Query 009646
Match_columns 530
No_of_seqs 188 out of 2216
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 09:52:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 5.6E-36 1.9E-40 303.5 39.3 404 48-484 1-424 (425)
2 3nrn_A Uncharacterized protein 100.0 4.2E-33 1.5E-37 281.7 41.4 397 48-497 1-413 (421)
3 1s3e_A Amine oxidase [flavin-c 100.0 4.3E-33 1.5E-37 289.2 34.3 427 46-501 3-468 (520)
4 3nks_A Protoporphyrinogen oxid 100.0 2.3E-32 7.8E-37 281.2 29.5 407 47-486 2-473 (477)
5 3i6d_A Protoporphyrinogen oxid 100.0 1.9E-32 6.5E-37 281.4 25.8 411 47-487 5-468 (470)
6 2vvm_A Monoamine oxidase N; FA 100.0 8.6E-32 2.9E-36 278.0 29.2 414 47-489 39-487 (495)
7 2yg5_A Putrescine oxidase; oxi 100.0 1.4E-31 4.6E-36 273.5 28.8 416 46-488 4-452 (453)
8 2ivd_A PPO, PPOX, protoporphyr 100.0 2.6E-31 8.9E-36 273.3 29.1 405 46-488 15-474 (478)
9 1sez_A Protoporphyrinogen oxid 100.0 5.5E-31 1.9E-35 272.7 29.0 412 46-489 12-495 (504)
10 3lov_A Protoporphyrinogen oxid 100.0 3.8E-31 1.3E-35 271.8 27.5 414 47-489 4-467 (475)
11 4gde_A UDP-galactopyranose mut 100.0 2.4E-31 8.1E-36 276.3 23.9 415 41-486 4-478 (513)
12 4dgk_A Phytoene dehydrogenase; 100.0 4.1E-30 1.4E-34 266.0 28.3 420 47-492 1-496 (501)
13 4dsg_A UDP-galactopyranose mut 100.0 3.2E-29 1.1E-33 256.2 22.1 406 45-484 7-452 (484)
14 1b37_A Protein (polyamine oxid 100.0 1E-28 3.5E-33 253.1 25.3 409 46-489 3-460 (472)
15 3k7m_X 6-hydroxy-L-nicotine ox 100.0 2.5E-27 8.4E-32 240.4 34.0 388 48-486 2-425 (431)
16 2iid_A L-amino-acid oxidase; f 100.0 1.2E-26 4.2E-31 239.6 28.7 416 45-489 31-486 (498)
17 2jae_A L-amino acid oxidase; o 100.0 2.5E-27 8.7E-32 244.1 22.0 234 239-488 231-486 (489)
18 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 6.8E-26 2.3E-30 222.3 26.5 224 247-486 111-341 (342)
19 1rsg_A FMS1 protein; FAD bindi 99.9 2.1E-26 7.3E-31 238.4 22.5 402 46-489 7-509 (516)
20 4gut_A Lysine-specific histone 99.9 3.2E-26 1.1E-30 244.0 22.7 213 262-485 543-775 (776)
21 2b9w_A Putative aminooxidase; 99.9 1E-24 3.4E-29 220.6 27.7 391 46-484 5-423 (424)
22 2xag_A Lysine-specific histone 99.9 3.1E-24 1.1E-28 229.9 30.9 227 242-490 567-832 (852)
23 2z3y_A Lysine-specific histone 99.9 3E-24 1E-28 227.6 29.9 226 242-488 396-659 (662)
24 3ayj_A Pro-enzyme of L-phenyla 99.9 2E-23 6.7E-28 217.5 19.1 253 238-497 338-689 (721)
25 2bcg_G Secretory pathway GDP d 99.9 6.4E-20 2.2E-24 186.2 34.1 383 40-484 4-438 (453)
26 1yvv_A Amine oxidase, flavin-c 99.9 6.3E-21 2.2E-25 186.5 25.3 215 254-489 112-329 (336)
27 1d5t_A Guanine nucleotide diss 99.8 1.2E-17 4.3E-22 168.2 34.7 378 46-484 5-427 (433)
28 1v0j_A UDP-galactopyranose mut 99.8 4.1E-21 1.4E-25 191.5 8.9 247 45-343 5-273 (399)
29 3p1w_A Rabgdi protein; GDI RAB 99.8 2.3E-19 8E-24 179.6 21.5 255 45-305 18-313 (475)
30 1i8t_A UDP-galactopyranose mut 99.8 2.1E-19 7.3E-24 176.9 13.8 242 48-344 2-260 (367)
31 2bi7_A UDP-galactopyranose mut 99.8 2.8E-18 9.6E-23 169.9 19.1 237 47-341 3-260 (384)
32 3hdq_A UDP-galactopyranose mut 99.8 3.1E-18 1.1E-22 168.3 15.2 344 45-485 27-389 (397)
33 3dme_A Conserved exported prot 99.7 2.4E-15 8.3E-20 148.6 22.0 207 248-483 150-367 (369)
34 1ryi_A Glycine oxidase; flavop 99.7 3.7E-14 1.3E-18 140.9 27.7 197 248-484 164-360 (382)
35 1vg0_A RAB proteins geranylger 99.6 1.9E-12 6.6E-17 133.4 38.4 177 149-345 282-461 (650)
36 3ps9_A TRNA 5-methylaminomethy 99.6 3.3E-14 1.1E-18 151.6 25.3 56 248-306 417-473 (676)
37 2gag_B Heterotetrameric sarcos 99.6 2.8E-13 9.7E-18 135.6 30.8 201 249-487 175-376 (405)
38 3nyc_A D-arginine dehydrogenas 99.6 2E-13 6.9E-18 135.4 28.2 200 248-484 154-356 (381)
39 1y56_B Sarcosine oxidase; dehy 99.6 7.6E-14 2.6E-18 138.6 25.0 205 248-486 149-355 (382)
40 3dje_A Fructosyl amine: oxygen 99.6 8.7E-14 3E-18 140.9 24.1 202 249-485 162-383 (438)
41 2oln_A NIKD protein; flavoprot 99.6 1.2E-12 4E-17 130.7 30.4 56 249-307 154-209 (397)
42 3pvc_A TRNA 5-methylaminomethy 99.6 1.2E-13 4.3E-18 147.2 24.6 56 248-306 412-469 (689)
43 3oz2_A Digeranylgeranylglycero 99.6 3.8E-13 1.3E-17 134.1 25.2 58 45-107 2-60 (397)
44 3kkj_A Amine oxidase, flavin-c 99.6 2.3E-13 7.8E-18 129.3 21.5 40 47-86 2-41 (336)
45 2gf3_A MSOX, monomeric sarcosi 99.6 4.3E-12 1.5E-16 126.3 30.0 203 249-486 151-364 (389)
46 3cgv_A Geranylgeranyl reductas 99.5 4.6E-12 1.6E-16 126.4 26.7 56 47-107 4-60 (397)
47 3axb_A Putative oxidoreductase 99.5 2.4E-12 8.1E-17 130.7 24.6 199 249-485 182-417 (448)
48 3da1_A Glycerol-3-phosphate de 99.5 5E-12 1.7E-16 131.1 26.6 220 248-501 170-408 (561)
49 2e1m_A L-glutamate oxidase; L- 99.5 5.6E-13 1.9E-17 129.8 17.3 64 45-108 42-129 (376)
50 3nix_A Flavoprotein/dehydrogen 99.5 3.1E-12 1.1E-16 128.7 21.5 57 249-306 107-166 (421)
51 2uzz_A N-methyl-L-tryptophan o 99.5 5E-12 1.7E-16 125.0 22.0 60 249-312 150-209 (372)
52 2rgh_A Alpha-glycerophosphate 99.5 5.6E-11 1.9E-15 123.5 30.0 58 249-308 189-252 (571)
53 3i3l_A Alkylhalidase CMLS; fla 99.4 8.1E-12 2.8E-16 129.9 23.0 57 249-307 129-189 (591)
54 3e1t_A Halogenase; flavoprotei 99.4 2.2E-11 7.6E-16 125.4 22.4 56 249-306 112-172 (512)
55 3rp8_A Flavoprotein monooxygen 99.4 1.5E-11 5.2E-16 123.0 20.5 61 44-106 20-80 (407)
56 2i0z_A NAD(FAD)-utilizing dehy 99.4 2.4E-12 8.3E-17 130.2 14.7 58 247-306 133-191 (447)
57 3v76_A Flavoprotein; structura 99.4 3.3E-12 1.1E-16 127.2 15.0 56 248-306 132-187 (417)
58 3ihg_A RDME; flavoenzyme, anth 99.4 1.5E-10 5E-15 120.1 27.6 60 46-107 4-63 (535)
59 1pj5_A N,N-dimethylglycine oxi 99.4 3.3E-10 1.1E-14 123.5 29.6 57 249-307 152-208 (830)
60 3atr_A Conserved archaeal prot 99.3 2.9E-10 1E-14 115.2 23.5 56 250-307 102-163 (453)
61 1c0p_A D-amino acid oxidase; a 99.3 5.4E-11 1.9E-15 117.1 17.5 40 45-84 4-43 (363)
62 3fmw_A Oxygenase; mithramycin, 99.3 1.1E-10 3.8E-15 121.1 19.9 62 249-311 149-213 (570)
63 2gmh_A Electron transfer flavo 99.3 3.2E-09 1.1E-13 110.6 30.9 41 46-86 34-80 (584)
64 2qa1_A PGAE, polyketide oxygen 99.3 3.2E-10 1.1E-14 116.0 22.0 65 41-107 5-69 (500)
65 3c4n_A Uncharacterized protein 99.3 1E-10 3.5E-15 116.8 17.4 55 249-306 173-236 (405)
66 1y0p_A Fumarate reductase flav 99.3 1.4E-10 4.9E-15 120.9 18.8 58 248-306 255-317 (571)
67 3g3e_A D-amino-acid oxidase; F 99.3 1E-11 3.4E-16 121.7 9.3 189 249-489 143-336 (351)
68 4at0_A 3-ketosteroid-delta4-5a 99.3 9.8E-11 3.3E-15 120.4 16.7 57 249-306 203-264 (510)
69 2qcu_A Aerobic glycerol-3-phos 99.2 1.2E-09 4.1E-14 112.1 23.7 58 248-308 149-212 (501)
70 2gqf_A Hypothetical protein HI 99.2 8.7E-11 3E-15 116.6 14.7 57 247-306 108-168 (401)
71 2qa2_A CABE, polyketide oxygen 99.2 6.1E-10 2.1E-14 113.9 21.3 61 45-107 10-70 (499)
72 1k0i_A P-hydroxybenzoate hydro 99.2 1.3E-09 4.4E-14 108.4 23.2 35 47-81 2-36 (394)
73 1qo8_A Flavocytochrome C3 fuma 99.2 2.1E-10 7.2E-15 119.5 17.6 58 248-306 250-312 (566)
74 2dkh_A 3-hydroxybenzoate hydro 99.2 3.9E-09 1.3E-13 111.4 27.3 65 41-107 26-91 (639)
75 3nlc_A Uncharacterized protein 99.2 2.4E-10 8.4E-15 116.9 14.3 57 249-307 221-278 (549)
76 4hb9_A Similarities with proba 99.2 1.7E-09 5.7E-14 108.2 19.6 60 48-107 2-61 (412)
77 3itj_A Thioredoxin reductase 1 99.1 7.2E-10 2.5E-14 107.7 12.7 44 44-87 19-66 (338)
78 3k30_A Histamine dehydrogenase 99.0 4.7E-10 1.6E-14 119.6 10.9 69 19-87 361-431 (690)
79 1mo9_A ORF3; nucleotide bindin 99.0 4.2E-09 1.4E-13 108.5 16.9 61 247-308 254-318 (523)
80 1d4d_A Flavocytochrome C fumar 99.0 4.3E-09 1.5E-13 109.5 16.8 58 248-306 255-317 (572)
81 3lxd_A FAD-dependent pyridine 99.0 1.5E-09 5E-14 108.8 12.5 63 247-311 193-256 (415)
82 2wdq_A Succinate dehydrogenase 99.0 4.6E-09 1.6E-13 109.4 16.2 59 248-307 143-207 (588)
83 1rp0_A ARA6, thiazole biosynth 99.0 3.4E-09 1.2E-13 100.1 13.9 40 46-85 38-78 (284)
84 2x3n_A Probable FAD-dependent 99.0 6E-10 2E-14 111.1 8.6 61 249-311 108-172 (399)
85 3alj_A 2-methyl-3-hydroxypyrid 99.0 4.9E-09 1.7E-13 103.6 15.1 59 46-106 10-68 (379)
86 2bs2_A Quinol-fumarate reducta 99.0 4.4E-09 1.5E-13 110.5 15.3 58 248-307 158-221 (660)
87 4a9w_A Monooxygenase; baeyer-v 99.0 1.9E-09 6.4E-14 105.6 11.7 39 47-85 3-41 (357)
88 4dna_A Probable glutathione re 99.0 1.1E-09 3.6E-14 111.4 9.7 61 247-309 210-271 (463)
89 2h88_A Succinate dehydrogenase 99.0 7.2E-09 2.5E-13 108.0 16.1 58 248-307 155-218 (621)
90 3o0h_A Glutathione reductase; 99.0 6.8E-10 2.3E-14 113.4 7.9 59 247-308 231-290 (484)
91 3fg2_P Putative rubredoxin red 99.0 1E-08 3.5E-13 102.2 16.1 63 247-311 183-246 (404)
92 1chu_A Protein (L-aspartate ox 99.0 5.5E-09 1.9E-13 107.7 14.5 40 45-85 6-45 (540)
93 4fk1_A Putative thioredoxin re 99.0 4E-09 1.4E-13 100.8 12.6 41 43-84 2-42 (304)
94 3lzw_A Ferredoxin--NADP reduct 99.0 1.3E-09 4.5E-14 105.6 9.2 39 47-85 7-45 (332)
95 3uox_A Otemo; baeyer-villiger 98.9 5.6E-09 1.9E-13 107.7 13.9 41 45-85 7-47 (545)
96 3iwa_A FAD-dependent pyridine 98.9 6.3E-09 2.2E-13 106.0 13.2 64 246-311 200-263 (472)
97 3lad_A Dihydrolipoamide dehydr 98.9 6.8E-09 2.3E-13 105.9 13.4 58 247-306 220-280 (476)
98 2xdo_A TETX2 protein; tetracyc 98.9 5.8E-09 2E-13 103.8 12.2 61 46-106 25-86 (398)
99 2bry_A NEDD9 interacting prote 98.9 4.7E-09 1.6E-13 107.3 11.7 40 45-84 90-129 (497)
100 3oc4_A Oxidoreductase, pyridin 98.9 4.9E-09 1.7E-13 106.1 11.8 61 247-310 188-248 (452)
101 4ap3_A Steroid monooxygenase; 98.9 2.8E-09 9.7E-14 110.0 10.0 41 45-85 19-59 (549)
102 2vou_A 2,6-dihydroxypyridine h 98.9 6.6E-09 2.3E-13 103.4 11.9 62 46-108 4-65 (397)
103 2zbw_A Thioredoxin reductase; 98.9 6.1E-09 2.1E-13 101.1 11.0 40 46-85 4-43 (335)
104 3jsk_A Cypbp37 protein; octame 98.9 6.6E-09 2.3E-13 99.0 10.3 40 46-85 78-119 (344)
105 2aqj_A Tryptophan halogenase, 98.9 1.7E-08 5.9E-13 104.5 14.4 57 249-307 166-223 (538)
106 2cdu_A NADPH oxidase; flavoenz 98.9 1.3E-08 4.6E-13 102.9 12.9 64 246-311 189-252 (452)
107 3ics_A Coenzyme A-disulfide re 98.9 3.7E-08 1.3E-12 103.2 16.6 61 247-311 227-287 (588)
108 3s5w_A L-ornithine 5-monooxyge 98.9 4.3E-09 1.5E-13 107.0 9.1 39 46-84 29-72 (463)
109 2cul_A Glucose-inhibited divis 98.9 2.8E-08 9.6E-13 90.8 13.6 53 250-305 70-124 (232)
110 2e5v_A L-aspartate oxidase; ar 98.9 3.7E-08 1.3E-12 99.9 15.8 57 248-307 119-177 (472)
111 3f8d_A Thioredoxin reductase ( 98.8 6.9E-09 2.3E-13 100.0 9.7 37 47-85 15-51 (323)
112 3ab1_A Ferredoxin--NADP reduct 98.8 1.5E-08 5.3E-13 99.3 12.2 40 46-85 13-52 (360)
113 1zk7_A HGII, reductase, mercur 98.8 1.9E-08 6.5E-13 102.3 13.2 59 247-308 215-273 (467)
114 1kf6_A Fumarate reductase flav 98.8 1.8E-08 6.1E-13 105.1 13.1 58 248-307 134-198 (602)
115 3r9u_A Thioredoxin reductase; 98.8 1E-08 3.5E-13 98.4 10.6 41 46-87 3-44 (315)
116 1pn0_A Phenol 2-monooxygenase; 98.8 1.3E-06 4.3E-11 92.4 27.3 59 47-107 8-71 (665)
117 1ps9_A 2,4-dienoyl-COA reducta 98.8 1.4E-08 4.8E-13 107.9 12.4 65 20-87 349-413 (671)
118 2yqu_A 2-oxoglutarate dehydrog 98.8 1.1E-08 3.6E-13 103.8 10.7 59 247-308 207-266 (455)
119 2weu_A Tryptophan 5-halogenase 98.8 4E-08 1.4E-12 101.2 15.1 57 249-307 174-231 (511)
120 1ges_A Glutathione reductase; 98.8 1.8E-08 6E-13 101.9 12.3 59 247-307 207-266 (450)
121 2qae_A Lipoamide, dihydrolipoy 98.8 1.2E-08 4.1E-13 103.8 11.0 39 47-85 2-40 (468)
122 2e4g_A Tryptophan halogenase; 98.8 3.8E-08 1.3E-12 102.1 14.7 56 249-306 195-252 (550)
123 2pyx_A Tryptophan halogenase; 98.8 6.6E-08 2.2E-12 99.8 16.1 56 249-306 176-233 (526)
124 3c96_A Flavin-containing monoo 98.8 2.2E-08 7.5E-13 100.0 11.9 59 46-106 3-62 (410)
125 3dk9_A Grase, GR, glutathione 98.8 3.9E-08 1.3E-12 100.3 14.0 60 247-307 227-294 (478)
126 1xdi_A RV3303C-LPDA; reductase 98.8 3.8E-09 1.3E-13 108.3 6.4 61 247-310 222-283 (499)
127 2bc0_A NADH oxidase; flavoprot 98.8 4.1E-08 1.4E-12 100.4 13.8 62 247-311 235-296 (490)
128 3gwf_A Cyclohexanone monooxyge 98.8 9.8E-09 3.3E-13 105.8 9.1 40 46-85 7-47 (540)
129 2r9z_A Glutathione amide reduc 98.8 4.7E-08 1.6E-12 99.1 13.9 58 247-307 206-265 (463)
130 1fec_A Trypanothione reductase 98.8 1.3E-08 4.3E-13 104.1 9.5 60 247-308 230-290 (490)
131 2zxi_A TRNA uridine 5-carboxym 98.8 1.8E-08 6.3E-13 103.5 10.4 54 250-306 125-180 (637)
132 3d1c_A Flavin-containing putat 98.8 3.2E-08 1.1E-12 97.3 11.7 38 47-85 4-42 (369)
133 1w4x_A Phenylacetone monooxyge 98.8 2.2E-08 7.4E-13 103.7 10.9 41 45-85 14-54 (542)
134 1zmd_A Dihydrolipoyl dehydroge 98.8 1.3E-08 4.6E-13 103.6 9.1 40 46-85 5-44 (474)
135 3ntd_A FAD-dependent pyridine 98.8 3.7E-08 1.3E-12 102.7 12.7 63 248-311 192-272 (565)
136 2gjc_A Thiazole biosynthetic e 98.8 2.2E-08 7.5E-13 95.0 9.8 39 47-85 65-105 (326)
137 3urh_A Dihydrolipoyl dehydroge 98.8 7.5E-08 2.5E-12 98.5 14.4 41 45-85 23-63 (491)
138 2e1m_C L-glutamate oxidase; L- 98.7 2.3E-09 7.7E-14 93.3 2.4 96 391-490 50-155 (181)
139 3dgh_A TRXR-1, thioredoxin red 98.7 4.8E-08 1.7E-12 99.7 12.6 63 247-310 226-293 (483)
140 2v3a_A Rubredoxin reductase; a 98.7 2.1E-07 7.2E-12 92.0 16.9 62 247-311 186-248 (384)
141 2wpf_A Trypanothione reductase 98.7 1.2E-08 4E-13 104.4 7.9 60 247-308 234-294 (495)
142 3gyx_A Adenylylsulfate reducta 98.7 1.7E-07 5.9E-12 98.3 16.7 57 249-306 167-233 (662)
143 3ces_A MNMG, tRNA uridine 5-ca 98.7 3.2E-08 1.1E-12 102.2 10.9 54 250-306 126-181 (651)
144 4g6h_A Rotenone-insensitive NA 98.7 1.1E-07 3.8E-12 97.0 14.8 57 246-305 270-331 (502)
145 2ywl_A Thioredoxin reductase r 98.7 5.7E-08 1.9E-12 84.9 10.7 52 251-306 59-110 (180)
146 2gv8_A Monooxygenase; FMO, FAD 98.7 6.9E-08 2.4E-12 97.5 12.6 41 46-86 5-47 (447)
147 1onf_A GR, grase, glutathione 98.7 5.9E-08 2E-12 99.4 12.0 60 247-308 216-277 (500)
148 1jnr_A Adenylylsulfate reducta 98.7 2.4E-07 8.1E-12 97.6 16.7 57 249-307 152-219 (643)
149 3qvp_A Glucose oxidase; oxidor 98.7 1.2E-07 4.1E-12 97.9 14.1 57 259-315 238-302 (583)
150 3ef6_A Toluene 1,2-dioxygenase 98.7 4E-08 1.4E-12 98.1 9.9 61 248-311 185-246 (410)
151 3fpz_A Thiazole biosynthetic e 98.7 1.6E-08 5.6E-13 97.6 6.8 62 46-107 64-132 (326)
152 2q0l_A TRXR, thioredoxin reduc 98.7 9.1E-08 3.1E-12 91.6 11.9 37 48-85 2-39 (311)
153 3h8l_A NADH oxidase; membrane 98.7 1.3E-07 4.5E-12 94.3 13.5 53 248-306 218-270 (409)
154 2q7v_A Thioredoxin reductase; 98.7 8.9E-08 3.1E-12 92.3 11.5 39 46-85 7-45 (325)
155 2xve_A Flavin-containing monoo 98.7 1.5E-07 5E-12 95.4 13.5 39 48-86 3-47 (464)
156 1vdc_A NTR, NADPH dependent th 98.7 5.3E-08 1.8E-12 94.3 9.8 33 46-78 7-39 (333)
157 1q1r_A Putidaredoxin reductase 98.7 3.2E-07 1.1E-11 92.1 15.5 63 247-311 190-255 (431)
158 1dxl_A Dihydrolipoamide dehydr 98.7 2.3E-07 7.8E-12 94.4 14.7 40 46-85 5-44 (470)
159 4b1b_A TRXR, thioredoxin reduc 98.7 8.2E-08 2.8E-12 98.4 11.0 64 246-311 261-324 (542)
