QI +E
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
IG G FGL + G + V IK R ++F+ E + + ++ H LV+L G C E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
L+ +++ +G + ++L GL L + L +G+ +L + H
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC--VIHRD 129
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGSDVY 420
N L+ EN KVSD+G+ + V + ST + PE+ YS+ SDV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
SFGV + E+ S + N SNS+
Sbjct: 190 SFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 238 NFSEINI---IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVK 294
++ EI + +G G+FG+ K + + + + +++ + F+ E++ ++RV+H ++VK
Sbjct: 7 DYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVK 66
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
L G C + L+ +Y G++ N L+ +E LP T +S L ++G+ +LHS+
Sbjct: 67 LYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPY--YTAAHAMSWCLQCSQGVAYLHSM 122
Query: 355 VP-PLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKN 412
P L H + N+LL T K+ D+G + H + ++ PE+ N
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI--QTHMTNNKGSAAWMAPEVFEGSN 180
Query: 413 YSAGSDVYSFGVFLLELISGRE 434
YS DV+S+G+ L E+I+ R+
Sbjct: 181 YSEKCDVFSWGIILWEVITRRK 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
IG G FGL + G + V IK + + +F+ E + + ++ H LV+L G C E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
L+++++ +G + ++L GL L + L +G+ +L + H
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC--VIHRD 148
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGSDVY 420
N L+ EN KVSD+G+ + V + ST + PE+ YS+ SDV+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
SFGV + E+ S + N SNS+
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 238 NFSEINI---IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVK 294
++ EI + +G G+FG+ K + + + + +++ + F+ E++ ++RV+H ++VK
Sbjct: 6 DYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVK 65
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
L G C + L+ +Y G++ N L+ +E LP T +S L ++G+ +LHS+
Sbjct: 66 LYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPY--YTAAHAMSWCLQCSQGVAYLHSM 121
Query: 355 VP-PLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKN 412
P L H + N+LL T K+ D+G + H + ++ PE+ N
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT--HMTNNKGSAAWMAPEVFEGSN 179
Query: 413 YSAGSDVYSFGVFLLELISGRE 434
YS DV+S+G+ L E+I+ R+
Sbjct: 180 YSEKCDVFSWGIILWEVITRRK 201
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 219 IDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQ 275
+ T+NL ++ + + + + + +G G +G Y G+ + SL V + L+ +++
Sbjct: 14 LGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE 73
Query: 276 NFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
FL E + + H +LV+L+G C ++ +Y+P GN+ ++L + + + +
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL- 132
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHH 392
L +A + +E+L H N L+ EN+ KV+D+GL +L+TG + H
Sbjct: 133 --LYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
Query: 393 AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
AG+ + + PE +S SDV++FGV L E+ +
Sbjct: 189 AGAKFPIK-WTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G FG Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 133
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-WTAPESLAYNKFSIKSD 192
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 214 GAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQ-- 271
GA+ P + + T + +KH +G G +G Y+G+ + SL V + L+
Sbjct: 1 GAMDPNYDKWEMERTDITMKHK---------LGGGQYGEVYEGVWKKYSLTVAVKTLKED 51
Query: 272 -TQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG 330
+++ FL E + + H +LV+L+G C +I +++ GN+ ++L + +
Sbjct: 52 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 111
Query: 331 KLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG- 389
+ + L +A + +E+L H N L+ EN+ KV+D+GL +L+TG
Sbjct: 112 AVVL---LYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
Query: 390 --SHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ HAG+ + + PE +S SDV++FGV L E+ +
Sbjct: 167 TYTAHAGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 133
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK-WTAPESLAYNKFSIKSD 192
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 133
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-WTAPESLAYNKFSIKSD 192
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 135
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 194
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 136
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-WTAPESLAYNKFSIKSD 195
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 135
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 194
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 140
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 199
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 140
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 199
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 140
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-WTAPESLAYNKFSIKSD 199
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 135
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 194
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 140
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 199
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 140
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 199
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 139
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 198
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 199 VWAFGVLLWEIAT 211
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 135
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 194
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 135
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 194
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 137
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 196
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 148
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 207
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 208 VWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 135
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 194
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEK--KNFIHR 342
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
+ N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 401
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 402 VWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 339
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
+ N L+ EN+ KV+D+GL +L+TG + HAG+ + + PE +S SD
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSD 398
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 399 VWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 21/223 (9%)
Query: 215 AVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQ--- 271
VSP + + T + +KH +G G +G Y+G+ + SL V + L+
Sbjct: 246 GVSPNYDKWEMERTDITMKHK---------LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT 296
Query: 272 TQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGK 331
+++ FL E + + H +LV+L+G C +I +++ GN+ ++L + +
Sbjct: 297 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 356
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-- 389
+ + L +A + +E+L H + N L+ EN+ KV+D+GL +L+TG
Sbjct: 357 VVL---LYMATQISSAMEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 411
Query: 390 -SHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ HAG+ + + PE +S SDV++FGV L E+ +
Sbjct: 412 YTAHAGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 120/278 (43%), Gaps = 50/278 (17%)
Query: 245 IGEGSFGLAYKGLL------QDGSLVVIKRHLQTQIQN----FLHEVKHIARVHHRHLVK 294
+GEG+FG + QD LV +K L+ N F E + + + H H+VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKT-LKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYD--------SEGLPIGKLTMRQRLSIALGAAK 346
G C E +++++Y+ +G++ L +EG P +LT Q L IA A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCFL 403
G+ +L S H T N L+ EN K+ D+G+ + V + + G T ++
Sbjct: 140 GMVYLAS--QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD------QNLILQVKRSCDL 457
PE + + ++ SDV+S GV L E+ + + SN++ Q +LQ R+C
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC-- 255
Query: 458 GKYVDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQ 495
E+ EL L C R P MR+
Sbjct: 256 ---------------PQEVYELMLGC---WQREPHMRK 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 243 NIIGEGSFGLAYKGLLQDGS-----LVVIKR----HLQTQIQNFLHEVKHIARVHHRHLV 293
+IG G FG YKG+L+ S V IK + + Q +FL E + + H +++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
+L G + ++I +Y+ NG + L + + G+ ++ Q + + G A G+++L +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNL 409
+ H N+L+ N KVSD+GL +++ A T++ + PE
Sbjct: 166 M--NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
+ +++ SDV+SFG+ + E+++
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 136
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + AG+ + + PE +S SD
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-WTAPESLAYNKFSIKSD 195
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ---TQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G +G Y+G+ + SL V + L+ +++ FL E + + H +LV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +++ GN+ ++L + + + + L +A + +E+L H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEK--KNFIHR 137
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ EN+ KV+D+GL +L+TG + AG+ + + PE +S SD
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-WTAPESLAYNKFSIKSD 196
Query: 419 VYSFGVFLLELIS 431
V++FGV L E+ +
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 245 IGEGSFGLAY----KGLL--QDGSLVVIK---RHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+GEG+FG + LL QD LV +K ++ Q+F E + + + H+H+V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYD----------SEGLPIGKLTMRQRLSIALGAA 345
G C E L++++Y+ +G++ L E + G L + Q L++A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCF 402
G+ +L L H T N L+ + K+ D+G+ + + + + G T +
Sbjct: 146 AGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD------QNLILQVKRSC 455
+ PE L + ++ SDV+SFGV L E+ + + SN++ Q L+ R+C
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 262
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 245 IGEGSFGLAY----KGLL--QDGSLVVIK---RHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+GEG+FG + LL QD LV +K ++ Q+F E + + + H+H+V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYD----------SEGLPIGKLTMRQRLSIALGAA 345
G C E L++++Y+ +G++ L E + G L + Q L++A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCF 402
G+ +L L H T N L+ + K+ D+G+ + + + + G T +
Sbjct: 169 AGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD------QNLILQVKRSC 455
+ PE L + ++ SDV+SFGV L E+ + + SN++ Q L+ R+C
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 285
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 245 IGEGSFGLAY----KGLL--QDGSLVVIK---RHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+GEG+FG + LL QD LV +K ++ Q+F E + + + H+H+V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYD----------SEGLPIGKLTMRQRLSIALGAA 345
G C E L++++Y+ +G++ L E + G L + Q L++A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCF 402
G+ +L L H T N L+ + K+ D+G+ + + + + G T +
Sbjct: 140 AGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD------QNLILQVKRSC 455
+ PE L + ++ SDV+SFGV L E+ + + SN++ Q L+ R+C
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 256
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 229 ILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRH-----LQTQIQNFLHEVK 282
+LE+ A EI IG G FG Y+ + D V RH + I+N E K
Sbjct: 1 LLEIDFAELTLEEI--IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAK 58
Query: 283 HIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIAL 342
A + H +++ L G C + L+ ++ G + N + + +P L ++ A+
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDIL-----VNWAV 112
Query: 343 GAAKGLEHLHS-LVPPLFHMHFRTSNVLLEE--------NYTAKVSDYGLLKLVTGSHHA 393
A+G+ +LH + P+ H ++SN+L+ + N K++D+GL + H
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRT 169
Query: 394 GSTSAVDCF--LDPELNLSKNYSAGSDVYSFGVFLLELISG 432
SA + + PE+ + +S GSDV+S+GV L EL++G
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 243 NIIGEGSFGLAYKGLL----QDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVK 294
IIG G G G L Q V IK + + Q ++FL E + + H ++++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
L G +++ +Y+ NG++ L + G+ T+ Q + + G G+ +L L
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNLS 410
H NVL++ N KVSD+GL +++ A T+ + PE
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF 228
Query: 411 KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+ +S+ SDV+SFGV + E+++ E N +N D
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 136/304 (44%), Gaps = 42/304 (13%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHL-----QTQIQNFLHEVKHIARVHHRHLVKLVGF 298
++G+G FG A K ++ V++ + L +TQ + FL EVK + + H +++K +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-RTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 299 CEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPL 358
++ + I +YI G ++ + + + QR+S A A G+ +LHS+ +
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHSM--NI 129
Query: 359 FHMHFRTSNVLLEENYTAKVSDYGLLKLV----TGSHHAGSTSAVD-----------CFL 403
H + N L+ EN V+D+GL +L+ T S D ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDK 463
PE+ ++Y DV+SFG+ L E+I GR +++ D + R+ D G V
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII------GRVNADPD-----YLPRTMDFGLNVRG 238
Query: 464 TLGEQT-VGAATEMMELALQCVDVS-SRRPSMRQIAGELEGIQEREIGRLHSEFGEEIDA 521
L + ++C D+ +RPS ++ LE ++ G H G +++
Sbjct: 239 FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG--HLPLGPQLEQ 296
Query: 522 VKLG 525
+ G
Sbjct: 297 LDRG 300
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 243 NIIGEGSFGLAYKGLL----QDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVK 294
IIG G G G L Q V IK + + Q ++FL E + + H ++++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
L G +++ +Y+ NG++ L + G+ T+ Q + + G G+ +L L
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNLS 410
H NVL++ N KVSD+GL +++ A T+ + PE
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228
Query: 411 KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTV 470
+ +S+ SDV+SFGV + E+++ E N +N D +I V+ L +
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEGYRL---------PAPM 277
Query: 471 GAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
G + +L L C ++RP QI L+ +
Sbjct: 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 148
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 149 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
PE + +++ SDV+S+G+ L E++S E SN D
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 246
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 272
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + +L L C + RP QI L+ +
Sbjct: 273 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 272
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + +L L C + RP QI L+ +
Sbjct: 273 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 131
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 132 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
PE + +++ SDV+S+G+ L E++S E SN D
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 237 NNFSEINIIGEGSFGLAYK------GLLQDGSLVVIKRHL-QTQIQNFLHEVKHIARV-H 288
N+ ++IGEG+FG K GL D ++ +K + + ++F E++ + ++ H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPI-----------GKLTMRQR 337
H +++ L+G CE L +Y P+GN+ + L S L L+ +Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK--LVTGSHHAGS 395
L A A+G+++L H + N+L+ ENY AK++D+GL + V G
Sbjct: 142 LHFAADVARGMDYLSQ--KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 199
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
V LN S Y+ SDV+S+GV L E++S
Sbjct: 200 LP-VRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 233
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 26/271 (9%)
Query: 245 IGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQN----FLHEVKHIARVHHRHLVKLVGFC 299
IG G+FG + G L+ D +LV +K +T + FL E + + + H ++V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLF 359
+ ++ + + G+ L +EG +L ++ L + AA G+E+L S
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEG---ARLRVKTLLQMVGDAAAGMEYLESKC--CI 235
Query: 360 HMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---FLDPELNLSKNYSAG 416
H N L+ E K+SD+G+ + +A S + PE YS+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 417 SDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAATEM 476
SDV+SFG+ L E S + N SN Q + + G + E A +
Sbjct: 296 SDVWSFGILLWETFSLGASPYPNLSNQ------QTREFVEKGGRL--PCPELCPDAVFRL 347
Query: 477 MELALQCVDVS-SRRPSMRQIAGELEGIQER 506
ME QC +RPS I EL+ I++R
Sbjct: 348 ME---QCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 102
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 158
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 159 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 270
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + +L L C + RP QI L+ +
Sbjct: 271 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 237 NNFSEINIIGEGSFGLAYK------GLLQDGSLVVIKRHL-QTQIQNFLHEVKHIARV-H 288
N+ ++IGEG+FG K GL D ++ +K + + ++F E++ + ++ H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPI-----------GKLTMRQR 337
H +++ L+G CE L +Y P+GN+ + L S L L+ +Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK--LVTGSHHAGS 395
L A A+G+++L H N+L+ ENY AK++D+GL + V G
Sbjct: 145 LHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 202
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
V LN S Y+ SDV+S+GV L E++S
Sbjct: 203 LP-VRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 236
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 272
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + +L L C + RP QI L+ +
Sbjct: 273 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 272
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + +L L C + RP QI L+ +
Sbjct: 273 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 272
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + +L L C + RP QI L+ +
Sbjct: 273 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 272
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + +L L C + RP QI L+ +
Sbjct: 273 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 237 NNFSEINIIGEGSFGLAYK------GLLQDGSLVVIKRHL-QTQIQNFLHEVKHIARV-H 288
N+ ++IGEG+FG K GL D ++ +K + + ++F E++ + ++ H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPI-----------GKLTMRQR 337
H +++ L+G CE L +Y P+GN+ + L S L L+ +Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK--LVTGSHHAGS 395
L A A+G+++L H N+L+ ENY AK++D+GL + V G
Sbjct: 135 LHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 192
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
V LN S Y+ SDV+S+GV L E++S
Sbjct: 193 LP-VRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 30/278 (10%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ +Y+ NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKT 464
PE + +++ SDV+S+G+ L E++S E SN D V ++ D G +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPP 272
Query: 465 LGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELE 501
+ + +L L C + RP QI L+
Sbjct: 273 M-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + + V +K + +Q FL E + + H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ G++ + L EG GK+ + + + + A+G+ ++ H
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIER--KNYIHRD 135
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGSDVY 420
R +NVL+ E+ K++D+GL +++ + + A + PE ++ SDV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
SFG+ L E+++ + +N+D
Sbjct: 196 SFGILLYEIVTYGKIPYPGRTNAD 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 235 ATNNFSEINIIGEGSFGLAYKG-LLQDGSLVVIKR----------HLQTQIQNFLHEVKH 283
A N IG+G FGL +KG L++D S+V IK + + Q F EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 284 IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
++ ++H ++VKL G ++ ++ +++P G++ + L D + +R L IALG
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVL---LEEN--YTAKVSDYGLLKLVTGSHHAGSTSA 398
+E++ + PP+ H R+ N+ L+EN AKV+D+GL + H
Sbjct: 135 ----IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLG 188
Query: 399 VDCFLDPEL--NLSKNYSAGSDVYSFGVFLLELISG 432
++ PE ++Y+ +D YSF + L +++G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 245 IGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQN----FLHEVKHIARVHHRHLVKLVGFC 299
IG G+FG + G L+ D +LV +K +T + FL E + + + H ++V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLF 359
+ ++ + + G+ L +EG +L ++ L + AA G+E+L S
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEG---ARLRVKTLLQMVGDAAAGMEYLESKC--CI 235
Query: 360 HMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---FLDPELNLSKNYSAG 416
H N L+ E K+SD+G+ + A S + PE YS+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 417 SDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAATEM 476
SDV+SFG+ L E S + N SN Q + + G + E A +
Sbjct: 296 SDVWSFGILLWETFSLGASPYPNLSNQ------QTREFVEKGGRL--PCPELCPDAVFRL 347
Query: 477 MELALQCVDVS-SRRPSMRQIAGELEGIQER 506
ME QC +RPS I EL+ I++R
Sbjct: 348 ME---QCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++I +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 86 PIYIVI-EYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE- 84
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 85
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 140
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + + A + PE ++ SDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 201 SFGILLTEIVT----HGR 214
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 75
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H +
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRN 130
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + + A + PE ++ SDV+
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 191 SFGILLTEIVT----HGR 204
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 89
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 144
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + + A + PE ++ SDV+
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 205 SFGILLTEIVT----HGR 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 84
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + + A + PE ++ SDV+
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 200 SFGILLTEIVT----HGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 77
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 132
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 193 SFGILLTELTT 203
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + + A + PE ++ SDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 195 SFGILLTEIVT----HGR 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 75
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 130
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 191 SFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 73
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 128
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 189 SFGILLTELTT 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 333
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERMN--YVHRD 388
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 449 SFGILLTELTT 459
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++I +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 86 PIYIVI-EYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + A + PE L ++ SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 34/289 (11%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVK 282
N+K+L +L+ IG+G FG G + + V Q FL E
Sbjct: 4 NMKELKLLQ------------TIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEAS 51
Query: 283 HIARVHHRHLVKLVG-FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ ++ H +LV+L+G EE ++ +Y+ G++ ++L +G + L +
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFS 108
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
L + +E+L H NVL+ E+ AKVSD+GL K + + G
Sbjct: 109 LDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-- 164
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLILQVKRSCDLGKY 460
+ PE K +S SDV+SFG+ L E+ S GR + R ++++ +V++ +
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEKGYKM--- 218
Query: 461 VDKTLGEQTVGAATEMMELALQCVDV-SSRRPSMRQIAGELEGIQEREI 508
+ G + E+ C + ++ RPS Q+ +LE I+ E+
Sbjct: 219 ------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 261
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 18/220 (8%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ + + NG++ + L + + T+ Q + + G A G+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGM 131
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 132 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
PE + +++ SDV+S+G+ L E++S E SN D
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 235 ATNNFSEINIIGEGSFGLAYKG-LLQDGSLVVIKR----------HLQTQIQNFLHEVKH 283
A N IG+G FGL +KG L++D S+V IK + + Q F EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 284 IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
++ ++H ++VKL G ++ ++ +++P G++ + L D + +R L IALG
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVL---LEEN--YTAKVSDYGLLKLVTGSHHAGSTSA 398
+E++ + PP+ H R+ N+ L+EN AKV+D+G + H
Sbjct: 135 ----IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLG 188
Query: 399 VDCFLDPEL--NLSKNYSAGSDVYSFGVFLLELISG 432
++ PE ++Y+ +D YSF + L +++G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 34/289 (11%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVK 282
N+K+L +L+ IG+G FG G + + V Q FL E
Sbjct: 19 NMKELKLLQ------------TIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEAS 66
Query: 283 HIARVHHRHLVKLVG-FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ ++ H +LV+L+G EE ++ +Y+ G++ ++L +G + L +
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFS 123
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
L + +E+L H NVL+ E+ AKVSD+GL K + + G
Sbjct: 124 LDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-- 179
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLILQVKRSCDLGKY 460
+ PE K +S SDV+SFG+ L E+ S GR + R ++++ +V++ +
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEKGYKM--- 233
Query: 461 VDKTLGEQTVGAATEMMELALQCVDV-SSRRPSMRQIAGELEGIQEREI 508
+ G + E+ C + ++ RPS Q+ +LE I+ E+
Sbjct: 234 ------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 276
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 74
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 129
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + + A + PE ++ SDV+
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 190 SFGILLTEIVT----HGR 203
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 85
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 140
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 201 SFGILLTEIVT----HGR 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 244 IIGEGSFGLAYKGLLQ----DGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG G L+ V IK + + Q ++FL E + + H ++V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G +++ +++ NG + L +G + T+ Q + + G A G+ +L +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDG----QFTVIQLVGMLRGIAAGMRYLADM- 164
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNLSK 411
H N+L+ N KVSD+GL +++ A T+ + PE +
Sbjct: 165 -GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVG 471
+++ SDV+S+G+ + E++S E + SN Q++I ++ L +D G
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVIKAIEEGYRLPAPMDCPAG----- 276
Query: 472 AATEMMELALQCVDVS-SRRPSMRQIAGELE 501
+ +L L C + RP QI G L+
Sbjct: 277 ----LHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+ + +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 76 PIXI-VTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 129
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + A + PE L ++ SDV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 190 SFGILLTELTT 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 87
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 142
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 203 SFGILLTEIVT----HGR 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 244 IIGEGSFGLAYKGLLQ----DGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG +G L+ S V IK + + Q + FL E + + H ++++L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G + +++ +++ NG + + L L G+ T+ Q + + G A G+ +L +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYLAEM- 137
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV-TGSHHAGSTSAVDC-----FLDPELNL 409
H N+L+ N KVSD+GL + + S TS++ + PE
Sbjct: 138 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 410 SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+ +++ SD +S+G+ + E++S E + SN D
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 231
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 250
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 305
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 366 SFGILLTELTT 376
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 88
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 143
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 204 SFGILLTEIVT----HGR 217
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 244 IIGEGSFGLAYKGLLQDGS----LVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG G L+ V IK + Q ++FL E + + H +++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G + ++I +Y+ NG++ L ++ G+ T+ Q + + G G+++L +
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKND----GRFTVIQLVGMLRGIGSGMKYLSDM- 150
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNLSK 411
H N+L+ N KVSD+G+ +++ A T+ + PE +
Sbjct: 151 -SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+++ SDV+S+G+ + E++S E + SN D
Sbjct: 210 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 242
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVK 282
N+K+L +L+ IG+G FG G + + V Q FL E
Sbjct: 191 NMKELKLLQ------------TIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEAS 238
Query: 283 HIARVHHRHLVKLVG-FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ ++ H +LV+L+G EE ++ +Y+ G++ ++L +G + L +
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFS 295
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
L + +E+L H NVL+ E+ AKVSD+GL K + + G
Sbjct: 296 LDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-- 351
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGR 438
+ PE K +S SDV+SFG+ L E+ S GR + R
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 235 ATNNFSEINIIGEGSFGLAYKG-LLQDGSLVVIKR----------HLQTQIQNFLHEVKH 283
A N IG+G FGL +KG L++D S+V IK + + Q F EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 284 IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
++ ++H ++VKL G ++ ++ +++P G++ + L D + +R L IALG
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVL---LEEN--YTAKVSDYGLLKLVTGSHHAGSTSA 398
+E++ + PP+ H R+ N+ L+EN AKV+D+ L + H
Sbjct: 135 ----IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLG 188
Query: 399 VDCFLDPEL--NLSKNYSAGSDVYSFGVFLLELISG 432
++ PE ++Y+ +D YSF + L +++G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 250
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 305
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 366 SFGILLTELTT 376
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 195 SFGILLTEIVT----HGR 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 244 IIGEGSFGLAYKGLLQ----DGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG +G L+ S V IK + + Q + FL E + + H ++++L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G + +++ +++ NG + + L L G+ T+ Q + + G A G+ +L +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYLAEM- 135
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV-TGSHHAGSTSAVDC-----FLDPELNL 409
H N+L+ N KVSD+GL + + S TS++ + PE
Sbjct: 136 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 410 SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+ +++ SD +S+G+ + E++S E + SN D
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 244 IIGEGSFGLAYKGLLQDGS----LVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG G L+ V IK + Q ++FL E + + H +++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G + ++I +Y+ NG++ L ++ G+ T+ Q + + G G+++L +
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKND----GRFTVIQLVGMLRGIGSGMKYLSDM- 135
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNLSK 411
H N+L+ N KVSD+G+ +++ A T+ + PE +
Sbjct: 136 -SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+++ SDV+S+G+ + E++S E + SN D
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 227
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 195 SFGILLTEIVT----HGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 81
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 136
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 197 SFGILLTEIVT----HGR 210
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 243 NIIGEGSFGLAYKGLLQDGS----LVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVK 294
+IG G FG G L+ V IK + Q ++FL E + + H +++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
L G + ++I +Y+ NG++ L ++ G+ T+ Q + + G G+++L +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKND----GRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNLS 410
H N+L+ N KVSD+G+ +++ A T+ + PE
Sbjct: 130 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 411 KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+ +++ SDV+S+G+ + E++S E + SN D
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 221
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 80
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 135
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 196 SFGILLTEIVT----HGR 209
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 18/220 (8%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ + + NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
PE + +++ SDV+S+G+ L E++S E SN D
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 18/220 (8%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVH 288
N S ++G G FG G L+ S V IK + + Q ++FL E + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H ++++L G ++ +++ + + NG++ + L + + T+ Q + + G A G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGM 160
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++L + H N+L+ N KVSD+GL +++ A T+ +
Sbjct: 161 KYLSDM--GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
PE + +++ SDV+S+G+ L E++S E SN D
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 244 IIGEGSFGLAYKGLLQDGSL----VVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG G L+ V IK + + Q ++FL E + + H +++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G ++ +++ +Y+ NG++ L ++ G+ T+ Q + + G + G+++L +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKND----GQFTVIQLVGMLRGISAGMKYLSDM- 143
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLDPELNLSK 411
H N+L+ N KVSD+GL +++ A T+ + PE +
Sbjct: 144 -GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+++ SDV+S+G+ + E++S E +N D
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD 235
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 24/269 (8%)
Query: 245 IGEGSFGLAYKGLLQ---DGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G FG+ G + D ++ +IK ++ F E + + ++ H LVK G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+ ++ +YI NG + N+L S G L Q L + +G+ L S H
Sbjct: 75 EYPIYIVTEYISNGCLLNYL-RSHG---KGLEPSQLLEMCYDVCEGMAFLES--HQFIHR 128
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS--TSAVDCFLDPELNLSKNYSAGSDV 419
N L++ + KVSD+G+ + V + S T + PE+ YS+ SDV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 420 YSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAATEMMEL 479
++FG+ + E+ S + ++NS+ ++L+V + L + L T+ ++
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSE--VVLKVSQGHRLYR---PHLASDTI------YQI 237
Query: 480 ALQCV-DVSSRRPSMRQIAGELEGIQERE 507
C ++ +RP+ +Q+ +E ++E++
Sbjct: 238 MYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 250
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 305
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 366 SFGILLTELTT 376
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 10/194 (5%)
Query: 242 INIIGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFC 299
I +G G FG + G + V IK + ++FL E + + ++ H LV+L
Sbjct: 14 IKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLF 359
E ++ +Y+ G++ + L D EG L + + +A A G+ ++ +
Sbjct: 74 SE-EPIYIVTEYMNKGSLLDFLKDGEG---RALKLPNLVDMAAQVAAGMAYIERM--NYI 127
Query: 360 HMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGS 417
H R++N+L+ K++D+GL +L+ + A + PE L ++ S
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 418 DVYSFGVFLLELIS 431
DV+SFG+ L EL++
Sbjct: 188 DVWSFGILLTELVT 201
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G + + L G L + Q + +A A G+ ++ + H
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 242 INIIGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFC 299
+ +G G FG + G + + V +K + +Q FL E + + H LV+L
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLF 359
+ +I +++ G++ + L EG GK+ + + + + A+G+ ++
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIER--KNYI 131
Query: 360 HMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV--DCFLDPELNLSKNYSAGS 417
H R +NVL+ E+ K++D+GL +++ + + A + PE ++ S
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 418 DVYSFGVFLLELISGREAHGRNHSNSD 444
+V+SFG+ L E+++ + +N+D
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNAD 218
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 81
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + ++ A G+ ++ + H
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVERM--NYVHRD 136
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 197 SFGILLTELTT 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 32/251 (12%)
Query: 245 IGEGSFGLAYKG------LLQDGSLVVIKRHLQTQI---QNFLHEVKHIARVHHRHLVKL 295
+GEG+FG + +D LV +K + ++F E + + + H H+VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDS--------EGLP---IGKLTMRQRLSIALGA 344
G C + +++++Y+ +G++ L +G P G+L + Q L IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDC 401
A G+ +L S H T N L+ N K+ D+G+ + V + + G T
Sbjct: 143 ASGMVYLAS--QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD------QNLILQVKRSC 455
++ PE + + ++ SDV+SFGV L E+ + + SN++ Q +L+ R C
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVC 260
Query: 456 DLGKYVDKTLG 466
Y D LG
Sbjct: 261 PKEVY-DVMLG 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G + + L G L + Q + +A A G+ ++ + H
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG+ G + V IK + + F+ E K + + H LV+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG + N+L + + +Q L + + +E+L S H
Sbjct: 92 RPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES--KQFLHRD 145
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
N L+ + KVSD+GL + V + S + + PE+ + +S+ SD++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
+FGV + E+ S + +NS+
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG+ G + V IK + + F+ E K + + H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG + N+L + + +Q L + + +E+L S H
Sbjct: 77 RPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES--KQFLHRD 130
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPELNLSKNYSAGSDV 419
N L+ + KVSD+GL + V + GS V + PE+ + +S+ SD+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-WSPPEVLMYSKFSSKSDI 189
Query: 420 YSFGVFLLELISGREAHGRNHSNSD 444
++FGV + E+ S + +NS+
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 251
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 306
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 367 SFGILLTELTT 377
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 245 IGEGSFGLAYKGLLQ---DGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G FG+ G + D ++ +IK ++ F+ E K + + H LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +Y+ NG + N+L + + +Q L + + +E+L S H
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES--KQFLHR 124
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ + KVSD+GL + V + GS V + PE+ + +S+ SD
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSKFSSKSD 183
Query: 419 VYSFGVFLLELISGREAHGRNHSNSD 444
+++FGV + E+ S + +NS+
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 245 IGEGSFGLAYKGLLQ---DGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G FG+ G + D ++ +IK ++ F+ E K + + H LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +Y+ NG + N+L + + +Q L + + +E+L S H
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES--KQFLHR 128
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVDCFLDPELNLSKNYSAGSD 418
N L+ + KVSD+GL + V + GS V + PE+ + +S+ SD
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSKFSSKSD 187
Query: 419 VYSFGVFLLELISGREAHGRNHSNSD 444
+++FGV + E+ S + +NS+
Sbjct: 188 IWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 245 IGEGSFGLAYKGLLQ---DGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G FG+ G + D ++ +IK ++ F+ E K + + H LV+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +Y+ NG + N+L + + +Q L + + +E+L S H
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES--KQFLHR 135
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDV 419
N L+ + KVSD+GL + V + S + + PE+ + +S+ SD+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 420 YSFGVFLLELISGREAHGRNHSNSD 444
++FGV + E+ S + +NS+
Sbjct: 196 WAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 81
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + ++ A G+ ++ + H
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVERM--NYVHRD 136
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ EN KV+D+GL +L+ + A + PE L ++ SDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 197 SFGILLTELTT 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 245 IGEGSFGLAYKGLLQ---DGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+G G FG+ G + D ++ +IK ++ F+ E K + + H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 302 NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHM 361
+I +Y+ NG + N+L + + +Q L + + +E+L S H
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES--KQFLHR 129
Query: 362 HFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDV 419
N L+ + KVSD+GL + V + S + + PE+ + +S+ SD+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 420 YSFGVFLLELISGREAHGRNHSNSD 444
++FGV + E+ S + +NS+
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + +T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 10/204 (4%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG+ G + V IK + + F+ E K + + H LV+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG + N+L + + +Q L + + +E+L S H
Sbjct: 92 RPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES--KQFLHRD 145
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
N L+ + KVSD+GL + V S + + PE+ + +S+ SD++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 421 SFGVFLLELISGREAHGRNHSNSD 444
+FGV + E+ S + +NS+
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQN--------FLHEVKHIARV 287
++ ++G G+FG YKG+ + DG V I ++ +N L E +A V
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
++ +L+G C + Q L+ +P G + +H+ ++ G+L + L+ + AKG
Sbjct: 77 GSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENR----GRLGSQDLLNWCMQIAKG 131
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT---GSHHAGSTSAVDCFLD 404
+ +L + L H NVL++ K++D+GL +L+ +HA ++
Sbjct: 132 MSYLEDV--RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + ++ SDV+S+GV + EL++
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVK 282
N+K+L +L+ IG+G FG G + + V Q FL E
Sbjct: 10 NMKELKLLQ------------TIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEAS 57
Query: 283 HIARVHHRHLVKLVG-FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ ++ H +LV+L+G EE ++ +Y+ G++ ++L +G + L +
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFS 114
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
L + +E+L H NVL+ E+ AKVSD+GL K + + G
Sbjct: 115 LDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-- 170
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLILQVKRSCDLGKY 460
+ PE +S SDV+SFG+ L E+ S GR + R ++++ +V++ +
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEKGYKM--- 224
Query: 461 VDKTLGEQTVGAATEMMELALQCVDV-SSRRPSMRQIAGELEGIQEREI 508
+ G + E+ C + ++ RPS Q+ +LE I+ E+
Sbjct: 225 ------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 267
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG FG K ++ V +K + + + + E++ + + H++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 209 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG FG K ++ V +K + + + + E++ + + H++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 150 TYQLARGMEYLAS--QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG FG K ++ V +K + + + + E++ + + H++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 155 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 244 IIGEGSFGLAYKGLLQDGS----LVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG G L+ V IK + + Q ++FL E + + H +++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G ++ ++I +++ NG++ + L ++ G+ T+ Q + + G A G+++L +
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLADM- 154
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV-TGSHHAGSTSAVDC-----FLDPELNL 409
H N+L+ N KVSD+GL + + + TSA+ + PE
Sbjct: 155 -NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 410 SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQT 469
+ +++ SDV+S+G+ + E++S E + +N Q++I +++ L +D
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN--QDVINAIEQDYRLPPPMD------- 264
Query: 470 VGAATEMMELALQCVDVS-SRRPSMRQIAGELE 501
+ + +L L C + RP QI L+
Sbjct: 265 --CPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 233 KHATNNFSEINIIGEGSFGLAYK----GLLQDGSLVVI-----KRHLQTQIQ-NFLHEVK 282
++ NN + IGEG+FG ++ GLL ++ K +Q +F E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 283 HIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHL--------------------- 321
+A + ++VKL+G C L+++Y+ G++ L
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 322 YDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDY 381
S G P L+ ++L IA A G+ +L H T N L+ EN K++D+
Sbjct: 163 VSSPGPP--PLSCAEQLCIARQVAAGMAYLSER--KFVHRDLATRNCLVGENMVVKIADF 218
Query: 382 GLLKLVTGS--HHAGSTSAVDC-FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
GL + + + + A A+ ++ PE Y+ SDV+++GV L E+ S
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG FG K ++ V +K + + + + E++ + + H++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 152 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G+G FG + G + V IK + + FL E + + ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 84
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
++ +Y+ G++ + L G L + Q + +A A G+ ++ + H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 139
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
+N+L+ EN KV+D+GL +L+ + + A + PE L ++ SDV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 421 SFGVFLLELIS 431
SFG+ L EL +
Sbjct: 200 SFGILLTELTT 210
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGS----LVVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG G L+ V IK + + Q ++FL E + + H +++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G ++ ++I +++ NG++ + L ++ G+ T+ Q + + G A G+++L +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLADM- 128
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV-TGSHHAGSTSAVDC-----FLDPELNL 409
H N+L+ N KVSD+GL + + + TSA+ + PE
Sbjct: 129 -NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 410 SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSD 444
+ +++ SDV+S+G+ + E++S E + +N D
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 9/211 (4%)
Query: 233 KHATNNFSEINIIGEGSFGLAYKGLLQD-GSLVVIKR-HLQTQIQNFLHEVKHIARVHHR 290
K F + +GEGS+G YK + ++ G +V IK+ +++ +Q + E+ + +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSP 84
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEH 350
H+VK G +N ++ +Y G+V + + L LT + +I KGLE+
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEY 140
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLL-KLVTGSHHAGSTSAVDCFLDPELNL 409
LH + H + N+LL AK++D+G+ +L ++ PE+
Sbjct: 141 LHFMRK--IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 410 SKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
Y+ +D++S G+ +E+ G+ + H
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPYADIH 229
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I IG GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTIGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G++ +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ KV+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L YD +P ++T + +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN +++D+GL + + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I IG GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTIGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G++ +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ KV+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G G + G + V +K Q + FL E + ++ H+ LV+L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +Y+ NG++ + L G+ KLT+ + L +A A+G+ + H
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + + K++D+GL +L+ + A + PE ++ SDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 421 SFGVFLLELISGREAHGR 438
SFG+ L E+++ HGR
Sbjct: 195 SFGILLTEIVT----HGR 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I IG GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTIGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ KV+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I Y GN++ +L YD +P ++T + +S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 245 IGEGSFGLAY--------KGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG K ++ V +K + + + + E++ + + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I Y GN++ +L YD +P ++T + +S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A+G+E+L S H NVL+ EN K++D+GL + + + T+
Sbjct: 163 TYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV + E+ +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 50/294 (17%)
Query: 245 IGEGSFGLAYKGLL-----QDGSLVVIKRHLQ-----TQIQNFLHEVKHIARVHHRHLVK 294
+GEG FG K + G V + L+ +++++ L E + +V+H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG-------------------KLTMR 335
L G C ++ LLI +Y G+++ L +S + G LTM
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHA 393
+S A ++G+++L + L H N+L+ E K+SD+GL + V S+
Sbjct: 151 DLISFAWQISQGMQYLAEM--KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 394 GSTSAVDC-FLDPELNLSKNYSAGSDVYSFGVFLLELIS--GREAHGRNHSNSDQNLILQ 450
S + ++ E Y+ SDV+SFGV L E+++ G G +
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-----------IP 257
Query: 451 VKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+R +L K + E+ + EM L LQC +RP I+ +LE +
Sbjct: 258 PERLFNLLKTGHRM--ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 33 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 149 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 260
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 261 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 311
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 24 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 140 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 251
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 252 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 302
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 26 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 142 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 253
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 254 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 304
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 18 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T G + +
Sbjct: 134 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 245
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K ++EL C + + RPS +I ++ E RE+ +SE
Sbjct: 246 K-----PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 296
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 20 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 136 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 247
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 248 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 298
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 27 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 143 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 200
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 254
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 255 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 305
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 26 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 142 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 253
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 254 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 304
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 62/300 (20%)
Query: 245 IGEGSFGLAYKGLL-----QDGSLVVIKRHLQ-----TQIQNFLHEVKHIARVHHRHLVK 294
+GEG FG K + G V + L+ +++++ L E + +V+H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG-------------------KLTMR 335
L G C ++ LLI +Y G+++ L +S + G LTM
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+S A ++G+++L + L H N+L+ E K+SD+GL + V
Sbjct: 151 DLISFAWQISQGMQYLAEM--KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 396 TS---------AVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS--GREAHGRNHSNSD 444
S A++ D Y+ SDV+SFGV L E+++ G G
Sbjct: 209 RSQGRIPVKWMAIESLFD------HIYTTQSDVWSFGVLLWEIVTLGGNPYPG------- 255
Query: 445 QNLILQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ +R +L K + E+ + EM L LQC +RP I+ +LE +
Sbjct: 256 ----IPPERLFNLLKTGHRM--ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 55 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 171 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 228
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 282
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 283 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 333
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 27 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T G + +
Sbjct: 143 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 254
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 255 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 305
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 62/300 (20%)
Query: 245 IGEGSFGLAYKGLL-----QDGSLVVIKRHLQ-----TQIQNFLHEVKHIARVHHRHLVK 294
+GEG FG K + G V + L+ +++++ L E + +V+H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG-------------------KLTMR 335
L G C ++ LLI +Y G+++ L +S + G LTM
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+S A ++G+++L + L H N+L+ E K+SD+GL + V
Sbjct: 151 DLISFAWQISQGMQYLAEM--SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 396 TS---------AVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS--GREAHGRNHSNSD 444
S A++ D Y+ SDV+SFGV L E+++ G G
Sbjct: 209 RSQGRIPVKWMAIESLFD------HIYTTQSDVWSFGVLLWEIVTLGGNPYPG------- 255
Query: 445 QNLILQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ +R +L K + E+ + EM L LQC +RP I+ +LE +
Sbjct: 256 ----IPPERLFNLLKTGHRM--ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 20 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY----DSEGLPI-GKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + E P+ ++ + + +A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N + E++T K+ D+G+ + + T + G + +
Sbjct: 136 DGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 247
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K ++EL C + + RPS +I ++ E RE+ +SE
Sbjct: 248 K-----PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 298
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 42 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+ +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHAR 145
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G +
Sbjct: 146 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWTLCG 201
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQ------IQNFLHEVKHIARVHH 289
+ F + ++G G FG + ++ G L K+ + + Q + E K +A+VH
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
R +V L E L+ + G+++ H+Y+ + G R A GLE
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLE 303
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHHAGSTSAVDCFLDPELN 408
HLH + + + NVLL+++ ++SD GL ++L G + F+ PEL
Sbjct: 304 HLHQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 409 LSKNYSAGSDVYSFGVFLLELISGR---EAHGRNHSNSD 444
L + Y D ++ GV L E+I+ R A G N +
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 274 IQNFLHEVKHIARVHHRHLVKLVGFCEEN--HQQLLIYDYIPNGNVQNHLYDSEGLPIGK 331
I + E++ + ++H ++VK G C E+ + LI +++P+G+++ +L ++ K
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN----K 122
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
+ ++Q+L A+ KG+++L S H NVL+E + K+ D+GL K +
Sbjct: 123 INLKQQLKYAVQICKGMDYLGSR--QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
Query: 392 HAGST----SAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + + PE + + SDV+SFGV L EL++
Sbjct: 181 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 27 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 75
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+ +
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHAR 130
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G +
Sbjct: 131 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWTLCG 186
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 14/217 (6%)
Query: 239 FSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQ------IQNFLHEVKHIARVHHRH 291
F + ++G G FG + ++ G L K+ + + Q + E K +A+VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+V L E L+ + G+++ H+Y+ + G R A GLEHL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHL 305
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLS 410
H + + + NVLL+++ ++SD GL ++L G + F+ PEL L
Sbjct: 306 HQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 411 KNYSAGSDVYSFGVFLLELISGR---EAHGRNHSNSD 444
+ Y D ++ GV L E+I+ R A G N +
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 150
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNL 409
H N +L+E +T KV+D+GL K H+ ++ E
Sbjct: 151 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ ++ SDV+SFGV L EL++
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT 231
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 14/217 (6%)
Query: 239 FSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQ------IQNFLHEVKHIARVHHRH 291
F + ++G G FG + ++ G L K+ + + Q + E K +A+VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+V L E L+ + G+++ H+Y+ + G R A GLEHL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHL 305
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLS 410
H + + + NVLL+++ ++SD GL ++L G + F+ PEL L
Sbjct: 306 HQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 411 KNYSAGSDVYSFGVFLLELISGR---EAHGRNHSNSD 444
+ Y D ++ GV L E+I+ R A G N +
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 14/217 (6%)
Query: 239 FSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQ------IQNFLHEVKHIARVHHRH 291
F + ++G G FG + ++ G L K+ + + Q + E K +A+VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+V L E L+ + G+++ H+Y+ + G R A GLEHL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHL 305
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLS 410
H + + + NVLL+++ ++SD GL ++L G + F+ PEL L
Sbjct: 306 HQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 411 KNYSAGSDVYSFGVFLLELISGR---EAHGRNHSNSD 444
+ Y D ++ GV L E+I+ R A G N +
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 274 IQNFLHEVKHIARVHHRHLVKLVGFCEEN--HQQLLIYDYIPNGNVQNHLYDSEGLPIGK 331
I + E++ + ++H ++VK G C E+ + LI +++P+G+++ +L ++ K
Sbjct: 55 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN----K 110
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
+ ++Q+L A+ KG+++L S H NVL+E + K+ D+GL K +
Sbjct: 111 INLKQQLKYAVQICKGMDYLGSR--QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168
Query: 392 HAGST----SAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + + PE + + SDV+SFGV L EL++
Sbjct: 169 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 33 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYD-----SEGLPIGKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + + ++ + + +A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 149 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 260
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 261 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 311
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 239 FSEINIIGEGSFG---LAYKGLLQDGS-----LVVIKRHLQTQIQN-FLHEVKHIARVHH 289
+I +GEG FG L DG+ + +K Q+++ + E++ + ++H
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 70
Query: 290 RHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
H+VK G CE+ ++ L+ +Y+P G+++++L P + + Q L A +G
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEG 124
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH-----AGSTSAVDCF 402
+ +LH+ H NVLL+ + K+ D+GL K V H S V +
Sbjct: 125 MAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
L K Y A SDV+SFGV L EL++ +++ H+ + +
Sbjct: 183 APECLKECKFYYA-SDVWSFGVTLYELLTYCDSNQSPHTK--------------FTELIG 227
Query: 463 KTLGEQTVGAATEMME 478
T G+ TV TE++E
Sbjct: 228 HTQGQMTVLRLTELLE 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 143
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 144 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 203 TQK-FTTKSDVWSFGVLLWELMT 224
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 42 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+ +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHAR 145
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 146 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 201
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 239 FSEINIIGEGSFG---LAYKGLLQDGS-----LVVIKRHLQTQIQN-FLHEVKHIARVHH 289
+I +GEG FG L DG+ + +K Q+++ + E++ + ++H
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 69
Query: 290 RHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
H+VK G CE+ ++ L+ +Y+P G+++++L P + + Q L A +G
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEG 123
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH-----AGSTSAVDCF 402
+ +LH+ H NVLL+ + K+ D+GL K V H S V +
Sbjct: 124 MAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
L K Y A SDV+SFGV L EL++ +++ H+ + +
Sbjct: 182 APECLKECKFYYA-SDVWSFGVTLYELLTYCDSNQSPHTK--------------FTELIG 226
Query: 463 KTLGEQTVGAATEMME 478
T G+ TV TE++E
Sbjct: 227 HTQGQMTVLRLTELLE 242
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 26 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 139
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H + N ++ ++T K+ D+G+ + + T + G +
Sbjct: 140 IADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 251
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P+MR E+ + + + LH F E
Sbjct: 252 LDQP--DNCPERVTDLMRMCWQF------NPNMRPTFLEIVNLLKDD---LHPSFPE 297
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 25 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 138
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H + N ++ ++T K+ D+G+ + + T + G +
Sbjct: 139 IADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 250
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P+MR E+ + + + LH F E
Sbjct: 251 LDQP--DNCPERVTDLMRMCWQF------NPNMRPTFLEIVNLLKDD---LHPSFPE 296
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 151
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 211 TQK-FTTKSDVWSFGVLLWELMT 232
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 43/296 (14%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G+ + V+K +T++ FL+E + +
Sbjct: 23 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYD-----SEGLPIGKLTMRQRLSIALGAA 345
H+V+L+G + L+I + + G+++++L + + ++ + + +A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC-F 402
G+ +L++ H N ++ E++T K+ D+G+ + + T + G + +
Sbjct: 139 DGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+ PE ++ SDV+SFGV L E+ + E + SN QV R G +D
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVMEGGLLD 250
Query: 463 KTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGIQE---REIGRLHSE 514
K + EL C + + RPS +I ++ E RE+ +SE
Sbjct: 251 K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 301
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHK----DNIGSQYLLNWCVQIAKG 130
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 131 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 169
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 170 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 229 TQK-FTTKSDVWSFGVLLWELMT 250
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 25 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 138
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H N ++ ++T K+ D+G+ + + T + G +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 250
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P MR E+ + + + LH F E
Sbjct: 251 LDQP--DNCPERVTDLMRMCWQF------NPKMRPTFLEIVNLLKDD---LHPSFPE 296
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 237 NNFSEINIIGEGSFG-------------LAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH 283
+ F I +G GSFG A K +L +V +K QI++ L+E +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLK-----QIEHTLNEKRI 94
Query: 284 IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
+ V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQ 149
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
E+LHSL L + + N+L+++ +V+D+G K V G +L
Sbjct: 150 IVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 237 NNFSEINIIGEGSFG-------------LAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH 283
+ F I +G GSFG A K +L +V +K QI++ L+E +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLK-----QIEHTLNEKRI 94
Query: 284 IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
+ V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQ 149
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
E+LHSL L + + N+L+++ +V+D+G K V G +L
Sbjct: 150 IVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 97
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQIV 152
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 153 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 208
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 148
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 149 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 208 TQK-FTTKSDVWSFGVLLWELMT 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 170
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 171 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 230 TQK-FTTKSDVWSFGVLLWELMT 251
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 237 NNFSEINIIGEGSFG-------------LAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH 283
+ F I +G GSFG A K +L +V +K QI++ L+E +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLK-----QIEHTLNEKRI 94
Query: 284 IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
+ V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQ 149
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
E+LHSL L + + N+L+++ +V+D+G K V G +L
Sbjct: 150 IVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 117
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQIV 172
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 173 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 228
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 97
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQIV 152
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 153 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 208
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 149
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 150 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 209 TQK-FTTKSDVWSFGVLLWELMT 230
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 97
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQIV 152
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 153 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 208
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHK----DNIGSQYLLNWCVQIAKG 129
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 130 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 89
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+P G + +HL IG+ + A
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFSEPHARFYAAQIV 144
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 145 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 200
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 133
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 134 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 129
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 130 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 146
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 147 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 206 TQK-FTTKSDVWSFGVLLWELMT 227
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 130
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 131 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 131
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 132 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 129
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 130 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 132
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 133 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 151
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 211 TQK-FTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG+++L S
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLAS- 150
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH------AGSTSAVDCFLDPELN 408
H N +L+E +T KV+D+GL + + + G+ V L
Sbjct: 151 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 409 LSKNYSAGSDVYSFGVFLLELIS 431
K ++ SDV+SFGV L EL++
Sbjct: 210 TQK-FTTKSDVWSFGVLLWELMT 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ KV+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 26/238 (10%)
Query: 213 PGAVSPIDTQNLKQLTILELKHATNNFSEI-----NIIGEGSFGLAYKGLLQDGSLVVIK 267
PG V ID L + ++H S + +IG G FG Y G L D I
Sbjct: 2 PGTVH-IDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIH 60
Query: 268 RHLQT--------QIQNFLHEVKHIARVHHRHLVKLVGFCEENH-QQLLIYDYIPNGNVQ 318
+++ ++ FL E + H +++ L+G C + L++ Y+ +G+++
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 319 NHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKV 378
N + + P T++ + L AKG++ L S H N +L+E +T KV
Sbjct: 121 NFIRNETHNP----TVKDLIGFGLQVAKGMKFLAS--KKFVHRDLAARNCMLDEKFTVKV 174
Query: 379 SDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+D+GL K H+ ++ E ++ ++ SDV+SFGV L EL++
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 42 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+P G + +HL IG+
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHAR 145
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 146 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 201
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T +I++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ KV+D+GL K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIK------RHLQTQIQN--FLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I R + N L E +A V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 163
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 164 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 139
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 140 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 198 LESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 132
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 133 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 25 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 138
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H N ++ ++T K+ D+G+ + + T + G +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 250
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P MR E+ + + + LH F E
Sbjct: 251 LDQP--DNCPERVTDLMRMCWQF------NPKMRPTFLEIVNLLKDD---LHPSFPE 296
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 131
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 132 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG++ L S
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLAS- 210
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNL 409
H N +L+E +T KV+D+GL K H+ ++ E
Sbjct: 211 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ ++ SDV+SFGV L EL++
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMT 291
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 129
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 130 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 136
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 137 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 132
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 133 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 132
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 133 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 141 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 233 KHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH-------IA 285
K++ +F + +G GSFG + + + L+ +I L +V+H ++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGKLTMRQRLSIALG 343
V H ++++ G ++ Q +I DYI G + + L S+ P + K A
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-------YAAE 114
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
LE+LHS + + + N+LL++N K++D+G K V + ++
Sbjct: 115 VCLALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYX--LCGTPDYI 170
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ +K Y+ D +SFG+ + E+++G
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 145 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 202
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 203 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 135
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 136 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 194 LESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 97
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y P G + +HL IG+ + A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHARFYAAQIV 152
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+++++ KV+D+G K V G +L P
Sbjct: 153 LTFEYLHSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAP 208
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 131/297 (44%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 25 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 138
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H N ++ ++T K+ D+G+ + + T G +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 250
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P MR E+ + + + LH F E
Sbjct: 251 LDQP--DNCPERVTDLMRMCWQF------NPKMRPTFLEIVNLLKDD---LHPSFPE 296
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 25 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 138
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H N ++ ++T K+ D+G+ + + T G +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 250
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P+MR E+ + + + LH F E
Sbjct: 251 LDQP--DNCPERVTDLMRMCWQF------NPNMRPTFLEIVNLLKDD---LHPSFPE 296
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 123
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 124 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 24 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 137
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H N ++ ++T K+ D+G+ + + T + G +
Sbjct: 138 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 249
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P MR E+ + + + LH F E
Sbjct: 250 LDQP--DNCPERVTDLMRMCWQF------NPKMRPTFLEIVNLLKDD---LHPSFPE 295
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 154
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 155 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 213 LESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 89
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+P G + +HL IG+ A
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR-----IGRFXEPHARFYAAQIV 144
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 145 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 200
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 148 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 206 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 156 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y P G + +HL IG+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFXEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ KV+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG++ L S
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLAS- 152
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNL 409
H N +L+E +T KV+D+GL K H+ ++ E
Sbjct: 153 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ ++ SDV+SFGV L EL++
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG++ L S
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLAS- 152
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNL 409
H N +L+E +T KV+D+GL K H+ ++ E
Sbjct: 153 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ ++ SDV+SFGV L EL++
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT 233
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 149 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 207 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG++ L S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLAS- 151
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNL 409
H N +L+E +T KV+D+GL K H+ ++ E
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ ++ SDV+SFGV L EL++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG++ L S
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLAS- 149
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNL 409
H N +L+E +T KV+D+GL K H+ ++ E
Sbjct: 150 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ ++ SDV+SFGV L EL++
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 156 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 131/297 (44%), Gaps = 49/297 (16%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ--------------NFLHEVKHIARVHHR 290
+G+GSFG+ Y+G +D +IK +T++ FL+E +
Sbjct: 22 LGQGSFGMVYEGNARD----IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQRLSIALG 343
H+V+L+G + L++ + + +G+++++L ++ G P T+++ + +A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP--PPTLQEMIQMAAE 135
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGSTSAVDC 401
A G+ +L++ H N ++ ++T K+ D+G+ + + T G +
Sbjct: 136 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
++ PE ++ SD++SFGV L E+ S E + SN QV + G Y
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGY 247
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQEREIGRLHSEFGE 517
+D+ + T++M + Q P MR E+ + + + LH F E
Sbjct: 248 LDQP--DNCPERVTDLMRMCWQF------NPKMRPTFLEIVNLLKDD---LHPSFPE 293
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 213 PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ 271
P +P N QL IL+ + ++G G+FG YKG+ + +G V I ++
Sbjct: 22 PSGTAP----NQAQLRILK----ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK 73
Query: 272 TQIQN--------FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYD 323
+ F+ E +A + H HLV+L+G C QL + +P+G + ++++
Sbjct: 74 ILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHE 132
Query: 324 SEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL 383
+ + + L+ + AKG+ +L L H NVL++ K++D+GL
Sbjct: 133 HKD----NIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGL 186
Query: 384 LKLVTGS---HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+L+ G ++A ++ E + ++ SDV+S+GV + EL++
Sbjct: 187 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 156 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 21/228 (9%)
Query: 234 HATNNFSEINIIGEGSFGLAYKGLL----QDGSLVVIK-----RHLQTQIQNFLHEVKHI 284
+ + + IGEGSFG K +L +DG VIK R + + EV +
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
A + H ++V+ EEN ++ DY G++ + +G+ + Q L +
Sbjct: 78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE---DQILDWFVQI 134
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFL 403
L+H+H + H ++ N+ L ++ T ++ D+G+ +++ + A + +L
Sbjct: 135 CLALKHVHDR--KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYL 192
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
PE+ +K Y+ SD+++ G L EL + + A + S +NL+L++
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHAF---EAGSMKNLVLKI 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
+IG G FG Y G L D I +++ ++ FL E + H +++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 296 VGFCEENH-QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+G C + L++ Y+ +G+++N + + P T++ + L AKG++ L S
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLAS- 156
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLL-----KLVTGSHHAGSTSAVDCFLDPELNL 409
H N +L+E +T KV+D+GL K H+ ++ E
Sbjct: 157 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ ++ SDV+SFGV L EL++
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMT 237
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 239 FSEINIIGEGSFG---LAYKGLLQDGS--LVVIKRHLQTQI-----QNFLHEVKHIARVH 288
+I +GEG FG L DG+ +V +K L+ + E+ + ++
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA-LKADCGPQHRSGWKQEIDILRTLY 74
Query: 289 HRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAK 346
H H++K G CE+ ++ L+ +Y+P G+++++L P + + Q L A +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICE 128
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA------GSTSAVD 400
G+ +LHS H + NVLL+ + K+ D+GL K V H G +
Sbjct: 129 GMAYLHS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF- 185
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
+ PE + SDV+SFGV L EL++ H +S Q+ + + +
Sbjct: 186 -WYAPECLKEYKFYYASDVWSFGVTLYELLT--------HCDSSQSPPTKFLELIGIAQ- 235
Query: 461 VDKTLGEQTVGAATEMME 478
G+ TV TE++E
Sbjct: 236 -----GQMTVLRLTELLE 248
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 117
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 172
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G+ + +L P
Sbjct: 173 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA--TWTLCGTPEYLAP 228
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ +V+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L Y+ P +L+ + +S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + + T+
Sbjct: 197 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 254
Query: 401 C---FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 255 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T +I++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y P G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ +V+D+GL K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 42 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ L KL ++N ++ +Y P G + +HL IG+ +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHAR 145
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ KV+D+G K V G
Sbjct: 146 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCG 201
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 245 IGEGSFG---LAYK-GLLQDGSLVVIKRHL--------QTQIQNFLHEVKHIARV-HHRH 291
+GEG+FG LA GL +D V K + + + + + E++ + + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTMRQRLSI 340
++ L+G C ++ +I +Y GN++ +L ++ P +L+ + +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
A A+G+E+L S H NVL+ E+ K++D+GL + + HH
Sbjct: 156 AYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDXXKKTT 210
Query: 401 C------FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + Y+ SDV+SFGV L E+ +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 42 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ L KL ++N ++ +Y P G + +HL IG+ +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFSEPHAR 145
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ KV+D+G K V G
Sbjct: 146 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCG 201
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 83
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L++E +V+D+G K V G +L P
Sbjct: 139 LTFEYLHSL--DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 194
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G + +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQN----- 276
N QL IL+ + ++G G+FG YKG+ + +G V I ++ +
Sbjct: 5 NQAQLRILK----ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 60
Query: 277 ---FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT 333
F+ E +A + H HLV+L+G C QL + +P+G + ++++ + IG
Sbjct: 61 NVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKD-NIGSQL 118
Query: 334 MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--- 390
+ L+ + AKG+ +L L H NVL++ K++D+GL +L+ G
Sbjct: 119 L---LNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 173
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++A ++ E + ++ SDV+S+GV + EL++
Sbjct: 174 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK----QIEHTLNEKRIQQ 97
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y P G + +HL IG+ + A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR-----IGRFSEPHARFYAAQIV 152
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ KV+D+G K V G +L P
Sbjct: 153 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAP 208
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 131
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+G KL+ +HA ++
Sbjct: 132 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 239 FSEINIIGEGSFG---LAYKGLLQDGS--LVVIKRHLQTQI-----QNFLHEVKHIARVH 288
+I +GEG FG L DG+ +V +K L+ + E+ + ++
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA-LKADCGPQHRSGWKQEIDILRTLY 74
Query: 289 HRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAK 346
H H++K G CE+ ++ L+ +Y+P G+++++L P + + Q L A +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICE 128
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA------GSTSAVD 400
G+ +LH+ H + NVLL+ + K+ D+GL K V H G +
Sbjct: 129 GMAYLHA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF- 185
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
+ PE + SDV+SFGV L EL++ H +S Q+ + + +
Sbjct: 186 -WYAPECLKEYKFYYASDVWSFGVTLYELLT--------HCDSSQSPPTKFLELIGIAQ- 235
Query: 461 VDKTLGEQTVGAATEMME 478
G+ TV TE++E
Sbjct: 236 -----GQMTVLRLTELLE 248
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + A+G
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAEG 126
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 127 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 185 LESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++ G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 136
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 137 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 131
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+G KL+ +HA ++
Sbjct: 132 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 42 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 90
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ L KL ++N ++ +Y P G + +HL IG+
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR-----IGRFXEPHAR 145
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+++++ KV+D+G K V G
Sbjct: 146 FYAAQIVLTFEYLHSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCG 201
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 133
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+G KL+ +HA ++
Sbjct: 134 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 131
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+G KL+ +HA ++
Sbjct: 132 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 129
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+G KL+ +HA ++
Sbjct: 130 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++G G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 136
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+G KL+ +HA ++
Sbjct: 137 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++ G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 136
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 137 MNYLEDR--RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ--------TQIQNFLHEVKHIARV 287
F +I ++ G+FG YKGL + +G V I ++ + L E +A V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ H+ +L+G C + Q LI +P G + +++ + + + + L+ + AKG
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKG 129
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG---SHHAGSTSAVDCFLD 404
+ +L L H NVL++ K++D+GL KL+ +HA ++
Sbjct: 130 MNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELIS 431
E L + Y+ SDV+S+GV + EL++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------------------QIQNFL 278
+ F I +G GSFG V++ +H++T QI++ L
Sbjct: 41 DQFERIKTLGTGSFGR-----------VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL 89
Query: 279 HEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL 338
+E + + V+ LVKL ++N ++ +Y+ G + +HL IG+ +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHAR 144
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
A E+LHSL L + + N+L+++ +V+D+G K V G
Sbjct: 145 FYAAQIVLTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCG 200
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+L PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 97
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 152