160 3cp8_A TRNA uridine 5-carboxym 98.7 2.3E-07 7.8E-12 95.8 14.2 55 250-307 119-175 (641)
161 2eq6_A Pyruvate dehydrogenase 98.6 9.6E-08 3.3E-12 96.9 10.9 58 247-307 209-272 (464)
162 3cgb_A Pyridine nucleotide-dis 98.6 2.7E-07 9.1E-12 94.0 14.2 62 247-311 226-287 (480)
163 3fbs_A Oxidoreductase; structu 98.6 2.3E-07 8E-12 88.0 12.8 35 47-81 2-36 (297)
164 1ojt_A Surface protein; redox- 98.6 1.7E-07 5.7E-12 95.6 12.5 39 47-85 6-44 (482)
165 1v59_A Dihydrolipoamide dehydr 98.6 9.2E-08 3.2E-12 97.5 10.4 40 46-85 4-43 (478)
166 4eqs_A Coenzyme A disulfide re 98.6 6.1E-07 2.1E-11 90.1 15.8 60 246-311 186-245 (437)
167 1n4w_A CHOD, cholesterol oxida 98.6 4E-07 1.4E-11 93.1 14.4 63 252-314 225-296 (504)
168 2r0c_A REBC; flavin adenine di 98.6 2.6E-07 8.8E-12 95.7 12.5 60 46-107 25-84 (549)
169 1trb_A Thioredoxin reductase; 98.6 1.4E-07 4.7E-12 90.8 9.8 39 46-85 4-42 (320)
170 1nhp_A NADH peroxidase; oxidor 98.6 7.9E-07 2.7E-11 89.7 15.7 62 247-311 190-251 (447)
171 3kd9_A Coenzyme A disulfide re 98.6 4.9E-07 1.7E-11 91.3 14.1 62 246-311 188-249 (449)
172 3t37_A Probable dehydrogenase; 98.6 2.3E-07 7.8E-12 95.9 11.8 54 260-315 223-280 (526)
173 3h28_A Sulfide-quinone reducta 98.6 3.8E-07 1.3E-11 91.6 12.9 38 48-85 3-42 (430)
174 1fl2_A Alkyl hydroperoxide red 98.6 1.7E-07 5.7E-12 89.7 9.6 37 47-85 1-37 (310)
175 3klj_A NAD(FAD)-dependent dehy 98.6 1.9E-07 6.6E-12 92.0 10.2 39 45-83 7-45 (385)
176 2a8x_A Dihydrolipoyl dehydroge 98.6 3.8E-07 1.3E-11 92.5 12.4 38 47-85 3-40 (464)
177 1coy_A Cholesterol oxidase; ox 98.5 8.4E-07 2.9E-11 90.8 14.2 62 252-314 230-301 (507)
178 3q9t_A Choline dehydrogenase a 98.5 1.2E-06 4E-11 90.6 15.2 56 259-314 217-278 (577)
179 1ebd_A E3BD, dihydrolipoamide 98.5 6.9E-07 2.4E-11 90.4 13.3 38 47-85 3-40 (455)
180 3hyw_A Sulfide-quinone reducta 98.5 3.8E-07 1.3E-11 91.5 10.6 35 48-82 3-39 (430)
181 1lvl_A Dihydrolipoamide dehydr 98.5 1.3E-06 4.3E-11 88.4 14.5 39 46-85 4-42 (458)
182 3sx6_A Sulfide-quinone reducta 98.5 1.9E-06 6.6E-11 86.6 15.3 36 47-82 4-42 (437)
183 4gcm_A TRXR, thioredoxin reduc 98.5 1.1E-07 3.9E-12 91.0 6.0 40 45-85 4-43 (312)
184 1hyu_A AHPF, alkyl hydroperoxi 98.5 1.1E-06 3.9E-11 90.2 13.3 39 45-85 210-248 (521)
185 3fim_B ARYL-alcohol oxidase; A 98.5 4.2E-07 1.5E-11 93.6 9.9 58 258-315 218-285 (566)
186 3vrd_B FCCB subunit, flavocyto 98.4 4.2E-07 1.4E-11 90.4 8.5 37 48-84 3-41 (401)
187 4a5l_A Thioredoxin reductase; 98.4 1.3E-07 4.6E-12 90.6 4.6 36 46-81 3-38 (314)
188 2jbv_A Choline oxidase; alcoho 98.4 1.3E-06 4.5E-11 90.1 11.1 54 260-314 221-281 (546)
189 1xhc_A NADH oxidase /nitrite r 98.4 8.8E-07 3E-11 86.7 8.8 33 48-81 9-41 (367)
190 3cty_A Thioredoxin reductase; 98.3 5.4E-07 1.9E-11 86.5 5.0 40 46-86 15-54 (319)
191 4b63_A L-ornithine N5 monooxyg 98.3 3.3E-06 1.1E-10 86.3 11.0 41 44-84 36-76 (501)
192 2vdc_G Glutamate synthase [NAD 98.3 7.2E-07 2.5E-11 89.8 5.9 43 45-87 120-162 (456)
193 3l8k_A Dihydrolipoyl dehydroge 98.2 5.1E-07 1.8E-11 91.6 4.3 39 47-85 4-42 (466)
194 1o94_A Tmadh, trimethylamine d 98.2 1.3E-06 4.6E-11 93.3 6.9 66 21-87 361-429 (729)
195 2hqm_A GR, grase, glutathione 98.2 7.9E-07 2.7E-11 90.5 4.5 59 247-306 225-285 (479)
196 3pl8_A Pyranose 2-oxidase; sub 98.2 1.1E-06 3.8E-11 92.0 5.6 40 46-85 45-84 (623)
197 3ihm_A Styrene monooxygenase A 98.2 9E-07 3.1E-11 88.7 4.7 35 46-80 21-55 (430)
198 3qfa_A Thioredoxin reductase 1 98.2 1.6E-06 5.6E-11 89.0 6.3 40 46-85 31-78 (519)
199 3ic9_A Dihydrolipoamide dehydr 98.1 8.7E-07 3E-11 90.5 3.6 61 247-310 214-278 (492)
200 2a87_A TRXR, TR, thioredoxin r 98.1 1.7E-06 5.7E-11 83.8 4.9 40 45-85 12-51 (335)
201 3c4a_A Probable tryptophan hyd 98.1 2.5E-06 8.5E-11 84.1 5.3 35 48-82 1-37 (381)
202 3dgz_A Thioredoxin reductase 2 98.1 2.5E-06 8.7E-11 87.0 5.5 63 247-310 224-291 (488)
203 3g5s_A Methylenetetrahydrofola 98.0 5.2E-06 1.8E-10 79.6 6.0 37 48-84 2-38 (443)
204 1ebd_A E3BD, dihydrolipoamide 97.9 8.9E-05 3E-09 74.8 14.0 35 47-81 170-204 (455)
205 2gag_A Heterotetrameric sarcos 97.9 4.2E-06 1.4E-10 92.2 3.9 42 46-87 127-168 (965)
206 1v59_A Dihydrolipoamide dehydr 97.9 0.00011 3.8E-09 74.6 14.1 36 47-82 183-218 (478)
207 1y56_A Hypothetical protein PH 97.9 3E-06 1E-10 86.5 2.3 40 47-87 108-147 (493)
208 2hqm_A GR, grase, glutathione 97.9 0.00012 4.1E-09 74.3 13.7 37 46-82 184-220 (479)
209 2gqw_A Ferredoxin reductase; f 97.9 9.5E-06 3.2E-10 80.6 5.3 58 247-311 186-244 (408)
210 1lqt_A FPRA; NADP+ derivative, 97.9 7.4E-06 2.5E-10 82.5 4.5 41 47-87 3-50 (456)
211 1cjc_A Protein (adrenodoxin re 97.9 1E-05 3.4E-10 81.6 5.4 42 46-87 5-48 (460)
212 1gte_A Dihydropyrimidine dehyd 97.8 1.1E-05 3.7E-10 89.6 5.6 41 46-86 186-227 (1025)
213 1ojt_A Surface protein; redox- 97.8 0.00013 4.3E-09 74.2 12.7 35 47-81 185-219 (482)
214 2gqw_A Ferredoxin reductase; f 97.8 0.0002 6.9E-09 71.0 13.8 36 47-82 145-180 (408)
215 2a8x_A Dihydrolipoyl dehydroge 97.8 0.00027 9.2E-09 71.4 14.7 35 47-81 171-205 (464)
216 1kdg_A CDH, cellobiose dehydro 97.8 1.4E-05 4.9E-10 82.6 5.3 59 254-314 201-269 (546)
217 1lvl_A Dihydrolipoamide dehydr 97.8 0.00013 4.4E-09 73.7 11.6 36 47-82 171-206 (458)
218 2x8g_A Thioredoxin glutathione 97.7 2E-05 6.7E-10 82.6 5.2 35 45-79 105-139 (598)
219 3s5w_A L-ornithine 5-monooxyge 97.7 0.00075 2.6E-08 68.1 16.4 37 46-82 226-264 (463)
220 1ju2_A HydroxynitrIle lyase; f 97.7 1E-05 3.5E-10 83.2 2.2 61 254-314 200-269 (536)
221 1m6i_A Programmed cell death p 97.7 2.3E-05 8E-10 79.8 4.8 61 248-311 226-287 (493)
222 1dxl_A Dihydrolipoamide dehydr 97.7 0.00027 9.4E-09 71.5 12.2 36 47-82 177-212 (470)
223 3ic9_A Dihydrolipoamide dehydr 97.7 0.00064 2.2E-08 69.2 14.8 38 46-83 173-210 (492)
224 1m6i_A Programmed cell death p 97.6 0.00044 1.5E-08 70.3 13.5 35 47-81 180-218 (493)
225 3urh_A Dihydrolipoyl dehydroge 97.6 0.00059 2E-08 69.5 14.3 37 46-82 197-233 (491)
226 1trb_A Thioredoxin reductase; 97.6 0.00046 1.6E-08 65.8 12.7 34 47-80 145-178 (320)
227 1xhc_A NADH oxidase /nitrite r 97.6 0.00058 2E-08 66.6 12.4 33 48-80 144-176 (367)
228 1gpe_A Protein (glucose oxidas 97.4 0.00013 4.3E-09 75.9 5.9 56 259-314 242-305 (587)
229 3ab1_A Ferredoxin--NADP reduct 97.4 0.00073 2.5E-08 65.7 10.6 34 47-80 163-196 (360)
230 3dgz_A Thioredoxin reductase 2 97.4 0.0026 8.8E-08 64.6 14.8 34 46-79 184-217 (488)
231 3uox_A Otemo; baeyer-villiger 97.3 0.002 6.7E-08 66.3 12.6 36 46-81 184-219 (545)
232 2zbw_A Thioredoxin reductase; 97.2 0.003 1E-07 60.5 13.1 34 47-80 152-185 (335)
233 3cty_A Thioredoxin reductase; 97.2 0.0016 5.5E-08 62.0 10.7 34 47-80 155-188 (319)
234 2e1m_B L-glutamate oxidase; L- 97.2 0.00034 1.2E-08 56.1 4.7 112 290-422 3-118 (130)
235 1fl2_A Alkyl hydroperoxide red 97.2 0.0023 7.8E-08 60.6 11.0 34 47-80 144-177 (310)
236 3d1c_A Flavin-containing putat 97.1 0.0027 9.1E-08 61.8 11.3 34 47-80 166-199 (369)
237 3qfa_A Thioredoxin reductase 1 97.0 0.0085 2.9E-07 61.2 14.7 33 47-79 210-242 (519)
238 1vdc_A NTR, NADPH dependent th 97.0 0.0046 1.6E-07 59.1 11.9 34 47-80 159-192 (333)
239 2x8g_A Thioredoxin glutathione 96.8 0.014 4.7E-07 60.9 13.9 33 47-79 286-318 (598)
240 3f8d_A Thioredoxin reductase ( 96.7 0.013 4.4E-07 55.5 12.3 35 46-80 153-187 (323)
241 2g1u_A Hypothetical protein TM 96.6 0.0023 7.8E-08 53.7 5.4 40 41-80 13-52 (155)
242 3lzw_A Ferredoxin--NADP reduct 96.6 0.01 3.5E-07 56.5 10.4 34 47-80 154-187 (332)
243 3fwz_A Inner membrane protein 96.2 0.0074 2.5E-07 49.5 6.1 35 46-80 6-40 (140)
244 1nhp_A NADH peroxidase; oxidor 96.2 0.0054 1.9E-07 61.4 6.3 39 46-84 148-186 (447)
245 3klj_A NAD(FAD)-dependent dehy 96.2 0.0047 1.6E-07 60.4 5.3 39 47-85 146-184 (385)
246 1lss_A TRK system potassium up 96.1 0.0059 2E-07 49.9 5.2 33 48-80 5-37 (140)
247 4gcm_A TRXR, thioredoxin reduc 96.0 0.0056 1.9E-07 58.0 4.9 36 47-82 145-180 (312)
248 3ic5_A Putative saccharopine d 95.9 0.0082 2.8E-07 47.3 4.8 34 47-80 5-39 (118)
249 3k6j_A Protein F01G10.3, confi 95.9 0.013 4.4E-07 58.1 7.0 43 39-81 46-88 (460)
250 3llv_A Exopolyphosphatase-rela 95.8 0.011 3.6E-07 48.6 5.3 34 47-80 6-39 (141)
251 2eq6_A Pyruvate dehydrogenase 95.8 0.0091 3.1E-07 60.1 5.7 58 47-107 169-226 (464)
252 1f0y_A HCDH, L-3-hydroxyacyl-C 95.8 0.011 3.6E-07 55.8 5.9 34 47-80 15-48 (302)
253 2yqu_A 2-oxoglutarate dehydrog 95.7 0.01 3.4E-07 59.6 5.7 58 47-107 167-224 (455)
254 1id1_A Putative potassium chan 95.7 0.014 4.8E-07 48.6 5.7 34 47-80 3-36 (153)
255 2v3a_A Rubredoxin reductase; a 95.7 0.013 4.3E-07 57.4 6.2 39 47-85 145-183 (384)
256 3lk7_A UDP-N-acetylmuramoylala 95.6 0.01 3.6E-07 59.3 5.4 51 46-107 8-58 (451)
257 1ges_A Glutathione reductase; 95.5 0.017 5.7E-07 57.9 6.2 58 47-107 167-224 (450)
258 4a5l_A Thioredoxin reductase; 95.4 0.014 4.7E-07 55.2 4.9 35 47-81 152-186 (314)
259 1pzg_A LDH, lactate dehydrogen 95.2 0.022 7.4E-07 54.3 5.6 36 45-80 7-43 (331)
260 2bc0_A NADH oxidase; flavoprot 95.1 0.023 7.9E-07 57.6 6.1 59 46-107 193-252 (490)
261 2r9z_A Glutathione amide reduc 95.1 0.021 7.2E-07 57.4 5.7 58 47-107 166-223 (463)
262 3l6d_A Putative oxidoreductase 95.0 0.031 1.1E-06 52.6 6.3 40 41-80 3-42 (306)
263 4e12_A Diketoreductase; oxidor 95.0 0.027 9.2E-07 52.4 5.8 34 47-80 4-37 (283)
264 2hmt_A YUAA protein; RCK, KTN, 95.0 0.024 8.1E-07 46.4 4.8 32 48-79 7-38 (144)
265 3k96_A Glycerol-3-phosphate de 95.0 0.024 8.1E-07 54.6 5.4 35 45-79 27-61 (356)
266 3ado_A Lambda-crystallin; L-gu 95.0 0.024 8.2E-07 53.3 5.2 33 48-80 7-39 (319)
267 3cgb_A Pyridine nucleotide-dis 95.0 0.018 6E-07 58.3 4.6 59 46-107 185-243 (480)
268 1zmd_A Dihydrolipoyl dehydroge 94.9 0.026 8.9E-07 56.9 5.7 37 47-83 178-214 (474)
269 1q1r_A Putidaredoxin reductase 94.9 0.032 1.1E-06 55.4 6.3 58 47-107 149-207 (431)
270 3tl2_A Malate dehydrogenase; c 94.9 0.03 1E-06 52.8 5.7 35 45-79 6-41 (315)
271 3doj_A AT3G25530, dehydrogenas 94.9 0.031 1E-06 52.8 5.6 37 44-80 18-54 (310)
272 3c85_A Putative glutathione-re 94.8 0.031 1E-06 48.1 5.2 34 47-80 39-73 (183)
273 3ef6_A Toluene 1,2-dioxygenase 94.8 0.032 1.1E-06 55.0 6.0 58 47-107 143-201 (410)
274 3i83_A 2-dehydropantoate 2-red 94.8 0.029 9.9E-07 53.2 5.4 33 48-80 3-35 (320)
275 3g0o_A 3-hydroxyisobutyrate de 94.8 0.031 1.1E-06 52.6 5.4 35 46-80 6-40 (303)
276 2i6t_A Ubiquitin-conjugating e 94.8 0.026 9E-07 52.8 4.8 42 39-80 6-49 (303)
277 2x5o_A UDP-N-acetylmuramoylala 94.7 0.022 7.6E-07 56.7 4.5 35 48-82 6-40 (439)
278 3l4b_C TRKA K+ channel protien 94.7 0.027 9.3E-07 50.1 4.5 33 48-80 1-33 (218)
279 3kd9_A Coenzyme A disulfide re 94.6 0.038 1.3E-06 55.2 6.1 39 47-85 148-186 (449)
280 3gwf_A Cyclohexanone monooxyge 94.6 0.035 1.2E-06 56.8 5.9 36 46-81 177-212 (540)
281 4eqs_A Coenzyme A disulfide re 94.6 0.036 1.2E-06 55.2 5.7 58 47-107 147-204 (437)
282 2qyt_A 2-dehydropantoate 2-red 94.5 0.023 7.7E-07 53.9 3.9 36 43-78 4-45 (317)
283 1onf_A GR, grase, glutathione 94.5 0.034 1.2E-06 56.5 5.4 58 47-107 176-233 (500)
284 3hn2_A 2-dehydropantoate 2-red 94.5 0.03 1E-06 52.9 4.6 33 48-80 3-35 (312)
285 2q0l_A TRXR, thioredoxin reduc 94.5 0.04 1.4E-06 51.9 5.4 36 47-82 143-178 (311)
286 2y0c_A BCEC, UDP-glucose dehyd 94.4 0.04 1.4E-06 55.3 5.6 35 46-80 7-41 (478)
287 2dpo_A L-gulonate 3-dehydrogen 94.4 0.041 1.4E-06 52.0 5.2 34 47-80 6-39 (319)
288 1zk7_A HGII, reductase, mercur 94.4 0.044 1.5E-06 55.1 5.8 57 47-107 176-232 (467)
289 2hjr_A Malate dehydrogenase; m 94.3 0.048 1.6E-06 51.8 5.6 33 48-80 15-48 (328)
290 1lld_A L-lactate dehydrogenase 94.3 0.045 1.5E-06 51.9 5.4 33 47-79 7-41 (319)
291 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.042 1.4E-06 48.7 4.7 34 46-79 30-63 (223)
292 2ew2_A 2-dehydropantoate 2-red 94.3 0.044 1.5E-06 51.8 5.3 32 48-79 4-35 (316)
293 1y6j_A L-lactate dehydrogenase 94.3 0.047 1.6E-06 51.6 5.4 36 45-80 5-42 (318)
294 2qae_A Lipoamide, dihydrolipoy 94.3 0.046 1.6E-06 55.0 5.7 37 47-83 174-210 (468)
295 2raf_A Putative dinucleotide-b 94.3 0.055 1.9E-06 47.7 5.5 36 46-81 18-53 (209)
296 3ghy_A Ketopantoate reductase 94.2 0.046 1.6E-06 52.2 5.3 33 47-79 3-35 (335)
297 2cdu_A NADPH oxidase; flavoenz 94.2 0.043 1.5E-06 54.9 5.3 58 47-107 149-207 (452)
298 3fg2_P Putative rubredoxin red 94.2 0.056 1.9E-06 53.2 5.9 58 47-107 142-200 (404)
299 1ks9_A KPA reductase;, 2-dehyd 94.1 0.051 1.8E-06 50.6 5.4 33 48-80 1-33 (291)
300 4dio_A NAD(P) transhydrogenase 94.1 0.056 1.9E-06 52.4 5.6 34 47-80 190-223 (405)
301 3eag_A UDP-N-acetylmuramate:L- 94.1 0.049 1.7E-06 51.7 5.3 48 47-107 4-52 (326)
302 3gg2_A Sugar dehydrogenase, UD 94.1 0.05 1.7E-06 54.1 5.4 33 48-80 3-35 (450)
303 3vtf_A UDP-glucose 6-dehydroge 94.1 0.061 2.1E-06 52.9 5.8 36 45-80 19-54 (444)
304 3lxd_A FAD-dependent pyridine 94.1 0.062 2.1E-06 53.0 6.1 58 47-107 152-210 (415)
305 1bg6_A N-(1-D-carboxylethyl)-L 94.0 0.053 1.8E-06 52.3 5.4 33 47-79 4-36 (359)
306 3l8k_A Dihydrolipoyl dehydroge 94.0 0.073 2.5E-06 53.4 6.6 38 46-83 171-208 (466)
307 3g17_A Similar to 2-dehydropan 94.0 0.038 1.3E-06 51.7 4.1 32 48-79 3-34 (294)
308 1kyq_A Met8P, siroheme biosynt 94.0 0.035 1.2E-06 50.9 3.7 33 47-79 13-45 (274)
309 3g79_A NDP-N-acetyl-D-galactos 94.0 0.051 1.8E-06 54.2 5.2 36 46-81 17-54 (478)
310 1zcj_A Peroxisomal bifunctiona 94.0 0.067 2.3E-06 53.5 6.0 35 46-80 36-70 (463)
311 3ntd_A FAD-dependent pyridine 93.9 0.056 1.9E-06 55.8 5.6 58 47-107 151-208 (565)
312 4ap3_A Steroid monooxygenase; 93.9 0.055 1.9E-06 55.5 5.5 36 46-81 190-225 (549)
313 2ewd_A Lactate dehydrogenase,; 93.9 0.059 2E-06 51.0 5.3 34 47-80 4-38 (317)
314 3dk9_A Grase, GR, glutathione 93.9 0.061 2.1E-06 54.2 5.7 58 47-107 187-244 (478)
315 2xve_A Flavin-containing monoo 93.9 0.05 1.7E-06 54.6 5.0 38 46-83 196-233 (464)
316 4huj_A Uncharacterized protein 93.9 0.037 1.2E-06 49.3 3.6 35 46-80 22-57 (220)
317 4e21_A 6-phosphogluconate dehy 93.8 0.063 2.1E-06 51.6 5.4 36 45-80 20-55 (358)
318 2uyy_A N-PAC protein; long-cha 93.8 0.075 2.6E-06 50.2 5.9 35 46-80 29-63 (316)
319 1t2d_A LDH-P, L-lactate dehydr 93.8 0.074 2.5E-06 50.3 5.8 34 47-80 4-38 (322)
320 2a87_A TRXR, TR, thioredoxin r 93.8 0.056 1.9E-06 51.6 5.0 36 47-82 155-190 (335)
321 4b1b_A TRXR, thioredoxin reduc 93.8 0.072 2.5E-06 54.4 6.0 59 45-107 221-279 (542)
322 3p2y_A Alanine dehydrogenase/p 93.8 0.055 1.9E-06 52.0 4.8 35 46-80 183-217 (381)
323 3pid_A UDP-glucose 6-dehydroge 93.7 0.06 2E-06 52.9 5.1 35 45-80 34-68 (432)
324 3oc4_A Oxidoreductase, pyridin 93.7 0.071 2.4E-06 53.3 5.8 58 47-107 147-205 (452)
325 2q7v_A Thioredoxin reductase; 93.7 0.059 2E-06 51.1 4.9 36 47-82 152-187 (325)
326 3mog_A Probable 3-hydroxybutyr 93.7 0.068 2.3E-06 53.6 5.5 34 47-80 5-38 (483)
327 3ego_A Probable 2-dehydropanto 93.6 0.07 2.4E-06 50.2 5.2 32 48-80 3-34 (307)
328 3dtt_A NADP oxidoreductase; st 93.6 0.079 2.7E-06 48.0 5.3 36 45-80 17-52 (245)
329 2a9f_A Putative malic enzyme ( 93.5 0.065 2.2E-06 51.3 4.8 36 45-80 186-222 (398)
330 2gv8_A Monooxygenase; FMO, FAD 93.5 0.062 2.1E-06 53.6 5.0 36 47-82 212-248 (447)
331 1zej_A HBD-9, 3-hydroxyacyl-CO 93.5 0.077 2.6E-06 49.3 5.2 33 47-80 12-44 (293)
332 2o3j_A UDP-glucose 6-dehydroge 93.5 0.061 2.1E-06 54.1 4.9 34 47-80 9-44 (481)
333 3qha_A Putative oxidoreductase 93.5 0.05 1.7E-06 50.9 4.0 34 47-80 15-48 (296)
334 2wpf_A Trypanothione reductase 93.5 0.065 2.2E-06 54.3 5.1 58 47-107 191-251 (495)
335 4dll_A 2-hydroxy-3-oxopropiona 93.4 0.075 2.6E-06 50.3 5.1 35 46-80 30-64 (320)
336 3lad_A Dihydrolipoamide dehydr 93.4 0.1 3.4E-06 52.6 6.3 59 46-107 179-237 (476)
337 1fec_A Trypanothione reductase 93.3 0.072 2.5E-06 53.9 5.1 58 47-107 187-247 (490)
338 3hwr_A 2-dehydropantoate 2-red 93.3 0.085 2.9E-06 49.9 5.2 33 46-79 18-50 (318)
339 1mo9_A ORF3; nucleotide bindin 93.2 0.089 3E-06 53.7 5.7 58 48-108 215-272 (523)
340 1vl6_A Malate oxidoreductase; 93.2 0.079 2.7E-06 50.7 4.8 35 45-79 190-225 (388)
341 3itj_A Thioredoxin reductase 1 93.2 0.078 2.7E-06 50.4 4.9 36 47-82 173-208 (338)
342 2vns_A Metalloreductase steap3 93.2 0.095 3.2E-06 46.4 5.1 33 47-79 28-60 (215)
343 3ics_A Coenzyme A-disulfide re 93.2 0.11 3.8E-06 53.8 6.4 58 47-107 187-244 (588)
344 2v6b_A L-LDH, L-lactate dehydr 93.1 0.094 3.2E-06 49.2 5.2 32 48-79 1-34 (304)
345 3pef_A 6-phosphogluconate dehy 93.1 0.094 3.2E-06 48.8 5.2 33 48-80 2-34 (287)
346 4g65_A TRK system potassium up 93.0 0.042 1.4E-06 54.9 2.8 34 47-80 3-36 (461)
347 2vdc_G Glutamate synthase [NAD 93.0 0.11 3.9E-06 51.8 5.9 37 46-82 263-300 (456)
348 1evy_A Glycerol-3-phosphate de 93.0 0.062 2.1E-06 52.0 3.9 31 49-79 17-47 (366)
349 3pqe_A L-LDH, L-lactate dehydr 93.0 0.1 3.5E-06 49.3 5.2 34 46-79 4-39 (326)
350 1z82_A Glycerol-3-phosphate de 93.0 0.1 3.5E-06 49.8 5.4 33 47-79 14-46 (335)
351 1mv8_A GMD, GDP-mannose 6-dehy 93.0 0.078 2.7E-06 52.7 4.7 33 48-80 1-33 (436)
352 1xdi_A RV3303C-LPDA; reductase 92.9 0.11 3.6E-06 52.8 5.7 58 47-107 182-239 (499)
353 2izz_A Pyrroline-5-carboxylate 92.9 0.1 3.5E-06 49.4 5.1 36 45-80 20-59 (322)
354 3ktd_A Prephenate dehydrogenas 92.8 0.13 4.4E-06 49.0 5.7 35 46-80 7-41 (341)
355 2pv7_A T-protein [includes: ch 92.8 0.15 5.2E-06 47.6 6.1 34 47-80 21-55 (298)
356 1hyu_A AHPF, alkyl hydroperoxi 92.7 0.088 3E-06 53.7 4.7 36 47-82 355-390 (521)
357 1x13_A NAD(P) transhydrogenase 92.6 0.12 4.2E-06 50.5 5.4 34 47-80 172-205 (401)
358 3dfu_A Uncharacterized protein 92.6 0.044 1.5E-06 48.8 2.0 34 46-79 5-38 (232)
359 4a7p_A UDP-glucose dehydrogena 92.6 0.14 4.8E-06 50.7 5.8 35 47-81 8-42 (446)
360 3c24_A Putative oxidoreductase 92.5 0.15 5.3E-06 47.2 5.8 33 47-79 11-44 (286)
361 3l9w_A Glutathione-regulated p 92.5 0.12 4.2E-06 50.6 5.2 34 47-80 4-37 (413)
362 3gvi_A Malate dehydrogenase; N 92.5 0.15 5.1E-06 48.1 5.6 34 47-80 7-41 (324)
363 3qsg_A NAD-binding phosphogluc 92.5 0.11 3.7E-06 49.0 4.6 34 46-79 23-57 (312)
364 1guz_A Malate dehydrogenase; o 92.4 0.14 4.7E-06 48.2 5.3 33 48-80 1-35 (310)
365 3iwa_A FAD-dependent pyridine 92.4 0.13 4.3E-06 51.8 5.4 58 47-107 159-218 (472)
366 3pdu_A 3-hydroxyisobutyrate de 92.4 0.087 3E-06 49.0 3.9 33 48-80 2-34 (287)
367 3ggo_A Prephenate dehydrogenas 92.3 0.18 6.2E-06 47.5 6.0 34 47-80 33-68 (314)
368 1nyt_A Shikimate 5-dehydrogena 92.3 0.16 5.5E-06 46.7 5.5 33 47-79 119-151 (271)
369 1ur5_A Malate dehydrogenase; o 92.3 0.16 5.3E-06 47.8 5.5 33 48-80 3-36 (309)
370 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.058 2E-06 44.2 2.2 33 47-79 21-53 (144)
371 1l7d_A Nicotinamide nucleotide 92.2 0.16 5.4E-06 49.4 5.7 35 46-80 171-205 (384)
372 2h78_A Hibadh, 3-hydroxyisobut 92.2 0.12 4.2E-06 48.4 4.7 34 47-80 3-36 (302)
373 1txg_A Glycerol-3-phosphate de 92.2 0.11 3.9E-06 49.4 4.6 31 48-78 1-31 (335)
374 3p7m_A Malate dehydrogenase; p 92.2 0.18 6.1E-06 47.6 5.8 34 47-80 5-39 (321)
375 3phh_A Shikimate dehydrogenase 92.1 0.18 6.1E-06 46.1 5.5 34 47-80 118-151 (269)
376 1jw9_B Molybdopterin biosynthe 92.1 0.13 4.6E-06 46.6 4.7 32 48-79 32-64 (249)
377 3o0h_A Glutathione reductase; 92.1 0.16 5.4E-06 51.3 5.7 59 46-107 190-248 (484)
378 4dna_A Probable glutathione re 92.1 0.16 5.5E-06 50.9 5.7 60 46-108 169-228 (463)
379 3r9u_A Thioredoxin reductase; 92.1 0.15 5.3E-06 47.7 5.3 36 47-82 147-182 (315)
380 1jay_A Coenzyme F420H2:NADP+ o 92.0 0.15 5.2E-06 44.8 4.8 31 49-79 2-33 (212)
381 1dlj_A UDP-glucose dehydrogena 92.0 0.11 3.9E-06 50.8 4.3 32 48-80 1-32 (402)
382 4ffl_A PYLC; amino acid, biosy 91.9 0.17 5.8E-06 48.8 5.4 35 47-81 1-35 (363)
383 1pjc_A Protein (L-alanine dehy 91.9 0.18 6E-06 48.6 5.5 33 48-80 168-200 (361)
384 2wtb_A MFP2, fatty acid multif 91.9 0.16 5.6E-06 53.7 5.6 34 47-80 312-345 (725)
385 2q3e_A UDP-glucose 6-dehydroge 91.9 0.13 4.4E-06 51.6 4.6 33 48-80 6-40 (467)
386 3dgh_A TRXR-1, thioredoxin red 91.7 0.2 6.8E-06 50.5 5.9 58 46-107 186-243 (483)
387 4ezb_A Uncharacterized conserv 91.7 0.15 5.1E-06 48.2 4.6 34 47-80 24-58 (317)
388 4gwg_A 6-phosphogluconate dehy 91.7 0.19 6.5E-06 50.2 5.5 35 46-80 3-37 (484)
389 1a5z_A L-lactate dehydrogenase 91.6 0.16 5.3E-06 48.1 4.7 32 48-79 1-34 (319)
390 1hyh_A L-hicdh, L-2-hydroxyiso 91.6 0.16 5.5E-06 47.7 4.7 32 48-79 2-35 (309)
391 1cjc_A Protein (adrenodoxin re 91.5 0.17 6E-06 50.5 5.2 36 47-82 145-201 (460)
392 2eez_A Alanine dehydrogenase; 91.4 0.21 7.1E-06 48.3 5.5 34 47-80 166-199 (369)
393 3gpi_A NAD-dependent epimerase 91.4 0.23 7.8E-06 46.0 5.5 34 47-80 3-36 (286)
394 2rcy_A Pyrroline carboxylate r 91.3 0.2 6.7E-06 45.8 4.9 34 47-80 4-41 (262)
395 3ldh_A Lactate dehydrogenase; 91.2 0.32 1.1E-05 45.8 6.3 34 46-79 20-55 (330)
396 3cky_A 2-hydroxymethyl glutara 91.2 0.18 6.2E-06 47.2 4.7 33 47-79 4-36 (301)
397 3e8x_A Putative NAD-dependent 91.2 0.22 7.6E-06 44.5 5.1 35 46-80 20-55 (236)
398 2f1k_A Prephenate dehydrogenas 91.2 0.23 7.9E-06 45.8 5.3 32 48-79 1-32 (279)
399 1p77_A Shikimate 5-dehydrogena 91.1 0.18 6E-06 46.5 4.4 33 47-79 119-151 (272)
400 1x0v_A GPD-C, GPDH-C, glycerol 91.1 0.13 4.3E-06 49.6 3.5 35 47-81 8-49 (354)
401 3d1l_A Putative NADP oxidoredu 91.1 0.17 5.9E-06 46.3 4.3 34 47-80 10-44 (266)
402 1oju_A MDH, malate dehydrogena 91.1 0.19 6.6E-06 46.6 4.6 33 48-80 1-35 (294)
403 3ius_A Uncharacterized conserv 91.1 0.17 5.9E-06 46.8 4.4 34 47-80 5-38 (286)
404 3nep_X Malate dehydrogenase; h 91.0 0.21 7.1E-06 46.9 4.8 33 48-80 1-35 (314)
405 2egg_A AROE, shikimate 5-dehyd 91.0 0.24 8.1E-06 46.2 5.2 33 47-79 141-174 (297)
406 1pjq_A CYSG, siroheme synthase 91.0 0.2 6.8E-06 49.9 4.9 33 47-79 12-44 (457)
407 1yqg_A Pyrroline-5-carboxylate 90.9 0.21 7.1E-06 45.6 4.7 32 48-79 1-33 (263)
408 3nlc_A Uncharacterized protein 90.9 0.59 2E-05 47.6 8.3 41 45-85 105-145 (549)
409 1wdk_A Fatty oxidation complex 90.8 0.22 7.5E-06 52.7 5.3 35 46-80 313-347 (715)
410 3ew7_A LMO0794 protein; Q8Y8U8 90.8 0.28 9.5E-06 43.2 5.3 33 48-80 1-34 (221)
411 2qrj_A Saccharopine dehydrogen 90.8 0.19 6.5E-06 48.3 4.3 41 46-86 213-258 (394)
412 3vps_A TUNA, NAD-dependent epi 90.8 0.26 9E-06 46.3 5.4 36 46-81 6-42 (321)
413 2g5c_A Prephenate dehydrogenas 90.7 0.28 9.6E-06 45.3 5.4 32 48-79 2-35 (281)
414 4aj2_A L-lactate dehydrogenase 90.7 0.32 1.1E-05 46.0 5.8 34 46-79 18-53 (331)
415 1yj8_A Glycerol-3-phosphate de 90.7 0.18 6.3E-06 48.8 4.3 34 48-81 22-62 (375)
416 3fbs_A Oxidoreductase; structu 90.7 0.17 5.9E-06 46.9 4.0 33 47-80 141-173 (297)
417 2vhw_A Alanine dehydrogenase; 90.6 0.28 9.5E-06 47.5 5.5 35 46-80 167-201 (377)
418 3zwc_A Peroxisomal bifunctiona 90.6 0.33 1.1E-05 51.2 6.4 36 45-80 314-349 (742)
419 2zyd_A 6-phosphogluconate dehy 90.5 0.23 8E-06 49.7 4.9 35 46-80 14-48 (480)
420 2gf2_A Hibadh, 3-hydroxyisobut 90.4 0.24 8.2E-06 46.2 4.7 32 49-80 2-33 (296)
421 3k31_A Enoyl-(acyl-carrier-pro 90.3 0.36 1.2E-05 45.0 5.8 37 44-80 27-66 (296)
422 3h2s_A Putative NADH-flavin re 90.3 0.31 1.1E-05 43.0 5.2 32 48-79 1-33 (224)
423 3tri_A Pyrroline-5-carboxylate 90.3 0.34 1.2E-05 44.7 5.6 34 47-80 3-39 (280)
424 3dhn_A NAD-dependent epimerase 90.3 0.24 8.3E-06 43.9 4.4 34 47-80 4-38 (227)
425 2pgd_A 6-phosphogluconate dehy 90.2 0.3 1E-05 49.0 5.5 33 48-80 3-35 (482)
426 2aef_A Calcium-gated potassium 90.2 0.11 3.8E-06 46.6 2.1 34 46-80 8-41 (234)
427 1hdo_A Biliverdin IX beta redu 90.2 0.36 1.2E-05 41.8 5.5 33 48-80 4-37 (206)
428 3d0o_A L-LDH 1, L-lactate dehy 90.2 0.3 1E-05 46.0 5.1 34 46-79 5-40 (317)
429 1ldn_A L-lactate dehydrogenase 90.2 0.32 1.1E-05 45.8 5.3 34 46-79 5-40 (316)
430 1edz_A 5,10-methylenetetrahydr 90.1 0.25 8.7E-06 46.1 4.5 34 46-79 176-210 (320)
431 3orq_A N5-carboxyaminoimidazol 90.1 0.47 1.6E-05 45.9 6.7 38 44-81 9-46 (377)
432 3fi9_A Malate dehydrogenase; s 90.1 0.36 1.2E-05 45.8 5.6 34 46-79 7-43 (343)
433 3gt0_A Pyrroline-5-carboxylate 90.1 0.36 1.2E-05 43.6 5.4 33 48-80 3-39 (247)
434 3c7a_A Octopine dehydrogenase; 90.1 0.17 5.9E-06 49.6 3.5 31 48-78 3-34 (404)
435 3vku_A L-LDH, L-lactate dehydr 90.1 0.31 1.1E-05 45.9 5.1 34 46-79 8-43 (326)
436 1vpd_A Tartronate semialdehyde 90.1 0.26 9E-06 46.0 4.7 32 48-79 6-37 (299)
437 2hk9_A Shikimate dehydrogenase 90.0 0.28 9.6E-06 45.2 4.7 33 47-79 129-161 (275)
438 2cvz_A Dehydrogenase, 3-hydrox 90.0 0.23 8E-06 46.0 4.2 32 48-80 2-33 (289)
439 3kvo_A Hydroxysteroid dehydrog 89.9 0.44 1.5E-05 45.5 6.2 36 46-81 44-80 (346)
440 3don_A Shikimate dehydrogenase 89.9 0.28 9.6E-06 45.1 4.5 34 47-80 117-151 (277)
441 1o94_A Tmadh, trimethylamine d 89.9 0.28 9.5E-06 52.2 5.1 36 47-83 528-565 (729)
442 2rir_A Dipicolinate synthase, 89.8 0.37 1.3E-05 45.0 5.4 34 46-79 156-189 (300)
443 3ojo_A CAP5O; rossmann fold, c 89.8 0.26 9.1E-06 48.4 4.5 33 48-80 12-44 (431)
444 3pwz_A Shikimate dehydrogenase 89.8 0.41 1.4E-05 43.8 5.6 34 46-79 119-153 (272)
445 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.8 0.32 1.1E-05 48.8 5.2 32 48-79 2-33 (478)
446 3jyo_A Quinate/shikimate dehyd 89.8 0.4 1.4E-05 44.2 5.5 34 46-79 126-160 (283)
447 3tnl_A Shikimate dehydrogenase 89.7 0.38 1.3E-05 45.0 5.4 34 46-79 153-187 (315)
448 2p4q_A 6-phosphogluconate dehy 89.7 0.36 1.2E-05 48.5 5.6 33 48-80 11-43 (497)
449 2ahr_A Putative pyrroline carb 89.7 0.29 9.9E-06 44.6 4.5 32 48-79 4-35 (259)
450 1kdg_A CDH, cellobiose dehydro 89.7 0.73 2.5E-05 47.2 8.0 38 45-82 5-42 (546)
451 4a9w_A Monooxygenase; baeyer-v 89.6 0.28 9.7E-06 46.8 4.6 33 46-79 162-194 (357)
452 3rui_A Ubiquitin-like modifier 89.6 0.4 1.4E-05 45.2 5.4 33 47-79 34-67 (340)
453 1yb4_A Tartronic semialdehyde 89.5 0.21 7.3E-06 46.5 3.6 32 48-80 4-35 (295)
454 3d4o_A Dipicolinate synthase s 89.5 0.41 1.4E-05 44.6 5.4 34 46-79 154-187 (293)
455 3ond_A Adenosylhomocysteinase; 89.4 0.41 1.4E-05 47.5 5.5 35 46-80 264-298 (488)
456 3u62_A Shikimate dehydrogenase 89.4 0.39 1.3E-05 43.5 5.0 32 49-80 110-142 (253)
457 3r6d_A NAD-dependent epimerase 89.4 0.51 1.8E-05 41.6 5.8 33 48-80 6-40 (221)
458 4gbj_A 6-phosphogluconate dehy 89.4 0.28 9.5E-06 45.8 4.1 33 48-80 6-38 (297)
459 3fbt_A Chorismate mutase and s 89.3 0.37 1.3E-05 44.3 4.9 34 46-79 121-155 (282)
460 1i36_A Conserved hypothetical 89.3 0.35 1.2E-05 44.2 4.7 30 49-78 2-31 (264)
461 3qvo_A NMRA family protein; st 89.2 0.24 8.1E-06 44.4 3.5 36 45-80 21-58 (236)
462 4e4t_A Phosphoribosylaminoimid 89.2 0.55 1.9E-05 46.2 6.3 38 43-80 31-68 (419)
463 3h8v_A Ubiquitin-like modifier 89.1 0.36 1.2E-05 44.6 4.6 33 47-79 36-69 (292)
464 2r6j_A Eugenol synthase 1; phe 89.0 0.39 1.3E-05 45.2 5.0 34 47-80 11-45 (318)
465 1y1p_A ARII, aldehyde reductas 89.0 0.59 2E-05 44.3 6.4 35 45-79 9-44 (342)
466 1zud_1 Adenylyltransferase THI 88.9 0.4 1.4E-05 43.4 4.8 33 47-79 28-61 (251)
467 1gte_A Dihydropyrimidine dehyd 88.8 0.37 1.3E-05 53.4 5.3 33 48-80 333-366 (1025)
468 1np3_A Ketol-acid reductoisome 88.8 0.48 1.6E-05 45.1 5.5 33 48-80 17-49 (338)
469 2iz1_A 6-phosphogluconate dehy 88.8 0.45 1.5E-05 47.6 5.5 33 47-79 5-37 (474)
470 2gag_A Heterotetrameric sarcos 88.8 0.2 6.9E-06 55.1 3.2 36 48-83 285-320 (965)
471 4b4o_A Epimerase family protei 88.8 0.52 1.8E-05 43.8 5.7 34 48-81 1-35 (298)
472 3o8q_A Shikimate 5-dehydrogena 88.8 0.45 1.6E-05 43.8 5.1 34 46-79 125-159 (281)
473 3d3w_A L-xylulose reductase; u 88.8 0.65 2.2E-05 41.6 6.2 34 46-79 6-40 (244)
474 1nvt_A Shikimate 5'-dehydrogen 88.8 0.35 1.2E-05 44.8 4.4 32 47-79 128-159 (287)
475 1leh_A Leucine dehydrogenase; 88.8 0.51 1.7E-05 45.2 5.5 34 46-79 172-205 (364)
476 4id9_A Short-chain dehydrogena 88.7 0.42 1.5E-05 45.5 5.1 37 45-81 17-54 (347)
477 2pzm_A Putative nucleotide sug 88.7 0.47 1.6E-05 44.9 5.4 36 45-80 18-54 (330)
478 1lqt_A FPRA; NADP+ derivative, 88.6 0.4 1.4E-05 47.8 5.0 36 47-82 147-203 (456)
479 1w4x_A Phenylacetone monooxyge 88.5 0.37 1.3E-05 49.3 4.8 37 46-82 185-221 (542)
480 3t4e_A Quinate/shikimate dehyd 88.5 0.53 1.8E-05 44.0 5.4 34 46-79 147-181 (312)
481 1ez4_A Lactate dehydrogenase; 88.4 0.46 1.6E-05 44.7 5.0 33 47-79 5-39 (318)
482 2x0j_A Malate dehydrogenase; o 88.4 0.4 1.4E-05 44.4 4.4 32 48-79 1-34 (294)
483 1cyd_A Carbonyl reductase; sho 88.3 0.67 2.3E-05 41.5 5.9 34 46-79 6-40 (244)
484 4hv4_A UDP-N-acetylmuramate--L 88.2 0.34 1.2E-05 48.8 4.2 35 46-80 21-56 (494)
485 3i6i_A Putative leucoanthocyan 88.1 0.5 1.7E-05 45.0 5.2 34 47-80 10-44 (346)
486 1y56_A Hypothetical protein PH 88.1 0.35 1.2E-05 48.8 4.2 55 254-311 263-318 (493)
487 1b8p_A Protein (malate dehydro 88.0 0.38 1.3E-05 45.6 4.1 34 46-79 4-45 (329)
488 3sxp_A ADP-L-glycero-D-mannohe 87.9 0.85 2.9E-05 43.7 6.7 39 43-81 6-47 (362)
489 3b1f_A Putative prephenate deh 87.9 0.47 1.6E-05 44.0 4.7 33 47-79 6-40 (290)
490 1smk_A Malate dehydrogenase, g 87.9 0.35 1.2E-05 45.7 3.8 34 47-80 8-44 (326)
491 2d5c_A AROE, shikimate 5-dehyd 87.8 0.56 1.9E-05 42.8 5.1 31 49-79 118-148 (263)
492 2zqz_A L-LDH, L-lactate dehydr 87.8 0.58 2E-05 44.1 5.3 34 46-79 8-43 (326)
493 1mld_A Malate dehydrogenase; o 87.8 0.41 1.4E-05 45.0 4.2 33 48-80 1-36 (314)
494 3k30_A Histamine dehydrogenase 87.8 0.51 1.8E-05 49.8 5.4 38 46-83 522-561 (690)
495 4g6h_A Rotenone-insensitive NA 87.7 0.38 1.3E-05 48.6 4.2 57 49-108 219-289 (502)
496 1lu9_A Methylene tetrahydromet 87.7 0.63 2.2E-05 43.1 5.4 33 47-79 119-152 (287)
497 3gvp_A Adenosylhomocysteinase 87.6 0.54 1.9E-05 45.7 5.0 35 46-80 219-253 (435)