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 153 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 208
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFAEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + I + + Q S KG+E+L +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTS---QICKGMEYLGT- 135
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 136 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 34/307 (11%)
Query: 219 IDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQT------ 272
+D+ L ++ + + H +IG+G FG+ Y G D + I+ +++
Sbjct: 3 LDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE 62
Query: 273 --QIQNFLHEVKHIARVHHRHLVKLVGFC--EENHQQLLIYDYIPNGNVQNHLYDSEGLP 328
Q++ FL E + ++H +++ L+G E +L+ Y+ +G++ + + P
Sbjct: 63 MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNP 121
Query: 329 IGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT 388
T++ +S L A+G+E+L H N +L+E++T KV+D+GL + +
Sbjct: 122 ----TVKDLISFGLQVARGMEYLAE--QKFVHRDLAARNCMLDESFTVKVADFGLARDIL 175
Query: 389 GSHHAGSTSAVDCFLDPELNL-----SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNS 443
+ L + + ++ SDV+SFGV L EL++ R+
Sbjct: 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF 235
Query: 444 DQNLILQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEG 502
D L R +Y +L ++ QC + + RP+ R + GE+E
Sbjct: 236 DLTHFLAQGRRLPQPEYCPDSL-----------YQVMQQCWEADPAVRPTFRVLVGEVEQ 284
Query: 503 IQEREIG 509
I +G
Sbjct: 285 IVSALLG 291
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA--GSTSAVDCFL 403
E+LHSL L + + N+L+++ +V+D+G K V G G+ A L
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA----L 205
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ LSK Y+ D ++ GV + E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 117
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ A
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFYAAQIV 172
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 173 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 228
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 91
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ A
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFYAAQIV 146
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 147 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 202
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 29/268 (10%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFL-----HEVKHIARVHHRHLV 293
F+++ IG+GSFG +KG+ VV + + + E+ +++ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
K G ++ + +I +Y+ G+ + L G L Q +I KGL++LHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS 122
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCF-LDPELNLSKN 412
H + +NVLL E+ K++D+G+ +T + +T F + PE+
Sbjct: 123 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 413 YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGA 472
Y + +D++S G+ +EL G H H LI + G Y
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------ 228
Query: 473 ATEMMELALQCVDVSSRRPSMRQIAGEL 500
+ + E C++ + PS R A EL
Sbjct: 229 SKPLKEFVEACLN---KEPSFRPTAKEL 253
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFXEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 136
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 137 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 131
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 132 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 163
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 164 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 132
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 138
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 139 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 135
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 136 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 139
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 140 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 132
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 137
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 138 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 130
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 131 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ LSK Y+ D ++ GV + ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 29/268 (10%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFL-----HEVKHIARVHHRHLV 293
F+++ IG+GSFG +KG+ VV + + + E+ +++ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
K G ++ + +I +Y+ G+ + L G L Q +I KGL++LHS
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS 142
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCF-LDPELNLSKN 412
H + +NVLL E+ K++D+G+ +T + +T F + PE+
Sbjct: 143 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 200
Query: 413 YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGA 472
Y + +D++S G+ +EL G H H LI + G Y
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------ 248
Query: 473 ATEMMELALQCVDVSSRRPSMRQIAGEL 500
+ + E C++ + PS R A EL
Sbjct: 249 SKPLKEFVEACLN---KEPSFRPTAKEL 273
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+F EI +IG G FG +K + DG VI+R ++ + EVK +A++ H ++V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRR-VKYNNEKAEREVKALAKLDHVNIVHYN 71
Query: 297 GFC--------EENHQQLLIYDYIPNGNVQNHLYDSEGLPI-----GKLTMRQRLSIALG 343
G C E + L DY P + + ++ L I K T+ Q + G
Sbjct: 72 G-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 344 A--------------AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG 389
KG++++HS L H + SN+ L + K+ D+GL+ +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 390 SHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELI 430
+ ++ PE S++Y D+Y+ G+ L EL+
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 150
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 151 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 133
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H + T N+L+E K+ D+GL K++ + + PE
Sbjct: 134 -KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 150
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 151 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+++++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
E+ +SK Y+ D ++ GV + E+ +G
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 139 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 139 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++++ IGEG++G+ AY + + + V IK+ QT Q L E++ + R H +
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + + YI ++ LY KL Q+LS
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLY--------KLLKSQQLSNDHICYFLYQIL 154
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+L+ K+ D+GL ++ H H G + A
Sbjct: 155 RGLKYIHS--ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 32/227 (14%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIAR 286
L +L + + IG+G +G + G + G V +K T+ ++ E +
Sbjct: 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQT 85
Query: 287 VHHRHLVKLVGFCEEN-------HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
V RH ++GF + Q LI DY NG++ ++L + L + L
Sbjct: 86 VLMRH-ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLK 138
Query: 340 IALGAAKGLEHLHSLV------PPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHH 392
+A + GL HLH+ + P + H ++ N+L+++N T ++D GL +K ++ ++
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE 198
Query: 393 A----GSTSAVDCFLDPEL---NLSKNYSAG---SDVYSFGVFLLEL 429
+ ++ PE+ +L++N+ +D+YSFG+ L E+
Sbjct: 199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 136/302 (45%), Gaps = 38/302 (12%)
Query: 215 AVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ-- 271
++ P+D K +L ++ ++G G FG +KG+ + +G + I ++
Sbjct: 10 SIEPLDPSE-KANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI 68
Query: 272 ---TQIQNFLHEVKH---IARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSE 325
+ Q+F H I + H H+V+L+G C + Q L+ Y+P G++ +H+
Sbjct: 69 EDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHR 127
Query: 326 GLPIGKLTMRQRLSIALGAAKGLEHL--HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL 383
G L + L+ + AKG+ +L H +V H + NVLL+ +V+D+G+
Sbjct: 128 ----GALGPQLLLNWGVQIAKGMYYLEEHGMV----HRNLAARNVLLKSPSQVQVADFGV 179
Query: 384 LKLVTGSH----HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGR 438
L+ ++ + + + ++ K Y+ SDV+S+GV + EL++ G E +
Sbjct: 180 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGK-YTHQSDVWSYGVTVWELMTFGAEPYAG 238
Query: 439 NHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAG 498
L++ DL + ++ Q M+ + +D + RP+ +++A
Sbjct: 239 ----------LRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMID-ENIRPTFKELAN 287
Query: 499 EL 500
E
Sbjct: 288 EF 289
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 132
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 133 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 237 NNFSEINIIGEGSFGLA-----------YKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIA 285
+ F I +G GSFG Y + D VV + QI++ L+E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK----QIEHTLNEKRILQ 96
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
V+ LVKL ++N ++ +Y+ G + +HL IG+ + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIV 151
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
E+LHSL L + + N+L+++ +V+D+G K V G +L P
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAP 207
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
+ LSK Y+ D ++ GV + E+ +G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 129/286 (45%), Gaps = 29/286 (10%)
Query: 233 KHATNNFSEINII---GEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIA 285
KH+ +F ++N + E G +KG Q +VV ++ + ++F E +
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLR 62
Query: 286 RVHHRHLVKLVGFCEE--NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
H +++ ++G C+ LI ++P G++ N L++ + + Q + AL
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ---SQAVKFALD 119
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
A+G+ LH+L P + + +V+++E+ TA++S + V S + ++
Sbjct: 120 MARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS----MADVKFSFQSPGRMYAPAWV 175
Query: 404 DPELNLSKNYSA---GSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
PE K +D++SF V L EL++ RE + SN + + + ++
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGMKVALEG------- 227
Query: 461 VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGELEGIQER 506
+ T+ +++M++ + + ++RP I LE +Q++
Sbjct: 228 LRPTIPPGISPHVSKLMKICMN--EDPAKRPKFDMIVPILEKMQDK 271
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 132
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 133 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 241
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +Y+P G+++++L + ++ + L KG+E+L +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 132
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 29/268 (10%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFL-----HEVKHIARVHHRHLV 293
F+++ IG+GSFG +KG+ VV + + + E+ +++ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
K G ++ + +I +Y+ G+ + L G L Q +I KGL++LHS
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS 137
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTSAVDCFLDPELNLSKN 412
H + +NVLL E+ K++D+G+ +T + ++ PE+
Sbjct: 138 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 413 YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGA 472
Y + +D++S G+ +EL G H H LI + G Y
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------ 243
Query: 473 ATEMMELALQCVDVSSRRPSMRQIAGEL 500
+ + E C++ + PS R A EL
Sbjct: 244 SKPLKEFVEACLN---KEPSFRPTAKEL 268
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 28/231 (12%)
Query: 225 KQLTILELKHATNNFSEINIIGEGSFGLAYKGLL---------QDGSLVVIKRHLQTQI- 274
KQ + E+ + F E +GE FG YKG L Q ++ +K + +
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 275 QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-----------D 323
+ F HE AR+ H ++V L+G ++ +I+ Y +G++ L D
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 324 SEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL 383
+ L + + A G+E+L S + H T NVL+ + K+SD GL
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSS--HHVVHKDLATRNVLVYDKLNVKISDLGL 191
Query: 384 LKLVTGSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ V + + G++ ++ PE + +S SD++S+GV L E+ S
Sbjct: 192 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ----IQNF-LHEVKHIARVHHRH 291
+ +I IGEGS+G+ +K +D G +V IK+ L+++ I+ L E++ + ++ H +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
LV L+ + L+++Y + + G+P + + ++ A H
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVP---EHLVKSITWQTLQAVNFCHK 120
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDCFLDPELNL- 409
H+ + H + N+L+ ++ K+ D+G +L+TG S + A + PEL +
Sbjct: 121 HNCI----HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 410 SKNYSAGSDVYSFGVFLLELISG 432
Y DV++ G EL+SG
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 66 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 316 NVQNHL---------YDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTS 366
N+ +L Y E L LT+ + + AKG+E L S H
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR--KXIHRDLAAR 177
Query: 367 NVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFG 423
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 424 VFLLELIS 431
V L E+ S
Sbjct: 238 VLLWEIFS 245
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 239 FSEINIIGEGSFG---LAYKGLLQDGS--LVVIKRHLQTQI-----QNFLHEVKHIARVH 288
+I +GEG FG L DG+ +V +K L+ + E+ + ++
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA-LKADAGPQHRSGWKQEIDILRTLY 91
Query: 289 HRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAK 346
H H++K G CE+ L+ +Y+P G+++++L P + + Q L A +
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICE 145
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA------GSTSAVD 400
G+ +LH+ H NVLL+ + K+ D+GL K V H G +
Sbjct: 146 GMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF- 202
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY 460
+ PE + SDV+SFGV L EL++ H +S Q+ + + +
Sbjct: 203 -WYAPECLKEYKFYYASDVWSFGVTLYELLT--------HCDSSQSPPTKFLELIGIAQ- 252
Query: 461 VDKTLGEQTVGAATEMME 478
G+ TV TE++E
Sbjct: 253 -----GQMTVLRLTELLE 265
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 29/268 (10%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFL-----HEVKHIARVHHRHLV 293
F+++ IG+GSFG +KG+ VV + + + E+ +++ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
K G ++ + +I +Y+ G+ + L G L Q +I KGL++LHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS 122
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTSAVDCFLDPELNLSKN 412
H + +NVLL E+ K++D+G+ +T + ++ PE+
Sbjct: 123 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 413 YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGA 472
Y + +D++S G+ +EL G H H LI + G Y
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------ 228
Query: 473 ATEMMELALQCVDVSSRRPSMRQIAGEL 500
+ + E C++ + PS R A EL
Sbjct: 229 SKPLKEFVEACLN---KEPSFRPTAKEL 253
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 139
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 140 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 248
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 140
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 141 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 249
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 131
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 132 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 240
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 139 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAG---STSAVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G A
Sbjct: 139 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 139
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAG---STSAVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G A
Sbjct: 140 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 248
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 234 HATNNFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQIQNF-----LHEVKHIARV 287
+ + + ++GEGS+G+ K +D G +V IK+ L++ + E+K + ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG-KLTMRQRLSIALGAAK 346
H +LV L+ C++ + L+++++ + L D E P G + Q+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGI 137
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA-GSTSAVDCFLDP 405
G H H+++ H + N+L+ ++ K+ D+G + + A + P
Sbjct: 138 GFCHSHNII----HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 406 ELNLSK-NYSAGSDVYSFGVFLLELISG 432
EL + Y DV++ G + E+ G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 245 IGEGSFG---LAYKGLLQD--GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+G+G+FG + LQD G +V +K+ + +++F E++ + + H ++VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 297 GFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
G C ++ LI +++P G+++ +L + ++ + L KG+E+L +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT- 135
Query: 355 VPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS----AVDCFLDPELNLS 410
H T N+L+E K+ D+GL K++ + + PE
Sbjct: 136 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 411 KNYSAGSDVYSFGVFLLELIS 431
+S SDV+SFGV L EL +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLV 296
+F EI +IG G FG +K + DG VIKR ++ + EVK +A++ H ++V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR-VKYNNEKAEREVKALAKLDHVNIVHYN 70
Query: 297 GFCEENHQQLLIYDYIP-----------------------NGNVQNHLYDSEGLPIGKLT 333
G C + +DY P G ++ + G + K+
Sbjct: 71 G-CWDG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 334 MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA 393
L + KG++++HS L + + SN+ L + K+ D+GL+ +
Sbjct: 124 A---LELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELI 430
+ ++ PE S++Y D+Y+ G+ L EL+
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 134
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 135 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V IK+ QT Q L E+K + R H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKCQHLSNDHICYFLYQIL 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 139 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 134
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 135 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY L + V I++ QT Q L E+K + R H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 138
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 139 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 134
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 135 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 245 IGEGSFGLAYKGLL---------QDGSLVVIKRHLQTQI-QNFLHEVKHIARVHHRHLVK 294
+GE FG YKG L Q ++ +K + + + F HE AR+ H ++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLY-----------DSEGLPIGKLTMRQRLSIALG 343
L+G ++ +I+ Y +G++ L D + L + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTSAVD 400
A G+E+L S + H T NVL+ + K+SD GL + V + + G++
Sbjct: 137 IAAGMEYLSS--HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE + +S SD++S+GV L E+ S
Sbjct: 195 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 136
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 137 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 134
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 135 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 154
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 155 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 25/210 (11%)
Query: 237 NNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ-----TQIQNFLHEVKH---IARV 287
++ ++G G FG +KG+ + +G + I ++ + Q+F H I +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
H H+V+L+G C + Q L+ Y+P G++ +H+ G L + L+ + AKG
Sbjct: 73 DHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKG 127
Query: 348 LEHL--HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH----HAGSTSAVDC 401
+ +L H +V H + NVLL+ +V+D+G+ L+ ++ + + +
Sbjct: 128 MYYLEEHGMV----HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ K Y+ SDV+S+GV + EL++
Sbjct: 184 MALESIHFGK-YTHQSDVWSYGVTVWELMT 212
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 142
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 143 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 251
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 134
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 135 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 41/291 (14%)
Query: 237 NNFSEINIIGEGSFGLAYKGLL--QDGSLVVIKRHL-------QTQIQNFLHEVKHIARV 287
F+ ++G+G FG + L +DGS V + + + I+ FL E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 288 HHRHLVKLVGFCEENHQQ------LLIYDYIPNGNVQNHLYDSEGLPIGK----LTMRQR 337
H H+ KLVG + + ++I ++ +G++ L S IG+ L ++
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR---IGENPFNLPLQTL 139
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHH-AGS 395
+ + A G+E+L S H N +L E+ T V+D+GL K+ +G ++ G
Sbjct: 140 VRFMVDIACGMEYLSS--RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 396 TSAVDCFLDPELNLSKN-YSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLILQVKR 453
S + +L+ N Y+ SDV++FGV + E+++ G+ + + N ++ R
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR 257
Query: 454 SCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSSR-RPSMRQIAGELEGI 503
+Q E+ +L QC + RPS + ELE I
Sbjct: 258 L------------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 112
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 166
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 167 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 223
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 243 NIIGEGSFGLAYKGLL--QDG-SLVVIKRHL------QTQIQNFLHEVKHIARVHHRHLV 293
I+GEG FG +G L +DG SL V + + Q +I+ FL E + H +++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 294 KLVGFCEENHQQ-----LLIYDYIPNGNVQNHLYDSEGLPIGK--LTMRQRLSIALGAAK 346
+L+G C E Q ++I ++ G++ +L S L G + ++ L + A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR-LETGPKHIPLQTLLKFMVDIAL 158
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHH-AGSTSAVDC-FL 403
G+E+L + H N +L ++ T V+D+GL K+ +G ++ G + + ++
Sbjct: 159 GMEYLSN--RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELIS 431
E + Y++ SDV++FGV + E+ +
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 94
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLV- 387
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 155 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 212
Query: 388 -TGSHHAGSTSAVDC-FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G + G + + ++ PE + +++ +D +SFGV L E+ S
Sbjct: 213 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLV- 387
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 178 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235
Query: 388 -TGSHHAGSTSAVDC-FLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G + G + + ++ PE + +++ +D +SFGV L E+ S
Sbjct: 236 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 114
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 168
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 169 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 225
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 90
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 144
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 145 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 112
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 166
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 167 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 223
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 86
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 140
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 141 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 197
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 106
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 160
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 161 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 217
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 116
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 170
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 171 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 227
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 97
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 151
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 152 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 208
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + + V +K + ++ FL E + + H LVKL +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 81
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +++ G++ + L EG K + + + + A+G+ + H
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQR--NYIHRD 136
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + K++D+GL +++ + + A + PE +++ SDV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 421 SFGVFLLELIS 431
SFG+ L+E+++
Sbjct: 197 SFGILLMEIVT 207
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 323 DSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYG 382
DS+G +TM +S + A+G+E L S H N+LL EN K+ D+G
Sbjct: 187 DSDGFYKEPITMEDLISYSFQVARGMEFLSSR--KCIHRDLAARNILLSENNVVKICDFG 244
Query: 383 LLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
L + + + G T ++ PE K YS SDV+S+GV L E+ S
Sbjct: 245 LARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ + L T+++ + HI HH ++V L+G C + L+ I +Y G
Sbjct: 64 MLKEGATASEYKALMTELKI----LTHIG--HHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 316 NVQNHL 321
N+ N+L
Sbjct: 118 NLSNYL 123
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 157
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 211
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 212 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 268
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 90
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 144
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 145 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQ------TQIQNFLHEVKHIARVHHRHLVKLVGF 298
IG GSF YKGL + ++ V LQ ++ Q F E + + + H ++V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 299 CEENHQQ----LLIYDYIPNGNVQNHL--YDSEGLPIGKLTMRQRLSIALGAAKGLEHLH 352
E + +L+ + +G ++ +L + + + + RQ L KGL+ LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL-------KGLQFLH 146
Query: 353 SLVPPLFHMHFRTSNVLLE-ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
+ PP+ H + N+ + + K+ D GL L S A + F PE +
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFXAPE-XYEE 204
Query: 412 NYSAGSDVYSFGVFLLE 428
Y DVY+FG LE
Sbjct: 205 KYDESVDVYAFGXCXLE 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 132
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 133 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 132
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 133 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 132
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 133 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 82
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 136
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 137 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 193
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 83
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 137
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 138 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 194
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 228 TILELKHATNNFSEINIIGEGSFG---LAYKGLLQD--GSLVVIKRHLQT---QIQNFLH 279
TI E +H I+ +G+G+FG L L D G+LV +K+ + Q ++F
Sbjct: 2 TIFEERH----LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 57
Query: 280 EVKHIARVHHRHLVKL--VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQR 337
E++ + +H +VK V + + L+ +Y+P+G +++ L +L +
Sbjct: 58 EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA----RLDASRL 113
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS------H 391
L + KG+E+L S H N+L+E K++D+GL KL+
Sbjct: 114 LLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR 171
Query: 392 HAGSTSAVDCFLDPELNLSKN-YSAGSDVYSFGVFLLELIS 431
G + + PE +LS N +S SDV+SFGV L EL +
Sbjct: 172 EPGQSPIF--WYAPE-SLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARV---HHRHLV 293
+N + +IG G +G YKG L D V +K QNF++E K+I RV H ++
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINE-KNIYRVPLMEHDNIA 70
Query: 294 KLVGFCEE-----NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
+ + E + LL+ +Y PNG++ +L L RL A +GL
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRL--AHSVTRGL 124
Query: 349 EHLHSLVP-------PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS---------HH 392
+LH+ +P + H + NVL++ + T +SD+GL +TG+ +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 393 AGSTSAVDCFLDPE-----LNLSKNYSA--GSDVYSFGVFLLELI 430
A S ++ PE +NL SA D+Y+ G+ E+
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 91
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 145
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 146 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 202
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 79
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 133
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 134 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFG---LAYKGLLQD--GSLVVIKRHLQT---QIQNFLH 279
TI E +H I+ +G+G+FG L L D G+LV +K+ + Q ++F
Sbjct: 6 TIFEERH----LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 61
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQR 337
E++ + +H +VK G +Q L+ +Y+P+G +++ L +L +
Sbjct: 62 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRL 117
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV---TGSHHAG 394
L + KG+E+L S H N+L+E K++D+GL KL+ +
Sbjct: 118 LLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 175
Query: 395 STSAVDCFLDPELNLSKN-YSAGSDVYSFGVFLLELIS 431
F +LS N +S SDV+SFGV L EL +
Sbjct: 176 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 21/228 (9%)
Query: 221 TQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQT--QIQNF 277
++L ++ + L+ F + ++G G++G YKG ++ G L IK T + +
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI 67
Query: 278 LHEVKHIARV-HHRHLVKLVG-FCEEN-----HQQLLIYDYIPNGNVQNHLYDSEGLPIG 330
E+ + + HHR++ G F ++N Q L+ ++ G+V + + +++G
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---N 124
Query: 331 KLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTG 389
L I +GL HLH + H + NVLL EN K+ D+G+ +L
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 390 SHHAGSTSAVDCFLDPEL-----NLSKNYSAGSDVYSFGVFLLELISG 432
+ ++ PE+ N Y SD++S G+ +E+ G
Sbjct: 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGLL-----QDGSLVVIKRHLQT-----QIQNFLHEVKHIAR 286
NN +G G+FG + +D L V + L++ + + + E+K ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGK-----LTMRQRLSI 340
+ H ++V L+G C L+I +Y G++ N L + K L +R L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTS 397
+ A+G+ L S H NVLL + AK+ D+GL + + + G+
Sbjct: 166 SSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 398 AVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE Y+ SDV+S+G+ L E+ S
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 132
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 133 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFG---LAYKGLLQD--GSLVVIKRHLQT---QIQNFLH 279
TI E +H I+ +G+G+FG L L D G+LV +K+ + Q ++F
Sbjct: 18 TIFEERH----LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 73
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQR 337
E++ + +H +VK G +Q L+ +Y+P+G +++ L +L +
Sbjct: 74 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRL 129
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV---TGSHHAG 394
L + KG+E+L S H N+L+E K++D+GL KL+ +
Sbjct: 130 LLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 395 STSAVDCFLDPELNLSKN-YSAGSDVYSFGVFLLELIS 431
F +LS N +S SDV+SFGV L EL +
Sbjct: 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 237 NNFSEINIIGEGSFGLAYKGLL-----QDGSLVVIKRHLQT-----QIQNFLHEVKHIAR 286
NN +G G+FG + +D L V + L++ + + + E+K ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHL-----------YDSEGLPIGKLTM 334
+ H ++V L+G C L+I +Y G++ N L Y+ P +L+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH-- 392
R L + A+G+ L S H NVLL + AK+ D+GL + + +
Sbjct: 166 RDLLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 393 -AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G+ ++ PE Y+ SDV+S+G+ L E+ S
Sbjct: 224 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFG---LAYKGLLQD--GSLVVIKRHLQT---QIQNFLH 279
TI E +H I+ +G+G+FG L L D G+LV +K+ + Q ++F
Sbjct: 5 TIFEERH----LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQR 337
E++ + +H +VK G +Q L+ +Y+P+G +++ L +L +
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRL 116
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV---TGSHHAG 394
L + KG+E+L S H N+L+E K++D+GL KL+ +
Sbjct: 117 LLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 174
Query: 395 STSAVDCFLDPELNLSKN-YSAGSDVYSFGVFLLELIS 431
F +LS N +S SDV+SFGV L EL +
Sbjct: 175 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + + V +K + ++ FL E + + H LVKL +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 254
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +++ G++ + L EG K + + + + A+G+ + H
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQR--NYIHRD 309
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--FLDPELNLSKNYSAGSDVY 420
R +N+L+ + K++D+GL +++ + + A + PE +++ SDV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 421 SFGVFLLELIS 431
SFG+ L+E+++
Sbjct: 370 SFGILLMEIVT 380
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFL-----HEVKHIARVHHRHLV 293
F+++ IG+GSFG +KG+ VV + + + E+ +++ ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
K G + + +I +Y+ G+ + L P + + L L KGL++LHS
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLKEIL---KGLDYLHS 138
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCF-LDPELNLSKN 412
H + +NVLL E K++D+G+ +T + +T F + PE+
Sbjct: 139 --EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 413 YSAGSDVYSFGVFLLELISGREAHGRNH 440
Y + +D++S G+ +EL G + H
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMH 224
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 237 NNFSEINIIGEGSFGLAYKGLL-----QDGSLVVIKRHLQT-----QIQNFLHEVKHIAR 286
NN +G G+FG + +D L V + L++ + + + E+K ++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGK-----LTMRQRLSI 340
+ H ++V L+G C L+I +Y G++ N L + K L +R L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---AGSTS 397
+ A+G+ L S H NVLL + AK+ D+GL + + + G+
Sbjct: 158 SSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 398 AVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
++ PE Y+ SDV+S+G+ L E+ S
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
I+GEG FG Y+G+ + I ++T + F+ E + + H H+VKL
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
+G EE +++ Y P G + ++L ++ L + + +L K + +L S+
Sbjct: 91 IGIIEEEPTWIIMELY-PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI- 144
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--HHAGSTSAVDCFLDPELNLSKNY 413
H N+L+ K+ D+GL + + + A T ++ PE + +
Sbjct: 145 -NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 414 SAGSDVYSFGVFLLELIS 431
+ SDV+ F V + E++S
Sbjct: 204 TTASDVWMFAVCMWEILS 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 132
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 133 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 243 NIIGEGSFGLAYKGLLQDGSLVVIKR-HLQTQIQNFLHEVKHIARV-HHRHLVKLVGFCE 300
+I +FG+ + ++ ++K ++ + + E+K + + HH ++V L+G C
Sbjct: 43 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 102
Query: 301 ENHQQLL-IYDYIPNGNVQNHLYDS----------EGLPIGKLTMRQRLSIALGAAKGLE 349
+ L+ I ++ GN+ +L E L LT+ + + AKG+E
Sbjct: 103 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPE 406
L S H N+LL E K+ D+GL + + G ++ PE
Sbjct: 163 FLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 220
Query: 407 LNLSKNYSAGSDVYSFGVFLLELIS 431
+ Y+ SDV+SFGV L E+ S
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 132
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 133 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++++H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 195
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
I+GEG FG Y+G+ + I ++T + F+ E + + H H+VKL
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
+G EE +++ Y P G + ++L ++ L + + +L K + +L S+
Sbjct: 75 IGIIEEEPTWIIMELY-PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI- 128
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--HHAGSTSAVDCFLDPELNLSKNY 413
H N+L+ K+ D+GL + + + A T ++ PE + +
Sbjct: 129 -NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 414 SAGSDVYSFGVFLLELIS 431
+ SDV+ F V + E++S
Sbjct: 188 TTASDVWMFAVCMWEILS 205
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 64 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 175
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 236 FGVLLWEIFS 245
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQ-IQNFLHEVKHIARVHHRHLVKL 295
++++ +IG GSFG+ Y+ L D G LV IK+ LQ + +N E++ + ++ H ++V+L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 296 VGFCEENHQQL------LIYDYIPNG--NVQNHLYDS-EGLPI--GKLTMRQRLSIALGA 344
F + ++ L+ DY+P V H + + LP+ KL M Q
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF------ 132
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA-KVSDYGLLKLVTGSHHAGSTSAVDCFL 403
+ L ++HS + H + N+LL+ + K+ D+G K + S +
Sbjct: 133 -RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 404 DPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
PEL + +Y++ DV+S G L EL+ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 244 IIGEGSFGLAYKGLLQDGSLVVIKRHLQT--------QIQNFLHEVKHIARVHHRHLVKL 295
I+GEG FG Y+G+ + I ++T + F+ E + + H H+VKL
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
+G EE +++ Y P G + ++L ++ L + + +L K + +L S+
Sbjct: 79 IGIIEEEPTWIIMELY-PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI- 132
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--HHAGSTSAVDCFLDPELNLSKNY 413
H N+L+ K+ D+GL + + + A T ++ PE + +
Sbjct: 133 -NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 414 SAGSDVYSFGVFLLELIS 431
+ SDV+ F V + E++S
Sbjct: 192 TTASDVWMFAVCMWEILS 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 129 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 186
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 187 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 64 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 316 NVQNHLYD--SEGLPIGKL-----TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV 368
N+ +L +E +P L T+ + + AKG+E L S H N+
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR--KXIHRDLAARNI 175
Query: 369 LLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVF 425
LL E K+ D+GL + + G ++ PE + Y+ SDV+SFGV
Sbjct: 176 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 426 LLELIS 431
L E+ S
Sbjct: 236 LWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++++H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + H +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 136
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 137 RGLKYIHS--ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 55 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 166
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + H +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + YI ++ LY KL Q LS
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--------KLLKTQHLSNDHICYFLYQIL 136
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 137 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 64 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 316 NVQNHLYD--SEGLPIGKL-----TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV 368
N+ +L +E +P L T+ + + AKG+E L S H N+
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR--KXIHRDLAARNI 175
Query: 369 LLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVF 425
LL E K+ D+GL + + G ++ PE + Y+ SDV+SFGV
Sbjct: 176 LLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 426 LLELIS 431
L E+ S
Sbjct: 236 LWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 151
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 55 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 166
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H HH ++V L+G C + L+ I ++ G
Sbjct: 64 MLKEGATHSEHRALMSELKILIH------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 175
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 236 FGVLLWEIFS 245
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 195
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H HH ++V L+G C + L+ I ++ G
Sbjct: 66 MLKEGATHSEHRALMSELKILIH------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 316 NVQNHLYD--SEGLPIGK---------LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L +E +P + LT+ + + AKG+E L S H
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 177
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 178 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 237
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 238 FGVLLWEIFS 247
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 237 NNFSEINIIGEGSFGLAY---------------KGLLQDGSLVVIKRHLQTQIQNFLHEV 281
++F + ++G+GSFG + +L+ +L V R ++T+++ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR-VRTKMERDI--- 83
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+A V+H +VKL + + LI D++ G++ L K M +
Sbjct: 84 --LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--------SKEVMFTEEDVK 133
Query: 342 LGAAK---GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHAGSTS 397
A+ GL+HLHSL + + + N+LL+E K++D+GL K + A S
Sbjct: 134 FYLAELALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC 191
Query: 398 AVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVK 452
++ PE+ + +S +D +S+GV + E+++G LIL+ K
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK 246
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 93
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 153
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 154 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 211
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 212 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQIQ---- 275
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD 91
Query: 276 --NFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 83
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 144 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 201
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 202 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H HH ++V L+G C + L+ I ++ G
Sbjct: 64 MLKEGATHSEHRALMSELKILIH------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 175
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 236 FGVLLWEIFS 245
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V IK +TQ+ Q EV+ + ++H +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E LI +Y G V ++L + G++ ++ S +++
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYL-----VAHGRMKEKEARSKFRQIVSAVQYC 130
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + PEL K
Sbjct: 131 HQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK 188
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSG 210
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 55 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 166
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 40/320 (12%)
Query: 221 TQNLKQLTILELKHAT-----NNFSEI-NIIGEGSFGLAYKGLLQDGSLV----VIKRHL 270
T+NL ++ + +H T +F EI +G+G+FG YK ++ S++ VI
Sbjct: 15 TENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 271 QTQIQNFLHEVKHIARVHHRHLVKLV-GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPI 329
+ ++++++ E+ +A H ++VKL+ F EN+ +LI ++ G V + + E
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELE---- 129
Query: 330 GKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG 389
LT Q + L +LH + H + N+L + K++D+G+ T
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 390 S-HHAGSTSAVDCFLDPELNL-----SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNS 443
+ S ++ PE+ + + Y +DV+S G+ L+E+ H H +
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH---HELN 244
Query: 444 DQNLILQVKR------------SCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSSRRP 491
++L++ + S + ++ K L + T L V V S +P
Sbjct: 245 PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
Query: 492 SMRQIA-GELEGIQEREIGR 510
IA + E +E E G+
Sbjct: 305 IRELIAEAKAEVTEEVEDGK 324
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 101 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 212
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 272
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 273 FGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 257 LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLL-IYDYIPNG 315
+L++G+ R L ++++ +H I HH ++V L+G C + L+ I ++ G
Sbjct: 55 MLKEGATHSEHRALMSELKILIH----IG--HHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 316 NVQNHLYDS-----------EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFR 364
N+ +L E L LT+ + + AKG+E L S H
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLA 166
Query: 365 TSNVLLEENYTAKVSDYGLLKLVTGSH---HAGSTSAVDCFLDPELNLSKNYSAGSDVYS 421
N+LL E K+ D+GL + + G ++ PE + Y+ SDV+S
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 422 FGVFLLELIS 431
FGV L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 40/320 (12%)
Query: 221 TQNLKQLTILELKHAT-----NNFSEI-NIIGEGSFGLAYKGLLQDGSLV----VIKRHL 270
T+NL ++ + +H T +F EI +G+G+FG YK ++ S++ VI
Sbjct: 15 TENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 271 QTQIQNFLHEVKHIARVHHRHLVKLV-GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPI 329
+ ++++++ E+ +A H ++VKL+ F EN+ +LI ++ G V + + E
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELE---- 129
Query: 330 GKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKLVT 388
LT Q + L +LH + H + N+L + K++D+G+ K
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 389 GSHHAGSTSAVDCFLDPELNL-----SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNS 443
S ++ PE+ + + Y +DV+S G+ L+E+ H H +
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH---HELN 244
Query: 444 DQNLILQVKR------------SCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSSRRP 491
++L++ + S + ++ K L + T L V V S +P
Sbjct: 245 PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
Query: 492 SMRQIA-GELEGIQEREIGR 510
IA + E +E E G+
Sbjct: 305 IRELIAEAKAEVTEEVEDGK 324
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY 195
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQN-----FLHE 280
L++K + +++ +GEG F YK ++ + +V IK +++ ++ L E
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSI 340
+K + + H +++ L+ L++D++ +++ + D+ + LT +
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLV----LTPSHIKAY 117
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
L +GLE+LH + H + +N+LL+EN K++D+GL K + A V
Sbjct: 118 MLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 401 -CFLDPELNL-SKNYSAGSDVYSFGVFLLELI 430
+ PEL ++ Y G D+++ G L EL+
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 225 KQLTILELKHAT-NNFSEINIIGEGSFGLAYKG----LLQDGSLVVIKRHLQTQI----- 274
K +I +LK N + I +G G+FG Y+G + D S + + ++
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 103
Query: 275 -QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGK 331
+FL E I++ +H+++V+ +G ++ + ++ + + G++++ L ++ P
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 163
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVT 388
L M L +A A G ++L H N LL AK+ D+G+ + +
Sbjct: 164 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 221
Query: 389 GSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ + G ++ PE + +++ +D +SFGV L E+ S
Sbjct: 222 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 138/324 (42%), Gaps = 48/324 (14%)
Query: 221 TQNLKQLTILELKHAT-----NNFSEI-NIIGEGSFGLAYKGLLQDGSLV----VIKRHL 270
T+NL ++ + +H T +F EI +G+G+FG YK ++ S++ VI
Sbjct: 15 TENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 271 QTQIQNFLHEVKHIARVHHRHLVKLV-GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPI 329
+ ++++++ E+ +A H ++VKL+ F EN+ +LI ++ G V + + E
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELE---- 129
Query: 330 GKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT- 388
LT Q + L +LH + H + N+L + K++D+G+ T
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 389 ---------GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRN 439
G+ + + V C E + + Y +DV+S G+ L+E+ H
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMC----ETSKDRPYDYKADVWSLGITLIEMAEIEPPH--- 240
Query: 440 HSNSDQNLILQVKR------------SCDLGKYVDKTLGEQTVGAATEMMELALQCVDVS 487
H + ++L++ + S + ++ K L + T L V V
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
Query: 488 SRRPSMRQIA-GELEGIQEREIGR 510
S +P IA + E +E E G+
Sbjct: 301 SNKPIRELIAEAKAEVTEEVEDGK 324
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
++ ++ IGEG++G+ AY + + V IK+ QT Q L E+K + R H +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAA 345
++ + + + Y+ HL G + KL Q LS
Sbjct: 103 IIGINDIIRAPTIEQMKDVYL-----VTHLM---GADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTS---AVDC 401
+GL+++HS + H + SN+LL K+ D+GL ++ H H G + A
Sbjct: 155 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 402 FLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+ PE+ L SK Y+ D++S G L E++S R H N IL +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 239 FSEINIIGEGSFGLAYKGL-LQDGSLVVIK------RHLQTQIQNFLHEVKHIARVHHRH 291
FS++ IG GSFG Y +++ +V IK + + Q+ + EV+ + ++ H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
++ G H L+ +Y + L + P+ ++ + ++ GA +GL +L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIA---AVTHGALQGLAYL 170
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
HS + H + N+LL E K+ D+G ++ ++ T ++ PE+ L+
Sbjct: 171 HS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP---YWMAPEVILAM 225
Query: 412 N---YSAGSDVYSFGVFLLEL 429
+ Y DV+S G+ +EL
Sbjct: 226 DEGQYDGKVDVWSLGITCIEL 246
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 245 IGEGSFGLAYKGLLQD-GSLV---VIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
+G+G+FG YK ++ G+L VI+ + ++++++ E++ +A H ++VKL+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 301 ENHQQLLIYDYIPNGNVQNHLYD-SEGL--PIGKLTMRQRLSIALGAAKGLEHLHSLVPP 357
+ + ++ ++ P G V + + GL P ++ RQ L + L LHS
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-------EALNFLHS--KR 129
Query: 358 LFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLSKN---- 412
+ H + NVL+ +++D+G+ K + S ++ PE+ + +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 413 -YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRS 454
Y +D++S G+ L+E+ H H + ++L++ +S
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKS 229
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 245 IGEGSFGLAYKGLLQD-GSLV---VIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
+G+G+FG YK ++ G+L VI+ + ++++++ E++ +A H ++VKL+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 301 ENHQQLLIYDYIPNGNVQNHLYD-SEGL--PIGKLTMRQRLSIALGAAKGLEHLHSLVPP 357
+ + ++ ++ P G V + + GL P ++ RQ L + L LHS
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-------EALNFLHS--KR 137
Query: 358 LFHMHFRTSNVLLEENYTAKVSDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLSKN---- 412
+ H + NVL+ +++D+G+ K + S ++ PE+ + +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 413 -YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRS 454
Y +D++S G+ L+E+ H H + ++L++ +S
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKS 237
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 239 FSEINIIGEGSFGLAYKGL-LQDGSLVVIK------RHLQTQIQNFLHEVKHIARVHHRH 291
FS++ IG GSFG Y +++ +V IK + + Q+ + EV+ + ++ H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
++ G H L+ +Y + L + P+ ++ + ++ GA +GL +L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIA---AVTHGALQGLAYL 131
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
HS + H + N+LL E K+ D+G ++ ++ T ++ PE+ L+
Sbjct: 132 HS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP---YWMAPEVILAM 186
Query: 412 N---YSAGSDVYSFGVFLLEL 429
+ Y DV+S G+ +EL
Sbjct: 187 DEGQYDGKVDVWSLGITCIEL 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V IK +TQ+ Q EV+ + ++H +
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E LI +Y G V ++L + G++ ++ S +++
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYL-----VAHGRMKEKEARSKFRQIVSAVQYC 127
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + PEL K
Sbjct: 128 HQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGK 185
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSG 207
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 20/224 (8%)
Query: 233 KHATNNFSEINII---GEGSFGLAYKGLLQDGSLVV----IKRHLQTQIQNFLHEVKHIA 285
KH+ +F ++N + E G +KG Q +VV ++ + ++F E +
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLR 62
Query: 286 RVHHRHLVKLVGFCEE--NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
H +++ ++G C+ LI + P G++ N L++ + + Q + AL
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ---SQAVKFALD 119
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
A+G LH+L P + + +V ++E+ TA++S V S + ++
Sbjct: 120 XARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXAD----VKFSFQSPGRXYAPAWV 175
Query: 404 DPELNLSKNYSA---GSDVYSFGVFLLELISGREAHGRNHSNSD 444
PE K +D +SF V L EL++ RE + SN +
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELVT-REVPFADLSNXE 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 42/228 (18%)
Query: 237 NNFSEINIIGEGSFGLAY--KGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIARVHHRH 291
+F I +G G FG+ + K + D + + + L + + + EVK +A++ H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 292 LVKLV-GFCEENHQQLL------IYDYIPNGNVQNHLYDSEGLPI---GKLTMRQR---- 337
+V+ + E+N + L +Y YI Q L E L G+ T+ +R
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYI-----QMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 338 -LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK----------- 385
L I L A+ +E LHS L H + SN+ + KV D+GL+
Sbjct: 120 CLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 386 ---LVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELI 430
+ + H G ++ PE +YS D++S G+ L EL+
Sbjct: 178 LTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 268 RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL 327
R + ++ F EV + +++ H+++V ++ EE+ L+ +YI + ++
Sbjct: 49 REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--- 105
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-- 385
G L++ ++ G++H H + + H + N+L++ N T K+ D+G+ K
Sbjct: 106 --GPLSVDTAINFTNQILDGIKHAHDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161
Query: 386 ----LVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
L +H G+ + PE + +D+YS G+ L E++ G
Sbjct: 162 SETSLTQTNHVLGTVQ----YFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V +K +TQ+ Q EV+ + ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E L+ +Y G V ++L + G++ ++ + +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + + PEL K
Sbjct: 130 HQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGK 187
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQI----QNFLHEVKHIARVHHRHLVKLVGFCE 300
+G G+FG+ ++ + + V + + + T +E+ + ++HH L+ L E
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +LI +++ G L+D K++ + ++ A +GL+H+H + H
Sbjct: 119 DKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH--SIVH 172
Query: 361 MHFRTSNVLLE--ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSD 418
+ + N++ E + + K+ D+GL + T+A F PE+ + +D
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTD 232
Query: 419 VYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCD 456
+++ GV L+SG D + VKR CD
Sbjct: 233 MWAIGVLGYVLLSGLSPFA---GEDDLETLQNVKR-CD 266
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 34/227 (14%)
Query: 237 NNFSEINIIGEGSFGLAYKGLL-----QDGSLVVIKRHLQT-----QIQNFLHEVKHIAR 286
NN +G G+FG + +D L V + L++ + + + E+K ++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHL---------------YDSEGLPIG 330
+ H ++V L+G C L+I +Y G++ N L D EGL
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 331 K---LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV 387
L +R L + A+G+ L S H NVLL + AK+ D+GL + +
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 388 TGSHH---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
+ G+ ++ PE Y+ SDV+S+G+ L E+ S
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 237 NNFSEINIIGEGSFG-----LAYKGLLQDGSLVVIKRHLQ-----TQIQNFLHEVKHIAR 286
N S +G G+FG AY + D ++ V + L+ T+ + + E+K ++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT------------ 333
+ +H ++V L+G C L+I +Y G++ N L I T
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 334 -MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
+ LS + AKG+ L S H N+LL K+ D+GL + + +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 393 ---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G+ ++ PE + Y+ SDV+S+G+FL EL S
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 237 NNFSEINIIGEGSFGLAYKGLL-----QDGSLVVIKRHLQT-----QIQNFLHEVKHIAR 286
NN +G G+FG + +D L V + L++ + + + E+K ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSE---------GLPIGKLTMRQ 336
+ H ++V L+G C L+I +Y G++ N L + L+ R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---A 393
L + A+G+ L S H NVLL + AK+ D+GL + + +
Sbjct: 166 LLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G+ ++ PE Y+ SDV+S+G+ L E+ S
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V +K +TQ+ Q EV+ + ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E L+ +Y G V ++L + G++ ++ + +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + + PEL K
Sbjct: 130 HQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V +K +TQ+ Q EV+ + ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E L+ +Y G V ++L + G++ ++ + +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + + PEL K
Sbjct: 130 HQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 237 NNFSEINIIGEGSFG-----LAYKGLLQDGSLVVIKRHLQ-----TQIQNFLHEVKHIAR 286
N S +G G+FG AY + D ++ V + L+ T+ + + E+K ++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT------------ 333
+ +H ++V L+G C L+I +Y G++ N L I T
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 334 -MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
+ LS + AKG+ L S H N+LL K+ D+GL + + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 393 ---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G+ ++ PE + Y+ SDV+S+G+FL EL S
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 42/294 (14%)
Query: 237 NNFSEINIIGEGSFG-----LAYKGLLQDGSLVVIKRHLQ-----TQIQNFLHEVKHIAR 286
N S +G G+FG AY + D ++ V + L+ T+ + + E+K ++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT------------ 333
+ +H ++V L+G C L+I +Y G++ N L I T
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 334 -MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
+ LS + AKG+ L S H N+LL K+ D+GL + + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 393 ---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLI 448
G+ ++ PE + Y+ SDV+S+G+FL EL S G + D
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP--GMPVDSKFY 281
Query: 449 LQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSS-RRPSMRQIAGELE 501
+K + L + A EM ++ C D +RP+ +QI +E
Sbjct: 282 KMIKEGF-------RMLSPE--HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 35/235 (14%)
Query: 237 NNFSEINIIGEGSFGLAY---------------KGLLQDGSLVVIKRHLQTQIQNFLHEV 281
+ F + ++G+GSFG + +L+ +L V R ++T+++ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDI--- 79
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ V+H +VKL + + LI D++ G++ L K M +
Sbjct: 80 --LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--------SKEVMFTEEDVK 129
Query: 342 LGAAK---GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHAGSTS 397
A+ L+HLHSL + + + N+LL+E K++D+GL K + A S
Sbjct: 130 FYLAELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 398 AVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVK 452
++ PE+ + ++ +D +SFGV + E+++G +IL+ K
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 42/294 (14%)
Query: 237 NNFSEINIIGEGSFG-----LAYKGLLQDGSLVVIKRHLQ-----TQIQNFLHEVKHIAR 286
N S +G G+FG AY + D ++ V + L+ T+ + + E+K ++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT------------ 333
+ +H ++V L+G C L+I +Y G++ N L I T
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 334 -MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
+ LS + AKG+ L S H N+LL K+ D+GL + + +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 393 ---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLI 448
G+ ++ PE + Y+ SDV+S+G+FL EL S G + D
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP--GMPVDSKFY 276
Query: 449 LQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSS-RRPSMRQIAGELE 501
+K + L + A EM ++ C D +RP+ +QI +E
Sbjct: 277 KMIKEGF-------RMLSPE--HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIK--RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEEN 302
+G G FG + + V +K + ++ FL E + + H LVKL +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 248
Query: 303 HQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMH 362
+I +++ G++ + L EG K + + + + A+G+ + H
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQR--NYIHRD 303
Query: 363 FRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSF 422
R +N+L+ + K++D+GL ++ G+ +A PE +++ SDV+SF
Sbjct: 304 LRAANILVSASLVCKIADFGLARV--GAKFPIKWTA------PEAINFGSFTIKSDVWSF 355
Query: 423 GVFLLELIS 431
G+ L+E+++
Sbjct: 356 GILLMEIVT 364
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 244 IIGEGSFG-----LAYKGLLQDG-SLVVIKRHLQ-----TQIQNFLHEVKHIARV-HHRH 291
++G G+FG AY G+ + G S+ V + L+ ++ + + E+K + ++ H +
Sbjct: 52 VLGSGAFGKVMNATAY-GISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHL-------------YDS-----EGLPIGKLT 333
+V L+G C + LI++Y G++ N+L Y++ E + LT
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 334 MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHH 392
L A AKG+E L H NVL+ K+ D+GL + +++ S++
Sbjct: 171 FEDLLCFAYQVAKGMEFLE--FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 393 A--GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G+ ++ PE Y+ SDV+S+G+ L E+ S
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 42/294 (14%)
Query: 237 NNFSEINIIGEGSFG-----LAYKGLLQDGSLVVIKRHLQ-----TQIQNFLHEVKHIAR 286
N S +G G+FG AY + D ++ V + L+ T+ + + E+K ++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT------------ 333
+ +H ++V L+G C L+I +Y G++ N L I T
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 334 -MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
+ LS + AKG+ L S H N+LL K+ D+GL + + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 393 ---AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLI 448
G+ ++ PE + Y+ SDV+S+G+FL EL S G + D
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP--GMPVDSKFY 281
Query: 449 LQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSS-RRPSMRQIAGELE 501
+K + L + A EM ++ C D +RP+ +QI +E
Sbjct: 282 KMIKEGF-------RMLSPE--HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQDGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRHL 292
+ ++ +GEG++G+ YK G +V +KR L + + + E+ + +HH ++
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG--KLTMRQRLSIALGAAKGLEH 350
V L+ L+++++ + + GL K+ + Q L +G+ H
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLL-------RGVAH 134
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELNL 409
H + H + N+L+ + K++D+GL + + + V + P++ +
Sbjct: 135 CHQ--HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 410 -SKNYSAGSDVYSFGVFLLELISGR 433
SK YS D++S G E+I+G+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 225 KQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEV--- 281
K+ L++K +F ++G+GSFG + + + + L+ + +V
Sbjct: 6 KERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 65
Query: 282 ---KHIARVHHRHLVKLVGFC--EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
K + + H FC + + +Y+ G++ H+ + + T
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-- 123
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKL-VTGSHHAGS 395
A GL+ LHS + + + N+LL+++ K++D+G+ K + G
Sbjct: 124 ---YAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE 178
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREA-HGRN 439
++ PE+ L + Y+ D +SFGV L E++ G+ HG++
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENH- 303
IG+G FG ++G + G V +K + +++ E + V RH ++GF ++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRH-ENILGFIAADNK 107
Query: 304 ------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV-- 355
Q L+ DY +G++ ++L +T+ + +AL A GL HLH +
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 356 ----PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---------- 401
P + H ++ N+L+++N T ++D GL H +T +D
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDIAPNHRVGTKR 216
Query: 402 -----FLDPELNLSKNYS-AGSDVYSFGVFLLEL 429
LD +N+ S +D+Y+ G+ E+
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQDGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRHL 292
+ ++ +GEG++G+ YK G +V +KR L + + + E+ + +HH ++
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG--KLTMRQRLSIALGAAKGLEH 350
V L+ L+++++ + + GL K+ + Q L +G+ H
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLL-------RGVAH 134
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELNL 409
H + H + N+L+ + K++D+GL + + + V + P++ +
Sbjct: 135 CHQ--HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 410 -SKNYSAGSDVYSFGVFLLELISGR 433
SK YS D++S G E+I+G+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENH- 303
IG+G FG ++G + G V +K + +++ E + V RH ++GF ++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRH-ENILGFIAADNK 74
Query: 304 ------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV-- 355
Q L+ DY +G++ ++L +T+ + +AL A GL HLH +
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 356 ----PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---------- 401
P + H ++ N+L+++N T ++D GL H +T +D
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDIAPNHRVGTKR 183
Query: 402 -----FLDPELNLSKNYS-AGSDVYSFGVFLLEL 429
LD +N+ S +D+Y+ G+ E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFL-----HEVKHIARVHHRHLV 293
F++++ IG+GSFG YKG+ VV + + + E+ +++ ++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
+ G ++ + +I +Y+ G+ + L G L +I KGL++LHS
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKP------GPLEETYIATILREILKGLDYLHS 134
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH-HAGSTSAVDCFLDPELNLSKN 412
H + +NVLL E K++D+G+ +T + ++ PE+
Sbjct: 135 --ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 413 YSAGSDVYSFGVFLLELISGREAHGRNH 440
Y +D++S G+ +EL G + H
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLH 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENH- 303
IG+G FG ++G + G V +K + +++ E + V RH ++GF ++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRH-ENILGFIAADNK 94
Query: 304 ------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV-- 355
Q L+ DY +G++ ++L +T+ + +AL A GL HLH +
Sbjct: 95 DNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 356 ----PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---------- 401
P + H ++ N+L+++N T ++D GL H +T +D
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDIAPNHRVGTKR 203
Query: 402 -----FLDPELNLSKNYS-AGSDVYSFGVFLLEL 429
LD +N+ S +D+Y+ G+ E+
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 22/229 (9%)
Query: 232 LKHATNNFSEINIIGEGSFGLAYKG--LLQDGSLVVIKR-HLQTQIQNF----LHEV--- 281
L A + + IGEG++G +K L G V +KR +QT + + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 282 KHIARVHHRHLVKLVGFC-----EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+H+ H ++V+L C + + L+++++ + ++ +L + +P +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTET 121
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+ LHS + H + N+L+ + K++D+GL ++ + S
Sbjct: 122 IKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 397 SAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
+ PE+ L +Y+ D++S G E+ R+ R S+ DQ
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V ++ +TQ+ Q EV+ + ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E L+ +Y G V ++L + G++ ++ + +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + + PEL K
Sbjct: 130 HQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENH- 303
IG+G FG ++G + G V +K + +++ E + V RH ++GF ++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRH-ENILGFIAADNK 69
Query: 304 ------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV-- 355
Q L+ DY +G++ ++L +T+ + +AL A GL HLH +
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 356 ----PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---------- 401
P + H ++ N+L+++N T ++D GL H +T +D
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDIAPNHRVGTKR 178
Query: 402 -----FLDPELNLSKNYS-AGSDVYSFGVFLLEL 429
LD +N+ S +D+Y+ G+ E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENH- 303
IG+G FG ++G + G V +K + +++ E + V RH ++GF ++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRH-ENILGFIAADNK 71
Query: 304 ------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV-- 355
Q L+ DY +G++ ++L +T+ + +AL A GL HLH +
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 356 ----PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---------- 401
P + H ++ N+L+++N T ++D GL H +T +D
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDIAPNHRVGTKR 180
Query: 402 -----FLDPELNLSKNYS-AGSDVYSFGVFLLEL 429
LD +N+ S +D+Y+ G+ E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 121
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 122 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 179
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENH- 303
IG+G FG ++G + G V +K + +++ E + V RH ++GF ++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRH-ENILGFIAADNK 68
Query: 304 ------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV-- 355
Q L+ DY +G++ ++L +T+ + +AL A GL HLH +
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 356 ----PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC---------- 401
P + H ++ N+L+++N T ++D GL H +T +D
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVRHDSATDTIDIAPNHRVGTKR 177
Query: 402 -----FLDPELNLSKNYS-AGSDVYSFGVFLLEL 429
LD +N+ S +D+Y+ G+ E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + ++++ + S G+P+ + S +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
E+ L K YS D++S G E+++ R A S DQ
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 216 VSPIDTQNLKQLTILELKHATNNFSEI-----NIIGEGSFGLAYKGLLQDGSLVVIKRHL 270
++P+D N K + +L T EI +IG GSFG+ ++ L + V IK+ L
Sbjct: 15 LNPLDDPN-KVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL 73
Query: 271 QTQIQNFLHEVKHIAR-VHHRHLVKLVGFCEENHQQL------LIYDYIPNGNVQ----- 318
Q + F + I R V H ++V L F N + L+ +Y+P +
Sbjct: 74 QD--KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY 131
Query: 319 NHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE-ENYTAK 377
L + + + KL M Q L + L ++HS+ + H + N+LL+ + K
Sbjct: 132 AKLKQTMPMLLIKLYMYQLL-------RSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLK 182
Query: 378 VSDYGLLKLVTGSHHAGSTSAVDCFLDPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
+ D+G K++ S + PEL + NY+ D++S G + EL+ G+
Sbjct: 183 LIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 22/229 (9%)
Query: 232 LKHATNNFSEINIIGEGSFGLAYKG--LLQDGSLVVIKR-HLQTQIQNF----LHEV--- 281
L A + + IGEG++G +K L G V +KR +QT + + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 282 KHIARVHHRHLVKLVGFC-----EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+H+ H ++V+L C + + L+++++ + ++ +L + +P +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTET 121
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+ LHS + H + N+L+ + K++D+GL ++ + S
Sbjct: 122 IKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 397 SAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
+ PE+ L +Y+ D++S G E+ R+ R S+ DQ
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLS 117
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 118 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 124
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 125 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 22/229 (9%)
Query: 232 LKHATNNFSEINIIGEGSFGLAYKG--LLQDGSLVVIKR-HLQTQIQNF----LHEV--- 281
L A + + IGEG++G +K L G V +KR +QT + + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 282 KHIARVHHRHLVKLVGFC-----EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+H+ H ++V+L C + + L+++++ + ++ +L + +P +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTET 121
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+ LHS + H + N+L+ + K++D+GL ++ + S
Sbjct: 122 IKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 397 SAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
+ PE+ L +Y+ D++S G E+ R+ R S+ DQ
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 29/232 (12%)
Query: 237 NNFSEINIIGEGSFGLAY---------------KGLLQDGSLVVIKRHLQTQIQNFLHEV 281
+ F + ++G+GSFG + +L+ +L V R ++T+++ +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDI--- 80
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ V+H +VKL + + LI D++ G++ L S+ + + ++ L+
Sbjct: 81 --LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-- 134
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHAGSTSAVD 400
A L+HLHSL + + + N+LL+E K++D+GL K + A S
Sbjct: 135 -ELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVK 452
++ PE+ + ++ +D +SFGV + E+++G +IL+ K
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 243
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 29/232 (12%)
Query: 237 NNFSEINIIGEGSFGLAY---------------KGLLQDGSLVVIKRHLQTQIQNFLHEV 281
+ F + ++G+GSFG + +L+ +L V R ++T+++ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDI--- 79
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ V+H +VKL + + LI D++ G++ L S+ + + ++ L+
Sbjct: 80 --LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-- 133
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHAGSTSAVD 400
A L+HLHSL + + + N+LL+E K++D+GL K + A S
Sbjct: 134 -ELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVK 452
++ PE+ + ++ +D +SFGV + E+++G +IL+ K
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ +L V + + + FL E + + H H+VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 78 GVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES--K 130
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNYS 414
H NVL+ N K+ D+GL + + S ++ S + ++ PE + ++
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 191 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 239
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V +K +TQ+ Q EV+ ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E L+ +Y G V ++L + G+ ++ + +++
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYL-----VAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + + PEL K
Sbjct: 130 HQKF--IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGK 187
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + ++++ + S G+P+ + S +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIK-----SYLFQLLQ 116
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 117 GLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + ++++ + S G+P+ + S +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 115 GLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ +L V + + + FL E + + H H+VKL+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 106 GVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES--K 158
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNYS 414
H NVL+ N K+ D+GL + + S ++ S + ++ PE + ++
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 219 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 267
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 268 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 301
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 118 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 117 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 118 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 115
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + + V + P
Sbjct: 116 GLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 17/220 (7%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEV------KH 283
L++K +F ++G+GSFG + + + + L+ + +V K
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR 69
Query: 284 IARVHHRHLVKLVGFC--EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ + H FC + + +Y+ G++ H+ + + T A
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YA 124
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKL-VTGSHHAGSTSAVD 400
GL+ LHS + + + N+LL+++ K++D+G+ K + G
Sbjct: 125 AEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP 182
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELISGREA-HGRN 439
++ PE+ L + Y+ D +SFGV L E++ G+ HG++
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 124
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 125 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 409 L-SKNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ +L V + + + FL E + + H H+VKL+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 83 GVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES--K 135
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNYS 414
H NVL+ N K+ D+GL + + S ++ S + ++ PE + ++
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 196 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 244
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 245 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V ++ +TQ+ Q EV+ + ++H +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E L+ +Y G V ++L + G++ ++ + +++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + PEL K
Sbjct: 130 HQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGK 187
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 118 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
E+ L K YS D++S G E+++ R A S DQ
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 237 NNFSEINIIGEGSFGLAYKGLL-----QDGSLVVIKRHLQT-----QIQNFLHEVKHIAR 286
NN +G G+FG + +D L V + L++ + + + E+K ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 287 V-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLY-------DSEGLPIGKLTMRQR- 337
+ H ++V L+G C L+I +Y G++ N L I T R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 338 -LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH---A 393
L + A+G+ L S H NVLL + AK+ D+GL + + +
Sbjct: 166 LLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G+ ++ PE Y+ SDV+S+G+ L E+ S
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 114/275 (41%), Gaps = 31/275 (11%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ +L V + + + FL E + + H H+VKL+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSE-GLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G EN +I + G +++ L + L + L + A + L +L S
Sbjct: 80 GVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQLSTALAYLES-- 131
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNY 413
H NVL+ N K+ D+GL + + S ++ S + ++ PE + +
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 414 SAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAA 473
++ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 192 TSASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCP 240
Query: 474 TEMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 241 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 275
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ +L V + + + FL E + + H H+VKL+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 75 GVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES--K 127
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNYS 414
H NVL+ N K+ D+GL + + S ++ S + ++ PE + ++
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 188 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 236
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 237 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 270
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSE----GLPIGKLTMRQRLSIALGA 344
H ++VKL+ ++ L+++++ + +++ + S LP+ K + Q L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLL------ 116
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL- 403
+GL HS + H + N+L+ K++D+GL + V +
Sbjct: 117 -QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 404 DPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
PE+ L K YS D++S G E+++ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 238 NFSEINIIGEGSFGLAYKG-LLQDGSLVVIKR------HLQTQIQNFLHEVKHIARVHHR 290
+F N++G+GSF Y+ + G V IK + +Q +EVK ++ H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEH 350
+++L + E+++ L+ + NG + +L + P + R + + G+ +
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQII---TGMLY 127
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST-SAVDCFLDPELNL 409
LHS + H SN+LL N K++D+GL + H T ++ PE+
Sbjct: 128 LHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 410 SKNYSAGSDVYSFGVFLLELISGR 433
+ SDV+S G L+ GR
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ +L V + + + FL E + + H H+VKL+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 81 GVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES--K 133
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNYS 414
H NVL+ N K+ D+GL + + S ++ S + ++ PE + ++
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 194 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 242
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 243 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 276
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 209 ISPYPGAVSPIDTQNLKQLTILELKHAT-NNFSEINIIGEGSFG-LAYKGLLQDGSLVVI 266
++P+ + I Q LE + T N F + ++G+G FG + + G +
Sbjct: 155 VAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYAC 214
Query: 267 KRHLQTQIQNF------LHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNH 320
K+ + +I+ L+E + + +V+ R +V L E L+ + G+++ H
Sbjct: 215 KKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 274
Query: 321 LY--DSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKV 378
+Y G P + A GLE LH + + + N+LL+++ ++
Sbjct: 275 IYHMGQAGFPEARAVF-----YAAEICCGLEDLHR--ERIVYRDLKPENILLDDHGHIRI 327
Query: 379 SDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
SD GL + + G G V ++ PE+ ++ Y+ D ++ G L E+I+G+
Sbjct: 328 SDLGLAVHVPEGQTIKGRVGTVG-YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 409 L-SKNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 117 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 116
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 117 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 116
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 117 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 23/224 (10%)
Query: 244 IIGE-GSFGLAYKGLLQDGSLV----VIKRHLQTQIQNFLHEVKHIARVHHRHLVKLV-G 297
IIGE G FG YK ++ S++ VI + ++++++ E+ +A H ++VKL+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 298 FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPP 357
F EN+ +LI ++ G V + + E LT Q + L +LH
Sbjct: 76 FYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLHD--NK 128
Query: 358 LFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--HHAGSTSAVDCFLDPELNL-----S 410
+ H + N+L + K++D+G+ T + S ++ PE+ +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 411 KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRS 454
+ Y +DV+S G+ L+E+ H H + ++L++ +S
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKS 229
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSE----GLPIGKLTMRQRLSIALGA 344
H ++VKL+ ++ L+++++ + +++ + S LP+ K + Q L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL------ 116
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL- 403
+GL HS + H + N+L+ K++D+GL + V +
Sbjct: 117 -QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 404 DPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
PE+ L K YS D++S G E+++ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSE----GLPIGKLTMRQRLSIALGA 344
H ++VKL+ ++ L+++++ + +++ + S LP+ K + Q L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL------ 114
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL- 403
+GL HS + H + N+L+ K++D+GL + V +
Sbjct: 115 -QGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 404 DPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
PE+ L K YS D++S G E+++ R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 115 GLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ ++ V + + + FL E + + H H+VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 78 GVITEN-PVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES--K 130
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNYS 414
H NVL+ N K+ D+GL + + S ++ S + ++ PE + ++
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 191 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 239
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 115 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 18/255 (7%)
Query: 210 SPYPGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQD-----GSLV 264
S Y V I Q Q ++ H +++ +G G+FG+ ++ + +
Sbjct: 130 SNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF 189
Query: 265 VIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS 324
V+ H ++ + E++ ++ + H LV L E++++ ++IY+++ G + + D
Sbjct: 190 VMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE 248
Query: 325 EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLL--EENYTAKVSDYG 382
K++ + + KGL H+H H+ + N++ + + K+ D+G
Sbjct: 249 HN----KMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFG 302
Query: 383 LLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSN 442
L + T+ F PE+ K +D++S GV L+SG G
Sbjct: 303 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG---GE 359
Query: 443 SDQNLILQVKRSCDL 457
+D + VK SCD
Sbjct: 360 NDDETLRNVK-SCDW 373
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 118
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 119 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 115
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 116 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 238 NFSEINIIGEGSFG-LAYKGLLQDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRH 291
N+ + IG+G+F + + G V +K +TQ+ Q EV+ + ++H +
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VKL E L+ +Y G V ++L + G + ++ + +++
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGWMKEKEARAKFRQIVSAVQYC 122
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
H + H + N+LL+ + K++D+G T + + + PEL K
Sbjct: 123 HQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 180
Query: 412 NYSAGS-DVYSFGVFLLELISG 432
Y DV+S GV L L+SG
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSG 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 115 GLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 116
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 117 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 115 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQ-------IQNFLHEVKHIARVHH 289
++F + IG+GSFG D + +++ Q ++N E++ + + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
LV L ++ ++ D + G+++ HL + + + T++ + + A L+
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEETVKLFICELVMALDYLQ 132
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNL 409
+ + H + N+LL+E+ ++D+ + ++ + + ++ PE+
Sbjct: 133 NQR-----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFS 187
Query: 410 SKN---YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLI 448
S+ YS D +S GV EL+ GR + S S + ++
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 272 TQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGK 331
T +Q EV+ + ++H ++VKL E L+ +Y G V ++L + G+
Sbjct: 56 TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGR 110
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
+ ++ + +++ H + H + N+LL+ + K++D+G T +
Sbjct: 111 MKEKEARAKFRQIVSAVQYCHQKY--IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
Query: 392 HAGSTSAVDCFLDPELNLSKNYSAGS-DVYSFGVFLLELISG 432
+ + PEL K Y DV+S GV L L+SG
Sbjct: 169 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVH 288
+ NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAK 346
H ++VKL+ ++ L+++++ + +++ + S G+P+ + S +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 115
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DP 405
GL HS + H + N+L+ K++D+GL + V + P
Sbjct: 116 GLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L K YS D++S G E+++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + V + PE+
Sbjct: 117 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + V + PE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 238 NFSEINIIGEGSFG---LAYKGLL-QDGSLVVI------KRHLQTQIQNFLHEVKHIARV 287
N+ + +GEGSFG LAY Q +L +I K +Q +I+ E+ ++ +
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLL 61
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ--RLSIALGAA 345
H H++KL + + +++ +Y N L+D + K++ ++ R + +A
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYI-VQRDKMSEQEARRFFQQIISA 115
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
H H +V H + N+LL+E+ K++D+GL ++T + ++ + P
Sbjct: 116 VEYCHRHKIV----HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 171
Query: 406 ELNLSKNYSAGS-DVYSFGVFLLELISGR 433
E+ K Y+ DV+S GV L ++ R
Sbjct: 172 EVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 264 VVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQN 319
V IKR QT + L E++ +++ HH ++V + L+ + G+V +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 320 ---HLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA 376
H+ G L +I +GLE+LH H + N+LL E+ +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK--NGQIHRDVKAGNILLGEDGSV 155
Query: 377 KVSDYGLLKL------VTGSHHAGSTSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLEL 429