498 2dbq_A Glyoxylate reductase; D 87.6 1.1 3.7E-05 42.5 7.0 35 46-80 149-183 (334)
499 1npy_A Hypothetical shikimate 87.6 0.57 2E-05 42.9 4.9 33 47-79 119-152 (271)
500 2dvm_A Malic enzyme, 439AA lon 87.3 0.55 1.9E-05 46.0 4.9 31 47-77 186-219 (439)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=5.6e-36 Score=303.53 Aligned_cols=404 Identities=14% Similarity=0.111 Sum_probs=271.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----ccccc-----------ccccHHHHHHHhCCCCCCCc
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFWY-----------PFRNIFSLVDELGIKPFTGW 112 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~~-----------~~~~~~~~~~~lg~~~~~~~ 112 (530)
+||+|||||++||+||++|+++|++|+|||+++++||+.. .|+.. ....+.++++++|+......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 5899999999999999999999999999999999999943 23321 23357889999998632211
Q ss_pred c-ccee-eccCCcccccccccCCCCCCCcccchhhhhc-cCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHH
Q 009646 113 M-KSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF-SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 189 (530)
Q Consensus 113 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 189 (530)
. .... +..++... ..........+... ..++..+.......... ... ...+..++.+|++
T Consensus 81 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~s~~~~l~ 143 (425)
T 3ka7_A 81 SEMTTVRVPLKKGNP---------DYVKGFKDISFNDFPSLLSYKDRMKIALLIVS---TRK-----NRPSGSSLQAWIK 143 (425)
T ss_dssp CCCCEEEEESSTTCC---------SSTTCEEEEEGGGGGGGSCHHHHHHHHHHHHH---TTT-----SCCCSSBHHHHHH
T ss_pred cCCceEEeecCCCcc---------cccccccceehhhhhhhCCHHHHHHHHHHHHh---hhh-----cCCCCCCHHHHHH
Confidence 1 1111 11000000 00000000001111 11222222221111111 000 1124678999999
Q ss_pred HhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhcCcceeEeecCCCcchhHHHHHHHHHhcCCEEEcCc
Q 009646 190 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGR 269 (530)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~ 269 (530)
+. +.++..+.++.++....++.+++++++......+...... . ...++.||+ ..++++|.+.++++|++|++++
T Consensus 144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~---~~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~ 217 (425)
T 3ka7_A 144 SQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRF-G---GTGIPEGGC-KGIIDALETVISANGGKIHTGQ 217 (425)
T ss_dssp HH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH-C---SCEEETTSH-HHHHHHHHHHHHHTTCEEECSC
T ss_pred Hh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhc-C---CccccCCCH-HHHHHHHHHHHHHcCCEEEECC
Confidence 86 5667778888888877788899999998766666554321 1 235677774 6799999999999999999999
Q ss_pred eeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhcccc--ChHHHHhhccccceeEEEEEEEeccCCCCC
Q 009646 270 RVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILC--NREEFLKVLNLASIDVVSVKLWFDKKVTVP 347 (530)
Q Consensus 270 ~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~--~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 347 (530)
+|++|..++ +++++|.++++++.||.||+|+|++.+.+|+++.+.. .....+++..+.+.+..+++++++++..
T Consensus 218 ~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-- 293 (425)
T 3ka7_A 218 EVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV-- 293 (425)
T ss_dssp CEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--
T ss_pred ceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc--
Confidence 999999887 7777788888899999999999999999998754211 2334556677777788889999998864
Q ss_pred CCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEe
Q 009646 348 NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRR 427 (530)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~ 427 (530)
..+.++...+...-..+...+..++.+.+++++++.+.++......+. .++.++.++++|+++||+.. .....+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~~---~~~~~v~~ 369 (425)
T 3ka7_A 294 GHTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGKR---YEVLLIQS 369 (425)
T ss_dssp CSSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTCC---EEEEEEEE
T ss_pred CcCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCCc---eEEEEEEE
Confidence 233333332211111233345556677777888876655433222122 34567999999999999732 33336778
Q ss_pred CCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHH
Q 009646 428 FPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 484 (530)
Q Consensus 428 ~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il 484 (530)
|+.++|.+.+|.. .++...+|++|||+||||+.+..+ .+|++|+.||++||++|+
T Consensus 370 ~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg-~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 370 YHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGG-IEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTC-CHHHHHHHHHHHHHHC--
T ss_pred ECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCC-CccHHHHHHHHHHHHHhh
Confidence 9999999998854 456777889999999999998666 689999999999999987
No 2
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=4.2e-33 Score=281.72 Aligned_cols=397 Identities=15% Similarity=0.125 Sum_probs=253.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----ccccc-----------ccccHHHHHHHhCCCCCC-C
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFWY-----------PFRNIFSLVDELGIKPFT-G 111 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~~-----------~~~~~~~~~~~lg~~~~~-~ 111 (530)
+||+|||||++||+||++|+++|++|+||||++++||+.. +|+.. ....+.++++++|+.... .
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 5899999999999999999999999999999999999943 33331 133577889999886221 1
Q ss_pred cccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHHHh
Q 009646 112 WMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQF 191 (530)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 191 (530)
......+..++.....+ . ....++..+.............. ....+..++.+|+.+.
T Consensus 81 ~~~~~~~~~~g~~~~~~---------~--------~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~s~~~~l~~~ 137 (421)
T 3nrn_A 81 SNPKGKILWEGKIFHYR---------E--------SWKFLSVKEKAKALKLLAEIRMN------KLPKEEIPADEWIKEK 137 (421)
T ss_dssp CSSSCEEEETTEEEEGG---------G--------GGGGCC--------CCHHHHHTT------CCCCCCSBHHHHHHHH
T ss_pred CCCCeEEEECCEEEEcC---------C--------chhhCCHhHHHHHHHHHHHHHhc------cCCCCCCCHHHHHHHh
Confidence 11111111122111110 0 00111111111111111111100 1112347899999998
Q ss_pred CCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhcCcceeEeecCCCcchhHHHHHHHHHhcCCEEEcCcee
Q 009646 192 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRV 271 (530)
Q Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V 271 (530)
+++++..+.++.++....++.++.++++......+...... . ...++.+| ...+++.|.+.++++|++|+++++|
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---g~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 138 IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRW-G---GPGLIRGG-CKAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH-C---SCEEETTC-HHHHHHHHHHHHHTTTCEEESSCCE
T ss_pred cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhc-C---CcceecCC-HHHHHHHHHHHHHHCCCEEEcCCeE
Confidence 78888888888898888888999999998776666554321 1 23567777 4679999999999999999999999
Q ss_pred eEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEeccCCCCCCCCc
Q 009646 272 TDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSN 351 (530)
Q Consensus 272 ~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~ 351 (530)
++|..++ +++ |.++++++.||.||+|+|++.+.+|++....+ ....+++..+.+.+..++++.++++.. ..++
T Consensus 213 ~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~v~l~~~~~~~--~~~~ 285 (421)
T 3nrn_A 213 VEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFD-RDYLKQVDSIEPSEGIKFNLAVPGEPR--IGNT 285 (421)
T ss_dssp EEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSC-HHHHHHHHTCCCCCEEEEEEEEESSCS--SCSS
T ss_pred EEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCC-HHHHHHHhCCCCCceEEEEEEEcCCcc--cCCe
Confidence 9999876 665 66777899999999999999999998743222 233455677777788889999998742 2334
Q ss_pred eeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCCC
Q 009646 352 ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS 431 (530)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a 431 (530)
+++..+... ..+...+...+...+.+++++.+..+.+. .++++.++.++++|++++|. ..+. .+.+|..+
T Consensus 286 ~~~~~~~~~-~~i~~~s~~~p~~ap~G~~~~~~~~~~~~----~~~~~~~~~~~~~L~~~~p~---~~~~--~~~~~~~~ 355 (421)
T 3nrn_A 286 IVFTPGLMI-NGFNEPSALDKSLAREGYTLIMAHMALKN----GNVKKAIEKGWEELLEIFPE---GEPL--LAQVYRDG 355 (421)
T ss_dssp EEECTTSSS-CEEECGGGTCGGGSCTTEEEEEEEEECTT----CCHHHHHHHHHHHHHHHCTT---CEEE--EEEEC---
T ss_pred EEEcCCcce-eeEeccCCCCCCcCCCCceEEEEEEeecc----ccHHHHHHHHHHHHHHHcCC---CeEE--EeeeccCC
Confidence 444333221 11222344445556666777666554332 33456689999999999982 2232 34557777
Q ss_pred ceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhCCCCcccccc
Q 009646 432 LTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIP 497 (530)
Q Consensus 432 ~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~~~~~~~~~~ 497 (530)
++.+.+......+ .++ +|||+||||+.++.+ .+||+|+.||++||++| +.++..+-+-
T Consensus 356 ~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~~g-~~~~ga~~sg~~aA~~l----~~~~~~~~~~ 413 (421)
T 3nrn_A 356 NPVNRTRAGLHIE--WPL-NEVLVVGDGYRPPGG-IEVDGIALGVMKALEKL----NLGSFSEWYL 413 (421)
T ss_dssp ----------CCC--CCC-SSEEECSTTCCCTTC-CHHHHHHHHHHHHHHHT----TSCCCCTTTC
T ss_pred CCcccccCCCCCC--CCC-CcEEEECCcccCCCc-eeeehHHHHHHHHHHHh----CcCchhhhhh
Confidence 7766433211223 567 999999999986544 46799999999999999 4446665544
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=4.3e-33 Score=289.24 Aligned_cols=427 Identities=19% Similarity=0.167 Sum_probs=266.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----c-cccc---------ccccHHHHHHHhCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----I-SFWY---------PFRNIFSLVDELGIKPFTG 111 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~-g~~~---------~~~~~~~~~~~lg~~~~~~ 111 (530)
.++||||||||++||+||+.|+++|++|+|||+++++||++. . |+.. .+..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 357999999999999999999999999999999999999953 1 3321 2456888999999874332
Q ss_pred cccc-eeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcc-----hhhhcccCccHH
Q 009646 112 WMKS-AQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTD-----VAWRKYDSITAR 185 (530)
Q Consensus 112 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~ 185 (530)
.... ..+..++.....+ ..++......... +.......+.......... .....++..++.
T Consensus 83 ~~~~~~~~~~~g~~~~~~-----~~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 149 (520)
T 1s3e_A 83 NEVERLIHHVKGKSYPFR-----GPFPPVWNPITYL--------DHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMK 149 (520)
T ss_dssp CCSSEEEEEETTEEEEEC-----SSSCCCCSHHHHH--------HHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHH
T ss_pred ccCCceEEEECCEEEEec-----CCCCCCCCHHHHH--------HHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHH
Confidence 2211 2222222211100 0011100000000 0000000011111000000 111235678999
Q ss_pred HHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHH-----HhhcCcceeEeecCCCcchhHHHHHHHHHh
Q 009646 186 ELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII-----LAHQKNFDLVWCRGTLREKIFEPWMDSMRT 260 (530)
Q Consensus 186 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~-----~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~ 260 (530)
+|+++.+.++. .+.++.+++...++.++.++++..++..+.... ...........+.||+ ..+++++.+.+
T Consensus 150 ~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l-- 225 (520)
T 1s3e_A 150 ELLDKLCWTES-AKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS-GQVSERIMDLL-- 225 (520)
T ss_dssp HHHHHHCSSHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT-HHHHHHHHHHH--
T ss_pred HHHHhhCCCHH-HHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH-HHHHHHHHHHc--
Confidence 99999876655 577888888788888999999876543332110 0000112234556664 56877777544
Q ss_pred cCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEE
Q 009646 261 RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLW 339 (530)
Q Consensus 261 ~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~ 339 (530)
|++|++|++|++|..++ +.+. |.+. ++++.||+||+|+|+..+.+++.+++++ ....+.++.+.+.+..++++.
T Consensus 226 -g~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~ 300 (520)
T 1s3e_A 226 -GDRVKLERPVIYIDQTR--ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLGSVIKCIVY 300 (520)
T ss_dssp -GGGEESSCCEEEEECSS--SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBCCEEEEEEE
T ss_pred -CCcEEcCCeeEEEEECC--CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCcceEEEEEE
Confidence 78999999999999876 5554 5554 5689999999999999998887665443 234456788888899999999
Q ss_pred eccCCCCCCCC-ceee--ccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhHhhcC
Q 009646 340 FDKKVTVPNVS-NACS--GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKD 414 (530)
Q Consensus 340 ~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eei~~~~l~~L~~~~p~ 414 (530)
|++++|..... +... ....... ..++.+. .+....++...+.. +..+..++++++.+.++++|+++||.
T Consensus 301 ~~~~~w~~~~~~g~~~~~~~~~~~~-~~~d~~~-----~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~ 374 (520)
T 1s3e_A 301 YKEPFWRKKDYCGTMIIDGEEAPVA-YTLDDTK-----PEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS 374 (520)
T ss_dssp CSSCGGGGGTEEEEEEECSTTCSCS-EEEECCC-----TTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTC
T ss_pred eCCCcccCCCCCceeeccCCCCceE-EEeeCCC-----CCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCc
Confidence 99998743321 1111 1111121 2333221 11122333222222 13456678999999999999999975
Q ss_pred CCCCccccceEEeCCC------Cce-ecCCCCcc-cCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHH
Q 009646 415 FSTATVMDHKIRRFPK------SLT-HFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 486 (530)
Q Consensus 415 ~~~~~i~~~~~~~~~~------a~~-~~~~g~~~-~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~ 486 (530)
.....+......+|.. ++. .+.||+.. .++...+|++||||||++++..++ ++||||+.||++||++|++.
T Consensus 375 ~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~-g~v~GAi~SG~~aA~~i~~~ 453 (520)
T 1s3e_A 375 LEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWS-GYMEGAVEAGERAAREILHA 453 (520)
T ss_dssp GGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCc-EEhHHHHHHHHHHHHHHHHH
Confidence 3112344455555532 222 35566532 234566788999999999987777 69999999999999999999
Q ss_pred hCCCCccccccCCCC
Q 009646 487 LGDGSFSKIIPVEED 501 (530)
Q Consensus 487 ~~~~~~~~~~~~~~~ 501 (530)
++...+.+++..+|.