+++D+G+ +T + + C++ PE + + Y +D++SFG+ +EL
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 430 ISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSSR 489
+G + + L LQ DK + ++ + +M+ L LQ +
Sbjct: 216 ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQ------K 269
Query: 490 RPSMRQIAGEL 500
P R A EL
Sbjct: 270 DPEKRPTAAEL 280
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 264 VVIKR----HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQN 319
V IKR QT + L E++ +++ HH ++V + L+ + G+V +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 320 ---HLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA 376
H+ G L +I +GLE+LH H + N+LL E+ +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK--NGQIHRDVKAGNILLGEDGSV 160
Query: 377 KVSDYGLLKL------VTGSHHAGSTSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLEL 429
+++D+G+ +T + + C++ PE + + Y +D++SFG+ +EL
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 430 ISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAATEMMELALQCVDVSSR 489
+G + + L LQ DK + ++ + +M+ L LQ +
Sbjct: 221 ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQ------K 274
Query: 490 RPSMRQIAGEL 500
P R A EL
Sbjct: 275 DPEKRPTAAEL 285
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 30/288 (10%)
Query: 185 KRRIRRSEGESSVPSPSAELERGDISPYPGAVSPI-----DTQNLKQLTILELKHATNNF 239
+RRI + P P+ P P S D + LK + LK
Sbjct: 281 QRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLF-LKRDNLLI 339
Query: 240 SEINIIGEGSFGLAYKGLLQ------DGSLVVIKRHLQ-TQIQNFLHEVKHIARVHHRHL 292
++I + G G+FG +G+ + D ++ V+K+ + + + E + + ++ + ++
Sbjct: 340 ADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLY-DSEGLPIGKLT-MRQRLSIALGAAKGLEH 350
V+L+G C+ +L+ + G + L E +P+ + + ++S+ + K LE
Sbjct: 399 VRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM---KYLEE 454
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHAGSTSAVDCFLD---PE 406
+ H + NVLL + AK+SD+GL K L + + SA L PE
Sbjct: 455 KN-----FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
Query: 407 LNLSKNYSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLILQVKR 453
+ +S+ SDV+S+GV + E +S G++ + + I Q KR
Sbjct: 510 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR 557
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 209 ISPYPGAVSPIDTQNLKQLTILELKHAT-NNFSEINIIGEGSFG-LAYKGLLQDGSLVVI 266
++P+ + I Q LE + T N F + ++G+G FG + + G +
Sbjct: 155 VAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYAC 214
Query: 267 KRHLQTQIQNF------LHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNH 320
K+ + +I+ L+E + + +V+ R +V L E L+ + G+++ H
Sbjct: 215 KKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 274
Query: 321 LY--DSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKV 378
+Y G P + A GLE LH + + + N+LL+++ ++
Sbjct: 275 IYHMGQAGFPEARAVF-----YAAEICCGLEDLHR--ERIVYRDLKPENILLDDHGHIRI 327
Query: 379 SDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
SD GL + + G G V ++ PE+ ++ Y+ D ++ G L E+I+G+
Sbjct: 328 SDLGLAVHVPEGQTIKGRVGTVG-YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK + G +V +K+ L T+ + + E+ + ++H +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + V + PE+
Sbjct: 119 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 238 NFSEINIIGEGSFG---LAYKGLL-QDGSLVVI------KRHLQTQIQNFLHEVKHIARV 287
N+ + +GEGSFG LAY Q +L +I K +Q +I+ E+ ++ +
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLL 65
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ--RLSIALGAA 345
H H++KL + + +++ +Y N L+D + K++ ++ R + +A
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYI-VQRDKMSEQEARRFFQQIISA 119
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
H H +V H + N+LL+E+ K++D+GL ++T + ++ + P
Sbjct: 120 VEYCHRHKIV----HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 175
Query: 406 ELNLSKNYSAGS-DVYSFGVFLLELISGR 433
E+ K Y+ DV+S GV L ++ R
Sbjct: 176 EVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 238 NFSEINIIGEGSFG---LAYKGLL-QDGSLVVI------KRHLQTQIQNFLHEVKHIARV 287
N+ + +GEGSFG LAY Q +L +I K +Q +I+ E+ ++ +
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLL 71
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ--RLSIALGAA 345
H H++KL + + +++ +Y N L+D + K++ ++ R + +A
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYI-VQRDKMSEQEARRFFQQIISA 125
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
H H +V H + N+LL+E+ K++D+GL ++T + ++ + P
Sbjct: 126 VEYCHRHKIV----HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 181
Query: 406 ELNLSKNYSAGS-DVYSFGVFLLELISGR 433
E+ K Y+ DV+S GV L ++ R
Sbjct: 182 EVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 238 NFSEINIIGEGSFG---LAYKGLL-QDGSLVVI------KRHLQTQIQNFLHEVKHIARV 287
N+ + +GEGSFG LAY Q +L +I K +Q +I+ E+ ++ +
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLL 70
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ--RLSIALGAA 345
H H++KL + + +++ +Y N L+D + K++ ++ R + +A
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYI-VQRDKMSEQEARRFFQQIISA 124
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
H H +V H + N+LL+E+ K++D+GL ++T + ++ + P
Sbjct: 125 VEYCHRHKIV----HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 180
Query: 406 ELNLSKNYSAGS-DVYSFGVFLLELISGR 433
E+ K Y+ DV+S GV L ++ R
Sbjct: 181 EVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 108/254 (42%), Gaps = 18/254 (7%)
Query: 210 SPYPGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQD-----GSLV 264
S Y V I Q Q ++ H +++ +G G+FG+ ++ + +
Sbjct: 24 SNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF 83
Query: 265 VIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS 324
V+ H ++ + E++ ++ + H LV L E++++ ++IY+++ G + + D
Sbjct: 84 VMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE 142
Query: 325 EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLL--EENYTAKVSDYG 382
K++ + + KGL H+H H+ + N++ + + K+ D+G
Sbjct: 143 HN----KMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFG 196
Query: 383 LLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSN 442
L + T+ F PE+ K +D++S GV L+SG G
Sbjct: 197 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG---GE 253
Query: 443 SDQNLILQVKRSCD 456
+D + VK SCD
Sbjct: 254 NDDETLRNVK-SCD 266
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 220 DTQNLKQL-TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR-HLQTQIQN 276
D + L++L +I+ + ++ IG+G+ G Y + + G V I++ +LQ Q +
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 277 --FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS---EGLPIGK 331
++E+ + + ++V + + ++ +Y+ G++ + + ++ EG
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----- 116
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
Q ++ + LE LHS + H ++ N+LL + + K++D+G +T
Sbjct: 117 ----QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 392 HAGSTSA-VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
ST ++ PE+ K Y D++S G+ +E+I G
Sbjct: 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGL--LQDGSLVVIKRHLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK L + + K L T+ + + E+ + ++H +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 118 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 238 NFSEINIIGEGSFGLAYKGL--LQDGSLVVIKRHLQTQIQNF----LHEVKHIARVHHRH 291
NF ++ IGEG++G+ YK L + + K L T+ + + E+ + ++H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS--EGLPIGKLTMRQRLSIALGAAKGLE 349
+VKL+ ++ L+++++ + +++ + S G+P+ + S +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELN 408
HS + H + N+L+ K++D+GL + + V + PE+
Sbjct: 117 FCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 409 LS-KNYSAGSDVYSFGVFLLELISGR 433
L K YS D++S G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ ++ V + + + FL E + + H H+VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 78 GVITEN-PVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLES--K 130
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--HHAGSTSAVDCFLDPELNLSKNYS 414
H NVL+ N K+ D+GL + + S A ++ PE + ++
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 191 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 239
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 220 DTQNLKQL-TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR-HLQTQIQN 276
D + L++L I+ + ++ IG+G+ G Y + + G V I++ +LQ Q +
Sbjct: 3 DEEILEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 62
Query: 277 --FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS---EGLPIGK 331
++E+ + + ++V + + ++ +Y+ G++ + + ++ EG
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----- 117
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
Q ++ + LE LHS + H + ++ N+LL + + K++D+G +T
Sbjct: 118 ----QIAAVCRECLQALEFLHS--NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 392 HAGSTSA-VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
ST ++ PE+ K Y D++S G+ +E+I G
Sbjct: 172 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHI 284
+ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ +
Sbjct: 1 MELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIA 341
+ ++V G + + + +++ G++ L + +P +GK ++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VS 110
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
+ KGL +L + H + SN+L+ K+ D+G+ + S A S
Sbjct: 111 IAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRS 168
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE +YS SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHI 284
+ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ +
Sbjct: 1 MELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIA 341
+ ++V G + + + +++ G++ L + +P +GK ++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VS 110
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
+ KGL +L + H + SN+L+ K+ D+G+ + S A S
Sbjct: 111 IAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRS 168
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE +YS SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRK-----IGSFDETCTRFYTAEIVSALE 146
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + S V ++ PE
Sbjct: 147 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ S SD+++ G + +L++G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 245 IGEGSFGLAYKGLLQDGS-------LVVIKRHLQTQ---IQNFLHEVKHIARVHHRHLVK 294
+G+GSFG+ +G S + +K + +Q + +F+ EV + + HR+L++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGAAKGLEHLHS 353
L G ++ + + P G++ + L +G +G L+ A+ A+G+ +L S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES 133
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGST--SAVDCFLDPELNL 409
H N+LL K+ D+GL++ + H+ + PE
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ +S SD + FGV L E+ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHI 284
+ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ +
Sbjct: 1 MELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIA 341
+ ++V G + + + +++ G++ L + +P +GK ++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VS 110
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
+ KGL +L + H + SN+L+ K+ D+G+ + S A S
Sbjct: 111 IAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRS 168
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE +YS SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHI 284
+ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ +
Sbjct: 1 MELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIA 341
+ ++V G + + + +++ G++ L + +P +GK ++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VS 110
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
+ KGL +L + H + SN+L+ K+ D+G+ + S A S
Sbjct: 111 IAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRS 168
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE +YS SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHI 284
+ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ +
Sbjct: 1 MELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIA 341
+ ++V G + + + +++ G++ L + +P +GK ++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VS 110
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
+ KGL +L + H + SN+L+ K+ D+G+ + S A S
Sbjct: 111 IAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRS 168
Query: 402 FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE +YS SD++S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ A ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINAMLNH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMA--GVV 119
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 35/232 (15%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQN--------FLHEVKHIA 285
AT+ + + IG G++G YK G V +K ++ N + EV +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALLR 58
Query: 286 RVH---HRHLVKLVGFCEENH-----QQLLIYDYIPNGNVQNHLYDSE--GLPIGKLT-- 333
R+ H ++V+L+ C + + L+++++ + +++ +L + GLP +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 117
Query: 334 MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA 393
MRQ L +GL+ LH+ + H + N+L+ T K++D+GL ++ +
Sbjct: 118 MRQFL-------RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 168
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
+ PE+ L Y+ D++S G E+ + N S +DQ
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQ 219
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 231 ELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHIA 285
ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ +
Sbjct: 64 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIAL 342
+ ++V G + + + +++ G++ L + +P +GK +++
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VSI 173
Query: 343 GAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCF 402
KGL +L + H + SN+L+ K+ D+G+ + S A S +
Sbjct: 174 AVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSY 231
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE +YS SD++S G+ L+E+ GR
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 31/275 (11%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ ++ V + + + FL E + + H H+VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSE-GLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G EN +I + G +++ L + L + L + A + L +L S
Sbjct: 458 GVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLIL-----YAYQLSTALAYLES-- 509
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNY 413
H NVL+ N K+ D+GL + + S ++ S + ++ PE + +
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 414 SAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAA 473
++ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 570 TSASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCP 618
Query: 474 TEMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 619 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHIARVHHRH 291
++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ + + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIALGAAKGL 348
+V G + + + +++ G++ L + +P +GK +++ KGL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VSIAVIKGL 144
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELN 408
+L + H + SN+L+ K+ D+G+ + S A S ++ PE
Sbjct: 145 TYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERL 202
Query: 409 LSKNYSAGSDVYSFGVFLLELISGR 433
+YS SD++S G+ L+E+ GR
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 242 INIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
+ +G+G +G ++GL G V +K Q++ E + V RH ++GF
Sbjct: 13 VECVGKGRYGEVWRGLWH-GESVAVKIFSSRDEQSWFRETEIYNTVLLRH-DNILGFIAS 70
Query: 302 NH-------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+ Q LI Y +G++ + L P L +R +A+ AA GL HLH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP--HLALR----LAVSAACGLAHLHVE 124
Query: 355 V------PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELN 408
+ P + H F++ NVL++ N ++D GL + H+ + +D +P +
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM-----HSQGSDYLDIGNNPRVG 179
Query: 409 LSKNYSA-----------------GSDVYSFGVFLLEL 429
+K Y A +D+++FG+ L E+
Sbjct: 180 -TKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 290 RHLVKLVGFCEENHQQLLI-YDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
VKL FC ++ ++L Y NG + ++ IG L
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSAL 150
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDP 405
E+LH + H + N+LL E+ +++D+G K+++ S A + V ++ P
Sbjct: 151 EYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISG 432
EL K+ SD+++ G + +L++G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 245 IGEGSFGLAYKGLLQDGS-------LVVIKRHLQTQ---IQNFLHEVKHIARVHHRHLVK 294
+G+GSFG+ +G S + +K + +Q + +F+ EV + + HR+L++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGAAKGLEHLHS 353
L G ++ + + P G++ + L +G +G L+ A+ A+G+ +L S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES 139
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGST--SAVDCFLDPELNL 409
H N+LL K+ D+GL++ + H+ + PE
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ +S SD + FGV L E+ +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 105/245 (42%), Gaps = 21/245 (8%)
Query: 243 NIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNF------LHEVKHIARVHHRHLVKL 295
+ +G G+FG G + G V +K + +I++ E++++ H H++KL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
++ +Y+ G + +++ + G+L ++ + G+++ H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSA 415
+ H + NVLL+ + AK++D+GL +++ + + PE+ + Y+
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 416 GS-DVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
D++S GV L L+ G +H + K+ CD Y + L +
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDHVPT------LFKKICDGIFYTPQYLNPSVISLLK 248
Query: 475 EMMEL 479
M+++
Sbjct: 249 HMLQV 253
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 245 IGEGSFGLAYKGLLQDGS-------LVVIKRHLQTQ---IQNFLHEVKHIARVHHRHLVK 294
+G+GSFG+ +G S + +K + +Q + +F+ EV + + HR+L++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGAAKGLEHLHS 353
L G ++ + + P G++ + L +G +G L+ A+ A+G+ +L S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES 129
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGST--SAVDCFLDPELNL 409
H N+LL K+ D+GL++ + H+ + PE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ +S SD + FGV L E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 29/274 (10%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQTQI-----QNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ ++ V + + + FL E + + H H+VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G EN +I + G +++ L + L + + A + L +L S
Sbjct: 78 GVITEN-PVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLES--K 130
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNYS 414
H NVL+ K+ D+GL + + S ++ S + ++ PE + ++
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAAT 474
+ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 191 SASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCPP 239
Query: 475 EMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 245 IGEGSFGLAYKGLLQDGS-------LVVIKRHLQTQ---IQNFLHEVKHIARVHHRHLVK 294
+G+GSFG+ +G S + +K + +Q + +F+ EV + + HR+L++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGAAKGLEHLHS 353
L G ++ + + P G++ + L +G +G L+ A+ A+G+ +L S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES 129
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGST--SAVDCFLDPELNL 409
H N+LL K+ D+GL++ + H+ + PE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ +S SD + FGV L E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 35/232 (15%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQN--------FLHEVKHIA 285
AT+ + + IG G++G YK G V +K ++ N + EV +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALLR 58
Query: 286 RVH---HRHLVKLVGFCEENH-----QQLLIYDYIPNGNVQNHLYDSE--GLPIGKLT-- 333
R+ H ++V+L+ C + + L+++++ + +++ +L + GLP +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 117
Query: 334 MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA 393
MRQ L +GL+ LH+ + H + N+L+ T K++D+GL ++ +
Sbjct: 118 MRQFL-------RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 168
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
+ PE+ L Y+ D++S G E+ + N S +DQ
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQ 219
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 30/257 (11%)
Query: 182 MCVKRRIRRSEGESSVPSPSAELERGDISPYPGAVSPIDTQNLKQLTILELKHATNNFSE 241
M VK + R S +P+P A + ++ GAV+ T S+
Sbjct: 52 MPVKSK-RTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYT-----------------VSK 93
Query: 242 INIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH----IARVHHRHLVKLVG 297
I+G G FG +K L + + ++T+ EVK+ + ++ H +L++L
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 298 FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPP 357
E + +L+ +Y+ G + + + D LT + +G+ H+H +
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESY----NLTELDTILFMKQICEGIRHMHQMY-- 207
Query: 358 LFHMHFRTSNVLL--EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSA 415
+ H+ + N+L + K+ D+GL + FL PE+ S
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSF 267
Query: 416 GSDVYSFGVFLLELISG 432
+D++S GV L+SG
Sbjct: 268 PTDMWSVGVIAYMLLSG 284
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 26/224 (11%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQN------FLHEVKHIAR--VHH 289
+F + +IG GS+ L+ + R ++ ++ N ++ KH+ +H
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTM-RQRLSIALGAAKGL 348
LV L + + + +Y+ G++ H+ LP +S+AL
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 167
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
+LH + + + NVLL+ K++DYG+ K G T++ C ++
Sbjct: 168 -YLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYIA 221
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHG--RNHSNSDQN 446
PE+ ++Y D ++ GV + E+++GR + N DQN
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 245 IGEGSFGLAYKGLLQDGS-------LVVIKRHLQTQ---IQNFLHEVKHIARVHHRHLVK 294
+G+GSFG+ +G S + +K + +Q + +F+ EV + + HR+L++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGAAKGLEHLHS 353
L G ++ + + P G++ + L +G +G L+ A+ A+G+ +L S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES 133
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLV--TGSHHAGST--SAVDCFLDPELNL 409
H N+LL K+ D+GL++ + H+ + PE
Sbjct: 134 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ +S SD + FGV L E+ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 119
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 147
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + S V ++ PE
Sbjct: 148 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 119
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 119
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 245 IGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQN------FLHEVKHIARVHHRHLVKLVG 297
+G+G FG Y Q ++ +K +TQ++ EV+ + + H ++++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 298 FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPP 357
+ + + LI +Y P G V L + + ++ + A L + HS
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTATYITELANALSYCHS--KR 132
Query: 358 LFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGS 417
+ H + N+LL N K++D+G S +D +L PE+ + +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLD-YLPPEMIEGRMHDEKV 191
Query: 418 DVYSFGVFLLELISGR---EAH 436
D++S GV E + G EAH
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAH 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 119
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 62
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 117
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 118 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 245 IGEGSFGLAYKGLLQDGS-------LVVIKRHLQTQ---IQNFLHEVKHIARVHHRHLVK 294
+G+GSFG+ +G S + +K + +Q + +F+ EV + + HR+L++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGAAKGLEHLHS 353
L G ++ + + P G++ + L +G +G L+ A+ A+G+ +L S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES 139
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHA---GSTSAVDCFLDPELNL 409
H N+LL K+ D+GL++ L H + PE
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ +S SD + FGV L E+ +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 231 ELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHIA 285
ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E++ +
Sbjct: 21 ELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 78
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIAL 342
+ ++V G + + + +++ G++ L + +P +GK +++
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK--------VSI 130
Query: 343 GAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCF 402
KGL +L + H + SN+L+ K+ D+G+ + S A S +
Sbjct: 131 AVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSY 188
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE +YS SD++S G+ L+E+ GR
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV 399
IA+ K LEHLHS + + H + SNVL+ K+ D+G+ + S +
Sbjct: 158 IAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 400 DCFL-----DPELNLSKNYSAGSDVYSFGVFLLEL 429
++ +PELN K YS SD++S G+ ++EL
Sbjct: 217 KPYMAPERINPELN-QKGYSVKSDIWSLGITMIEL 250
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 238 NFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHHRH 291
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHEN 65
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VK G E + Q L +Y G + + + G+P QR L A G+ +L
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVVYL 120
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPELN 408
H + + H + N+LL+E K+SD+GL + ++ ++ PEL
Sbjct: 121 HGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 409 LSKNYSAGS-DVYSFGVFLLELISG 432
+ + A DV+S G+ L +++G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 238 NFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHHRH 291
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHEN 66
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+VK G E + Q L +Y G + + + G+P QR L A G+ +L
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVVYL 121
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPELN 408
H + + H + N+LL+E K+SD+GL + ++ ++ PEL
Sbjct: 122 HGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 409 LSKNYSAGS-DVYSFGVFLLELISG 432
+ + A DV+S G+ L +++G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 220 DTQNLKQL-TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR-HLQTQIQN 276
D + L++L +I+ + ++ IG+G+ G Y + + G V I++ +LQ Q +
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 277 --FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS---EGLPIGK 331
++E+ + + ++V + + ++ +Y+ G++ + + ++ EG
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----- 116
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
Q ++ + LE LHS + H ++ N+LL + + K++D+G +T
Sbjct: 117 ----QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 392 HAGSTSA-VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
S ++ PE+ K Y D++S G+ +E+I G
Sbjct: 171 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 35/232 (15%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQN--------FLHEVKHIA 285
AT+ + + IG G++G YK G V +K ++ N + EV +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALLR 58
Query: 286 RVH---HRHLVKLVGFCEENH-----QQLLIYDYIPNGNVQNHLYDSE--GLPIGKLT-- 333
R+ H ++V+L+ C + + L+++++ + +++ +L + GLP +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 117
Query: 334 MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA 393
MRQ L +GL+ LH+ + H + N+L+ T K++D+GL ++ +
Sbjct: 118 MRQFL-------RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 168
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
+ PE+ L Y+ D++S G E+ + N S +DQ
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQ 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNF-----------LHEVK 282
AT+ + + IG G++G YK G V +K ++ N + EV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGGGGGGGLPISTVREVA 63
Query: 283 HIARVH---HRHLVKLVGFCEENH-----QQLLIYDYIPNGNVQNHLYDSE--GLPIGKL 332
+ R+ H ++V+L+ C + + L+++++ + +++ +L + GLP +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 333 T--MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS 390
MRQ L +GL+ LH+ + H + N+L+ T K++D+GL ++ +
Sbjct: 123 KDLMRQFL-------RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 173
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
+ PE+ L Y+ D++S G E+ + N S +DQ
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQ 227
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 220 DTQNLKQL-TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR-HLQTQIQN 276
D + L++L +I+ + ++ IG+G+ G Y + + G V I++ +LQ Q +
Sbjct: 3 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 62
Query: 277 --FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS---EGLPIGK 331
++E+ + + ++V + + ++ +Y+ G++ + + ++ EG
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----- 117
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
Q ++ + LE LHS + H ++ N+LL + + K++D+G +T
Sbjct: 118 ----QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 392 HAGSTSA-VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
S ++ PE+ K Y D++S G+ +E+I G
Sbjct: 172 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 220 DTQNLKQL-TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR-HLQTQIQN 276
D + L++L +I+ + ++ IG+G+ G Y + + G V I++ +LQ Q +
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 277 --FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS---EGLPIGK 331
++E+ + + ++V + + ++ +Y+ G++ + + ++ EG
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----- 116
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
Q ++ + LE LHS + H ++ N+LL + + K++D+G +T
Sbjct: 117 ----QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 392 HAGS-TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
S ++ PE+ K Y D++S G+ +E+I G
Sbjct: 171 SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 245 IGEGSFGLAYKGLLQDGS-------LVVIKRHLQTQ---IQNFLHEVKHIARVHHRHLVK 294
+G+GSFG+ +G S + +K + +Q + +F+ EV + + HR+L++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 295 LVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGAAKGLEHLHS 353
L G ++ + + P G++ + L +G +G L+ A+ A+G+ +L S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLES 129
Query: 354 LVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHA---GSTSAVDCFLDPELNL 409
H N+LL K+ D+GL++ L H + PE
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 410 SKNYSAGSDVYSFGVFLLELIS 431
++ +S SD + FGV L E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 119
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 233 KHATNNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIA 285
K +F I+GEGSF LA + + I KRH+ + ++ E ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
R+ H VKL +++ + Y NG + ++ IG
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIV 119
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--F 402
LE+LH + H + N+LL E+ +++D+G K+++ S A + V +
Sbjct: 120 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ PEL K+ SD+++ G + +L++G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 233 KHATNNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIA 285
K +F I+GEGSF LA + + I KRH+ + ++ E ++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
R+ H VKL +++ + Y NG + ++ IG
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIV 120
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--F 402
LE+LH + H + N+LL E+ +++D+G K+++ S A + V +
Sbjct: 121 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ PEL K+ SD+++ G + +L++G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 238 NFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHLQTQIQN--FLHEVKHIAR--VHH 289
+F + +IG GS+ + K + ++ V+K+ L ++ ++ KH+ +H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTM-RQRLSIALGAAKGL 348
LV L + + + +Y+ G++ H+ LP +S+AL
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 135
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
+LH + + + NVLL+ K++DYG+ K G T++ C ++
Sbjct: 136 -YLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHG--RNHSNSDQN 446
PE+ ++Y D ++ GV + E+++GR + N DQN
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 233
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 245 IGEGSFGLAYKGLLQ------DGSLVVIKRHLQ-TQIQNFLHEVKHIARVHHRHLVKLVG 297
+G G+FG +G+ + D ++ V+K+ + + + E + + ++ + ++V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 298 FCEENHQQLLIYDYIPNGNVQNHLY-DSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
C+ +L+ + G + L E +P+ + + + G+++L
Sbjct: 78 VCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYLEE--K 129
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLK-LVTGSHHAGSTSAVDC---FLDPELNLSKN 412
H NVLL + AK+SD+GL K L + + SA + PE +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 413 YSAGSDVYSFGVFLLELIS-GREAHGRNHSNSDQNLILQVKR 453
+S+ SDV+S+GV + E +S G++ + + I Q KR
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR 231
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 245 IGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQN------FLHEVKHIARVHHRHLVKLVG 297
+G+G FG Y Q ++ +K +TQ++ EV+ + + H ++++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 298 FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPP 357
+ + + LI +Y P G V L + + ++ + A L + HS
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTATYITELANALSYCHS--KR 132
Query: 358 LFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGS 417
+ H + N+LL N K++D+G S +D +L PE+ + +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLD-YLPPEMIEGRMHDEKV 191
Query: 418 DVYSFGVFLLELISGR---EAH 436
D++S GV E + G EAH
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAH 213
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 233 KHATNNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIA 285
K +F I+GEGSF LA + + I KRH+ + ++ E ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
R+ H VKL +++ + Y NG + ++ IG
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIV 118
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--F 402
LE+LH + H + N+LL E+ +++D+G K+++ S A + V +
Sbjct: 119 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ PEL K+ SD+++ G + +L++G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 233 KHATNNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIA 285
K +F I+GEGSF LA + + I KRH+ + ++ E ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
R+ H VKL +++ + Y NG + ++ IG
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIV 117
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--F 402
LE+LH + H + N+LL E+ +++D+G K+++ S A + V +
Sbjct: 118 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ PEL K+ SD+++ G + +L++G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMA--GVV 119
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
LT+ + + AKG+E L S H N+LL E K+ D+GL + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 252
Query: 392 ---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G ++ PE + Y+ SDV+SFGV L E+ S
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 144
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + + V ++ PE
Sbjct: 145 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
LT+ + + AKG+E L S H N+LL E K+ D+GL + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 254
Query: 392 ---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G ++ PE + Y+ SDV+SFGV L E+ S
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 237 NNFSEINIIGEGSFGLAY----KGLLQDGSLVVIKRHLQTQ---IQNFLHEVKHIARVHH 289
+F+ + ++G+GSFG KG + ++ ++K+ + Q ++ + E + +A +
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 290 RHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
+ + C + +L + +Y+ G++ H+ +GK Q + A + GL
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-----VGKFKEPQAVFYAAEISIGL 133
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKL-----VTGSHHAGSTSAVDCFL 403
LH + + + NV+L+ K++D+G+ K VT G+ ++
Sbjct: 134 FFLHKR--GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD----YI 187
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGR 433
PE+ + Y D +++GV L E+++G+
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 44/227 (19%)
Query: 233 KHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHL 292
+ + + + +G+G +G ++G Q G V +K +++ E + V RH
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRH- 61
Query: 293 VKLVGFCEENH-------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
++GF + Q LI Y G+ LYD L + L L I L A
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGS----LYDY--LQLTTLDTVSCLRIVLSIA 115
Query: 346 KGLEHLHSLV------PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV 399
GL HLH + P + H ++ N+L+++N ++D GL + H+ ST+ +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HSQSTNQL 170
Query: 400 DCFLDPELNLSKNYSAGS-----------------DVYSFGVFLLEL 429
D +P + +K Y A D+++FG+ L E+
Sbjct: 171 DVGNNPRVG-TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG++G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 143
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT-GSHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + S V ++ PE
Sbjct: 144 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 238 NFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHLQTQIQN--FLHEVKHIAR--VHH 289
+F + +IG GS+ + K + ++ V+K+ L ++ ++ KH+ +H
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ-RLSIALGAAKGL 348
LV L + + + +Y+ G++ H+ LP +S+AL
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 124
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
+LH + + + NVLL+ K++DYG+ K G T++ C ++
Sbjct: 125 -YLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIA 178
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHG--RNHSNSDQN 446
PE+ ++Y D ++ GV + E+++GR + N DQN
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 222
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 44/233 (18%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIAR 286
L L + + + +G+G +G ++G Q G V +K +++ E +
Sbjct: 27 LPFLVQRTVARQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNT 85
Query: 287 VHHRHLVKLVGFCEENH-------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
V RH ++GF + Q LI Y G+ LYD L + L L
Sbjct: 86 VMLRH-ENILGFIASDMTSRHSSTQLWLITHYHEMGS----LYDY--LQLTTLDTVSCLR 138
Query: 340 IALGAAKGLEHLHSLV------PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA 393
I L A GL HLH + P + H ++ N+L+++N ++D GL + H+
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HS 193
Query: 394 GSTSAVDCFLDPELNLSKNYSAGS-----------------DVYSFGVFLLEL 429
ST+ +D +P + +K Y A D+++FG+ L E+
Sbjct: 194 QSTNQLDVGNNPRVG-TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 77
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 78 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYR 192
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E+I G G +H + +I Q+ C
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
LT+ + + AKG+E L S H N+LL E K+ D+GL + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247
Query: 392 ---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G ++ PE + Y+ SDV+SFGV L E+ S
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
LT+ + + AKG+E L S H N+LL E K+ D+GL + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 245
Query: 392 ---HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELIS 431
G ++ PE + Y+ SDV+SFGV L E+ S
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 238 NFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHLQTQIQN--FLHEVKHIAR--VHH 289
+F + +IG GS+ + K + ++ V+K+ L ++ ++ KH+ +H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ-RLSIALGAAKGL 348
LV L + + + +Y+ G++ H+ LP +S+AL
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 120
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
+LH + + + NVLL+ K++DYG+ K G T++ C ++
Sbjct: 121 -YLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIA 174
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHG--RNHSNSDQN 446
PE+ ++Y D ++ GV + E+++GR + N DQN
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 218
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHIARVHHRH 291
++F I+ +G G+ G+ K + L++ ++ + +I+ + E++ + + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRLSIALGAAKGL 348
+V G + + + +++ G++ L +++ +P +GK +++ +GL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK--------VSIAVLRGL 127
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELN 408
+L + H + SN+L+ K+ D+G+ + S A S ++ PE
Sbjct: 128 AYLRE-KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMAPERL 185
Query: 409 LSKNYSAGSDVYSFGVFLLELISGR 433
+YS SD++S G+ L+EL GR
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
+ L Y D++S GV + E+I G
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
+ L Y D++S GV + E+I G
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 44/215 (20%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENH- 303
+G+G +G ++G Q G V +K +++ E + V RH ++GF +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRH-ENILGFIASDMT 73
Query: 304 ------QQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV-- 355
Q LI Y G+ LYD L + L L I L A GL HLH +
Sbjct: 74 SRHSSTQLWLITHYHEMGS----LYDY--LQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 356 ----PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSK 411
P + H ++ N+L+++N ++D GL + H+ ST+ +D +P + +K
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HSQSTNQLDVGNNPRVG-TK 181
Query: 412 NYSAGS-----------------DVYSFGVFLLEL 429
Y A D+++FG+ L E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 78
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 79 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 136 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E+I G G +H + +I Q+ C
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 246
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 146
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 147 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + + + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREA-HGRNHSNSDQNLILQV 451
+ L Y+A D++S G + EL+ G G +H + +I Q+
Sbjct: 196 VILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQL 241
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 114/275 (41%), Gaps = 31/275 (11%)
Query: 245 IGEGSFGLAYKGLL---QDGSLVVIKRHLQ-----TQIQNFLHEVKHIARVHHRHLVKLV 296
IGEG FG ++G+ ++ ++ V + + + + FL E + + H H+VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSE-GLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
G EN +I + G +++ L + L + L + A + L +L S
Sbjct: 458 GVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLIL-----YAYQLSTALAYLES-- 509
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDC-FLDPELNLSKNY 413
H NVL+ K+ D+GL + + S ++ S + ++ PE + +
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 414 SAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVDKTLGEQTVGAA 473
++ SDV+ FGV + E++ HG VK + +G+ +
Sbjct: 570 TSASDVWMFGVCMWEIL----MHGVKPFQG-------VKNNDVIGRIENGERLPMPPNCP 618
Query: 474 TEMMELALQCVDVS-SRRPSMRQIAGELEGIQERE 507
+ L +C SRRP ++ +L I E E
Sbjct: 619 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 146
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 147 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 146
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 147 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 77
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 78 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E+I G G +H + +I Q+ C
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 144
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 145 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 149
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 150 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 147
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 148 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYG----LLKLVTGSHHAGS 395
IA+ K LEHLHS + + H + SNVL+ K+ D+G L+ V AG
Sbjct: 114 IAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 396 TSAVDC-FLDPELNLSKNYSAGSDVYSFGVFLLEL 429
+ ++PELN K YS SD++S G+ ++EL
Sbjct: 173 KPYMAPERINPELN-QKGYSVKSDIWSLGITMIEL 206
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 146
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 147 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 146
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 147 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 144
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 145 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 144
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG-SHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 145 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 245 IGEGSFGLA-----YKGLLQDGSLVVIKRHLQTQIQNFLH---EVKHIARVHHRHLVKLV 296
+GEGSFG YK Q +L I R L + + E+ ++ + H H++KL
Sbjct: 17 LGEGSFGKVKLATHYKTQ-QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLY 75
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
+++ +Y G + +++ + + + + +R + A H H +V
Sbjct: 76 DVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDE---GRRFFQQIICAIEYCHRHKIV- 130
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAG 416
H + N+LL++N K++D+GL ++T + ++ + PE+ K Y+
Sbjct: 131 ---HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 417 S-DVYSFGVFLLELISGR 433
DV+S G+ L ++ GR
Sbjct: 188 EVDVWSCGIVLYVMLVGR 205
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQ-----TQIQNFLHEV-KHIARVH 288
T F E+ IG G FG +K + + DG + IKR + QN L EV H
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL-SIALGAAKG 347
H H+V+ E+ L+ +Y G++ + + SE I L + L +G
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 125
Query: 348 LEHLHSLVPPLFHMHFRTSNVLL 370
L ++HS+ L HM + SN+ +
Sbjct: 126 LRYIHSM--SLVHMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQ-----TQIQNFLHEV-KHIARVH 288
T F E+ IG G FG +K + + DG + IKR + QN L EV H
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL-SIALGAAKG 347
H H+V+ E+ L+ +Y G++ + + SE I L + L +G
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 125
Query: 348 LEHLHSLVPPLFHMHFRTSNVLL 370
L ++HS+ L HM + SN+ +
Sbjct: 126 LRYIHSM--SLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQ-----TQIQNFLHEV-KHIARVH 288
T F E+ IG G FG +K + + DG + IKR + QN L EV H
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL-SIALGAAKG 347
H H+V+ E+ L+ +Y G++ + + SE I L + L +G
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 127
Query: 348 LEHLHSLVPPLFHMHFRTSNVLL 370
L ++HS+ L HM + SN+ +
Sbjct: 128 LRYIHSM--SLVHMDIKPSNIFI 148
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 27/272 (9%)
Query: 234 HATNNFSEINIIGEGSFGLAY----KGLLQDGSLVVIKRHLQTQIQN--FLHEVKHIARV 287
H + + + +G G++G K + ++ +I++ + N L EV + +
Sbjct: 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL 93
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
H +++KL F E+ L+ + G L+D E + K I G
Sbjct: 94 DHPNIMKLYDFFEDKRNYYLVMECYKGG----ELFD-EIIHRMKFNEVDAAVIIKQVLSG 148
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLD 404
+ +LH + H + N+LLE ++ K+ D+GL + ++
Sbjct: 149 VTYLHK--HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIA 206
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYV-DK 463
PE+ L K Y DV+S GV L L++G G +DQ ++ +V++ GKY D
Sbjct: 207 PEV-LRKKYDEKCDVWSIGVILFILLAGYPPFG---GQTDQEILRKVEK----GKYTFDS 258
Query: 464 TLGEQTVGAATEMMELALQCVDVSSRRPSMRQ 495
+ A ++++ LQ S RR S +Q
Sbjct: 259 PEWKNVSEGAKDLIKQMLQF--DSQRRISAQQ 288
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 210 SPY--PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQ------DG 261
SPY P + P + ++L LE K +G G+FG KG Q
Sbjct: 8 SPYADPEEIRPKEVYLDRKLLTLEDKE----------LGSGNFGTVKKGYYQMKKVVKTV 57
Query: 262 SLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQN 319
++ ++K L E + ++ + ++V+++G CE +L+ + G +
Sbjct: 58 AVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 116
Query: 320 HLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVS 379
+L + + + + + + G+++L H NVLL + AK+S
Sbjct: 117 YLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKIS 169
Query: 380 DYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGRE 434
D+GL K + +++ T V + +N K +S+ SDV+SFGV + E S +
Sbjct: 170 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQ 228
Query: 435 AHGRNHSNSDQNLILQ 450
R S+ +L+
Sbjct: 229 KPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 210 SPY--PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQ------DG 261
SPY P + P + ++L LE K +G G+FG KG Q
Sbjct: 8 SPYADPEEIRPKEVYLDRKLLTLEDKE----------LGSGNFGTVKKGYYQMKKVVKTV 57
Query: 262 SLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQN 319
++ ++K L E + ++ + ++V+++G CE +L+ + G +
Sbjct: 58 AVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 116
Query: 320 HLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVS 379
+L + + + + + + G+++L H NVLL + AK+S
Sbjct: 117 YLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKIS 169
Query: 380 DYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGRE 434
D+GL K + +++ T V + +N K +S+ SDV+SFGV + E S +
Sbjct: 170 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQ 228
Query: 435 AHGRNHSNSDQNLILQ 450
R S+ +L+
Sbjct: 229 KPYRGMKGSEVTAMLE 244
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 27/211 (12%)
Query: 242 INIIGEGSFGLAYKG-LLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
+ + G FG +K LL + V I Q +EV + + H ++++ +G +
Sbjct: 29 LEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 301 E----NHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
+ LI + G++ S+ L ++ + IA A+GL +LH +P
Sbjct: 89 RGTSVDVDLWLITAFHEKGSL------SDFLKANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 357 PL--------FHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS---AVDCFLDP 405
L H ++ NVLL+ N TA ++D+GL AG T ++ P
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 406 E-----LNLSKNYSAGSDVYSFGVFLLELIS 431
E +N ++ D+Y+ G+ L EL S
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 236 TNNFSEINIIGEGSFG---LAYKGLLQDG---SLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++ + +GEG+ G LA + ++ +V +KR + +N E+ ++H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
++VK G E + Q L +Y G + + + G+P QR L A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFHQLMA--GVV 118
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHA---GSTSAVDCFLDPE 406
+LH + + H + N+LL+E K+SD+GL + ++ ++ PE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 407 LNLSKNYSAGS-DVYSFGVFLLELISG 432
L + + A DV+S G+ L +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 79
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 80 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 136
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 137 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYR 194
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E+I G G +H + +I Q+ C
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 232 LKHATNNFSE----INIIGEGSFGLAY----KGLLQDGSLVVI-KRHLQ--TQIQNFLHE 280
++H+T FS+ ++G+GSFG K Q+ ++ VI KR ++ T ++ L E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSI 340
V+ + ++ H +++KL F E+ L+ + G L+D ++ R+R S
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG----ELFD-------EIISRKRFS- 147
Query: 341 ALGAAK-------GLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGS 390
+ AA+ G+ ++H + H + N+LLE ++ ++ D+GL S
Sbjct: 148 EVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
++ PE+ L Y DV+S GV L L+SG
Sbjct: 206 KKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 232 LKHATNNFSE----INIIGEGSFGLAY----KGLLQDGSLVVI-KRHLQ--TQIQNFLHE 280
++H+T FS+ ++G+GSFG K Q+ ++ VI KR ++ T ++ L E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS- 339
V+ + ++ H +++KL F E+ L+ + G L+D ++ R+R S
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFD-------EIISRKRFSE 131
Query: 340 -----IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSH 391
I G+ ++H + H + N+LLE ++ ++ D+GL S
Sbjct: 132 VDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 189
Query: 392 HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
++ PE+ L Y DV+S GV L L+SG
Sbjct: 190 KMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 210 SPY--PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQ------DG 261
SPY P + P + ++L LE K +G G+FG KG Q
Sbjct: 6 SPYADPEEIRPKEVYLDRKLLTLEDKE----------LGSGNFGTVKKGYYQMKKVVKTV 55
Query: 262 SLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQN 319
++ ++K L E + ++ + ++V+++G CE +L+ + G +
Sbjct: 56 AVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 114
Query: 320 HLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVS 379
+L + + + + + + G+++L H NVLL + AK+S
Sbjct: 115 YLQQNR-----HVKDKNIIELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKIS 167
Query: 380 DYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGRE 434
D+GL K + +++ T V + +N K +S+ SDV+SFGV + E S +
Sbjct: 168 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQ 226
Query: 435 AHGRNHSNSDQNLILQ 450
R S+ +L+
Sbjct: 227 KPYRGMKGSEVTAMLE 242
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 232 LKHATNNFSE----INIIGEGSFGLAY----KGLLQDGSLVVI-KRHLQ--TQIQNFLHE 280
++H+T FS+ ++G+GSFG K Q+ ++ VI KR ++ T ++ L E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSI 340
V+ + ++ H +++KL F E+ L+ + G L+D ++ R+R S
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG----ELFD-------EIISRKRFS- 148
Query: 341 ALGAAK-------GLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGS 390
+ AA+ G+ ++H + H + N+LLE ++ ++ D+GL S
Sbjct: 149 EVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
++ PE+ L Y DV+S GV L L+SG
Sbjct: 207 KKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 232 LKHATNNFSE----INIIGEGSFGLAY----KGLLQDGSLVVI-KRHLQ--TQIQNFLHE 280
++H+T FS+ ++G+GSFG K Q+ ++ VI KR ++ T ++ L E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSI 340
V+ + ++ H +++KL F E+ L+ + G L+D ++ R+R S
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG----ELFD-------EIISRKRFS- 124
Query: 341 ALGAAK-------GLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGS 390
+ AA+ G+ ++H + H + N+LLE ++ ++ D+GL S
Sbjct: 125 EVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
++ PE+ L Y DV+S GV L L+SG
Sbjct: 183 KKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQ-----TQIQNFLHEV-KHIARVH 288
T F E+ IG G FG +K + + DG + IKR + QN L EV H
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRL-SIALGAAKG 347
H H+V+ E+ L+ +Y G++ + + SE I L + L +G
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRG 123
Query: 348 LEHLHSLVPPLFHMHFRTSNVLL 370
L ++HS+ L HM + SN+ +
Sbjct: 124 LRYIHSM--SLVHMDIKPSNIFI 144
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 105/228 (46%), Gaps = 17/228 (7%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEVKHIARVHH 289
+++ F ++ +G G++ YKGL + + V + ++ + + E+ + + H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL---PIG-KLTMRQRLSIALGAA 345
++V+L ++ L+++++ N +++ ++ DS + P G +L + + L
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYM-DSRTVGNTPRGLELNLVKYFQWQL--L 118
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-D 404
+GL H + H + N+L+ + K+ D+GL + + S+ V +
Sbjct: 119 QGLAFCHE--NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 405 PELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
P++ + S+ YS D++S G L E+I+G+ + LI +
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDI 224
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 108/246 (43%), Gaps = 27/246 (10%)
Query: 245 IGEGSFG-LAYKGLLQDGSLVVIK----RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFC 299
IG G F + + G +V IK L + + E++ + + H+H+ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLP--IGKLTMRQRLSIALGAAKGLEHLHSLVPP 357
E ++ ++ +Y P G + +++ + L ++ RQ +S + ++HS
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS-------AVAYVHS--QG 128
Query: 358 LFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--HHAGSTSAVDCFLDPELNLSKNY-S 414
H + N+L +E + K+ D+GL G+ +H + + PEL K+Y
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 415 AGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKY-VDKTLGEQTVGAA 473
+ +DV+S G+ L L+ G D + ++ + + GKY V K L ++
Sbjct: 189 SEADVWSMGILLYVLMCGFLPF-------DDDNVMALYKKIMRGKYDVPKWLSPSSILLL 241
Query: 474 TEMMEL 479
+M+++
Sbjct: 242 QQMLQV 247
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQ-----NFLHEV 281
+ + ELK ++F +I+ +G G+ G+ +K + LV+ ++ + +I+ + E+
Sbjct: 1 MALGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLP---IGKLTMRQRL 338
+ + + ++V G + + + +++ G++ L + +P +GK
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK------- 111
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
+++ KGL +L + H + SN+L+ K+ D+G+ + A
Sbjct: 112 -VSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEMANEFVG 168
Query: 399 VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE +YS SD++S G+ L+E+ GR
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 128
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT-GSHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 129 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAV 399
I L K L HL + + H + SN+LL+ + K+ D+G+ + S +
Sbjct: 130 ITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 400 DCFLDPE-LNLS---KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
++ PE ++ S + Y SDV+S G+ L EL +GR + + +S DQ
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQIQNFLH---EVKHIARVHHRHL 292
+ + ++ +G G GL + + D V IK+ + T Q+ H E+K I R+ H ++
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 293 VKL--------------VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPI----GKLTM 334
VK+ VG E + ++ +Y+ ++ N L E P+ +L M
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL---EQGPLLEEHARLFM 126
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE-ENYTAKVSDYGLLKLVTGSH-H 392
Q L +GL+++HS + H + +N+ + E+ K+ D+GL +++ + H
Sbjct: 127 YQLL-------RGLKYIHS--ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
Query: 393 AGSTS---AVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLI 448
G S + P L LS NY+ D+++ G E+++G+ H LI
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 449 LQ 450
L+
Sbjct: 238 LE 239
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 242 INIIGEGSFGLAYKGLLQDGSLVVIKRHLQ-TQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
+ I G FG +K L + + V LQ Q E+ + H +L++ + E
Sbjct: 20 LEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA-AE 78
Query: 301 ENHQQL-----LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
+ L LI + G++ ++L + +T + +A ++GL +LH V
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHEDV 132
Query: 356 P---------PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS---AVDCFL 403
P + H F++ NVLL+ + TA ++D+GL G T ++
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 404 DPE-----LNLSKNYSAGSDVYSFGVFLLELIS 431
PE +N ++ D+Y+ G+ L EL+S
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 232 LKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIK--RHLQTQIQNFLHEVKHIARVH 288
L++A++ F EI ++G+G+FG K D IK RH + ++ L EV +A ++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 289 H-------------RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
H R+ VK + ++ + +Y NG + + L SE L +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRDEYW 119
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK---------- 385
+ L A L ++HS + H + N+ ++E+ K+ D+GL K
Sbjct: 120 RLFRQILEA---LSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 386 -----LVTGSHHAGSTSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLELI 430
L S + S ++ E L+ + +Y+ D+YS G+ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 44/281 (15%)
Query: 236 TNNFSEINIIGEGSFG--LAYKGLLQ--DGSLVVIKRHLQTQIQN---FLHEVKHIARVH 288
++ + + +G G++G L K L + ++ +IK+ T N L EV + ++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IAL 342
H +++KL F E+ L+ + G L+D ++ +RQ+ S I
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGG----ELFD-------EIILRQKFSEVDAAVIMK 128
Query: 343 GAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAV 399
G +LH + H + N+LLE + K+ D+GL
Sbjct: 129 QVLSGTTYLHK--HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 186
Query: 400 DCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGK 459
++ PE+ L K Y DV+S GV L L+ G G +DQ ++ +V++ GK
Sbjct: 187 AYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG---GQTDQEILKRVEK----GK 238
Query: 460 Y-VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGE 499
+ D Q A ++++L L + PS R A E
Sbjct: 239 FSFDPPDWTQVSDEAKQLVKLML------TYEPSKRISAEE 273
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 210 SPY--PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQ------DG 261
SPY P + P + ++L LE K +G G+FG KG Q
Sbjct: 351 SPYADPEEIRPKEVYLDRKLLTLEDKE----------LGSGNFGTVKKGYYQMKKVVKTV 400
Query: 262 SLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQN 319
++ ++K L E + ++ + ++V+++G CE +L+ + G +
Sbjct: 401 AVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 459
Query: 320 HLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVS 379
+L + + + + + + G+++L H NVLL + AK+S
Sbjct: 460 YLQQNR-----HVKDKNIIELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKIS 512
Query: 380 DYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGRE 434
D+GL K + +++ T V + +N K +S+ SDV+SFGV + E S +
Sbjct: 513 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQ 571
Query: 435 AHGRNHSNSDQNLILQ 450
R S+ +L+
Sbjct: 572 KPYRGMKGSEVTAMLE 587
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + + + + PE
Sbjct: 136 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPE 193
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREA-HGRNHSNSDQNLILQV 451
+ L Y D++S G + EL+ G G +H + +I Q+
Sbjct: 194 VILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 239
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKR-----HLQTQIQNFLHEVKHIARVHHR 290
+ + IG G+ G+ AY +L V IK+ QT + E+ + V+H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 291 HLVKLVGF------CEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTM-RQRLSIAL- 342
+++ L+ EE L+ + L D+ + ++ + +R+S L
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVME----------LMDANLXQVIQMELDHERMSYLLY 133
Query: 343 GAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCF 402
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 134 QMLXGIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 237 NNFSEINIIGEGSFG---LAYKGLLQDGSLVVI--KRHL--QTQIQNFLHEVKHIARVHH 289
+F I+GEGSF LA + + I KRH+ + ++ E ++R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLE 349
VKL +++ + Y NG + ++ IG LE
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALE 143
Query: 350 HLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT-GSHHAGSTSAVDC--FLDPE 406
+LH + H + N+LL E+ +++D+G K+++ S A + V ++ PE
Sbjct: 144 YLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
L K+ SD+++ G + +L++G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 237 NNFSEINIIGEGSFGLAYK-GLLQDGSLVVIKRHLQTQIQNFLHEVKHIARV-------H 288
+F ++ +G GS+G +K +DG L +KR + + + + +A V
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSM-SPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H V+L EE L + + ++Q H ++ G + + + L L A L
Sbjct: 116 HPCCVRLEQAWEEGGI-LYLQTELCGPSLQQHC-EAWGASLPEAQVWGYLRDTLLA---L 170
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC-FLDPEL 407
HLHS L H+ + +N+ L K+ D+GLL + G+ AG D ++ PEL
Sbjct: 171 AHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYMAPEL 227
Query: 408 NLSKNYSAGSDVYSFGVFLLELISGRE-AHG 437
L +Y +DV+S G+ +LE+ E HG
Sbjct: 228 -LQGSYGTAADVFSLGLTILEVACNMELPHG 257
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 237 NNFSEINIIGEGSFGLAY----KGLLQDGSLVVIKRHLQTQ---IQNFLHEVKHIARVHH 289
+F+ + ++G+GSFG KG + ++ ++K+ + Q ++ + E + +A
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 290 RHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
+ + C + +L + +Y+ G++ H+ +G+ + A A GL
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGL 455
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
L S + + + NV+L+ K++D+G+ K G T+ C ++
Sbjct: 456 FFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD---GVTTKXFCGTPDYIA 510
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGR 433
PE+ + Y D ++FGV L E+++G+
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 77
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 78 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 229 ILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR--HLQTQIQNFLHEVKHIA 285
+LE + + + ++G+G++G+ Y G L + + IK ++ LHE +
Sbjct: 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALH 73
Query: 286 R-VHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALG 343
+ + H+++V+ +G EN + + +P G++ L G L + T+ L
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL- 132
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLKLVTGSHHAGST-SAVD 400
+GL++LH + H + NVL+ Y+ K+SD+G K + G + T +
Sbjct: 133 --EGLKYLHD--NQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTL 187
Query: 401 CFLDPEL--NLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE+ + Y +D++S G ++E+ +G+
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
+ L Y D++S G + E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 106/222 (47%), Gaps = 23/222 (10%)
Query: 224 LKQLTILELKHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHLQTQIQN--- 276
+K++ L++K ++ + +IG G+FG + +K + ++ ++ + + +
Sbjct: 64 VKKIRGLQMK--AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF 121
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
F E +A + +V+L +++ ++ +Y+P G++ N L + +P K
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVP-EKWAKFY 179
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKL-VTGSHHAG 394
+ L L+ +HS+ L H + N+LL+++ K++D+G +K+ TG H
Sbjct: 180 TAEVVLA----LDAIHSM--GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 395 STSAVDCFLDPELNLSKN----YSAGSDVYSFGVFLLELISG 432
+ ++ PE+ S+ Y D +S GVFL E++ G
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
+ L Y D++S G + E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 77
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 78 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ L Y D++S G + E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 131 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 188
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
+ L Y D++S G + E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IGEGS G+ ++ G LV +K+ Q + + +EV + H ++V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +++ G + + + + ++ Q ++ L + L LH+ + H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG--VIH 270
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFLDPELNLSKNYSAGSDV 419
++ ++LL + K+SD+G V+ ++ PEL Y D+
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 420 YSFGVFLLELISG 432
+S G+ ++E++ G
Sbjct: 331 WSLGIMVIEMVDG 343
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 237 NNFSEINIIGEGSFGLAY----KGLLQDGSLVVIKRHLQTQ---IQNFLHEVKHIARVHH 289
+F+ + ++G+GSFG KG + ++ ++K+ + Q ++ + E + +A
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 290 RHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
+ + C + +L + +Y+ G++ H+ +G+ + A A GL
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGL 134
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
L S + + + NV+L+ K++D+G+ K + G T+ C ++
Sbjct: 135 FFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIA 189
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGR 433
PE+ + Y D ++FGV L E+++G+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISG 432
+ L Y D++S G + E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 131 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 188
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 47/282 (16%)
Query: 245 IGEGSFGLAYKGLLQDGS-----------LVVIKRHLQTQIQNFLHEVKHIARVHHRHLV 293
+G+G+F +KG+ ++ L V+ + + ++F ++++ H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
G C + +L+ +++ G++ +L ++ + + +L +A A + L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC----INILWKLEVAKQLAAAMHFLEE 131
Query: 354 LVPPLFHMHFRTSNVLL---EENYTA-----KVSDYGLLKLVTGS---HHAGSTSAVDCF 402
L H + N+LL E+ T K+SD G+ V +C
Sbjct: 132 NT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+P KN + +D +SFG L E+ SG + + S D LQ Y D
Sbjct: 190 ENP-----KNLNLATDKWSFGTTLWEICSGGD---KPLSALDSQRKLQF--------YED 233
Query: 463 KTLGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + A E+ L C+D RPS R I +L +
Sbjct: 234 R--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 77
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 78 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 137 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 194
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 244
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 210 SPY--PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQ------DG 261
SP+ P + P + ++L LE K +G G+FG KG Q
Sbjct: 350 SPFADPEEIRPKEVYLDRKLLTLEDKE----------LGSGNFGTVKKGYYQMKKVVKTV 399
Query: 262 SLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQN 319
++ ++K L E + ++ + ++V+++G CE +L+ + G +
Sbjct: 400 AVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 458
Query: 320 HLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVS 379
+L + + + + + + G+++L H NVLL + AK+S
Sbjct: 459 YLQQNR-----HVKDKNIIELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQHYAKIS 511
Query: 380 DYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGRE 434
D+GL K + +++ T V + +N K +S+ SDV+SFGV + E S +
Sbjct: 512 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQ 570
Query: 435 AHGRNHSNSDQNLILQ 450
R S+ +L+
Sbjct: 571 KPYRGMKGSEVTAMLE 586
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 232 LKHATNNFSE----INIIGEGSFGLAY----KGLLQDGSLVVI-KRHLQ--TQIQNFLHE 280
++H+T FS+ ++G+GSFG K Q+ ++ VI KR ++ T ++ L E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSI 340
V+ + ++ H ++ KL F E+ L+ + G L+D ++ R+R S
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGG----ELFD-------EIISRKRFS- 124
Query: 341 ALGAAKGLEHLHSLVP-----PLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHH 392
+ AA+ + + S + + H + N+LLE ++ ++ D+GL S
Sbjct: 125 EVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
Query: 393 AGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
++ PE+ L Y DV+S GV L L+SG
Sbjct: 185 XKDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 82
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 83 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 139
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 140 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 197
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 250
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Query: 239 FSEINIIGEGSFGL---AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+ + IG G+ G+ AY +L+ V IK+ L QN H A+ +R LV +
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKK-LSRPFQNQTH-----AKRAYRELVLM 71
Query: 296 VGFCEENHQQL--LIYDYIPNGNVQN--------HLYDSEGLPIGKLTM-RQRLSIALGA 344
NH+ + L+ + P +++ L D+ + ++ + +R+S L
Sbjct: 72 KCV---NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 345 AK-GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G++HLHS + H + SN++++ + T K+ D+GL + S +
Sbjct: 129 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
PE+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYG----LLKLVTGSHHAGS 395
IA+ K LEHLHS + + H + SNVL+ K D+G L+ V AG
Sbjct: 141 IAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 396 TS-AVDCFLDPELNLSKNYSAGSDVYSFGVFLLEL 429
++PELN K YS SD++S G+ +EL
Sbjct: 200 KPYXAPERINPELN-QKGYSVKSDIWSLGITXIEL 233
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 47/282 (16%)
Query: 245 IGEGSFGLAYKGLLQDGS-----------LVVIKRHLQTQIQNFLHEVKHIARVHHRHLV 293
+G+G+F +KG+ ++ L V+ + + ++F ++++ H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 294 KLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHS 353
G C + +L+ +++ G++ +L ++ + + +L +A A + L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC----INILWKLEVAKQLAWAMHFLEE 131
Query: 354 LVPPLFHMHFRTSNVLL---EENYTA-----KVSDYGLLKLVTGS---HHAGSTSAVDCF 402
L H + N+LL E+ T K+SD G+ V +C
Sbjct: 132 NT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGKYVD 462
+P KN + +D +SFG L E+ SG + + S D LQ Y D
Sbjct: 190 ENP-----KNLNLATDKWSFGTTLWEICSGGD---KPLSALDSQRKLQF--------YED 233
Query: 463 KTLGEQTVGAATEMMELALQCVDVS-SRRPSMRQIAGELEGI 503
+ + A E+ L C+D RPS R I +L +
Sbjct: 234 R--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 176 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 22/219 (10%)
Query: 245 IGEGSFGLAYKGLLQ------DGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLV 296
+G G+FG KG Q ++ ++K L E + ++ + ++V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G CE +L+ + G + +L + + + + + + G+++L
Sbjct: 79 GICEA-ESWMLVMEMAELGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEE--S 130
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA-----VDCFLDPELNLSK 411
H NVLL + AK+SD+GL K + + V + +N K
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQ 450
+S+ SDV+SFGV + E S + R S+ +L+
Sbjct: 191 -FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 39/250 (15%)
Query: 242 INIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEE 301
I +I + F KG D + + K H + +E+ + + H +++KL E+
Sbjct: 66 IKVIKKSQFD---KGRYSDDNKNIEKFH-----EEIYNEISLLKSLDHPNIIKLFDVFED 117
Query: 302 NHQQLLIYDYIPNGN-----VQNHLYDS-EGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
L+ ++ G + H +D + I M+Q LS G+ +LH
Sbjct: 118 KKYFYLVTEFYEGGELFEQIINRHKFDECDAANI----MKQILS-------GICYLHK-- 164
Query: 356 PPLFHMHFRTSNVLLEENYT---AKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKN 412
+ H + N+LLE + K+ D+GL + + ++ PE+ L K
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKK 223
Query: 413 YSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGK-YVDKTLGEQTVG 471
Y+ DV+S GV + L+ G G +DQ++I +V++ GK Y D +
Sbjct: 224 YNEKCDVWSCGVIMYILLCGYPPFG---GQNDQDIIKKVEK----GKYYFDFNDWKNISD 276
Query: 472 AATEMMELAL 481
A E+++L L
Sbjct: 277 EAKELIKLML 286
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
G++HLHS + H + SN++++ + T K+ D+GL + S + PE
Sbjct: 176 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
Query: 407 LNLSKNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQVKRSC 455
+ L Y D++S G + E++ + GR++ + +I Q+ C
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 245 IGEGSFGLAYKGLLQ------DGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLV 296
+G G+FG KG Q ++ ++K L E + ++ + ++V+++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G CE +L+ + G + +L + + + + + + G+++L
Sbjct: 85 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--S 136
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSK 411
H NVLL + AK+SD+GL K + +++ T V + +N K
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQ 450
+S+ SDV+SFGV + E S + R S+ +L+
Sbjct: 197 -FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 245 IGEGSFGLAYKGLLQ------DGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLV 296
+G G+FG KG Q ++ ++K L E + ++ + ++V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G CE +L+ + G + +L + + + + + + G+++L
Sbjct: 79 GICEA-ESWMLVMEMAELGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEE--S 130
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSK 411
H NVLL + AK+SD+GL K + +++ T V + +N K
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQ 450
+S+ SDV+SFGV + E S + R S+ +L+
Sbjct: 191 -FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 245 IGEGSFGLAYKGLLQ------DGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLV 296
+G G+FG KG Q ++ ++K L E + ++ + ++V+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G CE +L+ + G + +L + + + + + + G+++L
Sbjct: 73 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--S 124
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSK 411
H NVLL + AK+SD+GL K + +++ T V + +N K
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQ 450
+S+ SDV+SFGV + E S + R S+ +L+
Sbjct: 185 -FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 44/281 (15%)
Query: 236 TNNFSEINIIGEGSFG--LAYKGLLQ--DGSLVVIKRHLQTQIQN---FLHEVKHIARVH 288
++ + + +G G++G L K L + ++ +IK+ T N L EV + ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA--- 345
H +++KL F E+ L+ + G L+D ++ +RQ+ S A
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGG----ELFD-------EIILRQKFSEVDAAVIMK 111
Query: 346 ---KGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAV 399
G +LH + H + N+LLE + K+ D+GL
Sbjct: 112 QVLSGTTYLHK--HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 169
Query: 400 DCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQVKRSCDLGK 459
++ PE+ L K Y DV+S GV L L+ G G +DQ ++ +V++ GK
Sbjct: 170 AYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG---GQTDQEILKRVEK----GK 221
Query: 460 Y-VDKTLGEQTVGAATEMMELALQCVDVSSRRPSMRQIAGE 499
+ D Q A ++++L L + PS R A E
Sbjct: 222 FSFDPPDWTQVSDEAKQLVKLML------TYEPSKRISAEE 256
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 10/171 (5%)
Query: 265 VIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS 324
+ K+ L+ + + +E+ + ++ H ++V L E LI + G + + + +
Sbjct: 51 IAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
Query: 325 EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVL---LEENYTAKVSDY 381
G T R + +++LH L + H + N+L L+E+ +SD+
Sbjct: 111 -----GFYTERDASRLIFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 382 GLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
GL K+ + ++ PE+ K YS D +S GV L+ G
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR--HLQTQIQNFLHEVKHIAR 286
LE + + + ++G+G++G+ Y G L + + IK ++ LHE + +
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 287 -VHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LPIGKLTMRQRLSIALGA 344
+ H+++V+ +G EN + + +P G++ L G L + T+ L
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-- 118
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLKLVTGSHHAGST-SAVDC 401
+GL++LH + H + NVL+ Y+ K+SD+G K + G + T +
Sbjct: 119 -EGLKYLHD--NQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ 174
Query: 402 FLDPEL--NLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE+ + Y +D++S G ++E+ +G+
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 245 IGEGSFGLAYKGLLQ------DGSLVVIKRHLQTQI--QNFLHEVKHIARVHHRHLVKLV 296
+G G+FG KG Q ++ ++K L E + ++ + ++V+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 297 GFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVP 356
G CE +L+ + G + +L + + + + + + G+++L
Sbjct: 75 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--S 126
Query: 357 PLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG--SHHAGSTSA---VDCFLDPELNLSK 411
H NVLL + AK+SD+GL K + +++ T V + +N K
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 412 NYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQ 450
+S+ SDV+SFGV + E S + R S+ +L+
Sbjct: 187 -FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 223 NLKQLTILELKHATNNFSEINIIGEGSFGL--AYKGLLQDGSLVVIKRHLQTQIQNFLHE 280
+ L I + K + F +++++ E S GL K + +D S Q ++ E
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--------QVPMEQIEAE 70
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSE--GLPIGKLTMRQRL 338
++ + + H +++K+ E+ H ++ + G + + ++ G + + + + +
Sbjct: 71 IEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVTGSHHAGS 395
+ A L + HS + H + N+L ++ + K+ D+GL +L H+ +
Sbjct: 131 KQMMNA---LAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ ++ PE+ ++ + D++S GV + L++G
Sbjct: 186 AAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IGEGS G+ ++ G LV +K+ Q + + +EV + H ++V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +++ G + + + + ++ Q ++ L + L LH+ + H
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG--VIH 193
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFLDPELNLSKNYSAGSDV 419
++ ++LL + K+SD+G V+ ++ PEL Y D+
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 253
Query: 420 YSFGVFLLELISGREAH 436
+S G+ ++E++ G +
Sbjct: 254 WSLGIMVIEMVDGEPPY 270
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IGEGS G+ ++ G LV +K+ Q + + +EV + H ++V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +++ G + + + + ++ Q ++ L + L LH+ + H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHA--QGVIH 150
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFLDPELNLSKNYSAGSDV 419
++ ++LL + K+SD+G V+ ++ PEL Y D+
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 420 YSFGVFLLELISG 432
+S G+ ++E++ G
Sbjct: 211 WSLGIMVIEMVDG 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKRHLQ----TQIQNFLHEVKHIARVHHRHLVKL---- 295
+G G FG + + QD G V IK+ Q + + E++ + +++H ++V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 296 --VGFCEENHQQLLIYDYIPNGNVQNHLYDSE---GLPIGKLTMRQRLSIALGAAKGLEH 350
+ N LL +Y G+++ +L E GL G + R LS + L +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI--RTLLS---DISSALRY 137
Query: 351 LHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPEL 407
LH + H + N++L+ + K+ D G K + +L PEL
Sbjct: 138 LHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 195
Query: 408 NLSKNYSAGSDVYSFGVFLLELISG----------REAHGRNHSNSDQNLIL 449
K Y+ D +SFG E I+G + HG+ S++++++
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 247
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 233 KHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQ-----TQIQNFLHEVKHIAR 286
+H + + +G+G++G+ +K + + G +V +K+ T Q E+ +
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE 64
Query: 287 VH-HRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALG 343
+ H ++V L+ ++ + L++DY+ + L+ I + +Q + L
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQL- 118
Query: 344 AAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL------LKLVTGSHHAGSTS 397
K +++LHS L H + SN+LL KV+D+GL ++ VT +
Sbjct: 119 -IKVIKYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 398 AVDCFLD----------------PELNL-SKNYSAGSDVYSFGVFLLELISGR 433
+ F D PE+ L S Y+ G D++S G L E++ G+
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKRHLQ----TQIQNFLHEVKHIARVHHRHLVKL---- 295
+G G FG + + QD G V IK+ Q + + E++ + +++H ++V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 296 --VGFCEENHQQLLIYDYIPNGNVQNHLYDSE---GLPIGKLTMRQRLSIALGAAKGLEH 350
+ N LL +Y G+++ +L E GL G + R LS + L +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI--RTLLS---DISSALRY 136
Query: 351 LHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPEL 407
LH + H + N++L+ + K+ D G K + +L PEL
Sbjct: 137 LHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194
Query: 408 NLSKNYSAGSDVYSFGVFLLELISG----------REAHGRNHSNSDQNLIL 449
K Y+ D +SFG E I+G + HG+ S++++++
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 277 FLHEVKHIARVHHRHLVKL--VGFCEENHQQL--LIYDYIPNGNVQNHLYDSEGLPIGKL 332
F E ++ A ++H +V + G E L ++ +Y+ +G + +EG +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEG----PM 113
Query: 333 TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
T ++ + + A + L H + H + +N+++ KV D+G+ + + S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 393 AGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + +A +L PE + A SDVYS G L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IGEGS G+ ++ G LV +K+ Q + + +EV + H ++V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +++ G + + + + ++ Q ++ L + L LH+ + H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHA--QGVIH 148
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFLDPELNLSKNYSAGSDV 419
++ ++LL + K+SD+G V+ ++ PEL Y D+
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 208
Query: 420 YSFGVFLLELISG 432
+S G+ ++E++ G
Sbjct: 209 WSLGIMVIEMVDG 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQ----LLIYDYIPNGNVQNHLYDSEGLPIGKL 332
F E ++ A ++H +V + E ++ +Y+ +G + +EG +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEG----PM 113
Query: 333 TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
T ++ + + A + L H + H + +N+++ KV D+G+ + + S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 393 AGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + +A +L PE + A SDVYS G L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 235 ATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKR----HLQTQIQ-NFLHEVKHIARVH 288
+ + + I +GEG++G YK + V IKR H + + + EV + +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
HR++++L NH+ LI++Y N +++ ++ + ++MR S G+
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP-----DVSMRVIKSFLYQLINGV 145
Query: 349 EHLHSLVPPLFHMHFRTSNVLL-----EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
HS H + N+LL E K+ D+GL + + + +
Sbjct: 146 NFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
Query: 404 -DPELNL-SKNYSAGSDVYSFGVFLLELI 430
PE+ L S++YS D++S E++
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 13/193 (6%)
Query: 265 VIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDS 324
+ K L+ + + +E+ + ++ H ++V L E LI + G + + + +
Sbjct: 51 IAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
Query: 325 EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVL---LEENYTAKVSDY 381
G T R + +++LH L + H + N+L L+E+ +SD+
Sbjct: 111 -----GFYTERDASRLIFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 382 GLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHS 441
GL K+ + ++ PE+ K YS D +S GV L+ G + +
Sbjct: 164 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG---YPPFYD 220
Query: 442 NSDQNLILQVKRS 454
+D L Q+ ++
Sbjct: 221 ENDAKLFEQILKA 233
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 277 FLHEVKHIARVHHRHLVKL--VGFCEENHQQL--LIYDYIPNGNVQNHLYDSEGLPIGKL 332
F E ++ A ++H +V + G E L ++ +Y+ +G + +EG +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEG----PM 113
Query: 333 TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
T ++ + + A + L H + H + +N+++ KV D+G+ + + S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 393 AGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + +A +L PE + A SDVYS G L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 277 FLHEVKHIARVHHRHLVKL--VGFCEENHQQL--LIYDYIPNGNVQNHLYDSEGLPIGKL 332
F E ++ A ++H +V + G E L ++ +Y+ +G + +EG +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEG----PM 113
Query: 333 TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS-H 391
T ++ + + A + L H + H + +N+L+ KV D+G+ + + S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQN--GIIHRDVKPANILISATNAVKVVDFGIARAIADSGN 171
Query: 392 HAGSTSAV---DCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
T+AV +L PE + A SDVYS G L E+++G
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IGEGS G+ ++ G LV +K+ Q + + +EV + H ++V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +++ G + + + + ++ Q ++ L + L LH+ + H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHA--QGVIH 139
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFLDPELNLSKNYSAGSDV 419
++ ++LL + K+SD+G V+ ++ PEL Y D+
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 420 YSFGVFLLELISG 432
+S G+ ++E++ G
Sbjct: 200 WSLGIMVIEMVDG 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 277 FLHEVKHIARVHHRHLVKL--VGFCEENHQQL--LIYDYIPNGNVQNHLYDSEGLPIGKL 332
F E ++ A ++H +V + G E L ++ +Y+ +G + +EG +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEG----PM 113
Query: 333 TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
T ++ + + A + L H + H + +N+++ KV D+G+ + + S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 393 AGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + +A +L PE + A SDVYS G L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 232 LKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIK--RHLQTQIQNFLHEVKHIARVH 288
L++A++ F EI ++G+G+FG K D IK RH + ++ L EV +A ++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 289 H-------------RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
H R+ VK + ++ + +Y N + + L SE L +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQRDEYW 119
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK---------- 385
+ L A L ++HS + H + N+ ++E+ K+ D+GL K
Sbjct: 120 RLFRQILEA---LSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 386 -----LVTGSHHAGSTSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLELI 430
L S + S ++ E L+ + +Y+ D+YS G+ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 245 IGEGSFGLAYKGLLQD-GSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IGEGS G+ ++ G LV +K+ Q + + +EV + H ++V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +++ G + + + + ++ Q ++ L + L LH+ + H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHA--QGVIH 143
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFLDPELNLSKNYSAGSDV 419
++ ++LL + K+SD+G V+ ++ PEL Y D+
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 420 YSFGVFLLELISG 432
+S G+ ++E++ G
Sbjct: 204 WSLGIMVIEMVDG 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 233 KHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIA 285
K N+F + ++G+G+FG + K + ++ ++++ + + ++ + + E + +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 286 RVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
H L L + + H +L + +Y G + HL T +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYGAEI 114
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--- 401
LE+LHS + + + N++L+++ K++D+GL K G+T C
Sbjct: 115 VSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTP 169
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+L PE+ +Y D + GV + E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 229 ILELKHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHLQTQIQN---FLHEV 281
I +L+ ++ + +IG G+FG + +K + ++ ++ + + + F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+A + +V+L +++ ++ +Y+P G++ N + + + + +A
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 180
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
L A + +H V P N+LL+++ K++D+G + +AV
Sbjct: 181 LDAIHSMGFIHRDVKP--------DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 402 --FLDPELNLSKN----YSAGSDVYSFGVFLLELISG 432
++ PE+ S+ Y D +S GVFL E++ G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 229 ILELKHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHLQTQIQN---FLHEV 281
I +L+ ++ + +IG G+FG + +K + ++ ++ + + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+A + +V+L +++ ++ +Y+P G++ N + + + + +A
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
L A + +H V P N+LL+++ K++D+G + +AV
Sbjct: 186 LDAIHSMGFIHRDVKP--------DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 402 --FLDPELNLSKN----YSAGSDVYSFGVFLLELISG 432
++ PE+ S+ Y D +S GVFL E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 19/200 (9%)