T Consensus 454 l~~~~~~~~~~~~~~ 468 (520)
T 1s3e_A 454 MGKIPEDEIWQSEPE 468 (520)
T ss_dssp TTSSCGGGSSCCCCC
T ss_pred HhcCccccccccCCc
Confidence 988778888776654
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=281.19 Aligned_cols=407 Identities=15% Similarity=0.126 Sum_probs=264.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCCCCCCCcc-----cccccc------------cccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGNGFGSPDD-----ISFWYP------------FRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~~~~GG~~~-----~g~~~~------------~~~~~~~~~~lg~~ 107 (530)
++||+|||||++||+||++|+++|+ +|+|||+++++||++. +|++.+ +..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 3699999999999999999999999 9999999999999953 344422 33467899999987
Q ss_pred CCCCcc-------cceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhccc
Q 009646 108 PFTGWM-------KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYD 180 (530)
Q Consensus 108 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (530)
...... .......++.... ++..+.... .....+.. ......+ .++.. .....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~---------~p~~~~~~~-~~~~~~~~---~~~~~~~---~~~~~---~~~~~~ 142 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYVGGALHA---------LPTGLRGLL-RPSPPFSK---PLFWAGL---RELTK---PRGKEP 142 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEETTEEEE---------CCCSSCC----CCTTSCS---CSSHHHH---TTTTS---CCCCSS
T ss_pred ceeeecCCCCchhcceEEEECCEEEE---------CCCChhhcc-cccchhhh---HHHHHHH---Hhhhc---CCCCCC
Confidence 322111 0111112221111 111110000 00000000 0000000 01100 112235
Q ss_pred CccHHHHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhc--------------------------
Q 009646 181 SITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQ-------------------------- 234 (530)
Q Consensus 181 ~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~-------------------------- 234 (530)
+.++.+|+++ .++.++.+.++.+++...++.++.+++...+...+.......+
T Consensus 143 ~~s~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~ 221 (477)
T 3nks_A 143 DETVHSFAQR-RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALA 221 (477)
T ss_dssp CCBHHHHHHH-HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHH
T ss_pred CcCHHHHHHH-hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcc
Confidence 6789999998 4668888999999999999999999999876554443221111
Q ss_pred CcceeEeecCCCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhc
Q 009646 235 KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNS 314 (530)
Q Consensus 235 ~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~ 314 (530)
.......+.||+ ..+++.|.+.+.+.|++|+++++|++|+.++ +.++.|.++++++.||+||+|+|++.+.+++++.
T Consensus 222 ~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~--~~~~~v~~~~~~~~ad~vv~a~p~~~~~~ll~~~ 298 (477)
T 3nks_A 222 ERWSQWSLRGGL-EMLPQALETHLTSRGVSVLRGQPVCGLSLQA--EGRWKVSLRDSSLEADHVISAIPASVLSELLPAE 298 (477)
T ss_dssp TTCSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEECG--GGCEEEECSSCEEEESEEEECSCHHHHHHHSCGG
T ss_pred cCccEEEECCCH-HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CceEEEEECCeEEEcCEEEECCCHHHHHHhcccc
Confidence 112345667774 5799999999999999999999999999876 3334567777789999999999999999998764
Q ss_pred cccChHHHHhhccccceeEEEEEEEeccCCCCCCCCceeeccCCC---ccceeeeccccccccCCCCCeEEEEEecCC--
Q 009646 315 ILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDS---LAWTFFDLNKIYDEHKDDSATVIQADFYHA-- 389 (530)
Q Consensus 315 ~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 389 (530)
. ......+..+.+.++.++.+.|+++++.....+.+...... .++ .|+.........+++..++.+.+...
T Consensus 299 ~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~l~~~~gg~~~ 374 (477)
T 3nks_A 299 A---APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGI-VYDSVAFPEQDGSPPGLRVTVMLGGSWL 374 (477)
T ss_dssp G---HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEE-ECHHHHCGGGSTTTTCEEEEEEECHHHH
T ss_pred C---HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEE-EEeccccCCCCCCCCceEEEEEECCccc
Confidence 2 23445677888999999999999988743333222211111 122 34433211111122445543332211
Q ss_pred ----CCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCC----CCCCCceEEeecccc
Q 009646 390 ----NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG----FTSFPNLFMAGDWIT 461 (530)
Q Consensus 390 ----~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~----~~~~~~l~~aG~~~~ 461 (530)
+.....+++++++.++++|.++++.. ..+....+.+|+++++.+.+|+...+... ....++|++||+|+.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~--~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~ 452 (477)
T 3nks_A 375 QTLEASGCVLSQELFQQRAQEAAATQLGLK--EMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYE 452 (477)
T ss_dssp HHHHHSSCCCCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTS
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCC
Confidence 11124689999999999999999642 35667788899999999999975332211 112368999999984
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHH
Q 009646 462 TRHGSWSQERSYVTGLEAANRVVDY 486 (530)
Q Consensus 462 ~g~~~~~iega~~sG~~aA~~il~~ 486 (530)
| .+|++|+.||+++|++|++.
T Consensus 453 -G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 453 -G---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp -C---CSHHHHHHHHHHHHHHHHHC
T ss_pred -C---CcHHHHHHHHHHHHHHHHhc
Confidence 3 36999999999999999874
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1.9e-32 Score=281.39 Aligned_cols=411 Identities=17% Similarity=0.214 Sum_probs=254.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC------CeEEEEcCCCCCCCCcc----ccc---------ccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQG------FDVTVLDDGNGFGSPDD----ISF---------WYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G------~~V~vlE~~~~~GG~~~----~g~---------~~~~~~~~~~~~~lg~~ 107 (530)
++||+|||||++||+||++|+++| ++|+|||+++++||++. .|+ ...++++.++++++|++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCCc
Confidence 579999999999999999999999 99999999999999843 232 23366788999999998
Q ss_pred CCCCc--ccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHH
Q 009646 108 PFTGW--MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITAR 185 (530)
Q Consensus 108 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 185 (530)
..... ........++.....+. .....++..+.... ....++..++. ........ ......+..++.
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~p~~~~~~~--~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~s~~ 153 (470)
T 3i6d_A 85 HLLVNNATGQSYVLVNRTLHPMPK-GAVMGIPTKIAPFV--STGLFSLSGKA---RAAMDFIL-----PASKTKDDQSLG 153 (470)
T ss_dssp TTEEECCCCCEEEECSSCEEECCC------------------------CCSH---HHHHHHHS-----CCCSSSSCCBHH
T ss_pred ceeecCCCCccEEEECCEEEECCC-CcccCCcCchHHhh--ccCcCCHHHHH---HHhcCccc-----CCCCCCCCcCHH
Confidence 43321 11112222221111000 00001111111100 00001111111 11111111 011234678999
Q ss_pred HHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhh---------------------cCcceeEeecC
Q 009646 186 ELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH---------------------QKNFDLVWCRG 244 (530)
Q Consensus 186 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~---------------------~~~~~~~~~~g 244 (530)
+|+++. +..+..+.++.+++...+..++++++.......+..+.... ........+.+
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (470)
T 3i6d_A 154 EFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLST 232 (470)
T ss_dssp HHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETT
T ss_pred HHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCC
Confidence 999984 67888899999999999999999998865433221110000 00112334456
Q ss_pred CCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhhhhccccChHHHH
Q 009646 245 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFL 323 (530)
Q Consensus 245 g~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~ 323 (530)
|+ ..+++.|.+.+.+ ++|+++++|++|+.++ +.+ .|.++ |+++.||+||+|+|++.+.+++++++ ...
T Consensus 233 g~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~-----~~~ 301 (470)
T 3i6d_A 233 GL-QTLVEEIEKQLKL--TKVYKGTKVTKLSHSG--SCY-SLELDNGVTLDADSVIVTAPHKAAAGMLSELP-----AIS 301 (470)
T ss_dssp CT-HHHHHHHHHTCCS--EEEECSCCEEEEEECS--SSE-EEEESSSCEEEESEEEECSCHHHHHHHTTTST-----THH
T ss_pred hH-HHHHHHHHHhcCC--CEEEeCCceEEEEEcC--CeE-EEEECCCCEEECCEEEECCCHHHHHHHcCCch-----hhH
Confidence 54 4577777755433 7999999999999876 444 45665 55899999999999999999887642 235
Q ss_pred hhccccceeEEEEEEEeccCCCCCCCC--ceeeccCCCcc--ceeeeccccccccCCCCCeEEEEEecCC--CCCCCCCH
Q 009646 324 KVLNLASIDVVSVKLWFDKKVTVPNVS--NACSGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLKD 397 (530)
Q Consensus 324 ~~~~l~~~~~~~v~l~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 397 (530)
.+..+.+.++.++.+.|++++|..... +.+........ ...++. ...+...+.+..++.+.+... ..+...++
T Consensus 302 ~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s-~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~ 380 (470)
T 3i6d_A 302 HLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTN-KKWPHAAPEGKTLLRAYVGKAGDESIVDLSD 380 (470)
T ss_dssp HHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHH-HHCGGGSCTTCEEEEEEECCSSCCGGGTSCH
T ss_pred HHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEc-CcCCCcCCCCCEEEEEEECCCCCccccCCCH
Confidence 678888999999999999998743221 11211111110 012221 111222333444444433222 23557889
Q ss_pred HHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCccc----CCCCCCCCCceEEeeccccCCCCCCcchHHH
Q 009646 398 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGSWSQERSY 473 (530)
Q Consensus 398 eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~----~~~~~~~~~~l~~aG~~~~~g~~~~~iega~ 473 (530)
+++++.++++|.++||.. ..+....+.+|+++++.+.+|+... ++...++.+|||+||+++. | .+|++|+
T Consensus 381 ~~~~~~~~~~l~~~~g~~--~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~-g---~gv~~a~ 454 (470)
T 3i6d_A 381 NDIINIVLEDLKKVMNIN--GEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFE-G---VGIPDCI 454 (470)
T ss_dssp HHHHHHHHHHHGGGSCCC--SCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTS-C---CSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC--CCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCC-C---CCHHHHH
Confidence 999999999999999763 3566777889999999999986422 1222345689999999884 2 3699999
Q ss_pred HHHHHHHHHHHHHh
Q 009646 474 VTGLEAANRVVDYL 487 (530)
Q Consensus 474 ~sG~~aA~~il~~~ 487 (530)
.||+++|++|++.+
T Consensus 455 ~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 455 DQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999876
No 6
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=8.6e-32 Score=278.02 Aligned_cols=414 Identities=14% Similarity=0.095 Sum_probs=252.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----cccc---------cccccHHHHHHHhCCCCCCCcc
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFW---------YPFRNIFSLVDELGIKPFTGWM 113 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~---------~~~~~~~~~~~~lg~~~~~~~~ 113 (530)
.+||+|||||++||+||+.|+++|++|+|||+++++||++. .|+. ..++++.++++++|+.......
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~~ 118 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSPS 118 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEES
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcceeecc
Confidence 37999999999999999999999999999999999999943 2221 2357789999999984211110
Q ss_pred ------cceeeccC--CcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHH
Q 009646 114 ------KSAQYSEE--GLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITAR 185 (530)
Q Consensus 114 ------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 185 (530)
....+..+ +.....+. ......+... +..+..+.......... .... ......+..++..++.
T Consensus 119 ~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~s~~ 189 (495)
T 2vvm_A 119 FNFSRGVNHFQLRTNPTTSTYMTH----EAEDELLRSA-LHKFTNVDGTNGRTVLP---FPHD-MFYVPEFRKYDEMSYS 189 (495)
T ss_dssp CCCSSSCCEEEEESSTTCCEEECH----HHHHHHHHHH-HHHHHCSSSSTTTTTCS---CTTS-TTSSTTHHHHHTSBHH
T ss_pred cccCCCceEEEecCCCCceeecCH----HHHHHHHHHH-HHHHHccchhhhhhcCC---CCCC-cccCcchhhhhhhhHH
Confidence 11111111 11000000 0000000000 00000000000000000 0000 0001123445678999
Q ss_pred HHHHHhC--CCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHH---hhcCcceeEeecCCCcchhHHHHHHHHHh
Q 009646 186 ELFKQFG--CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL---AHQKNFDLVWCRGTLREKIFEPWMDSMRT 260 (530)
Q Consensus 186 ~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~---~~~~~~~~~~~~gg~~~~l~~~l~~~l~~ 260 (530)
+|+++.+ +++. ...++.+++...++.+++++++..++..+..... ..........+.|| ...+++.|.+.+.+
T Consensus 190 ~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l~~ 267 (495)
T 2vvm_A 190 ERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDG-QSAFARRFWEEAAG 267 (495)
T ss_dssp HHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTC-HHHHHHHHHHHHHT
T ss_pred HHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCC-HHHHHHHHHHHhhh
Confidence 9999887 6665 4678888888888889999998765443321100 00001122335566 45799999999998
Q ss_pred cC-CEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEE
Q 009646 261 RG-CEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKL 338 (530)
Q Consensus 261 ~G-~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l 338 (530)
.| ++|+++++|++|+.++ +.+ .|.+. ++++.||+||+|+|+..+.+++.+++++ ....+.++.+.+.+..++.+
T Consensus 268 ~g~~~i~~~~~V~~i~~~~--~~v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~~~~~~~kv~l 343 (495)
T 2vvm_A 268 TGRLGYVFGCPVRSVVNER--DAA-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAGHVSMCTKVHA 343 (495)
T ss_dssp TTCEEEESSCCEEEEEECS--SSE-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHCCCCCCEEEEE
T ss_pred cCceEEEeCCEEEEEEEcC--CEE-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhcCCCceeEEEE
Confidence 88 9999999999999876 444 45555 4589999999999999999887554443 23445677888888899999
Q ss_pred EeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhHhhcCCCCC
Q 009646 339 WFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTA 418 (530)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~p~~~~~ 418 (530)
.|++++|. ....+...+....+ .++... .+.+..++.. +...... +++++..+.++++|.+++|+..
T Consensus 344 ~~~~~~~~--~~~g~~~~~~~~~~-~~~~~~-----~~~~~~vl~~-~~~~~~~--~~~~e~~~~~~~~L~~~~~~~~-- 410 (495)
T 2vvm_A 344 EVDNKDMR--SWTGIAYPFNKLCY-AIGDGT-----TPAGNTHLVC-FGNSANH--IQPDEDVRETLKAVGQLAPGTF-- 410 (495)
T ss_dssp EESCGGGG--GEEEEECSSCSSCE-EEEEEE-----CTTSCEEEEE-EECSTTC--CCTTTCHHHHHHHHHTTSTTSC--
T ss_pred EECCccCC--CceeEecCCCCcEE-EecCCC-----CCCCCeEEEE-EeCcccc--CCCHHHHHHHHHHHHHhcCCCC--
Confidence 99998752 21111111122222 222211 1222234333 3332221 3455667888999999998632
Q ss_pred ccccceEEeCC------CCceecCCCCcc-cCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhCC
Q 009646 419 TVMDHKIRRFP------KSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 489 (530)
Q Consensus 419 ~i~~~~~~~~~------~a~~~~~~g~~~-~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~~ 489 (530)
.+....+.+|. ++++.+.||+.. .++....|.++|||||+++++.++ ++||||+.||++||++|++.++.
T Consensus 411 ~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~-g~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 411 GVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWR-SFIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp CEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSST-TSHHHHHHHHHHHHHHHHHHHCC
T ss_pred CceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCc-eEEEhHHHHHHHHHHHHHHHhcc
Confidence 34455555563 355556677642 234445678999999999987677 79999999999999999999873
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.4e-31 Score=273.51 Aligned_cols=416 Identities=16% Similarity=0.167 Sum_probs=251.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----cccc---------cccccHHHHHHHhCCCCCCCc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFW---------YPFRNIFSLVDELGIKPFTGW 112 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~---------~~~~~~~~~~~~lg~~~~~~~ 112 (530)
.++||+|||||++||+||+.|+++|++|+|+|+++++||++. .|+. .....+.++++++|++....+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcccccc
Confidence 357999999999999999999999999999999999999953 2321 124567889999998743332
Q ss_pred ccc-eeeccC-CcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccC--cchhhhcccCccHHHHH
Q 009646 113 MKS-AQYSEE-GLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDN--TDVAWRKYDSITARELF 188 (530)
Q Consensus 113 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~l 188 (530)
... ..+..+ +..... .. .++ ++.......+. ........+........ .......++..++.+|+
T Consensus 84 ~~~~~~~~~~~g~~~~~--~~---~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 152 (453)
T 2yg5_A 84 REGESVYISSAGERTRY--TG---DSF-PTNETTKKEMD-----RLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWL 152 (453)
T ss_dssp CCSEEEEECTTSCEEEE--CS---SSC-SCCHHHHHHHH-----HHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHH
T ss_pred cCCCEEEEeCCCceeec--cC---CCC-CCChhhHHHHH-----HHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHH
Confidence 222 122221 211110 00 011 01000000000 00000010111110000 01112335678999999
Q ss_pred HHhCCCHHHHHHhhhhhhhhhcCCCch-hchHHHHHHHHHHHH----HhhcCcceeEeecCCCcchhHHHHHHHHHhcCC
Q 009646 189 KQFGCSERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFII----LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 263 (530)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~l~~~~----~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~ 263 (530)
++.+.++. ...++.+++...++.+++ ++++..++..+.... ...........+.||+ ..+++.+.+. .|+
T Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~---lg~ 227 (453)
T 2yg5_A 153 INQSDDAE-ARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGM-QQVSIRMAEA---LGD 227 (453)
T ss_dssp HHHCSCHH-HHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCT-HHHHHHHHHH---HGG
T ss_pred HhhcCCHH-HHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCCh-HHHHHHHHHh---cCC
Confidence 99876654 566777777677777888 888876544332110 0000011224566764 5688877754 478
Q ss_pred EEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEeccC
Q 009646 264 EFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKK 343 (530)
Q Consensus 264 ~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~ 343 (530)
+|++|++|++|..++ +..+.|.++++++.||+||+|+|+..+.+++++++++ ....+.++.+.+.++.++.+.|+++
T Consensus 228 ~i~~~~~V~~i~~~~--~~~v~v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~~~~~ 304 (453)
T 2yg5_A 228 DVFLNAPVRTVKWNE--SGATVLADGDIRVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQSLGLVIKVHAVYETP 304 (453)
T ss_dssp GEECSCCEEEEEEET--TEEEEEETTTEEEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEEECCEEEEEEEESSC
T ss_pred cEEcCCceEEEEEeC--CceEEEEECCeEEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCCCcceEEEEEEECCC
Confidence 999999999999876 5413466678899999999999999998887655443 2334557778888889999999999
Q ss_pred CCCCCCC-ceeeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhHhhcCCCCCcc
Q 009646 344 VTVPNVS-NACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATV 420 (530)
Q Consensus 344 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i 420 (530)
+|..... +.+...+.+.. ..++.+. .+....++...+.. .+.+..++++++.+.++++|+++||.-. ..+
T Consensus 305 ~w~~~~~~g~~~~~~~~~~-~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~-~~p 377 (453)
T 2yg5_A 305 FWREDGLSGTGFGASEVVQ-EVYDNTN-----HEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKA-EEP 377 (453)
T ss_dssp GGGGGTEEEEEECTTSSSC-EEEECCC-----TTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGG-GCC
T ss_pred CCCCCCCCceeecCCCCeE-EEEeCCC-----CCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccC-CCc
Confidence 8743321 11111111222 2333221 11112333222211 1234456789999999999999997521 123
Q ss_pred ccceEEeCCC------Cc-eecCCCCcc-cCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhC
Q 009646 421 MDHKIRRFPK------SL-THFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 488 (530)
Q Consensus 421 ~~~~~~~~~~------a~-~~~~~g~~~-~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~ 488 (530)
......+|.. ++ +.+.||... .++...+|++||||||++++..++ ++||||+.||++||++|++.++
T Consensus 378 ~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~-g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 378 VVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGY-QHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp SEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTT-TSHHHHHHHHHHHHHHHHHHC-
T ss_pred cEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccc-cchHHHHHHHHHHHHHHHHHhc
Confidence 3444445532 22 245666422 234566788999999999987676 6999999999999999998764
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=2.6e-31 Score=273.32 Aligned_cols=405 Identities=16% Similarity=0.129 Sum_probs=253.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----cccc---------cccccHHHHHHHhCCCCCCCc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFW---------YPFRNIFSLVDELGIKPFTGW 112 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~---------~~~~~~~~~~~~lg~~~~~~~ 112 (530)
.++||+|||||++||+||+.|+++|++|+|||+++++||++. .|+. ..++.+.++++++|+......