Query: 243 NIIGEGSFG---LAYKGLLQDGSLVVIK----RHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+++G G+F LA Q LV IK L+ + + +E+ + ++ H ++V L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQ--KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
E LI + G + + + + G T R + +++LH L
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLHDL- 135
Query: 356 PPLFHMHFRTSNVL---LEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKN 412
+ H + N+L L+E+ +SD+GL K+ + ++ PE+ K
Sbjct: 136 -GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 413 YSAGSDVYSFGVFLLELISG 432
YS D +S GV L+ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 330 GKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTG 389
G +T ++ + + A + L H + H + +N+++ KV D+G+ + +
Sbjct: 128 GPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 390 SHHAGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
S ++ + +A +L PE + A SDVYS G L E+++G
Sbjct: 186 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 233 KHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIA 285
K N+F + ++G+G+FG + K + ++ ++++ + + ++ + + E + +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 286 RVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
H L L + + H +L + +Y G + HL T +
Sbjct: 64 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYGAEI 117
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--- 401
LE+LHS + + + N++L+++ K++D+GL K G+T C
Sbjct: 118 VSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTP 172
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+L PE+ +Y D + GV + E++ GR
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRHLVKLVGFC 299
IGEG++G+ YK G +K+ L+ + + + E+ + + H ++VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLF 359
+ +L+++++ + +++ L EG + +T + S L G+ + H +
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAK---SFLLQLLNGIAYCHD--RRVL 122
Query: 360 HMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELNL-SKNYSAGS 417
H + N+L+ K++D+GL + + V + P++ + SK YS
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 418 DVYSFGVFLLELISG 432
D++S G E+++G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 229 ILELKHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHLQTQIQN---FLHEV 281
I +L+ ++ + +IG G+FG + +K + ++ ++ + + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+A + +V+L +++ ++ +Y+P G++ N + + + + +A
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
L A + +H V P N+LL+++ K++D+G + +AV
Sbjct: 186 LDAIHSMGFIHRDVKP--------DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 402 --FLDPELNLSKN----YSAGSDVYSFGVFLLELISG 432
++ PE+ S+ Y D +S GVFL E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRHLVKLVGFC 299
IGEG++G+ YK G +K+ L+ + + + E+ + + H ++VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLF 359
+ +L+++++ + +++ L EG + +T + S L G+ + H +
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAK---SFLLQLLNGIAYCHD--RRVL 122
Query: 360 HMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELNL-SKNYSAGS 417
H + N+L+ K++D+GL + + V + P++ + SK YS
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 418 DVYSFGVFLLELISG 432
D++S G E+++G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 26/232 (11%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHI--------ARVH 288
++F + +IG+GSFG + + + LQ + E KHI V
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
H LV L + + + DYI G + HL L R R A A L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF----LEPRARF-YAAEIASAL 152
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
+LHSL + + + N+LL+ ++D+GL K H +TS C +L
Sbjct: 153 GYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTF-CGTPEYLA 207
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGREA-HGRNHSNSDQNLI---LQVK 452
PE+ + Y D + G L E++ G + RN + N++ LQ+K
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-----HLQTQIQNFLHEVKHIARVHHR 290
+ + I IG G++G+ + G V IK+ + T + L E+K + H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 291 HLVKLVGFCE------ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
+++ + E ++ D + ++ ++ S+ LT+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-----PLTLEHVRYFLYQL 168
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS---HHAGSTS--AV 399
+GL+++HS + H + SN+L+ EN K+ D+G+ + + S H T A
Sbjct: 169 LRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 400 DCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQV 451
+ PEL LS Y+ D++S G E+++ R+ G+N+ + Q LI+ V
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQ-LIMMV 279
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 19/200 (9%)
Query: 243 NIIGEGSFG---LAYKGLLQDGSLVVIK----RHLQTQIQNFLHEVKHIARVHHRHLVKL 295
+++G G+F LA Q LV IK L+ + + +E+ + ++ H ++V L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQ--KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
E LI + G + + + + G T R + +++LH L
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLHDL- 135
Query: 356 PPLFHMHFRTSNVL---LEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKN 412
+ H + N+L L+E+ +SD+GL K+ + ++ PE+ K
Sbjct: 136 -GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 413 YSAGSDVYSFGVFLLELISG 432
YS D +S GV L+ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 230 LELKHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVK 282
++ K N+F + ++G+G+FG + K + ++ ++++ + + ++ + + E +
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 283 HIARVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIA 341
+ H L L + + H +L + +Y G + HL T +
Sbjct: 63 VLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYG 116
Query: 342 LGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC 401
LE+LHS + + + N++L+++ K++D+GL K G+T C
Sbjct: 117 AEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFC 171
Query: 402 ----FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+L PE+ +Y D + GV + E++ GR
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 233 KHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIA 285
K N+F + ++G+G+FG + K + ++ ++++ + + ++ + + E + +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 286 RVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
H L L + + H +L + +Y G + HL T +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYGAEI 114
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--- 401
LE+LHS + + + N++L+++ K++D+GL K G+T C
Sbjct: 115 VSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTP 169
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+L PE+ +Y D + GV + E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 243 NIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNF------LHEVKHIARVHHRHLVKL 295
+ +G G+FG G Q G V +K + +I++ E++++ H H++KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
++ +Y+ G + + Y + + ++ R RL + +A H H +V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFD--YICKHGRVEEMEAR-RLFQQILSAVDYCHRHMVV 133
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSA 415
H + NVLL+ + AK++D+GL +++ ++ + PE+ + Y+
Sbjct: 134 ----HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 416 GS-DVYSFGVFLLELISG 432
D++S GV L L+ G
Sbjct: 190 PEVDIWSCGVILYALLCG 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ DYGL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDYGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 23/208 (11%)
Query: 238 NFSEINIIGEGSFGLAYKG-LLQDGSLVVIKRHLQTQIQNFL---------HEVKHIARV 287
NF IG G F Y+ L DG V +K+ QI + + E+ + ++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKK---VQIFDLMDAKARADCIKEIDLLKQL 89
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQ---NHLYDSEGLPIGKLTMRQRLSIALGA 344
+H +++K E+++ ++ + G++ H + L + R +
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL----IPERTVWKYFVQL 145
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAG-STSAVDCFL 403
LEH+HS + H + +NV + K+ D GL + + A S ++
Sbjct: 146 CSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 203
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELIS 431
PE Y+ SD++S G L E+ +
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 283 HIAR--VHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSI 340
HI R H H++ L+ E + L++D + G + ++L +E + + + R +
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRS 208
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL---------LKLVTGSH 391
L A L H +++V H + N+LL++N ++SD+G L+ + G+
Sbjct: 209 LLEAVSFL-HANNIV----HRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTP 263
Query: 392 HAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + C +D Y D+++ GV L L++G
Sbjct: 264 GYLAPEILKCSMD---ETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 233 KHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIA 285
K N+F + ++G+G+FG + K + ++ ++++ + + ++ + + E + +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 286 RVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
H L L + + H +L + +Y G + HL T +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYGAEI 114
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--- 401
LE+LHS + + + N++L+++ K++D+GL K G+T C
Sbjct: 115 VSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTP 169
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+L PE+ +Y D + GV + E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQN------FLHEVKHIARVHHRHL 292
+ ++ IGEG++G +K ++ +V + ++ + L E+ + + H+++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLH 352
V+L + + L++++ + +++ + +DS G L S KGL H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCN---GDLDPEIVKSFLFQLLKGLGFCH 118
Query: 353 SLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNL--S 410
S + H + N+L+ N K++D+GL + S V + P L +
Sbjct: 119 SRN--VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 411 KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ 445
K YS D++S G EL + + DQ
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 217 SPIDTQNLKQL--TILELKH--ATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKR 268
SP D +++ ++ + KH N F + ++G+G+FG + K + ++ ++K+
Sbjct: 124 SPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK 183
Query: 269 HL---QTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDS 324
+ + ++ + L E + + H L L + + H +L + +Y G + HL
Sbjct: 184 EVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRE 242
Query: 325 EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLL 384
R R A L++LHS + + + N++L+++ K++D+GL
Sbjct: 243 RVFSED----RARFYGA-EIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 385 KLVTGSHHAGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
K G+T C +L PE+ +Y D + GV + E++ GR
Sbjct: 297 K---EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 17/231 (7%)
Query: 229 ILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVV-IKRHLQTQIQN------FLHEV 281
IL ++F +G+G FG Y + +V +K ++QI+ E+
Sbjct: 15 ILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 74
Query: 282 KHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKL-TMRQRLSI 340
+ A +HH ++++L + + + LI +Y P G + L S + T+ + L+
Sbjct: 75 EIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVD 400
AL G + +H + P N+LL K++D+G +D
Sbjct: 135 ALMYCHGKKVIHRDIKP--------ENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLD 186
Query: 401 CFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
+L PE+ + ++ D++ GV EL+ G N I++V
Sbjct: 187 -YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 233 KHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIA 285
K N+F + ++G+G+FG + K + ++ ++++ + + ++ + + E + +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 286 RVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
H L L + + H +L + +Y G + HL T +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYGAEI 114
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--- 401
LE+LHS + + + N++L+++ K++D+GL K G+T C
Sbjct: 115 VSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTP 169
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+L PE+ +Y D + GV + E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 245 IGEGSFGLAYKGLLQDGSLVVIKR-HLQTQIQNF----LHEVKHIARVHHRHLVKLVGFC 299
IGEG++G+ YK G +K+ L+ + + + E+ + + H ++VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 300 EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLF 359
+ +L+++++ + +++ L EG + +T + S L G+ + H +
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAK---SFLLQLLNGIAYCHD--RRVL 122
Query: 360 HMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-DPELNL-SKNYSAGS 417
H + N+L+ K++D+GL + + V + P++ + SK YS
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 418 DVYSFGVFLLELISG 432
D++S G E+++G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 217 SPIDTQNLKQL--TILELKH--ATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKR 268
SP D +++ ++ + KH N F + ++G+G+FG + K + ++ ++K+
Sbjct: 127 SPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK 186
Query: 269 HL---QTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDS 324
+ + ++ + L E + + H L L + + H +L + +Y G + HL
Sbjct: 187 EVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRE 245
Query: 325 EGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLL 384
R R A L++LHS + + + N++L+++ K++D+GL
Sbjct: 246 RVFSED----RARFYGA-EIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
Query: 385 KLVTGSHHAGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
K G+T C +L PE+ +Y D + GV + E++ GR
Sbjct: 300 K---EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 233 KHATNNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIA 285
K N+F + ++G+G+FG + K + ++ ++++ + + ++ + + E + +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 286 RVHHRHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
H L L + + H +L + +Y G + HL T +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERARFYGAEI 114
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC--- 401
LE+LHS + + + N++L+++ K++D+GL K G+T C
Sbjct: 115 VSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTP 169
Query: 402 -FLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+L PE+ +Y D + GV + E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 238 NFSEINIIGEGSFGLAYKGL--LQDGSLVVIKR----HLQTQIQNFLHEVKHIARVHHRH 291
+ +++ +GEG++ YKG L D +LV +K H + + EV + + H +
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 292 LVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHL 351
+V L L+++Y+ + +++ +L D + + M +GL +
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNI----INMHNVKLFLFQLLRGLAYC 116
Query: 352 HSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNL-- 409
H + H + N+L+ E K++D+GL + + V + P L
Sbjct: 117 HR--QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 410 SKNYSAGSDVYSFGVFLLELISGR 433
S +YS D++ G E+ +GR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 243 NIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNF------LHEVKHIARVHHRHLVKL 295
+ +G G+FG G Q G V +K + +I++ E++++ H H++KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 296 VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLV 355
++ +Y+ G + + Y + + ++ R RL + +A H H +V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFD--YICKHGRVEEMEAR-RLFQQILSAVDYCHRHMVV 133
Query: 356 PPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSA 415
H + NVLL+ + AK++D+GL +++ + + PE+ + Y+
Sbjct: 134 ----HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 416 GS-DVYSFGVFLLELISG 432
D++S GV L L+ G
Sbjct: 190 PEVDIWSCGVILYALLCG 207
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S I G G++G L V + L Q+ +H E+
Sbjct: 21 TIWEVPERYQNLSPI---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 131
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEMTGYV 188
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGF------CEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
+ + + H +++ L+ EE + L+ + G N++ S+ KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQ-----KLTDD 125
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 126 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLCRH-TDDEMTGY 182
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 183 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 232 LKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIK--RHLQTQIQNFLHEVKHIARVH 288
L++A++ F EI ++G+G+FG K D IK RH + ++ L EV +A ++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLN 60
Query: 289 H-------------RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
H R+ VK ++ + +Y N + + L SE L +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQRDEYW 119
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS----- 390
+ L A L ++HS + H + + N+ ++E+ K+ D+GL K V S
Sbjct: 120 RLFRQILEA---LSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 391 ----HHAGS----TSAVDC--FLDPE-LNLSKNYSAGSDVYSFGVFLLELI 430
+ GS TSA+ ++ E L+ + +Y+ D YS G+ E I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 23 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 133
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TADEMTGYV 190
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 278 LHEVKHIARVH-HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
L EV + +V H ++++L E N L++D + G + ++L +E + + + R+
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRK 128
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ L L L+ + H + N+LL+++ K++D+G + S
Sbjct: 129 IMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV 183
Query: 397 SAVDCFLDPEL---NLSKN---YSAGSDVYSFGVFLLELISG 432
+L PE+ +++ N Y D++S GV + L++G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 23 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 133
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TADEMTGYV 190
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 23 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 133
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TADEMTGYV 190
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 27 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 137
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 138 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEMTGYV 194
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 195 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKR-----HLQTQIQNFLHEVKHIARVHHR 290
+ + I IG G++G+ + G V IK+ + T + L E+K + H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 291 HLVKLVGFCE------ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
+++ + E ++ D + ++ ++ S+ LT+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-----PLTLEHVRYFLYQL 167
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS---HHAGSTS--AV 399
+GL+++HS + H + SN+L+ EN K+ D+G+ + + S H T A
Sbjct: 168 LRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 400 DCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLILQV 451
+ PEL LS Y+ D++S G E+++ R+ G+N+ + Q LI+ V
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQ-LIMMV 278
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 275 QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT- 333
+N L EVKH +V L+ + + LI +Y+ G + L + EG+ +
Sbjct: 72 RNILEEVKH------PFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTAC 124
Query: 334 -MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
+S+ALG HLH + + + N++L K++D+GL K S H
Sbjct: 125 FYLAEISMALG------HLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIH 173
Query: 393 AGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
G+ + C ++ PE+ + ++ D +S G + ++++G
Sbjct: 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 21 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 131
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEMTGYV 188
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGXV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 274 IQNFLHEVKHIARVHHRHLVKLVGFCEENHQQ--LLIYDYIPNGNVQNHLYDSEGLPIGK 331
I+ E+ + ++ H ++VKLV ++ ++ ++++ + G V E +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM------EVPTLKP 133
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSH 391
L+ Q KG+E+LH + H + SN+L+ E+ K++D+G+ GS
Sbjct: 134 LSEDQARFYFQDLIKGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 392 HAGS-TSAVDCFLDPE-LNLSKNYSAGS--DVYSFGVFLLELISGR 433
S T F+ PE L+ ++ +G DV++ GV L + G+
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 28 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 138
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 139 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 195
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 196 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 18 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 128
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 185
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL--PIGKLTMRQRLSIALGAAK 346
H+H+V GF E+N ++ + ++ + L P + +RQ I LG
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLGC-- 128
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----F 402
++LH + H + N+ L E+ K+ D+GL T + G V C +
Sbjct: 129 --QYLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKKVLCGTPNY 181
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE+ K +S DV+S G + L+ G+
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKXQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 236 TNNFSEINIIGEGSFGLAYK------GLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++N+ +G+G+F + + GL ++ K+ Q E + ++ H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQRL-SIALGAAK 346
++V+L +E L++D + G + + E + ++Q L SIA +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G+ H + + N+LL + K++D+GL V S + +L
Sbjct: 124 GI----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 173
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ YS D+++ GV L L+ G
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 21 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 131
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 188
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 15 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 72 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 125
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 126 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 182
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 183 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNL-SKNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L + +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 96/223 (43%), Gaps = 23/223 (10%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EVKHIARVHHRHL 292
+ ++ +G G++G L + + L Q+ +H E++ + + H ++
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 293 VKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+ L+ E + + ++ ++ N + KLT + +G
Sbjct: 113 IGLLDVFTPATSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDHVQFLIYQILRG 166
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPEL 407
L+++HS + H + SN+ + E+ K+ D+GL + T G A + PE+
Sbjct: 167 LKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV-ATRWYRAPEI 222
Query: 408 NLS-KNYSAGSDVYSFGVFLLELISGREAH-GRNHSNSDQNLI 448
L+ +Y+ D++S G + EL++GR G +H N Q ++
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 265
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 28 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 138
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 139 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 195
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 196 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 28 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 138
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 139 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 195
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 196 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 238 NFSEINIIGEGSFG-------------LAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH- 283
++ + IG GS+G L +K L GS+ ++ + N L E+KH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 284 -IARVHHR-------HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
I R + R L ++ +CE + I G + D E + L +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGD----LASVITKGTKERQYLDEEFV----LRVM 117
Query: 336 QRLSIALGAA-KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT-GSHHA 393
+L++AL + + H+++ H + +NV L+ K+ D+GL +++ + A
Sbjct: 118 TQLTLALKECHRRSDGGHTVL----HRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLEL 429
+ ++ PE +Y+ SD++S G L EL
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 18 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 128
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 185
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 39 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 149
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 150 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 206
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 207 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 27 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 137
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 138 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 194
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 195 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 35 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 145
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 146 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 202
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 203 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL--PIGKLTMRQRLSIALGAAK 346
H+H+V GF E+N ++ + ++ + L P + +RQ I LG
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLGC-- 152
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----F 402
++LH + H + N+ L E+ K+ D+GL T + G V C +
Sbjct: 153 --QYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKKVLCGTPNY 205
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE+ K +S DV+S G + L+ G+
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL--PIGKLTMRQRLSIALGAAK 346
H+H+V GF E+N ++ + ++ + L P + +RQ I LG
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLGC-- 154
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----F 402
++LH + H + N+ L E+ K+ D+GL T + G V C +
Sbjct: 155 --QYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKKVLCGTPNY 207
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE+ K +S DV+S G + L+ G+
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 14 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 124
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 125 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 181
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 182 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 18 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 128
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 185
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 18 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 128
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARH-TDDEMTGYV 185
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 36 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 146
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 147 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 203
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 204 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 236 TNNFSEINIIGEGSFGLAYK------GLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++N+ +G+G+F + + GL ++ K+ Q E + ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQRL-SIALGAAK 346
++V+L +E L++D + G + + E + ++Q L SIA +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G+ H + + N+LL + K++D+GL V S + +L
Sbjct: 125 GI----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 174
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ YS D+++ GV L L+ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 84/193 (43%), Gaps = 13/193 (6%)
Query: 245 IGEGSFGLAYKGLLQ-DGSLVVIKR---HLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
IGEGS G+ + G V +K+ Q + + +EV + HH ++V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 301 ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFH 360
+ ++ +++ G + + + + ++ Q ++ L + L +LH+ + H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHT------RMNEEQIATVCLSVLRALSYLHN--QGVIH 164
Query: 361 MHFRTSNVLLEENYTAKVSDYGLLKLVTGS-HHAGSTSAVDCFLDPELNLSKNYSAGSDV 419
++ ++LL + K+SD+G V+ ++ PE+ Y D+
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 420 YSFGVFLLELISG 432
+S G+ ++E+I G
Sbjct: 225 WSLGIMVIEMIDG 237
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 238 NFSEINIIGEGSFG-------------LAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH- 283
++ + IG GS+G L +K L GS+ ++ + N L E+KH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 284 -IARVHHR-------HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
I R + R L ++ +CE + I G + D E + L +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGD----LASVITKGTKERQYLDEEFV----LRVM 117
Query: 336 QRLSIALGAA-KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT-GSHHA 393
+L++AL + + H+++ H + +NV L+ K+ D+GL +++ + A
Sbjct: 118 TQLTLALKECHRRSDGGHTVL----HRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLEL 429
+ ++ PE +Y+ SD++S G L EL
Sbjct: 174 KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 275 QNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT- 333
+N L EVKH +V L+ + + LI +Y+ G + L + EG+ +
Sbjct: 72 RNILEEVKH------PFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTAC 124
Query: 334 -MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHH 392
+S+ALG HLH + + + N++L K++D+GL K S H
Sbjct: 125 FYLAEISMALG------HLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIH 173
Query: 393 AGSTSAVDC----FLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
G+ + C ++ PE+ + ++ D +S G + ++++G
Sbjct: 174 DGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 23 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 133
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 190
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 13 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 123
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 124 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 180
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 181 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQIQNFLHEVKHIARVH 288
L + N+FS IIG G FG Y D G + +K + +I+ + + + +A ++
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQGETLA-LN 238
Query: 289 HRHLVKLV--GFC----------EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
R ++ LV G C + I D + G++ HL S+ + MR
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR- 295
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLL-KLVTGSHHAGS 395
A GLEH+H+ + + + +N+LL+E+ ++SD GL HA
Sbjct: 296 --FYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-- 349
Query: 396 TSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLI 448
+ ++ PE L Y + +D +S G L +L+ G R H D++ I
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF-RQHKTKDKHEI 402
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 237 NNFSEINIIGEGSFGLAYKGLLQDG----SLVVIKRHLQTQ---IQNFLHE--VKHIARV 287
+NF I ++G+GSFG +++ ++ V+K+ + Q ++ + E + +AR
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR- 81
Query: 288 HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKG 347
+H L +L + + + +++ G++ H+ S R R A
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD----EARARFYAA-EIISA 136
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FL 403
L LH + + + NVLL+ K++D+G+ K + G T+A C ++
Sbjct: 137 LMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN---GVTTATFCGTPDYI 191
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ Y D ++ GV L E++ G
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 12 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 122
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 123 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 179
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 180 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKXQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 22 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 132
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 133 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARH-TDDEMTGYV 189
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 190 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 13 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 123
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 124 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 180
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 181 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 236 TNNFSEINIIGEGSFGLAYK------GLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++N+ +G+G+F + + GL ++ K+ Q E + ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQRL-SIALGAAK 346
++V+L +E L++D + G + + E + ++Q L SIA +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G+ H + + N+LL + K++D+GL V S + +L
Sbjct: 125 GI----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 174
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ YS D+++ GV L L+ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 236 TNNFSEINIIGEGSFGLAYK------GLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHH 289
++N+ +G+G+F + + GL ++ K+ Q E + ++ H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQRL-SIALGAAK 346
++V+L +E L++D + G + + E + ++Q L SIA +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL 403
G+ H + + N+LL + K++D+GL V S + +L
Sbjct: 148 GI----------VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 197
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ YS D+++ GV L L+ G
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 22 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 132
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 133 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 189
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 190 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLK------------ 385
L I + A+ +E LHS L H + SN+ + KV D+GL+
Sbjct: 167 LHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 386 --LVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELI 430
+ + H G ++ PE NYS D++S G+ L EL+
Sbjct: 225 TPMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 21 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 131
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 188
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQIQNFLHEVKHIARVH 288
L + N+FS IIG G FG Y D G + +K + +I+ + + + +A ++
Sbjct: 181 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQGETLA-LN 237
Query: 289 HRHLVKLV--GFC----------EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
R ++ LV G C + I D + G++ HL S+ + MR
Sbjct: 238 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR- 294
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLL-KLVTGSHHAGS 395
A GLEH+H+ + + + +N+LL+E+ ++SD GL HA
Sbjct: 295 --FYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-- 348
Query: 396 TSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLI 448
+ ++ PE L Y + +D +S G L +L+ G R H D++ I
Sbjct: 349 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF-RQHKTKDKHEI 401
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQIQNFLHEVKHIARVH 288
L + N+FS IIG G FG Y D G + +K + +I+ + + + +A ++
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQGETLA-LN 238
Query: 289 HRHLVKLV--GFC----------EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
R ++ LV G C + I D + G++ HL S+ + MR
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR- 295
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLL-KLVTGSHHAGS 395
A GLEH+H+ + + + +N+LL+E+ ++SD GL HA
Sbjct: 296 --FYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-- 349
Query: 396 TSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLI 448
+ ++ PE L Y + +D +S G L +L+ G R H D++ I
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF-RQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQD-GSLVVIKRHLQTQIQNFLHEVKHIARVH 288
L + N+FS IIG G FG Y D G + +K + +I+ + + + +A ++
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQGETLA-LN 238
Query: 289 HRHLVKLV--GFC----------EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
R ++ LV G C + I D + G++ HL S+ + MR
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR- 295
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLL-KLVTGSHHAGS 395
A GLEH+H+ + + + +N+LL+E+ ++SD GL HA
Sbjct: 296 --FYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-- 349
Query: 396 TSAVDCFLDPE-LNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLI 448
+ ++ PE L Y + +D +S G L +L+ G R H D++ I
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF-RQHKTKDKHEI 402
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 278 LHEVKHIARVH-HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
L EV + +V H ++++L E N L++D + G + ++L +E + + + R+
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRK 115
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ L L L+ + H + N+LL+++ K++D+G +
Sbjct: 116 IMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 170
Query: 397 SAVDCFLDPEL---NLSKN---YSAGSDVYSFGVFLLELISG 432
+L PE+ +++ N Y D++S GV + L++G
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 39 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 149
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 150 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMXGYV 206
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 207 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 88/215 (40%), Gaps = 16/215 (7%)
Query: 221 TQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLHE 280
+++K++ + T FSE+ + E + G + + K+ L+ + + +E
Sbjct: 17 AEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLF------AVKCIPKKALKGKESSIENE 70
Query: 281 VKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSI 340
+ + ++ H ++V L E + L+ + G + + + + G T + ++
Sbjct: 71 IAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK-----GFYTEKDASTL 125
Query: 341 ALGAAKGLEHLHSLVPPLFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTS 397
+ +LH + + H + N+L +E +SD+GL K+ +
Sbjct: 126 IRQVLDAVYYLHRM--GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC 183
Query: 398 AVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
++ PE+ K YS D +S GV L+ G
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 125
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T AG
Sbjct: 126 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMAGF 182
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 183 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 125
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T AG
Sbjct: 126 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMAGF 182
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 183 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 12 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 67
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 121
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T AG
Sbjct: 122 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMAGF 178
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 179 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 239 FSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQN------FLHEVKHIARVHHRHL 292
+ ++ IGEG++G +K ++ +V + ++ + L E+ + + H+++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLH 352
V+L + + L++++ + +++ + +DS G L S KGL H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCN---GDLDPEIVKSFLFQLLKGLGFCH 118
Query: 353 SLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNL--S 410
S + H + N+L+ N K++++GL + S V + P L +
Sbjct: 119 SRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 411 KNYSAGSDVYSFGVFLLELISG 432
K YS D++S G EL +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANA 198
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 237 NNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIARVHH 289
N F + ++G+G+FG + K + ++ ++K+ + + ++ + L E + + H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 290 RHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
L L + + H +L + +Y G + HL R R A L
Sbjct: 68 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARFYGA-EIVSAL 121
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++LHS + + + N++L+++ K++D+GL K G+T C +L
Sbjct: 122 DYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 177
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGR 433
PE+ +Y D + GV + E++ GR
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 22 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 132
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 133 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV 189
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 190 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 237 NNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIARVHH 289
N F + ++G+G+FG + K + ++ ++K+ + + ++ + L E + + H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 290 RHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
L L + + H +L + +Y G + HL R R A L
Sbjct: 70 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARFYGA-EIVSAL 123
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++LHS + + + N++L+++ K++D+GL K G+T C +L
Sbjct: 124 DYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 179
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGR 433
PE+ +Y D + GV + E++ GR
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 237 NNFSEINIIGEGSFG----LAYKGLLQDGSLVVIKRHL---QTQIQNFLHEVKHIARVHH 289
N F + ++G+G+FG + K + ++ ++K+ + + ++ + L E + + H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 290 RHLVKLVGFCEENHQQL-LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
L L + + H +L + +Y G + HL R R A L
Sbjct: 69 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARFYGA-EIVSAL 122
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----FLD 404
++LHS + + + N++L+++ K++D+GL K G+T C +L
Sbjct: 123 DYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 178
Query: 405 PELNLSKNYSAGSDVYSFGVFLLELISGR 433
PE+ +Y D + GV + E++ GR
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 236 TNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHL-QTQIQNF----LHEVKHIARVHH 289
+ + ++ IG+G+FG +K + G V +K+ L + + + F L E+K + + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 290 RHLVKLVGFCEENHQQL--------LIYDYIPNGNVQNHLYDSEGL---PIGKLTMRQRL 338
++V L+ C L++D+ +D GL + K T+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIK 128
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
+ GL ++H + H + +NVL+ + K++D+GL + + + ++
Sbjct: 129 RVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 399 VD-----CFLDPELNL-SKNYSAGSDVYSFGVFLLELIS 431
+ + PEL L ++Y D++ G + E+ +
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 236 TNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHL-QTQIQNF----LHEVKHIARVHH 289
+ + ++ IG+G+FG +K + G V +K+ L + + + F L E+K + + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 290 RHLVKLVGFCEENHQQL--------LIYDYIPNGNVQNHLYDSEGL---PIGKLTMRQRL 338
++V L+ C L++D+ +D GL + K T+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIK 128
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
+ GL ++H + H + +NVL+ + K++D+GL + + + ++
Sbjct: 129 RVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 399 VD-----CFLDPELNL-SKNYSAGSDVYSFGVFLLELIS 431
+ + PEL L ++Y D++ G + E+ +
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 37/216 (17%)
Query: 238 NFSEINIIGEGSFG-------------LAYKGLLQDGSLVVIKRHLQTQIQNFLHEVKH- 283
++ + IG GS+G L +K L GS+ ++ + N L E+KH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 284 -IARVHHR-------HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
I R + R L ++ +CE + I G + D E + L +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGD----LASVITKGTKERQYLDEEFV----LRVM 117
Query: 336 QRLSIALGAA-KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT-GSHHA 393
+L++AL + + H+++ H + +NV L+ K+ D+GL +++ A
Sbjct: 118 TQLTLALKECHRRSDGGHTVL----HRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA 173
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLEL 429
++ PE +Y+ SD++S G L EL
Sbjct: 174 KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 278 LHEVKHIARVH-HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
L EV + +V H ++++L E N L++D + G + ++L +E + + + R+
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRK 128
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ L L L+ + H + N+LL+++ K++D+G +
Sbjct: 129 IMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183
Query: 397 SAVDCFLDPEL---NLSKN---YSAGSDVYSFGVFLLELISG 432
+L PE+ +++ N Y D++S GV + L++G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 236 TNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHL-QTQIQNF----LHEVKHIARVHH 289
+ + ++ IG+G+FG +K + G V +K+ L + + + F L E+K + + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 290 RHLVKLVGFCEENHQQL--------LIYDYIPNGNVQNHLYDSEGL---PIGKLTMRQRL 338