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~~~ 94 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIRA 94 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcceeee
Confidence 457999999999999999999999999999999999999943 2322 225678899999998632111
Q ss_pred ----ccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHH
Q 009646 113 ----MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELF 188 (530)
Q Consensus 113 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 188 (530)
.....+..++... .++...... .....+.+.+... .+...... .....+..++.+|+
T Consensus 95 ~~~~~~~~~~~~~g~~~---------~~p~~~~~~--~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~s~~~~l 155 (478)
T 2ivd_A 95 ADPAAKRRYVYTRGRLR---------SVPASPPAF--LASDILPLGARLR---VAGELFSR-----RAPEGVDESLAAFG 155 (478)
T ss_dssp SCSSCCCEEEEETTEEE---------ECCCSHHHH--HTCSSSCHHHHHH---HHGGGGCC-----CCCTTCCCBHHHHH
T ss_pred cCccccceEEEECCEEE---------ECCCCHHHh--ccCCCCCHHHHHH---HhhhhhcC-----CCCCCCCCCHHHHH
Confidence 1111222222111 111111100 0001111111111 11111110 01124678999999
Q ss_pred HHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHh---------------------hcCc----ceeEeec
Q 009646 189 KQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA---------------------HQKN----FDLVWCR 243 (530)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~---------------------~~~~----~~~~~~~ 243 (530)
++. +++++.+.++.+++...++.+++++++......+..+... .... ....+++
T Consensus 156 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
T 2ivd_A 156 RRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFD 234 (478)
T ss_dssp HHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEET
T ss_pred HHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEEC
Confidence 984 7888899999999988899999999987654433322110 0011 3345566
Q ss_pred CCCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE----CCeeEecCEEEEccChhhHHHhhhhccccCh
Q 009646 244 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGISTLQELIKNSILCNR 319 (530)
Q Consensus 244 gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~----~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~ 319 (530)
||+ ..+++.|.+.+ |++|+++++|++|..++ ++ +.|.+ +++++.||.||+|+|++.+.++++..+ .
T Consensus 235 gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~~~--~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l~---~ 304 (478)
T 2ivd_A 235 GGL-QVLIDALAASL---GDAAHVGARVEGLARED--GG-WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPLD---D 304 (478)
T ss_dssp TCT-HHHHHHHHHHH---GGGEESSEEEEEEECC----C-CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTTC---H
T ss_pred CCH-HHHHHHHHHHh---hhhEEcCCEEEEEEecC--Ce-EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhccC---H
Confidence 774 56888887655 68999999999999876 43 34554 456899999999999999998886432 2
Q ss_pred HHHHhhccccceeEEEEEEEeccCCCCC-CCCceeecc--CCCccceeeeccccccccCCCCCeEEEEEecCC--CCCCC
Q 009646 320 EEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA--NELMP 394 (530)
Q Consensus 320 ~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 394 (530)
...+.+..+.+.++.++.+.++++++.. ...+.+... +....+..++.. ..+...+.+..++.+..... ..+..
T Consensus 305 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~p~g~~~l~~~~~~~~~~~~~~ 383 (478)
T 2ivd_A 305 ALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHAST-TFPFRAEGGRVLYSCMVGGARQPGLVE 383 (478)
T ss_dssp HHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHH-HCGGGBSTTCEEEEEEEECTTCGGGGG
T ss_pred HHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcc-cCCCcCCCCCEEEEEEeCCcCCccccC
Confidence 3445677888888999999999987543 222212110 011122233322 11222233444443333222 23446
Q ss_pred CCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccC----CCCCCCCCceEEeeccccCCCCCCcch
Q 009646 395 LKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MRGFTSFPNLFMAGDWITTRHGSWSQE 470 (530)
Q Consensus 395 ~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~----~~~~~~~~~l~~aG~~~~~g~~~~~ie 470 (530)
.+++++.+.++++|+++||... .+....+.+|.++.+.+.+|+.... +.... .+||||||+++. | .+|+
T Consensus 384 ~~~~~~~~~~~~~l~~~~~~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~-g---~gv~ 456 (478)
T 2ivd_A 384 QDEDALAALAREELKALAGVTA--RPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYK-G---VGLN 456 (478)
T ss_dssp SCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTS-C---CSHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCC-C---CCHH
Confidence 7899999999999999998643 4555667789998888888863211 11112 589999999983 2 3699
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 009646 471 RSYVTGLEAANRVVDYLG 488 (530)
Q Consensus 471 ga~~sG~~aA~~il~~~~ 488 (530)
+|+.||+++|++|++.++
T Consensus 457 gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 457 DCIRNAAQLADALVAGNT 474 (478)
T ss_dssp HHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999988776
No 9
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=5.5e-31 Score=272.69 Aligned_cols=412 Identities=16% Similarity=0.166 Sum_probs=254.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----cccc---------cccccHHHHHHHhCCCCCCCc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFW---------YPFRNIFSLVDELGIKPFTGW 112 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~---------~~~~~~~~~~~~lg~~~~~~~ 112 (530)
.++||+|||||++||+||+.|+++|++|+|+|+++++||++. .|+. ..++.+.++++++|+.....+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~~ 91 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQF 91 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccccee
Confidence 458999999999999999999999999999999999999843 2322 234668899999998743222
Q ss_pred cc---ceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHH
Q 009646 113 MK---SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 189 (530)
Q Consensus 113 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 189 (530)
.. ...+..++... .++..... +.....++..++.... ................+..++.+|++
T Consensus 92 ~~~~~~~~~~~~g~~~---------~~p~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~l~ 157 (504)
T 1sez_A 92 PLSQNKRYIARNGTPV---------LLPSNPID--LIKSNFLSTGSKLQML---LEPILWKNKKLSQVSDSHESVSGFFQ 157 (504)
T ss_dssp CSSCCCEEEESSSSEE---------ECCSSHHH--HHHSSSSCHHHHHHHH---THHHHC----------CCCBHHHHHH
T ss_pred ccCCCceEEEECCeEE---------ECCCCHHH--HhccccCCHHHHHHHh---HhhhccCcccccccCCCCccHHHHHH
Confidence 11 11122222111 11111100 0011111211111110 00000000000001134589999998
Q ss_pred HhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhc-----------------------------CcceeE
Q 009646 190 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQ-----------------------------KNFDLV 240 (530)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~-----------------------------~~~~~~ 240 (530)
+. +++++.+.++.+++...++.+++++++..+...++......+ ......
T Consensus 158 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (504)
T 1sez_A 158 RH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF 236 (504)
T ss_dssp HH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB
T ss_pred HH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE
Confidence 85 778889999999998889999999988765444433221100 001234
Q ss_pred eecCCCcchhHHHHHHHHHhcC-CEEEcCceeeEEEecCCCCe----EEEEEE--C-C---eeEecCEEEEccChhhHHH
Q 009646 241 WCRGTLREKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCC----ISDVVC--G-K---ETYSAGAVVLAVGISTLQE 309 (530)
Q Consensus 241 ~~~gg~~~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g~----v~~v~~--~-~---~~~~ad~VV~a~~~~~~~~ 309 (530)
.+.||+ +.|+++|++ +.| ++|++|++|++|..++ ++. .+.|.. + + +++.||+||+|+|+..+.+
T Consensus 237 ~~~GG~-~~l~~~l~~---~l~~~~i~~~~~V~~I~~~~-~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ 311 (504)
T 1sez_A 237 SFLGGM-QTLTDAICK---DLREDELRLNSRVLELSCSC-TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKS 311 (504)
T ss_dssp EETTCT-HHHHHHHHT---TSCTTTEETTCCEEEEEEEC-SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHT
T ss_pred eeCcHH-HHHHHHHHh---hcccceEEcCCeEEEEEecC-CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHH
Confidence 556774 567777774 445 7999999999999876 331 123333 2 3 4789999999999999999
Q ss_pred hhhh---ccccChHHHHhhccccceeEEEEEEEeccCCCCCCC--CceeeccCC-----CccceeeeccccccccCCCCC
Q 009646 310 LIKN---SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV--SNACSGFGD-----SLAWTFFDLNKIYDEHKDDSA 379 (530)
Q Consensus 310 ll~~---~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 379 (530)
++.+ .+.+. ..+..+.+.++.++.+.|++++|.... ..++..... ......+. +...+...+.+.
T Consensus 312 ll~~~~~~~~~~----~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-s~~~~~~~p~g~ 386 (504)
T 1sez_A 312 MKIAKRGNPFLL----NFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFS-SMMFPDRAPNNV 386 (504)
T ss_dssp SEEESSSSBCCC----TTSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEH-HHHCGGGSCTTE
T ss_pred HhhcccCCcccH----HHHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEee-ccccCCcCCCCC
Confidence 8842 12211 125667778889999999998764221 212111110 00011121 112222333333
Q ss_pred eEEEEEecC---CCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCC---CCCCCCCce
Q 009646 380 TVIQADFYH---ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMM---RGFTSFPNL 453 (530)
Q Consensus 380 ~~~~~~~~~---~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~---~~~~~~~~l 453 (530)
.++. .+.. ...+..++++++++.++++|++++|.. ..+....+.+|+.+++.+.+|+....+ ...++++||
T Consensus 387 ~~l~-~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~--~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l 463 (504)
T 1sez_A 387 YLYT-TFVGGSRNRELAKASRTELKEIVTSDLKQLLGAE--GEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGL 463 (504)
T ss_dssp EEEE-EEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBC--SCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTE
T ss_pred EEEE-EEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCE
Confidence 3433 3322 234567889999999999999999763 246677788898888889888643221 123457899
Q ss_pred EEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhCC
Q 009646 454 FMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 489 (530)
Q Consensus 454 ~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~~ 489 (530)
||||++++ + .+|++|+.||++||++|++.++.
T Consensus 464 ~~aG~~~~---g-~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 464 FYAGNHRG---G-LSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp EECCSSSS---C-SSHHHHHHHHHHHHHHHHHHHSS
T ss_pred EEEeecCC---C-CCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999985 2 48999999999999999998874
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=3.8e-31 Score=271.78 Aligned_cols=414 Identities=16% Similarity=0.148 Sum_probs=259.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCCCCCcc----cccc---------cccccHHHHHHHhCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGFGSPDD----ISFW---------YPFRNIFSLVDELGIKPFTG 111 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G--~~V~vlE~~~~~GG~~~----~g~~---------~~~~~~~~~~~~lg~~~~~~ 111 (530)
++||+|||||++||+||++|+++| ++|+|||+++++||++. .|+. ..++.+.++++++|++....
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~~ 83 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKLV 83 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGGEE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcceEe
Confidence 579999999999999999999999 99999999999999833 3332 23567889999999984322
Q ss_pred cc--cceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHH
Q 009646 112 WM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 189 (530)
Q Consensus 112 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 189 (530)
.. .......++.....+.. ....++..+.. +.....++..++. ........ .....+...+..++.+|++
T Consensus 84 ~~~~~~~~~~~~g~~~~~p~~-~~~~~p~~~~~--~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~s~~~~l~ 155 (475)
T 3lov_A 84 RNNTSQAFILDTGGLHPIPKG-AVMGIPTDLDL--FRQTTLLTEEEKQ----EVADLLLH-PSDSLRIPEQDIPLGEYLR 155 (475)
T ss_dssp ECCCCCEEEEETTEEEECCSS-EETTEESCHHH--HTTCSSSCHHHHH----HHHHHHHS-CCTTCCCCSSCCBHHHHHH
T ss_pred ecCCCceEEEECCEEEECCCc-ccccCcCchHH--HhhccCCChhHHH----HhhCcccC-CcccccCCCCCcCHHHHHH
Confidence 11 11111222211110000 00001111110 1111222222222 11111111 0111112346789999999
Q ss_pred HhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhh----------c--------------CcceeEeecCC
Q 009646 190 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH----------Q--------------KNFDLVWCRGT 245 (530)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~----------~--------------~~~~~~~~~gg 245 (530)
+. +..++.+.++.+++...++.++++++.......+..+.... . .......+++|
T Consensus 156 ~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 234 (475)
T 3lov_A 156 PR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETG 234 (475)
T ss_dssp HH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTC
T ss_pred HH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCCh
Confidence 84 67888999999999999999999988754333332211100 0 02233455666
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 325 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~ 325 (530)
+ ..+++.|.+.+.+ ++|+++++|++|+.++ +.+ .|.++++++.||+||+|+|++.+.++++++++ ..+
T Consensus 235 ~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~ad~vV~a~p~~~~~~ll~~~~~------~~~ 302 (475)
T 3lov_A 235 L-ESLIERLEEVLER--SEIRLETPLLAISRED--GRY-RLKTDHGPEYADYVLLTIPHPQVVQLLPDAHL------PEL 302 (475)
T ss_dssp H-HHHHHHHHHHCSS--CEEESSCCCCEEEEET--TEE-EEECTTCCEEESEEEECSCHHHHHHHCTTSCC------HHH
T ss_pred H-HHHHHHHHhhccC--CEEEcCCeeeEEEEeC--CEE-EEEECCCeEECCEEEECCCHHHHHHHcCccCH------HHH
Confidence 4 4577777765544 7999999999999876 544 46666558999999999999999999876532 466
Q ss_pred ccccceeEEEEEEEeccCCCCCCC-CceeeccCCCcc--ceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHH
Q 009646 326 LNLASIDVVSVKLWFDKKVTVPNV-SNACSGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQV 400 (530)
Q Consensus 326 ~~l~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eei 400 (530)
..+.+.++.++.+.|+++++.+.. .+.+........ .+.++ +...+...+. ..++.+.+.. ...+...+++++
T Consensus 303 ~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~ 380 (475)
T 3lov_A 303 EQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVL 380 (475)
T ss_dssp HTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHH
T ss_pred hcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHH
Confidence 788899999999999998832211 112221111111 01122 1111112222 3333333322 233556789999
Q ss_pred HHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCccc----CCCCCCCCCceEEeeccccCCCCCCcchHHHHHH
Q 009646 401 VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTG 476 (530)
Q Consensus 401 ~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~----~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG 476 (530)
++.++++|.++||.. ..+....+.+|+++++.+.+|+... ++...++.+||||||+++.+ .+|++|+.||
T Consensus 381 ~~~~~~~L~~~~g~~--~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g----~g~~~a~~sG 454 (475)
T 3lov_A 381 QQAVLQDLEKICGRT--LEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG----VGLPDCVASA 454 (475)
T ss_dssp HHHHHHHHHHHHSSC--CCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC----SSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC--CCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC----CCHHHHHHHH
Confidence 999999999999753 3566778889999999999986322 12223456899999998852 3699999999
Q ss_pred HHHHHHHHHHhCC
Q 009646 477 LEAANRVVDYLGD 489 (530)
Q Consensus 477 ~~aA~~il~~~~~ 489 (530)
+++|++|++.++.
T Consensus 455 ~~aA~~i~~~l~~ 467 (475)
T 3lov_A 455 KTMIESIELEQSH 467 (475)
T ss_dssp HHHHHHHHHTC--
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998874
No 11
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.98 E-value=2.4e-31 Score=276.30 Aligned_cols=415 Identities=14% Similarity=0.143 Sum_probs=253.4
Q ss_pred CCCCCCCCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCcc-----ccccc---------ccccHHHHHHHhC
Q 009646 41 NNNGKNKKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGNGFGSPDD-----ISFWY---------PFRNIFSLVDELG 105 (530)
Q Consensus 41 ~~~~~~~~dVvIIGaG~aGL~aA~~La~~-G~~V~vlE~~~~~GG~~~-----~g~~~---------~~~~~~~~~~~lg 105 (530)
|+.+..++||||||||++||+||++|+++ |++|+|||+++++||++. +||.+ .++.+.+++++++
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~ 83 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEAL 83 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHS
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhC
Confidence 45555679999999999999999999984 999999999999999832 45442 3566889999987
Q ss_pred CCCC--CCcccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccc-hhHHHhhhccCcchhhhcccCc
Q 009646 106 IKPF--TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSL-PLMAAVIDFDNTDVAWRKYDSI 182 (530)
Q Consensus 106 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 182 (530)
.... ...........++.....+ +. .....++........ .++..... ......+..
T Consensus 84 ~~~~~~~~~~~~~~i~~~g~~~~~p-----------~~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 143 (513)
T 4gde_A 84 PKEDDWYTHQRISYVRCQGQWVPYP-----------FQ----NNISMLPKEEQVKCIDGMIDAALE-----ARVANTKPK 143 (513)
T ss_dssp CSGGGEEEEECCEEEEETTEEEESS-----------GG----GGGGGSCHHHHHHHHHHHHHHHHH-----HHTCCSCCC
T ss_pred CccceeEEecCceEEEECCeEeecc-----------hh----hhhhhcchhhHHHHHHHHHHHHHh-----hhccccccc
Confidence 6521 1111112222222211111 10 011111111111110 01111000 111223456
Q ss_pred cHHHHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHH---------HHHHHHHHhhc-----CcceeEee-cCCCc
Q 009646 183 TARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATL---------GILYFIILAHQ-----KNFDLVWC-RGTLR 247 (530)
Q Consensus 183 s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~---------~~l~~~~~~~~-----~~~~~~~~-~gg~~ 247 (530)
++++|+.+. +.+.+.+.++.++....++.+++++++.++. ........... ......++ +|| .
T Consensus 144 s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~ 221 (513)
T 4gde_A 144 TFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGG-T 221 (513)
T ss_dssp SHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSH-H
T ss_pred CHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCC-H
Confidence 889998763 5688889999999999999999988875431 11111111111 11123344 455 5
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhcc
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 327 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 327 (530)
..++++|++.+.+.|++|+++++|++|..++ +++ +..+|+++.||+||+|+|...+.+++.+. ........
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l~~~-----~~~~~~~~ 292 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANN--KTV--TLQDGTTIGYKKLVSTMAVDFLAEAMNDQ-----ELVGLTKQ 292 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTT--TEE--EETTSCEEEEEEEEECSCHHHHHHHTTCH-----HHHHHHTT
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccC--CEE--EEcCCCEEECCEEEECCCHHHHHHhcCch-----hhHhhhhc
Confidence 6799999999999999999999999999876 543 34567799999999999999999988753 23344567
Q ss_pred ccceeEEEEEEEeccCCCCCC-CCceeeccCCCc-cceeeeccccccccCCCCC-eEEEEEe------------------
Q 009646 328 LASIDVVSVKLWFDKKVTVPN-VSNACSGFGDSL-AWTFFDLNKIYDEHKDDSA-TVIQADF------------------ 386 (530)
Q Consensus 328 l~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------ 386 (530)
+.+.++..+.+.++....... +...++..+... -..+.......+...+.+. .+....+
T Consensus 293 l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (513)
T 4gde_A 293 LFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWS 372 (513)
T ss_dssp CCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEE
T ss_pred ccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEE
Confidence 888888888888876643211 111111001000 0000000000000000000 1111111
Q ss_pred ----cCCCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCC--CCCceEEeeccc
Q 009646 387 ----YHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFT--SFPNLFMAGDWI 460 (530)
Q Consensus 387 ----~~~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~--~~~~l~~aG~~~ 460 (530)
.....+..++++++++.++++|.++.+-...+.++..++.||++++|.+..|+...+..... ..+|||++|.+.
T Consensus 373 ~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~~~l~~~GR~g 452 (513)
T 4gde_A 373 IMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFG 452 (513)
T ss_dssp EEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTT
T ss_pred EEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhhcCcEEecCCc
Confidence 11234557889999999999999998655555788889999999999999987543221111 126999999776
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHH
Q 009646 461 TTRHGSWSQERSYVTGLEAANRVVDY 486 (530)
Q Consensus 461 ~~g~~~~~iega~~sG~~aA~~il~~ 486 (530)
...|..++|++|+++|++||+.|++.
T Consensus 453 ~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 453 SWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp TCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred ccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 54442247999999999999999973
No 12
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.97 E-value=4.1e-30 Score=266.00 Aligned_cols=420 Identities=13% Similarity=0.099 Sum_probs=195.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----cccccc-------cc-cHHHHHHHhCCCC--CCCc
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFWYP-------FR-NIFSLVDELGIKP--FTGW 112 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~~~-------~~-~~~~~~~~lg~~~--~~~~ 112 (530)
+++|||||||++||+||++|+++|++|+|||+++++||+.. +||.++ .+ .+.++++.+|... ...+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~~~~~~~l~~~~g~~~~~~~~~ 80 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITDPSAIEELFALAGKQLKEYVEL 80 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSCTHHHHHHHHTTTCCGGGTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecCchhHHHHHHHhcchhhhceee
Confidence 47899999999999999999999999999999999999943 555432 12 2445667776541 1111
Q ss_pred cc---c-eeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhh---hccchhHHHhhhccC--------------
Q 009646 113 MK---S-AQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDR---LTSLPLMAAVIDFDN-------------- 171 (530)
Q Consensus 113 ~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------------- 171 (530)
.. . .....++..... +....... ..+..+...+. .++........+...
T Consensus 81 ~~~~~~~~~~~~~g~~~~~---------~~~~~~~~-~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (501)
T 4dgk_A 81 LPVTPFYRLCWESGKVFNY---------DNDQTRLE-AQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDM 150 (501)
T ss_dssp EEESSSEEEEETTSCEEEE---------CSCHHHHH-HHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHH
T ss_pred EecCcceEEEcCCCCEEEe---------eccHHHHH-HHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhh
Confidence 11 1 111222221110 00000000 00000000000 000000000000000
Q ss_pred --cchhhhccc-CccHHHHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhcCcceeEeecCCCcc
Q 009646 172 --TDVAWRKYD-SITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLRE 248 (530)
Q Consensus 172 --~~~~~~~~~-~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~~~gg~~~ 248 (530)
....+..+. ..++.+++.+. +.++.++.++.... ...+..+...+.... .+... . ......+++||+ .
T Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~g~~p~~~~~~~~--~~~~~-~---~~~G~~~p~GG~-~ 221 (501)
T 4dgk_A 151 LRAAPQLAKLQAWRSVYSKVASY-IEDEHLRQAFSFHS-LLVGGNPFATSSIYT--LIHAL-E---REWGVWFPRGGT-G 221 (501)
T ss_dssp HHSGGGTTTSHHHHHHHHHHHTT-CCCHHHHHHHHHHH-HHHHSCC--CCCTHH--HHHHH-H---SCCCEEEETTHH-H
T ss_pred hhhhhhhhhhhhcccHHHHHHHH-hccHHHHhhhhhhh-cccCCCcchhhhhhh--hhhhh-h---ccCCeEEeCCCC-c
Confidence 000000000 12445555554 33333444443222 222333333333221 11111 1 122345788875 5
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHH-HhhhhccccChHHHHhhc
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ-ELIKNSILCNREEFLKVL 326 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~-~ll~~~~~~~~~~~~~~~ 326 (530)
.++++|++.++++|++|++|++|++|..++ +++++|++. |+++.||.||++++++.+. .|++..+.+. ...+.+.
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~-~~~~~~~ 298 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAV-KQSNKLQ 298 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC------------------------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccch-hhhhhhh
Confidence 799999999999999999999999999987 888888886 5689999999999988665 5665543321 2223344
Q ss_pred cccc-eeEEEEEEEeccCCCCCCCCceeeccCC-------------Ccc-cee-eeccccccccCCCCCeEEEE-EecCC
Q 009646 327 NLAS-IDVVSVKLWFDKKVTVPNVSNACSGFGD-------------SLA-WTF-FDLNKIYDEHKDDSATVIQA-DFYHA 389 (530)
Q Consensus 327 ~l~~-~~~~~v~l~~~~~~~~~~~~~~~~~~~~-------------~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~ 389 (530)
.+.. .+..++++.++.+......+.++.+.+. ... ..+ ...+..++.+.+++.+.+.+ ...+.
T Consensus 299 ~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~ 378 (501)
T 4dgk_A 299 TKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPH 378 (501)
T ss_dssp ----CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECC
T ss_pred ccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCc
Confidence 4433 3456788888887643333333322110 001 111 11233445666666654433 22222
Q ss_pred CCCCC----CCHHHHHHHHHHHHhHh-hcCCCCCccccceEEe----------CCCCceecCCC--C-cccCCCC-CCCC
Q 009646 390 NELMP----LKDDQVVAKAVSYLSKC-IKDFSTATVMDHKIRR----------FPKSLTHFFPG--S-YKYMMRG-FTSF 450 (530)
Q Consensus 390 ~~~~~----~~~eei~~~~l~~L~~~-~p~~~~~~i~~~~~~~----------~~~a~~~~~~g--~-~~~~~~~-~~~~ 450 (530)
..... ..++++.+++++.|++. +|++++ .++...+.. +.++.+...+. + ...||.. .+++
T Consensus 379 ~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~~-~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i 457 (501)
T 4dgk_A 379 LGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRS-QLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTI 457 (501)
T ss_dssp TTTSCCCHHHHHHHHHHHHHHHHHHHTCTTHHH-HEEEEEEECTTTTC------------------------------CC
T ss_pred cccccccHHHHHHHHHHHHHHHHHHhhCCChHH-ceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCC
Confidence 11111 22467788899999875 588753 344333321 11222222221 1 1235544 4789
Q ss_pred CceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhCCCCc
Q 009646 451 PNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSF 492 (530)
Q Consensus 451 ~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~~~~~ 492 (530)
+|||+||+++++| +++++|+.||+.||+.|++++..|+.
T Consensus 458 ~gLyl~G~~t~pG---~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 458 TNLYLVGAGTHPG---AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp TTEEECCCH---------HHHHHHHHHHHHHHHHHHHC----
T ss_pred CCEEEECCCCCCc---ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999875 36999999999999999999976543
No 13
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.97 E-value=3.2e-29 Score=256.23 Aligned_cols=406 Identities=14% Similarity=0.096 Sum_probs=250.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCCCCCcc-----cccc---------cccccHHHHHHHhCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGNGFGSPDD-----ISFW---------YPFRNIFSLVDELGIKPF 109 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G-~~V~vlE~~~~~GG~~~-----~g~~---------~~~~~~~~~~~~lg~~~~ 109 (530)
...+||+|||||++||++|++|+++| .+|+|+|+++++||++. .|+. ..++.+.++++++. +.+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~ 85 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGW 85 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhh
Confidence 34689999999999999999999998 79999999999999943 3333 23455778888874 322
Q ss_pred CCcccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHH
Q 009646 110 TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 189 (530)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 189 (530)
...........++.....++ . ..+..++....... +...+... ......+..++++|+.
T Consensus 86 ~~~~~~~~~~~~g~~~~~P~-----------~----~~~~~l~~~~~~~~---~~~ll~~~---~~~~~~~~~s~~e~~~ 144 (484)
T 4dsg_A 86 NVLQRESWVWVRGRWVPYPF-----------Q----NNIHRLPEQDRKRC---LDELVRSH---ARTYTEPPNNFEESFT 144 (484)
T ss_dssp EEEECCCEEEETTEEEESSG-----------G----GCGGGSCHHHHHHH---HHHHHHHH---HCCCSSCCSSHHHHHH
T ss_pred hhccCceEEEECCEEEEeCc-----------c----chhhhCCHHHHHHH---HHHHHHHH---hccCCCCCCCHHHHHH
Confidence 21111112122222111110 0 00111121111111 11111100 0012235678999998
Q ss_pred HhCCCHHHHHHhhhhhhhhhcCCCchhchHHHH---------HHHHHHHHHhhc-----CcceeEeec-CCCcchhHHHH
Q 009646 190 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAAT---------LGILYFIILAHQ-----KNFDLVWCR-GTLREKIFEPW 254 (530)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---------~~~l~~~~~~~~-----~~~~~~~~~-gg~~~~l~~~l 254 (530)
+. ++..+.+.++.+++...++.+++++++.++ ...+........ ....+.+|. || ...++++|
T Consensus 145 ~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG-~~~l~~~l 222 (484)
T 4dsg_A 145 RQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGG-TGIIYQAI 222 (484)
T ss_dssp HH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSC-THHHHHHH
T ss_pred HH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCC-HHHHHHHH
Confidence 85 678888899999999999999999888532 112222221111 122345565 55 56788888
Q ss_pred HHHHHhcCCEEEcC--ceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhc--cccChHHHHhhccccc
Q 009646 255 MDSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNS--ILCNREEFLKVLNLAS 330 (530)
Q Consensus 255 ~~~l~~~G~~i~~~--~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~--~~~~~~~~~~~~~l~~ 330 (530)
++.+.+ .+|+++ ++|++|..++ +.+. ..+|+++.||+||+|+|++.+.+++.+. ++ .....+.+..+.+
T Consensus 223 a~~l~~--~~i~~~~~~~V~~I~~~~--~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~-~~~~~~~l~~l~y 295 (484)
T 4dsg_A 223 KEKLPS--EKLTFNSGFQAIAIDADA--KTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKG-YDEWPAIADKMVY 295 (484)
T ss_dssp HHHSCG--GGEEECGGGCEEEEETTT--TEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTT-GGGHHHHHHHCCE
T ss_pred Hhhhhh--CeEEECCCceeEEEEecC--CEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCC-CHHHHHHHhCCCc
Confidence 877654 289999 5699999876 5432 2456689999999999999999998651 11 1233445778899
Q ss_pred eeEEEEEEEeccCCCC--CCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009646 331 IDVVSVKLWFDKKVTV--PNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 408 (530)
Q Consensus 331 ~~~~~v~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L 408 (530)
.++.++.+.++.+... +..+.+++.-.......+...++..+...+.+.+++.+.+... .....+++++++.++++|
T Consensus 296 ~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~d~~l~~~a~~~L 374 (484)
T 4dsg_A 296 SSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES-KYKPVNHSTLIEDCIVGC 374 (484)
T ss_dssp EEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCCTTSHHHHHHHHH
T ss_pred CceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC-cCCcCCHHHHHHHHHHHH
Confidence 9999999999887421 1122222211111000111112222333344455554444332 344678999999999999
Q ss_pred hHhhcCCCC-CccccceEEeCCCCceecCCCCcccCCCCC---CCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHH
Q 009646 409 SKCIKDFST-ATVMDHKIRRFPKSLTHFFPGSYKYMMRGF---TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 484 (530)
Q Consensus 409 ~~~~p~~~~-~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~---~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il 484 (530)
.++. .+.. ..+...++.+|+.++|.+.+|+...+.... ... ||+++|.+....+++..|++|+.+|++||+.|+
T Consensus 375 ~~~~-~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 375 LASN-LLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHTT-SCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHcC-CCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 9986 3332 234556788999999999999643322111 123 999999977544532379999999999999996
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.96 E-value=1e-28 Score=253.08 Aligned_cols=409 Identities=14% Similarity=0.177 Sum_probs=230.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCCCcc----ccc-------cc------ccccHHHHHHH-hCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGSPDD----ISF-------WY------PFRNIFSLVDE-LGI 106 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~~~GG~~~----~g~-------~~------~~~~~~~~~~~-lg~ 106 (530)
..+||+|||||++||++|+.|+++|+ +|+|+|+++++||++. .|+ +. ....+.+++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 35799999999999999999999998 8999999999999942 121 11 12457889999 898
Q ss_pred CCCC-Cccc--ceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCcc
Q 009646 107 KPFT-GWMK--SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSIT 183 (530)
Q Consensus 107 ~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 183 (530)
.... .+.. ...+..++... +.......+. ..... ............ . ...+.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~g~~~-----------~~~~~~~~~~------~~~~~--~~~~~~~~~~~~-~---~~~~~~s 139 (472)
T 1b37_A 83 RNFRSDFDYLAQNVYKEDGGVY-----------DEDYVQKRIE------LADSV--EEMGEKLSATLH-A---SGRDDMS 139 (472)
T ss_dssp CEEECCCTTGGGCEECSSSSBC-----------CHHHHHHHHH------HHHHH--HHHHHHHHHTSC-T---TCTTCCB
T ss_pred ceeeccCccccceeEcCCCCCC-----------CHHHHHHHHH------HHHHH--HHHHHHHHHhhc-c---ccchhhh
Confidence 7421 1111 11222222110 0000000000 00000 000000000000 0 1123444
Q ss_pred HHH--HHHHhCC--CHHHHHHhhhhhhhh-hcCCCchhchHHHHHHHHHHHHHhhcCcceeEeecCCCcchhHHHHHHHH
Q 009646 184 ARE--LFKQFGC--SERLYRNVIGPLVQV-GLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSM 258 (530)
Q Consensus 184 ~~~--~l~~~g~--~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~~~gg~~~~l~~~l~~~l 258 (530)
+.+ ++.+... .....+.++.++... .+..+.+..+...... ...+. .......+....|| ++.+++.|.+.+
T Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~-~~~~~~~~~~~~gG-~~~l~~~l~~~l 216 (472)
T 1b37_A 140 ILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LATFS-DFGDDVYFVADQRG-YEAVVYYLAGQY 216 (472)
T ss_dssp HHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSS-CHHHH-HHCSEEEEECCTTC-TTHHHHHHHHTT
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccc-ccccc-ccCCceeeeecCCc-HHHHHHHHHHhc
Confidence 443 4443221 111123334333321 1233444444321110 00110 11111112223455 457888888777
Q ss_pred Hhc--------CCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhhhh--ccccChHHHHhhcc
Q 009646 259 RTR--------GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKN--SILCNREEFLKVLN 327 (530)
Q Consensus 259 ~~~--------G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~--~~~~~~~~~~~~~~ 327 (530)
.+. |++|+++++|++|..++ +.+. |.+. ++++.||+||+|+|++.+.+++.. ++++ ....++++.
T Consensus 217 ~~~~~~~~~i~~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~~ai~~ 292 (472)
T 1b37_A 217 LKTDDKSGKIVDPRLQLNKVVREIKYSP--GGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKVRAIYQ 292 (472)
T ss_dssp SCBCTTTCCBCCTTEESSCCEEEEEECS--SCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHHHHHHH
T ss_pred cccccccccccccEEEcCCEEEEEEEcC--CcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHHHHHHh
Confidence 654 78999999999999876 4454 6665 458999999999999999876532 3332 334556788
Q ss_pred ccceeEEEEEEEeccCCCCCCCCceeecc-CCCcc-ceeeeccccccccCCCCCeEEEEEecCC--CCCCCCCHHHHHHH
Q 009646 328 LASIDVVSVKLWFDKKVTVPNVSNACSGF-GDSLA-WTFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLKDDQVVAK 403 (530)
Q Consensus 328 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~eei~~~ 403 (530)
+.+.++.++.+.|++++|.......+... ....+ ...+.. ..+. .+ +++++...+... ..+..++++++.+.
T Consensus 293 ~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~p-~~~~l~~~~~~~~a~~~~~~~~~e~~~~ 368 (472)
T 1b37_A 293 FDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQE--FEKQ-YP-DANVLLVTVTDEESRRIEQQSDEQTKAE 368 (472)
T ss_dssp SEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEE--CTTT-ST-TCCEEEEEEEHHHHHHHHTSCHHHHHHH
T ss_pred cCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeec--ccCC-CC-CCCEEEEEechHHHHHHHhCCHHHHHHH
Confidence 88888899999999998754221111111 11110 011110 1111 12 334443333221 23445789999999
Q ss_pred HHHHHhHhhcCCCCCccccceEEeC------CCCceecCCCCcc-cCCCCCCCCCceEEeeccccCCCCCCcchHHHHHH
Q 009646 404 AVSYLSKCIKDFSTATVMDHKIRRF------PKSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTG 476 (530)
Q Consensus 404 ~l~~L~~~~p~~~~~~i~~~~~~~~------~~a~~~~~~g~~~-~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG 476 (530)
++++|+++||+.....+....+.+| .+++..+.+|+.. .++...+|++||||||++++++++ ++||||+.||
T Consensus 369 ~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~-g~v~GA~~SG 447 (472)
T 1b37_A 369 IMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYN-GYVHGAYLSG 447 (472)
T ss_dssp HHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTT-TSHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCC-CchhHHHHHH
Confidence 9999999998753223344444445 3444445667642 234456788999999999988666 7999999999
Q ss_pred HHHHHHHHHHhCC
Q 009646 477 LEAANRVVDYLGD 489 (530)
Q Consensus 477 ~~aA~~il~~~~~ 489 (530)
++||++|++.++.
T Consensus 448 ~~aA~~i~~~l~~ 460 (472)
T 1b37_A 448 IDSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 15
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.96 E-value=2.5e-27 Score=240.38 Aligned_cols=388 Identities=14% Similarity=0.130 Sum_probs=224.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----c---ccc---------cc-cccHHHHHHHhCCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----I---SFW---------YP-FRNIFSLVDELGIKPFT 110 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~---g~~---------~~-~~~~~~~~~~lg~~~~~ 110 (530)
+||||||||++||+||++|+++|++|+|||+++++||+.. + |.. .. .+.+.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 7999999999999999999999999999999999999843 2 221 12 45677888899987322
Q ss_pred Ccccce-ee-ccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccC----cchhhhcccCccH
Q 009646 111 GWMKSA-QY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDN----TDVAWRKYDSITA 184 (530)
Q Consensus 111 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~ 184 (530)
...... .+ ..++. ... . ...+.... .... . ....+......+.. .......++ .++
T Consensus 82 ~~~~~~~~~~~~~~~-~~~----~-~~~~~~~~----~~~~-----~--~~~~l~~~~~~~~~~~~~~~~~~~~~d-~s~ 143 (431)
T 3k7m_X 82 ASEFTSFRHRLGPTA-VDQ----A-FPIPGSEA----VAVE-----A--ATYTLLRDAHRIDLEKGLENQDLEDLD-IPL 143 (431)
T ss_dssp CCCCCEECCBSCTTC-CSS----S-SCCCGGGH----HHHH-----H--HHHHHHHHHTTCCTTTCTTSSSCGGGC-SBH
T ss_pred cCCCCcEEEEecCCe-ecC----C-CCCCHHHH----HHHH-----H--HHHHHHHHHHhcCCCCCccCcchhhhc-CCH
Confidence 211111 11 11110 000 0 00000000 0000 0 00000111111100 001223445 889
Q ss_pred HHHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHH----H-hhcCcceeEeecCCCcchhHHHHHHHHH
Q 009646 185 RELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----L-AHQKNFDLVWCRGTLREKIFEPWMDSMR 259 (530)
Q Consensus 185 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~----~-~~~~~~~~~~~~gg~~~~l~~~l~~~l~ 259 (530)
.+++...+.++.. ..++..+....++.+..+++.......+.... . .... +. ...+++ ..+.+.+. +
T Consensus 144 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~g~-~~l~~~~~---~ 215 (431)
T 3k7m_X 144 NEYVDKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSL--DE-VFSNGS-ADLVDAMS---Q 215 (431)
T ss_dssp HHHHHHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTC--CE-EETTCT-HHHHHHHH---T
T ss_pred HHHHHhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecch--hh-hcCCcH-HHHHHHHH---h
Confidence 9999988776653 45566666666777878888876544332210 0 0000 11 233432 23333333 4
Q ss_pred hcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEE
Q 009646 260 TRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKL 338 (530)
Q Consensus 260 ~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l 338 (530)
+.| +|+++++|++|+.++ +.+ .|.+. ++++.||+||+|+|+..+.++...++++ ....+++..+.+....++.+
T Consensus 216 ~~g-~i~~~~~V~~i~~~~--~~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~~~~~~kv~~ 290 (431)
T 3k7m_X 216 EIP-EIRLQTVVTGIDQSG--DVV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGHGGQGLKILI 290 (431)
T ss_dssp TCS-CEESSCCEEEEECSS--SSE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCCCCCEEEEEE
T ss_pred hCC-ceEeCCEEEEEEEcC--CeE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCCCcceEEEEE
Confidence 556 999999999999876 444 35555 4569999999999999998876555443 23445566777777789999
Q ss_pred EeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhHhhcCCCCC
Q 009646 339 WFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTA 418 (530)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~p~~~~~ 418 (530)
.++++++ . +++........+++.... ..++.++ ..+...+.+...+ + +.+.+.|++++|+..
T Consensus 291 ~~~~~~~----~--i~~~~d~~~~~~~~~~~~-----~~~~~~l-~~~~~g~~~~~~~-~---~~~~~~l~~~~~~~~-- 352 (431)
T 3k7m_X 291 HVRGAEA----G--IECVGDGIFPTLYDYCEV-----SESERLL-VAFTDSGSFDPTD-I---GAVKDAVLYYLPEVE-- 352 (431)
T ss_dssp EEESCCT----T--EEEEBSSSSSEEEEEEEC-----SSSEEEE-EEEEETTTCCTTC-H---HHHHHHHHHHCTTCE--
T ss_pred EECCCCc----C--ceEcCCCCEEEEEeCcCC-----CCCCeEE-EEEeccccCCCCC-H---HHHHHHHHHhcCCCC--
Confidence 9998873 1 222221222223332211 0223333 2333223332222 2 245667888888643
Q ss_pred ccccceEEeC------CCCceecCCCCc-ccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHH
Q 009646 419 TVMDHKIRRF------PKSLTHFFPGSY-KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 486 (530)
Q Consensus 419 ~i~~~~~~~~------~~a~~~~~~g~~-~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~ 486 (530)
+......+| .+++..+.||+. ...+....|.++|||||+.++..++ ++||||++||++||++|+-.
T Consensus 353 -~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~-g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 353 -VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFP-GYIEGALETAECAVNAILHS 425 (431)
T ss_dssp -EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHHHHHC
T ss_pred -ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCC-eEehHHHHHHHHHHHHHHhh
Confidence 332222333 234445667763 3455566788999999999987777 79999999999999999853
No 16
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.95 E-value=1.2e-26 Score=239.58 Aligned_cols=416 Identities=17% Similarity=0.138 Sum_probs=228.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc------ccccc---------ccccHHHHHHHhCCCC-
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD------ISFWY---------PFRNIFSLVDELGIKP- 108 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~------~g~~~---------~~~~~~~~~~~lg~~~- 108 (530)
..++||+|||||++||+||+.|+++|++|+|||+++++||++. .++.. ....+.++++++|++.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 3467999999999999999999999999999999999999952 12221 1345788999999862
Q ss_pred -CCCcccceeeccCCcccccc-cccCCCCCCCcccchhhhhccCCchhhhhc-cc-hhHHHhhhccCcchhhhcccCccH
Q 009646 109 -FTGWMKSAQYSEEGLEVEFP-IFQDLNQLPTPLGTLFYTQFSRLPLVDRLT-SL-PLMAAVIDFDNTDVAWRKYDSITA 184 (530)
Q Consensus 109 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~s~ 184 (530)
.........+..++...... .......+...+. .........+... .. ......... ........++..++
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~ 185 (498)
T 2iid_A 111 EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVK----PSEAGKSAGQLYEESLGKVVEELKRT-NCSYILNKYDTYST 185 (498)
T ss_dssp EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCC----GGGTTCCHHHHHHHHTHHHHHHHHHS-CHHHHHHHHTTSBH
T ss_pred eecccCCccEEEeCCeeecccccccCccccccCCC----ccccCCCHHHHHHHHHHHHHHHHhhc-cHHHHHHHhhhhhH
Confidence 11112222222222111000 0000000000000 0000000000000 00 000000000 00111234567889
Q ss_pred HHHHHHhC-CCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhcCcceeEeecCCCcchhHHHHHHHHHhcCC
Q 009646 185 RELFKQFG-CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 263 (530)
Q Consensus 185 ~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~ 263 (530)
.+|+...+ ++......+ ..++..... ...+... .+....... .......+.||+ +.|+++|.+.+..