++V L+ C L++D+ +D GL + K T+ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIK 128
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
+ GL ++H + H + +NVL+ + K++D+GL + + + ++
Sbjct: 129 RVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 399 VD-----CFLDPELNL-SKNYSAGSDVYSFGVFLLELIS 431
+ + PEL L ++Y D++ G + E+ +
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 12 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 67
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCAKLTDD 121
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 122 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGY 178
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 179 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 236 TNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHL-QTQIQNF----LHEVKHIARVHH 289
+ + ++ IG+G+FG +K + G V +K+ L + + + F L E+K + + H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 290 RHLVKLVGFCEENHQQL--------LIYDYIPNGNVQNHLYDSEGL---PIGKLTMRQRL 338
++V L+ C L++D+ +D GL + K T+ +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIK 127
Query: 339 SIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSA 398
+ GL ++H + H + +NVL+ + K++D+GL + + + ++
Sbjct: 128 RVMQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 399 VD-----CFLDPELNL-SKNYSAGSDVYSFGVFLLELIS 431
+ + PEL L ++Y D++ G + E+ +
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYKGL---LQDGSLVVIKRHLQTQIQNFLHEVKH 283
+ I++ KH + I +GEG F +Y L L DG +KR L + Q+ E +
Sbjct: 23 MVIIDNKH----YLFIQKLGEGGF--SYVDLVEGLHDGHFYALKRILCHEQQD-REEAQR 75
Query: 284 IARVH----HRHLVKLVGFCEE----NHQQLLIYDYIPNGNVQNH---LYDSEGLPIGKL 332
A +H H ++++LV +C H+ L+ + G + N L D L
Sbjct: 76 EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF----L 131
Query: 333 TMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKL----VT 388
T Q L + LG +GLE +H+ H + +N+LL + + D G + V
Sbjct: 132 TEDQILWLLLGICRGLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189
Query: 389 GSHHA---GSTSAVDC---FLDPELNLSKNYSA---GSDVYSFGVFLLELISG 432
GS A +A C + PEL +++ +DV+S G L ++ G
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL--PIGKLTMRQRLSIALGAAK 346
H+H+V GF E+N ++ + ++ + L P + +RQ I LG
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLGC-- 130
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----F 402
++LH + H + N+ L E+ K+ D+GL T + G C +
Sbjct: 131 --QYLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKKTLCGTPNY 183
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE+ K +S DV+S G + L+ G+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL--PIGKLTMRQRLSIALGAAK 346
H+H+V GF E+N ++ + ++ + L P + +RQ I LG
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLGC-- 134
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----F 402
++LH + H + N+ L E+ K+ D+GL T + G C +
Sbjct: 135 --QYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKKTLCGTPNY 187
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE+ K +S DV+S G + L+ G+
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 239 FSEINIIGEGSFGLAYKG----LLQDGSLVVIKRH--LQTQIQNFLHEVKHIARVHHRHL 292
++ + ++G+GSFG K Q+ ++ VI + L EV+ + ++ H ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLH 352
+KL E++ ++ + G L+D E + + + I G+ ++H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGG----ELFD-EIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 353 SLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNL 409
+ H + N+LLE ++ K+ D+GL + ++ PE+ L
Sbjct: 139 K--HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-L 195
Query: 410 SKNYSAGSDVYSFGVFLLELISGREA-HGRNHSN 442
Y DV+S GV L L+SG +G+N +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDRGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 239 FSEINIIGEGSFGLAYKG----LLQDGSLVVIKRH--LQTQIQNFLHEVKHIARVHHRHL 292
++ + ++G+GSFG K Q+ ++ VI + L EV+ + ++ H ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLH 352
+KL E++ ++ + G L+D E + + + I G+ ++H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGG----ELFD-EIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 353 SLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNL 409
+ H + N+LLE ++ K+ D+GL + ++ PE+ L
Sbjct: 139 K--HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-L 195
Query: 410 SKNYSAGSDVYSFGVFLLELISGREA-HGRNHSN 442
Y DV+S GV L L+SG +G+N +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 289 HRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL--PIGKLTMRQRLSIALGAAK 346
H+H+V GF E+N ++ + ++ + L P + +RQ I LG
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLGC-- 130
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDC----F 402
++LH + H + N+ L E+ K+ D+GL T + G C +
Sbjct: 131 --QYLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKKTLCGTPNY 183
Query: 403 LDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ PE+ K +S DV+S G + L+ G+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 175
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 176 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 36 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 91
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 145
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 146 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMXGX 202
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 203 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 177
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 178 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDAGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 125
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 126 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGY 182
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 183 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 176
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 177 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
+GL+++HS + H + SN+ + E+ K+ D+GL + T G A + P
Sbjct: 146 RGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV-ATRWYRAP 201
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L+ +Y+ D++S G + EL++GR
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 237 NNFSEINIIGEGSFGLAYK-GLLQDGSLVVIKRHLQT----QIQNFLHEVKHIARVHH-R 290
N+ + +G G+ G +K + G ++ +K+ ++ + + L ++ + + H
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEH 350
++V+ G N + + + G L PI + + + + A L+
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 351 LHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFL-----DP 405
H ++ H + SN+LL+E K+ D+G+ + ++ ++ DP
Sbjct: 143 KHGVI----HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDP 198
Query: 406 ELNLSKNYSAGSDVYSFGVFLLELISGR 433
+Y +DV+S G+ L+EL +G+
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 170 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 170
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 171 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 36 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 91
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 145
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 146 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGY 202
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 203 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 38/233 (16%)
Query: 244 IIGEGSFGLAYKG----LLQDGSLVVIKRH--LQTQIQNFLHEVKHIARVHHRHLVKLVG 297
++G+GSFG K Q+ ++ VI + L EV+ + ++ H +++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 298 FCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAAKGLEHL 351
E++ ++ + G L+D ++ R+R S I G+ ++
Sbjct: 89 ILEDSSSFYIVGELYTGG----ELFD-------EIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 352 HSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELN 408
H + H + N+LLE ++ K+ D+GL + ++ PE+
Sbjct: 138 HK--HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV- 194
Query: 409 LSKNYSAGSDVYSFGVFLLELISGREA-HGRNHSNSDQNLILQVKRSCDLGKY 460
L Y DV+S GV L L+SG +G+N + + + + GKY
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--------ILKRVETGKY 239
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 35 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 90
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 144
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 145 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGY 201
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 202 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGL-LQDGSLVVIKRHLQTQIQNFLH------E 280
TI E+ N S + G G++G + G V +K+ L Q+ +H E
Sbjct: 12 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 67
Query: 281 VKHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMR 335
++ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDD 121
Query: 336 QRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGS 395
+ +GL+++HS + H + SN+ + E+ K+ D+GL + T G
Sbjct: 122 HVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGY 178
Query: 396 TSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 179 V-ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 185
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 186 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 237
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 234 HATNNFSEINIIGEGSFGLAY----KGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARV 287
H +N+ ++IG GS+G Y K ++ ++ + R + I + L E+ + R+
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82
Query: 288 HHRHLVKLVGFCEENHQQLLIYD--YIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA 345
++++L + LL +D YI + L PI LT +I
Sbjct: 83 KSDYIIRLYDLIIPD--DLLKFDELYIVLEIADSDLKKLFKTPIF-LTEEHIKTILYNLL 139
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT----------------- 388
G +H + H + +N LL ++ + KV D+GL + +
Sbjct: 140 LGENFIHE--SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 389 GSHHAG------STSAVDCFLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAHGRNHS 441
G H+ S + PEL L +NY+ D++S G EL++ ++H + +
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257
Query: 442 N 442
N
Sbjct: 258 N 258
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQD---GSLVVIKRHLQTQI--QNFLHEVKHI 284
+ + H ++ + + IG G+FG+A L++D LV +K + +N E+ +
Sbjct: 13 MPIMHDSDRYDFVKDIGSGNFGVA--RLMRDKLTKELVAVKYIERGAAIDENVQREIINH 70
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
+ H ++V+ +I +Y G + + ++ G+ + +
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNA-----GRFSEDEARFFFQQL 125
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLKLVTGSHHAGSTSAVDCF 402
G+ + HS+ + H + N LL+ + K+ D+G K ST +
Sbjct: 126 LSGVSYCHSM--QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 183
Query: 403 LDPELNLSKNYSAG-SDVYSFGVFLLELISG 432
+ PE+ L + Y +DV+S GV L ++ G
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYKGL-----LQDGSLVVIKRHLQTQI-----QN 276
+T+ ++ + + +G G F + K LQ + + KR ++ ++
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--M 334
EV + + H +++ L E +LI + + G + + L + E L + T +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGS 390
+Q L+ G+ +LHSL + H + N+ LL+ N K+ D+GL +
Sbjct: 121 KQILN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + F+ PE+ + +D++S GV L+SG
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 44/234 (18%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNF---------LHEVKHIA 285
+++F +++GEG++G+ + G +V IK+ I+ F L E+K +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKK-----IEPFDKPLFALRTLREIKILK 64
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------ 339
H +++ + + + YI +Q L+ ++ Q LS
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH--------RVISTQMLSDDHIQY 116
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--------- 390
+ ++ LH + H + SN+L+ N KV D+GL +++ S
Sbjct: 117 FIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 391 HHAGSTS--AVDCFLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAH-GRNH 440
+G T A + PE+ L S YS DV+S G L EL R GR++
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
+GL+++HS + H + SN+ + E+ K+ D+GL + T G A + P
Sbjct: 142 RGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYV-ATRWYRAP 197
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L+ +Y+ D++S G + EL++GR
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 307 LIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA-AKGLEHLHSLVPPLFHMHFRT 365
LI DYI G + HL E + I +G LEHLH L + + +
Sbjct: 136 LILDYINGGELFTHLSQRERF------TEHEVQIYVGEIVLALEHLHKL--GIIYRDIKL 187
Query: 366 SNVLLEENYTAKVSDYGLLK--LVTGSHHAGSTSAVDCFLDPEL--NLSKNYSAGSDVYS 421
N+LL+ N ++D+GL K + + A ++ P++ + D +S
Sbjct: 188 ENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWS 247
Query: 422 FGVFLLELISG 432
GV + EL++G
Sbjct: 248 LGVLMYELLTG 258
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 221
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 222 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 273
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 44/234 (18%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNF---------LHEVKHIA 285
+++F +++GEG++G+ + G +V IK+ I+ F L E+K +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKK-----IEPFDKPLFALRTLREIKILK 64
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------ 339
H +++ + + + YI +Q L+ ++ Q LS
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH--------RVISTQMLSDDHIQY 116
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS--------- 390
+ ++ LH + H + SN+L+ N KV D+GL +++ S
Sbjct: 117 FIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 391 HHAGSTS--AVDCFLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAH-GRNH 440
+G T A + PE+ L S YS DV+S G L EL R GR++
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ D GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDGGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ ++ PE+ + Y D++S GV + L+ G NH
Sbjct: 170 SHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 44/218 (20%)
Query: 244 IIGEGSFGLAYKGLLQD---GSLVVIKRHLQTQIQN---FLHEVKHIARVH-HRHLVKLV 296
++ EG F Y+ QD G +KR L + + + EV + ++ H ++V+
Sbjct: 35 VLAEGGFAFVYEA--QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 297 GFC----------EENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAK 346
FC + + L+ + G + L E G L+ L I +
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR--GPLSCDTVLKIFYQTCR 147
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAG------------ 394
++H+H PP+ H + N+LL T K+ D+G T SH+
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG--SATTISHYPDYSWSAQRRALVE 205
Query: 395 ---STSAVDCFLDPE-LNLSKNYSAG--SDVYSFGVFL 426
+ + + PE ++L N+ G D+++ G L
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
+GL+++HS + H + SNV + E+ ++ D+GL + A + P
Sbjct: 142 RGLKYIHS--AGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAP 197
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L+ +Y+ D++S G + EL+ G+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
+GL+++HS + H + SNV + E+ ++ D+GL + A + P
Sbjct: 142 RGLKYIHS--AGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAP 197
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L+ +Y+ D++S G + EL+ G+
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 228 TILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQIQNFLH------EV 281
TI E+ N S + G G++G L V + L Q+ +H E+
Sbjct: 16 TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 282 KHIARVHHRHLVKLVGFCE-----ENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQ 336
+ + + H +++ L+ E + + ++ ++ N + KLT
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN------IVKCQKLTDDH 126
Query: 337 RLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGST 396
+ +GL+++HS + H + SN+ + E+ K+ +GL + T G
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILGFGLARH-TDDEMTGYV 183
Query: 397 SAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGR 433
A + PE+ L+ +Y+ D++S G + EL++GR
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 26/228 (11%)
Query: 213 PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQD---GSLVVIK-- 267
P P+D L + H ++ + + IG G+FG+A L++D LV +K
Sbjct: 4 PAVAGPMD---------LPIMHDSDRYELVKDIGAGNFGVA--RLMRDKQANELVAVKYI 52
Query: 268 RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL 327
+ +N E+ + + H ++V+ ++ +Y G + + ++
Sbjct: 53 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--- 109
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLK 385
G+ + + G+ + H++ + H + N LL+ + K++D+G K
Sbjct: 110 --GRFSEDEARFFFQQLISGVSYAHAM--QVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
Query: 386 LVTGSHHAGSTSAVDCFLDPELNLSKNYSAG-SDVYSFGVFLLELISG 432
S ++ PE+ L K Y +DV+S GV L ++ G
Sbjct: 166 ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 32/212 (15%)
Query: 245 IGEGSFGL----AYKGLLQDGSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCE 300
+GEGSF + +K Q ++ +I + ++ Q + +K H ++VKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFH 76
Query: 301 ENHQQLLIYDYIPNGNV------QNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSL 354
+ L+ + + G + + H ++E I MR+ +S + H+H +
Sbjct: 77 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYI----MRKLVS-------AVSHMHDV 125
Query: 355 VPPLFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDC-FLDPELNLS 410
+ H + N+L +N K+ D+G +L + T + PEL
Sbjct: 126 --GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ 183
Query: 411 KNYSAGSDVYSFGVFLLELISGR---EAHGRN 439
Y D++S GV L ++SG+ ++H R+
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRS 215
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
+GL+++HS + H + SNV + E+ ++ D+GL + A + P
Sbjct: 134 RGLKYIHS--AGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATRWYRAP 189
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L+ +Y+ D++S G + EL+ G+
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 230 LELKHATNNFSEINIIGEGSFGLAYKGLLQD---GSLVVIK--RHLQTQIQNFLHEVKHI 284
L + H ++ + + IG G+FG+A L++D LV +K + +N E+ +
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVKREIINH 68
Query: 285 ARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGA 344
+ H ++V+ ++ +Y G + + ++ G+ + +
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA-----GRFSEDEARFFFQQL 123
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLKLVTGSHHAGSTSAVDCF 402
G+ + H++ + H + N LL+ + K+ D+G K ST +
Sbjct: 124 ISGVSYCHAM--QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 181
Query: 403 LDPELNLSKNYSAG-SDVYSFGVFLLELISG 432
+ PE+ L K Y +DV+S GV L ++ G
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 92/228 (40%), Gaps = 26/228 (11%)
Query: 213 PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQD---GSLVVIK-- 267
P P+D L + H ++ + + IG G+FG+A L++D LV +K
Sbjct: 4 PAVSGPMD---------LPIMHDSDRYELVKDIGSGNFGVAR--LMRDKQSNELVAVKYI 52
Query: 268 RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL 327
+ N E+ + + H ++V+ ++ +Y G + + ++
Sbjct: 53 ERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--- 109
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLK 385
G+ + + G+ + H++ + H + N LL+ + K+ D+G K
Sbjct: 110 --GRFSEDEARFFFQQLISGVSYCHAM--QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
Query: 386 LVTGSHHAGSTSAVDCFLDPELNLSKNYSAG-SDVYSFGVFLLELISG 432
ST ++ PE+ L K Y +DV+S GV L ++ G
Sbjct: 166 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLLQ-DGSLVVIKRHLQTQIQNF---------LHEVKHIA 285
+++F +++GEG++G+ + G +V IK+ I+ F L E+K +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKK-----IEPFDKPLFALRTLREIKILK 64
Query: 286 RVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------ 339
H +++ + + + YI +Q L+ ++ Q LS
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH--------RVISTQMLSDDHIQY 116
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS-- 397
+ ++ LH + H + SN+L+ N KV D+GL +++ S S
Sbjct: 117 FIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 398 ---------AVDCFLDPELNL-SKNYSAGSDVYSFGVFLLELISGREAH-GRNH 440
A + PE+ L S YS DV+S G L EL R GR++
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYKGL-----LQDGSLVVIKRHLQTQI-----QN 276
+T+ ++ + + +G G F + K LQ + + KR ++ ++
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--M 334
EV + + H +++ L E +LI + + G + + L + E L + T +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGS 390
+Q L+ G+ +LHSL + H + N+ LL+ N K+ D+GL +
Sbjct: 121 KQILN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + F+ PE+ + +D++S GV L+SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKL 386
P + MRQ + +G+++LH+ + H + N+ L ++ K+ D+GL K+
Sbjct: 142 PEARYFMRQTI-------QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
Query: 387 VTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
+ ++ PE+ K +S D++S G L L+ G+
Sbjct: 193 EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE---NYTAKVSDYGLLKLVT 388
T R+ I + +++LHS+ + H + N+L N K++D+G K T
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 389 GSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNH 440
+ + ++ PE+ + Y D +S GV L+ G NH
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNH 267
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 124 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 123 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 124 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYK-----GLLQDGSLVVIKRHLQTQI-----QN 276
+T+ ++ + + +G G F + K LQ + + KR ++ ++
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--M 334
EV + + H +++ L E +LI + + G + + L + E L + T +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGS 390
+Q L+ G+ +LHSL + H + N+ LL+ N K+ D+GL +
Sbjct: 121 KQILN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + F+ PE+ + +D++S GV L+SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 123 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYK-----GLLQDGSLVVIKRHLQTQI-----QN 276
+T+ ++ + + +G G F + K LQ + + KR ++ ++
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--M 334
EV + + H +++ L E +LI + + G + + L + E L + T +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGS 390
+Q L+ G+ +LHSL + H + N+ LL+ N K+ D+GL +
Sbjct: 121 KQILN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + F+ PE+ + +D++S GV L+SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 124 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKL 386
P + MRQ + +G+++LH+ + H + N+ L ++ K+ D+GL K+
Sbjct: 126 PEARYFMRQTI-------QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176
Query: 387 VTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE+ K +S D++S G L L+ G+
Sbjct: 177 EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 124 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 124 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 267 KRHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG 326
K ++++ +F +E++ I + + + + G + +IY+Y+ N ++ +D
Sbjct: 80 KISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK--FDEYF 137
Query: 327 LPIGK-----LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDY 381
+ K + ++ I ++H+ + H + SN+L+++N K+SD+
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 382 GLLKLVTGSHHAGSTSAVDCFLDPEL--NLSKNYSAGSDVYSFGVFL 426
G + + GS + F+ PE N S A D++S G+ L
Sbjct: 197 GESEYMVDKKIKGSRGTYE-FMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHA 393
L+ G+ +LHSL + H + N+ LL+ N K+ D+GL + +
Sbjct: 124 LN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYK-----GLLQDGSLVVIKRHLQTQI-----QN 276
+T+ ++ + + +G G F + K LQ + + KR ++ ++
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--M 334
EV + + H +++ L E +LI + + G + + L + E L + T +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGS 390
+Q L+ G+ +LHSL + H + N+ LL+ N K+ D+GL +
Sbjct: 121 KQILN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + F+ PE+ + +D++S GV L+SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKL 386
P + MRQ + +G+++LH+ + H + N+ L ++ K+ D+GL K+
Sbjct: 142 PEARYFMRQTI-------QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
Query: 387 VTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE+ K +S D++S G L L+ G+
Sbjct: 193 EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 40/241 (16%)
Query: 237 NNFSEINIIGEGSFGLAY----KGLLQDGSLVVIKRHLQTQI--QNFLHEVKHIARVHHR 290
+N+ ++IG GS+G Y K ++ ++ + R + I + L E+ + R+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 291 HLVKLVGFCEENHQQLLIYD--YIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGL 348
++++L + LL +D YI + L PI LT + +I G
Sbjct: 88 YIIRLHDLIIP--EDLLKFDELYIVLEIADSDLKKLFKTPIF-LTEQHVKTILYNLLLGE 144
Query: 349 EHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVT-------------------- 388
+ +H + H + +N LL ++ + K+ D+GL + +
Sbjct: 145 KFIHE--SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 389 GSHHAG------STSAVDCFLDPELN-LSKNYSAGSDVYSFGVFLLELISGREAHGRNHS 441
G H+ S + PEL L +NY+ D++S G EL++ ++H N +
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPT 262
Query: 442 N 442
N
Sbjct: 263 N 263
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/122 (19%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENY----TAKVSDYGLLKLVTGS 390
R+ ++ K +E+LH+ + H + SN+L + + ++ D+G K +
Sbjct: 116 REASAVLFTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173
Query: 391 HHAGSTSAVDC-FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLIL 449
+ T F+ PE+ + Y A D++S GV L +++G ++ + ++
Sbjct: 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA 233
Query: 450 QV 451
++
Sbjct: 234 RI 235
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENY----TAKVSDYGLLKLVTGSHHAGSTSAVD 400
K +E+LHS + H + SN+L + ++ D+G K + + T
Sbjct: 131 GKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYT 188
Query: 401 C-FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
F+ PE+ + Y G D++S G+ L +++G S++ + ++ ++
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGL-LKL 386
P + MRQ + +G+++LH+ + H + N+ L ++ K+ D+GL K+
Sbjct: 142 PEARYFMRQTI-------QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
Query: 387 VTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISGR 433
++ PE+ K +S D++S G L L+ G+
Sbjct: 193 EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE----NYTAKVSDYGLLKLVTGSHHA 393
L G+ +LHS + H + N++L + N K+ D+G+ + +
Sbjct: 118 LD-------GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 168
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 239 FSEINIIGEGSFGLAYKGLL-QDGSLVVIK---RHLQTQI--QNFLHEVKHIARVHHRHL 292
+ ++ +G G++G + + G+ V IK R Q+++ + E++ + + H ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 293 VKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS------IALGAAK 346
+ L+ + + D+ V + G +GKL ++L + K
Sbjct: 87 IGLLDVFTPDET---LDDFTDFYLVMPFM----GTDLGKLMKHEKLGEDRIQFLVYQMLK 139
Query: 347 GLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPE 406
GL ++H+ + H + N+ + E+ K+ D+GL + + PE
Sbjct: 140 GLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPE 195
Query: 407 LNLS-KNYSAGSDVYSFGVFLLELISGR 433
+ L+ Y+ D++S G + E+I+G+
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE----NYTAKVSDYGLLKLVTGSHHA 393
L G+ +LHS + H + N++L + N K+ D+G+ + +
Sbjct: 139 LD-------GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQR 337
EV + + H +++ L E +LI + + G + + L + E L + T ++Q
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEE----NYTAKVSDYGLLKLVTGSHHA 393
L G+ +LHS + H + N++L + N K+ D+G+ + +
Sbjct: 125 LD-------GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 394 GSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ F+ PE+ + +D++S GV L+SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 40/252 (15%)
Query: 195 SSVPSPSAELERGDISPYPGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAY 254
S PSP E G + + P+D + + E+ AT+ +G GSFG +
Sbjct: 43 SREPSPKTEDNEGVL--LTEKLKPVDYEYRE-----EVHWATHQLR----LGRGSFGEVH 91
Query: 255 KGL-LQDGSLVVIKRHLQTQIQNF-LHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYI 312
+ Q G +K+ +++ F E+ A + +V L G E + + +
Sbjct: 92 RMEDKQTGFQCAVKK---VRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 148
Query: 313 PNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA-KGLEHLHSLVPPLFHMHFRTSNVLLE 371
G++ + + LP R LG A +GLE+LHS + H + NVLL
Sbjct: 149 EGGSLGQLVKEQGCLP------EDRALYYLGQALEGLEYLHSRR--ILHGDVKADNVLLS 200
Query: 372 ENYT-AKVSDYGLL----------KLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVY 420
+ + A + D+G L+TG + G+ + + PE+ L ++ A DV+
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGT----ETHMAPEVVLGRSCDAKVDVW 256
Query: 421 SFGVFLLELISG 432
S +L +++G
Sbjct: 257 SSCCMMLHMLNG 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 40/252 (15%)
Query: 195 SSVPSPSAELERGDISPYPGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAY 254
S PSP E G + + P+D + + E+ AT+ +G GSFG +
Sbjct: 62 SREPSPKTEDNEGVL--LTEKLKPVDYEYRE-----EVHWATHQLR----LGRGSFGEVH 110
Query: 255 KGL-LQDGSLVVIKRHLQTQIQNF-LHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYI 312
+ Q G +K+ +++ F E+ A + +V L G E + + +
Sbjct: 111 RMEDKQTGFQCAVKK---VRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 167
Query: 313 PNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAA-KGLEHLHSLVPPLFHMHFRTSNVLLE 371
G++ + + LP R LG A +GLE+LHS + H + NVLL
Sbjct: 168 EGGSLGQLVKEQGCLP------EDRALYYLGQALEGLEYLHSRR--ILHGDVKADNVLLS 219
Query: 372 ENYT-AKVSDYGLL----------KLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVY 420
+ + A + D+G L+TG + G+ + + PE+ L ++ A DV+
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGT----ETHMAPEVVLGRSCDAKVDVW 275
Query: 421 SFGVFLLELISG 432
S +L +++G
Sbjct: 276 SSCCMMLHMLNG 287
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 345 AKGLEHLHSLVPPLFHMHFRTSNVLLEENY----TAKVSDYGLLKLVTGSHHAGSTSAVD 400
K +E+LHS + H + SN+L + ++ D+G K + + T
Sbjct: 131 GKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYT 188
Query: 401 C-FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQNLILQV 451
F+ PE+ + Y G D++S G+ L +++G S++ + ++ ++
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 227 LTILELKHATNNFSEINIIGEGSFGLAYK-----GLLQDGSLVVIKRHLQTQI-----QN 276
+T+ ++ + + +G G F + K LQ + + KR ++ ++
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 277 FLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--M 334
EV + + H +++ L E +LI + + G + + L + E L + T +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 335 RQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGS 390
+Q L+ G+ +LHSL + H + N+ LL+ N K+ D+GL +
Sbjct: 121 KQILN-------GVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 391 HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
+ + F+ PE+ + +D++S GV L+SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 332 LTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENY----TAKVSDYGLLKLV 387
+ R+ ++ K +E+LH+ + H + SN+L + + ++ D+G K +
Sbjct: 113 FSEREASAVLFTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 388 TGSHHAGSTSAVDC-FLDPELNLSKNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQN 446
+ T F+ PE+ + Y A D++S GV L ++G ++ +
Sbjct: 171 RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEE 230
Query: 447 LILQV 451
++ ++
Sbjct: 231 ILARI 235
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 346 KGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDP 405
+GL+++HS + H + SN+ + E+ K+ D+ L + T G A + P
Sbjct: 136 RGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFYLARH-TDDEMTGYV-ATRWYRAP 191
Query: 406 ELNLS-KNYSAGSDVYSFGVFLLELISGR 433
E+ L+ +Y+ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLS---K 411
+ H + NVLL EE+ K++D+G K++ + + +L PE+ +S
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 412 NYSAGSDVYSFGVFLLELISG 432
Y+ D +S GV L +SG
Sbjct: 195 GYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLS---K 411
+ H + NVLL EE+ K++D+G K++ + + +L PE+ +S
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 412 NYSAGSDVYSFGVFLLELISG 432
Y+ D +S GV L +SG
Sbjct: 194 GYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLS---K 411
+ H + NVLL EE+ K++D+G K++ + + +L PE+ +S
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 412 NYSAGSDVYSFGVFLLELISG 432
Y+ D +S GV L +SG
Sbjct: 195 GYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLS---K 411
+ H + NVLL EE+ K++D+G K++ + + +L PE+ +S
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 412 NYSAGSDVYSFGVFLLELISG 432
Y+ D +S GV L +SG
Sbjct: 195 GYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLS---K 411
+ H + NVLL EE+ K++D+G K++ + + +L PE+ +S
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 412 NYSAGSDVYSFGVFLLELISG 432
Y+ D +S GV L +SG
Sbjct: 201 GYNRAVDCWSLGVILFICLSG 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 26/228 (11%)
Query: 213 PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQD---GSLVVIK-- 267
P P+D L + H ++ + + IG G+FG+A L++D LV +K
Sbjct: 4 PAVSGPMD---------LPIMHDSDRYELVKDIGSGNFGVA--RLMRDKQSNELVAVKYI 52
Query: 268 RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL 327
+ +N E+ + + H ++V+ ++ +Y G + + ++
Sbjct: 53 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--- 109
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLK 385
G+ + + G+ + H++ + H + N LL+ + K+ +G K
Sbjct: 110 --GRFSEDEARFFFQQLISGVSYCHAM--QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Query: 386 LVTGSHHAGSTSAVDCFLDPELNLSKNYSAG-SDVYSFGVFLLELISG 432
ST ++ PE+ L K Y +DV+S GV L ++ G
Sbjct: 166 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 26/212 (12%)
Query: 238 NFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHL-------QTQIQNFLHEVKHIARVHHR 290
+F + +IG G+FG L++ V + L + + F E + +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 291 HLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LP--IGKLTMRQRLSIALGAAKG 347
+ L ++++ L+ DY G++ L E LP + + + + + IA+ +
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE-MVIAIDSVHQ 193
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYG-LLKLV-TGSHHAGSTSAVDCFLDP 405
L ++H + P N+L++ N +++D+G LKL+ G+ + ++ P
Sbjct: 194 LHYVHRDIKP--------DNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 245
Query: 406 ELNLSKN-----YSAGSDVYSFGVFLLELISG 432
E+ + Y D +S GV + E++ G
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLS---K 411
+ H + NVLL EE+ K++D+G K++ + + +L PE+ +S
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 412 NYSAGSDVYSFGVFLLELISG 432
Y+ D +S GV L +SG
Sbjct: 320 GYNRAVDCWSLGVILFICLSG 340
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 21/209 (10%)
Query: 236 TNNFSEINIIGEGSFGLAYKGLL-----QDGSLVVIKRHLQTQIQNFLHEVKHIARV-HH 289
T+ + IG+G+F + + + + + ++ + L + L I R+ H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 290 RHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLT--MRQRLSIALGAAKG 347
++V+L E L++D + G + + E + ++Q L L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL----- 117
Query: 348 LEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLVTGSHHAG-STSAVDCFL 403
H H + + H + N+LL + K++D+GL V G A + +L
Sbjct: 118 --HCHQM--GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 404 DPELNLSKNYSAGSDVYSFGVFLLELISG 432
PE+ + Y D+++ GV L L+ G
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLS---K 411
+ H + NVLL EE+ K++D+G K++ + + +L PE+ +S
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 412 NYSAGSDVYSFGVFLLELISG 432
Y+ D +S GV L +SG
Sbjct: 334 GYNRAVDCWSLGVILFICLSG 354
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 331 KLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS 390
+L Q ++ + L +LH+ + H ++ ++LL + K+SD+G ++
Sbjct: 137 RLNEEQIATVCEAVLQALAYLHA--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 194
Query: 391 -HHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
++ PE+ Y+ D++S G+ ++E++ G
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 26/228 (11%)
Query: 213 PGAVSPIDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQD---GSLVVIK-- 267
P P+D L + H ++ + + IG G+FG+A L++D LV +K
Sbjct: 4 PAVSGPMD---------LPIMHDSDRYELVKDIGSGNFGVA--RLMRDKQSNELVAVKYI 52
Query: 268 RHLQTQIQNFLHEVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGL 327
+ +N E+ + + H ++V+ ++ +Y G + + ++
Sbjct: 53 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--- 109
Query: 328 PIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTA--KVSDYGLLK 385
G+ + + G+ + H++ + H + N LL+ + K+ +G K
Sbjct: 110 --GRFSEDEARFFFQQLISGVSYCHAM--QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Query: 386 LVTGSHHAGSTSAVDCFLDPELNLSKNYSAG-SDVYSFGVFLLELISG 432
T ++ PE+ L K Y +DV+S GV L ++ G
Sbjct: 166 SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 358 LFHMHFRTSNVLL---EENYTAKVSDYGL-LKLVTGSHHAGSTSAVDCFLDPELNLSKNY 413
+ H + NVLL E + K+ D+G+ ++L AG F+ PE+ + Y
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 210
Query: 414 SAGSDVYSFGVFLLELISG 432
DV+ GV L L+SG
Sbjct: 211 GKPVDVWGCGVILFILLSG 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 90/226 (39%), Gaps = 21/226 (9%)
Query: 219 IDTQNLKQLTILELKHATNNFSEINIIGEGSFGLAYKGLLQD-----GSLVVIKRHLQTQ 273
+ T+NL + T+++ +G+G+F + + + + + ++ + L +
Sbjct: 13 LGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR 72
Query: 274 IQNFLHEVKHIARV-HHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKL 332
L I R+ H ++V+L E L++D + G + + E
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA 132
Query: 333 T--MRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE---ENYTAKVSDYGLLKLV 387
+ + Q L + + H+H + H + N+LL + K++D+GL V
Sbjct: 133 SHCIHQIL-------ESVNHIHQ--HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 183
Query: 388 TGSHHAG-STSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
G A + +L PE+ Y D+++ GV L L+ G
Sbjct: 184 QGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
EV + +V H +++ L E +LI + + G + + L E L + T S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----S 119
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHAGS 395
G+ +LH+ + H + N+ LL++N K+ D+GL + +
Sbjct: 120 FIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
F+ PE+ + +D++S GV L+SG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
EV + +V H +++ L E +LI + + G + + L E L + T S
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----S 119
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHAGS 395
G+ +LH+ + H + N+ LL++N K+ D+GL + +
Sbjct: 120 FIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
F+ PE+ + +D++S GV L+SG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
EV + +V H +++ L E +LI + + G + + L E L + T S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----S 119
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHAGS 395
G+ +LH+ + H + N+ LL++N K+ D+GL + +
Sbjct: 120 FIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
F+ PE+ + +D++S GV L+SG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
EV + +V H +++ L E +LI + + G + + L E L + T S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----S 119
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHAGS 395
G+ +LH+ + H + N+ LL++N K+ D+GL + +
Sbjct: 120 FIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
F+ PE+ + +D++S GV L+SG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
EV + +V H +++ L E +LI + + G + + L E L + T S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----S 119
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHAGS 395
G+ +LH+ + H + N+ LL++N K+ D+GL + +
Sbjct: 120 FIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
F+ PE+ + +D++S GV L+SG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 280 EVKHIARVHHRHLVKLVGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLS 339
EV + +V H +++ L E +LI + + G + + L E L + + S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESL-----SEEEATS 119
Query: 340 IALGAAKGLEHLHSLVPPLFHMHFRTSNV-LLEENYTA---KVSDYGLLKLVTGSHHAGS 395
G+ +LH+ + H + N+ LL++N K+ D+GL + +
Sbjct: 120 FIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 396 TSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
F+ PE+ + +D++S GV L+SG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 322 YDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE-----ENYTA 376
Y+ G+P+ + ++Q I+ GL+++H + H + NVL+E EN
Sbjct: 123 YEHRGIPL--IYVKQ---ISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQ 176
Query: 377 -KVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
K++D G H ++ + PE+ L + G+D++S + ELI+G
Sbjct: 177 IKIADLG--NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 322 YDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLE-----ENYTA 376
Y+ G+P+ + ++Q I+ GL+++H + H + NVL+E EN
Sbjct: 123 YEHRGIPL--IYVKQ---ISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQ 176
Query: 377 -KVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
K++D G H ++ + PE+ L + G+D++S + ELI+G
Sbjct: 177 IKIADLG--NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 229 ILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHL-------QTQIQNFLHEV 281
+ E++ +F I +IG G+FG +++ + + L + + F E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 282 KHIARVHHRHLVKL-VGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LP--IGKLTMRQR 337
+ + + L F +ENH L++ DY G++ L E LP + + + +
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVM-DYYVGGDLLTLLSKFEDKLPEDMARFYIGE- 183
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS 397
+ +A+ + L ++H + P NVLL+ N +++D+G + S+
Sbjct: 184 MVLAIDSIHQLHYVHRDIKP--------DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 398 AVDC--FLDPEL-----NLSKNYSAGSDVYSFGVFLLELISG 432
AV ++ PE+ + Y D +S GV + E++ G
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 229 ILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHL-------QTQIQNFLHEV 281
+ E++ +F I +IG G+FG +++ + + L + + F E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 282 KHIARVHHRHLVKL-VGFCEENHQQLLIYDYIPNGNVQNHLYDSEG-LP--IGKLTMRQR 337
+ + + L F +ENH L++ DY G++ L E LP + + + +
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVM-DYYVGGDLLTLLSKFEDKLPEDMARFYIGE- 199
Query: 338 LSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGSHHAGSTS 397
+ +A+ + L ++H + P NVLL+ N +++D+G + S+
Sbjct: 200 MVLAIDSIHQLHYVHRDIKP--------DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 398 AVDC--FLDPEL-----NLSKNYSAGSDVYSFGVFLLELISG 432
AV ++ PE+ + Y D +S GV + E++ G
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 245 IGEGSFGLAYKGLLQD------GSLVVIKRHLQTQIQNFLHEVKHIARVHHRHLVKLVGF 298
+G G FG+ ++ + V +K Q ++ + + +IAR HR+++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEI-SILNIAR--HRNILHLHES 69
Query: 299 CEENHQQLLIYDYIPNGNVQNHLYDSEGLPIGKLTMRQRLSIALGAAKGLEHLHSLVPPL 358
E + ++I+++I ++ ++ +L R+ +S + L+ LHS +
Sbjct: 70 FESMEELVMIFEFISGLDI----FERINTSAFELNEREIVSYVHQVCEALQFLHS--HNI 123
Query: 359 FHMHFRTSNVLLE--ENYTAKVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAG 416
H R N++ + + T K+ ++G + + + + PE++ S
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 417 SDVYSFGVFLLELISG 432
+D++S G + L+SG
Sbjct: 184 TDMWSLGTLVYVLLSG 199
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 377 KVSDYGLLKLVTGSHHAGSTSAVDCFLDPELNLSKNYSAGSDVYSFGVFLLELISG 432
K+ D+G + H GS + PE+ L+ + SD++SFG L EL +G
Sbjct: 202 KLIDFGCATFKSDYH--GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 27/243 (11%)
Query: 229 ILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQ--------------I 274
I EL + ++ I GS+G G+ +G V IKR T
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 275 QNFLHEVKHIARVHHRHLVKL----VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG 330
+ L E++ + HH +++ L V F E +L + + ++ ++D +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 331 KLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS 390
+ I L GL LH + H N+LL +N + D+ L + T
Sbjct: 134 QHIQYFMYHILL----GLHVLHE--AGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 391 HHAGSTSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ-NLI 448
+ + PEL + K ++ D++S G + E+ + R+A R + +Q N I
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKALFRGSTFYNQLNKI 246
Query: 449 LQV 451
++V
Sbjct: 247 VEV 249
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 27/243 (11%)
Query: 229 ILELKHATNNFSEINIIGEGSFGLAYKGLLQDGSLVVIKRHLQTQ--------------I 274
I EL + ++ I GS+G G+ +G V IKR T
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 275 QNFLHEVKHIARVHHRHLVKL----VGFCEENHQQLLIYDYIPNGNVQNHLYDSEGLPIG 330
+ L E++ + HH +++ L V F E +L + + ++ ++D +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 331 KLTMRQRLSIALGAAKGLEHLHSLVPPLFHMHFRTSNVLLEENYTAKVSDYGLLKLVTGS 390
+ I L GL LH + H N+LL +N + D+ L + T
Sbjct: 134 QHIQYFMYHILL----GLHVLHE--AGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 391 HHAGSTSAVDCFLDPELNLS-KNYSAGSDVYSFGVFLLELISGREAHGRNHSNSDQ-NLI 448
+ + PEL + K ++ D++S G + E+ + R+A R + +Q N I
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKALFRGSTFYNQLNKI 246
Query: 449 LQV 451
++V
Sbjct: 247 VEV 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,957,116
Number of Sequences: 62578
Number of extensions: 592734
Number of successful extensions: 3359
Number of sequences better than 100.0: 941
Number of HSP's better than 100.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 627
Number of HSP's that attempted gapping in prelim test: 1814
Number of HSP's gapped (non-prelim): 982
length of query: 530
length of database: 14,973,337
effective HSP length: 103
effective length of query: 427
effective length of database: 8,527,803
effective search space: 3641371881
effective search space used: 3641371881
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)