T Consensus 186 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~---~~~~~~~~~-~~~~~~~~~gG~-~~l~~~l~~~l~~--- 253 (498)
T 2iid_A 186 KEYLIKEGDLSPGAVDMI-GDLLNEDSG---YYVSFIE---SLKHDDIFA-YEKRFDEIVDGM-DKLPTAMYRDIQD--- 253 (498)
T ss_dssp HHHHHHTSCCCHHHHHHH-HHHTTCGGG---TTSBHHH---HHHHHHHHT-TCCCEEEETTCT-THHHHHHHHHTGG---
T ss_pred HHHHHHccCCCHHHHHHH-HHhcCcccc---hhHHHHH---HHHHHhccc-cCcceEEeCCcH-HHHHHHHHHhccc---
Confidence 99999866 455443322 111111000 0111111 111111111 112234456664 5788888876653
Q ss_pred EEEcCceeeEEEecCCCCeEEEEEE-CCe----eEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEE
Q 009646 264 EFLDGRRVTDFIYDEERCCISDVVC-GKE----TYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKL 338 (530)
Q Consensus 264 ~i~~~~~V~~I~~~~~~g~v~~v~~-~~~----~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l 338 (530)
+|+++++|++|..++ +.+ .|.+ +++ ++.||+||+|+|+..+.++...++++ ....++++.+.+.+..++.+
T Consensus 254 ~i~~~~~V~~I~~~~--~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~~~~~kv~l 329 (498)
T 2iid_A 254 KVHFNAQVIKIQQND--QKV-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHYRSGTKIFL 329 (498)
T ss_dssp GEESSCEEEEEEECS--SCE-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEE
T ss_pred ccccCCEEEEEEECC--CeE-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCCcceeEEEE
Confidence 899999999999876 444 3443 333 48999999999999888776655543 33455678899999999999
Q ss_pred EeccCCCCCCCC-ceeeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhHhhcCC
Q 009646 339 WFDKKVTVPNVS-NACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDF 415 (530)
Q Consensus 339 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eei~~~~l~~L~~~~p~~ 415 (530)
.|++++|..... +.+...+.+..+.+++.. . .+.+..++...... +..+..++++++.+.++++|+++|+.
T Consensus 330 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~s~-~----~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~- 403 (498)
T 2iid_A 330 TCTTKFWEDDGIHGGKSTTDLPSRFIYYPNH-N----FTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQL- 403 (498)
T ss_dssp EESSCGGGGGTCCSSEEEESSTTCEEECCSS-C----CTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTC-
T ss_pred EeCCCCccCCCccCCcccCCCCcceEEECCC-C----CCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCC-
Confidence 999998854321 001001112122222211 1 12223343332111 23456688999999999999999962
Q ss_pred CCCcc----ccceEEeCCC------CceecCCCCcc-cCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHH
Q 009646 416 STATV----MDHKIRRFPK------SLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 484 (530)
Q Consensus 416 ~~~~i----~~~~~~~~~~------a~~~~~~g~~~-~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il 484 (530)
....+ ....+.+|.. ++..+.|+... ..+....+.++|||||++++..+ ++|+||+.||++||++|+
T Consensus 404 ~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~--g~~~GAi~SG~raA~~i~ 481 (498)
T 2iid_A 404 PKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH--GWIDSTIKSGLRAARDVN 481 (498)
T ss_dssp CHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS--SCHHHHHHHHHHHHHHHH
T ss_pred ChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC--cCHHHHHHHHHHHHHHHH
Confidence 11111 1123344432 22223444321 12233457789999999997554 589999999999999999
Q ss_pred HHhCC
Q 009646 485 DYLGD 489 (530)
Q Consensus 485 ~~~~~ 489 (530)
+.++.
T Consensus 482 ~~l~~ 486 (498)
T 2iid_A 482 LASEN 486 (498)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 99974
No 17
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.95 E-value=2.5e-27 Score=244.14 Aligned_cols=234 Identities=12% Similarity=0.143 Sum_probs=147.9
Q ss_pred eEeecCCCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC---eeEecCEEEEccChhhHHHhhhhcc
Q 009646 239 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK---ETYSAGAVVLAVGISTLQELIKNSI 315 (530)
Q Consensus 239 ~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~---~~~~ad~VV~a~~~~~~~~ll~~~~ 315 (530)
...++||+ +.|++.|++.+.+ ++|++|++|++|..++ +++.....++ +++.||+||+|+|+..+.+++++
T Consensus 231 ~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~-- 303 (489)
T 2jae_A 231 MFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQNN-- 303 (489)
T ss_dssp EEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEET--TEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEEC--
T ss_pred EEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEEEEEecCCeEEEEECCEEEECCCHHHHHhCccC--
Confidence 44566764 5788888876643 7899999999999876 5554333334 57999999999999998877652
Q ss_pred ccChHHHHhhccccceeEEEEEEEeccCCCCCCCCc--eeeccCCCccceeeeccccccccCCCCCeEEEEEecCC---C
Q 009646 316 LCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSN--ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA---N 390 (530)
Q Consensus 316 ~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 390 (530)
++ ....+.+..+.+.+..++.+.|++++|...... .+...+.+...++++ +.. +..+.+.++ ..+... .
T Consensus 304 l~-~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~-s~~---~~~~~~~l~-~~~~~g~~~~ 377 (489)
T 2jae_A 304 LP-GDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFP-YDH---YNSDRGVVV-AYYSSGKRQE 377 (489)
T ss_dssp CC-HHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECC-SSS---TTSSCEEEE-EEEEETHHHH
T ss_pred CC-HHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeC-CCC---CCCCCCEEE-EEeeCCchhh
Confidence 21 234456778888899999999999886432110 011111122222222 111 111223332 223221 2
Q ss_pred CCCCCCHHHHHHHHHHHHhHhhcC-CCCCccccceEEeCCCC------ceecC------CCCcc-cCCCCCCCCCceEEe
Q 009646 391 ELMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKS------LTHFF------PGSYK-YMMRGFTSFPNLFMA 456 (530)
Q Consensus 391 ~~~~~~~eei~~~~l~~L~~~~p~-~~~~~i~~~~~~~~~~a------~~~~~------~g~~~-~~~~~~~~~~~l~~a 456 (530)
.+..++++++.+.++++|+++||. +.. .+......+|... +..+. |+... .++...++.+|||||
T Consensus 378 ~~~~~~~~~~~~~~l~~L~~~~~~~~~~-~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~fa 456 (489)
T 2jae_A 378 AFESLTHRQRLAKAIAEGSEIHGEKYTR-DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFA 456 (489)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHCGGGGS-SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHHcCcchhh-hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEe
Confidence 345678999999999999999986 432 3444444445332 22222 44321 122334577999999
Q ss_pred eccccCCCCCCcchHHHHHHHHHHHHHHHHhC
Q 009646 457 GDWITTRHGSWSQERSYVTGLEAANRVVDYLG 488 (530)
Q Consensus 457 G~~~~~g~~~~~iega~~sG~~aA~~il~~~~ 488 (530)
|++++. ++ ++|++|+.||+++|++|++.+.
T Consensus 457 G~~~~~-~~-~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 457 GDHLSN-AI-AWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp SGGGBS-ST-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred EHHhcc-Cc-cHHHHHHHHHHHHHHHHHHHHh
Confidence 999963 44 6999999999999999998876
No 18
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.95 E-value=6.8e-26 Score=222.28 Aligned_cols=224 Identities=11% Similarity=0.089 Sum_probs=150.9
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhhhhc-cccChHHHHh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNS-ILCNREEFLK 324 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~-~~~~~~~~~~ 324 (530)
...+.+.+.+. .|++|+++++|++|+.++ +.+ .|.++ ++++.||.||+|+|+..+.+|+.+. +..+......
T Consensus 111 ~~~l~~~l~~~---~g~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~ 184 (342)
T 3qj4_A 111 ISSIIKHYLKE---SGAEVYFRHRVTQINLRD--DKW-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQ 184 (342)
T ss_dssp TTHHHHHHHHH---HTCEEESSCCEEEEEECS--SSE-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHH
T ss_pred HHHHHHHHHHh---cCCEEEeCCEEEEEEEcC--CEE-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHH
Confidence 35576666644 389999999999999876 444 35554 5568999999999999999998753 2112234556
Q ss_pred hccccceeEEEEEEEeccCCCCCCCCce-eeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHH
Q 009646 325 VLNLASIDVVSVKLWFDKKVTVPNVSNA-CSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVV 401 (530)
Q Consensus 325 ~~~l~~~~~~~v~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eei~ 401 (530)
+..+.+.++.++.+.|+++++.+.+... +..-.....|..++.+ ......++++..+.+.... ...+.+.+++++.
T Consensus 185 l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 263 (342)
T 3qj4_A 185 LEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNK-KRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQ 263 (342)
T ss_dssp HHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHH-HTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHH
T ss_pred HhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEcccc-CCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHH
Confidence 8899999999999999987665444322 2111122345444332 2111111223233222211 1345678899999
Q ss_pred HHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCC--CCCCceEEeeccccCCCCCCcchHHHHHHHHH
Q 009646 402 AKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITTRHGSWSQERSYVTGLEA 479 (530)
Q Consensus 402 ~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~--~~~~~l~~aG~~~~~g~~~~~iega~~sG~~a 479 (530)
+.++++|.+++|... .+.+..+.||+++.+.+... .++... ...++|++||||+.+ .++|+|+.||+.|
T Consensus 264 ~~~~~~l~~~~g~~~--~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g----~~v~~ai~sg~~a 334 (342)
T 3qj4_A 264 ELVFQQLENILPGLP--QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ----SNFDGCITSALCV 334 (342)
T ss_dssp HHHHHHHHHHSCSCC--CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC----SSHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCC--CCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC----CCccHHHHHHHHH
Confidence 999999999998443 46778899999999876442 122222 456899999999953 4899999999999
Q ss_pred HHHHHHH
Q 009646 480 ANRVVDY 486 (530)
Q Consensus 480 A~~il~~ 486 (530)
|++|++.
T Consensus 335 a~~i~~~ 341 (342)
T 3qj4_A 335 LEALKNY 341 (342)
T ss_dssp HHHHTTC
T ss_pred HHHHHhh
Confidence 9999864
No 19
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.95 E-value=2.1e-26 Score=238.36 Aligned_cols=402 Identities=14% Similarity=0.103 Sum_probs=204.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCCCCCcc-----cccc-------cc---cccHHHHHHHhCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGNGFGSPDD-----ISFW-------YP---FRNIFSLVDELGIKPF 109 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G-~~V~vlE~~~~~GG~~~-----~g~~-------~~---~~~~~~~~~~lg~~~~ 109 (530)
.++||+|||||++||+||+.|+++| ++|+|||+++++||++. .|+. .. ...+.+++.++++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~ 86 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDG 86 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCc
Confidence 4579999999999999999999999 99999999999999953 2322 11 2235666677765311
Q ss_pred CCcccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccc-hhHHHhhhccCcchhhhcccCccHHHHH
Q 009646 110 TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSL-PLMAAVIDFDNTDVAWRKYDSITARELF 188 (530)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~l 188 (530)
.. ..+..++..... ..+...+.... ...+....... ...... +. .....++.++.+++
T Consensus 87 ~~----~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~----~~~~~~d~s~~~~l 145 (516)
T 1rsg_A 87 RT----RFVFDDDNFIYI--DEERGRVDHDK---------ELLLEIVDNEMSKFAELE--FH----QHLGVSDCSFFQLV 145 (516)
T ss_dssp CC----CEECCCCCCEEE--ETTTEECTTCT---------TTCHHHHHHHHHHHHHHH--C-----------CCBHHHHH
T ss_pred ce----eEEECCCCEEEE--cCCCccccccH---------HHHHHHHHHHHHHHHHHH--hh----hccCCCCCCHHHHH
Confidence 00 001111100000 00000000000 00000000000 000000 00 00112456777766
Q ss_pred HHh------CCCHHHHHHhhhhh---hhhhcCCCchhchHHHHHHHHHHHHHhhcCcceeEeecCCCcchhHHHHHHHHH
Q 009646 189 KQF------GCSERLYRNVIGPL---VQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMR 259 (530)
Q Consensus 189 ~~~------g~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~~~~~~gg~~~~l~~~l~~~l~ 259 (530)
.+. .+.+.. ..++..+ .....+.+..++++.... ... .....++.+ .+.+++.|.+.+.
T Consensus 146 ~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~--------~~~-~~~~~~~~g--~~~l~~~l~~~l~ 213 (516)
T 1rsg_A 146 MKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTY--------FGH-QGRNAFALN--YDSVVQRIAQSFP 213 (516)
T ss_dssp HHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHC--------CCC-SSCCEEESC--HHHHHHHHHTTSC
T ss_pred HHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHH--------hhc-cCcchhhhC--HHHHHHHHHHhCC
Confidence 542 122211 1111111 112234455566654321 011 111223444 4566666654433
Q ss_pred hcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHh-----------hhhccccChHHHHhhcc
Q 009646 260 TRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQEL-----------IKNSILCNREEFLKVLN 327 (530)
Q Consensus 260 ~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~l-----------l~~~~~~~~~~~~~~~~ 327 (530)
+++|++|++|++|..++ ++. +.|.+. |+++.||+||+|+|+..++.. ...++++ ....++++.
T Consensus 214 --~~~i~~~~~V~~I~~~~-~~~-v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp-~~~~~ai~~ 288 (516)
T 1rsg_A 214 --QNWLKLSCEVKSITREP-SKN-VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLK-PVIQDAFDK 288 (516)
T ss_dssp --GGGEETTCCEEEEEECT-TSC-EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCC-HHHHHHTTS
T ss_pred --CCEEEECCEEEEEEEcC-CCe-EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCC-HHHHHHHHh
Confidence 36899999999999863 133 356665 557999999999999998743 2233332 344567889
Q ss_pred ccceeEEEEEEEeccCCCCCCCCceeeccCCCc--------------------------------cceeeeccccccccC
Q 009646 328 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSL--------------------------------AWTFFDLNKIYDEHK 375 (530)
Q Consensus 328 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~ 375 (530)
+.+.++.|+.+.|++++|...... +.+..... .|. +. ......+.
T Consensus 289 ~~~~~~~Kv~l~f~~~fW~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 365 (516)
T 1rsg_A 289 IHFGALGKVIFEFEECCWSNESSK-IVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWS-QP-LFFVNLSK 365 (516)
T ss_dssp SCCCCCEEEEEEESSCCSCCSCSE-EEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTS-SC-EEEEEHHH
T ss_pred CCCCcceEEEEEeCCCCCCCCCCc-EEEeCCCCccchhhcccCcccchhhhccccccccccccccccc-Cc-eeEEEeee
Confidence 999999999999999998654322 22211100 010 00 00000000
Q ss_pred CCCCeEEEEEecCC--CCCCCC--CHHHHHHH---HHHHHhHhhc------CCCCC-------ccc--cceEEeCC----
Q 009646 376 DDSATVIQADFYHA--NELMPL--KDDQVVAK---AVSYLSKCIK------DFSTA-------TVM--DHKIRRFP---- 429 (530)
Q Consensus 376 ~~~~~~~~~~~~~~--~~~~~~--~~eei~~~---~l~~L~~~~p------~~~~~-------~i~--~~~~~~~~---- 429 (530)
..+..++.....+. ..+..+ +++++.+. +++.+.++|+ ++..+ .+. .....+|.
T Consensus 366 ~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~ 445 (516)
T 1rsg_A 366 STGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPY 445 (516)
T ss_dssp HTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTT
T ss_pred cCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCC
Confidence 11222332212221 112233 67777654 5666666553 22211 011 33333442
Q ss_pred --CCceecCCCCccc--CCCC-CCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhCC
Q 009646 430 --KSLTHFFPGSYKY--MMRG-FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 489 (530)
Q Consensus 430 --~a~~~~~~g~~~~--~~~~-~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~~ 489 (530)
+++..+.||.... .... ..+.++|||||++++..++ ++|+||++||++||++|++.++.
T Consensus 446 ~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~-g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 446 SRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGA-GCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp TTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTB-TSHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCC-ccchhHHHHHHHHHHHHHHHhhh
Confidence 2333345665221 1111 1356899999999988677 79999999999999999998763
No 20
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.94 E-value=3.2e-26 Score=243.96 Aligned_cols=213 Identities=16% Similarity=0.192 Sum_probs=137.2
Q ss_pred CCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHh--hhhccccChHHHHhhccccceeEEEEEE
Q 009646 262 GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQEL--IKNSILCNREEFLKVLNLASIDVVSVKL 338 (530)
Q Consensus 262 G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~l--l~~~~~~~~~~~~~~~~l~~~~~~~v~l 338 (530)
|++|+++++|++|+.++ +.+. |.+. |+++.||+||+|+|+..+++. ...++++ ......+..+.+.++.++.+
T Consensus 543 gl~I~l~t~V~~I~~~~--~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp-~~~~~ai~~l~~g~~~KV~l 618 (776)
T 4gut_A 543 GLDIQLKSPVQCIDYSG--DEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLS-EKKMKAINSLGAGIIEKIAL 618 (776)
T ss_dssp TSCEESSCCEEEEECSS--SSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESCCC-HHHHHHHHHEEEECCEEEEE
T ss_pred CCcEEcCCeeEEEEEcC--CEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCCCC-HHHHHHHHhCCCeeEEEEEE
Confidence 78999999999999876 4444 5554 558999999999999998752 2333332 34455678888888999999
Q ss_pred EeccCCCCCCC-CceeeccCCC----ccc--eeeeccccccccCCCCCeEEEEEecCC--CCCCCCCHHHHHHHHHHHHh
Q 009646 339 WFDKKVTVPNV-SNACSGFGDS----LAW--TFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLKDDQVVAKAVSYLS 409 (530)
Q Consensus 339 ~~~~~~~~~~~-~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~eei~~~~l~~L~ 409 (530)
.|++++|.... ...+++.... .++ .+++.. ......++...+.+. ..+..++++++++.++++|.
T Consensus 619 ~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~------p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~ 692 (776)
T 4gut_A 619 QFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD------PQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLR 692 (776)
T ss_dssp ECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC------TTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred ecCcccccccCCCCceEEeecCCcCCCceEEEEecCC------CCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHH
Confidence 99999985321 1112222111 111 122221 111223433322221 23456889999999999999
Q ss_pred HhhcCCCCCccccceEEeCC------CCceecCCCCcc-cCCCCCCC-CCceEEeeccccCCCCCCcchHHHHHHHHHHH
Q 009646 410 KCIKDFSTATVMDHKIRRFP------KSLTHFFPGSYK-YMMRGFTS-FPNLFMAGDWITTRHGSWSQERSYVTGLEAAN 481 (530)
Q Consensus 410 ~~~p~~~~~~i~~~~~~~~~------~a~~~~~~g~~~-~~~~~~~~-~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~ 481 (530)
++|+......+....+.+|. +++....+|... .......+ .++|||||++++..++ ++||||++||.++|+
T Consensus 693 ~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~-gtveGAi~SG~RaA~ 771 (776)
T 4gut_A 693 ELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFP-QTVTGAYLSGVREAS 771 (776)
T ss_dssp HHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSC-SSHHHHHHHHHHHHH
T ss_pred HHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCC-cCHHHHHHHHHHHHH
Confidence 99985332234444444442 233334455421 11122234 4789999999998787 799999999999999
Q ss_pred HHHH
Q 009646 482 RVVD 485 (530)
Q Consensus 482 ~il~ 485 (530)
+|++
T Consensus 772 ~Ila 775 (776)
T 4gut_A 772 KIAA 775 (776)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9984
No 21
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.94 E-value=1e-24 Score=220.61 Aligned_cols=391 Identities=15% Similarity=0.158 Sum_probs=208.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCCCCCcc----cccc---------cccccHHHHHHHhCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGNGFGSPDD----ISFW---------YPFRNIFSLVDELGIKPFTG 111 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G-~~V~vlE~~~~~GG~~~----~g~~---------~~~~~~~~~~~~lg~~~~~~ 111 (530)
.++||+|||||++||+||++|+++| ++|+|+|+++++||++. .|+. ..++.+.++++++|++....
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~~ 84 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDGP 84 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCccccc
Confidence 4589999999999999999999999 99999999999999943 2221 23567889999999873221
Q ss_pred cccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhh-hcc--CcchhhhcccCccHHHHH
Q 009646 112 WMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVI-DFD--NTDVAWRKYDSITARELF 188 (530)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~s~~~~l 188 (530)
......+..++...... ..+.... ....... . ....+.... .+. ............++.+|+
T Consensus 85 ~~~~~~~~~~g~~~~~~------~~~~~~~-~~~~~~~------~--l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 149 (424)
T 2b9w_A 85 KLRREFLHEDGEIYVPE------KDPVRGP-QVMAAVQ------K--LGQLLATKYQGYDANGHYNKVHEDLMLPFDEFL 149 (424)
T ss_dssp CCCEEEECTTSCEECGG------GCTTHHH-HHHHHHH------H--HHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHH
T ss_pred cccceeEcCCCCEeccc------cCcccch-hHHHHHH------H--HHHHHhhhhhhcccccchhhhhhhhccCHHHHH
Confidence 11111222232211000 0000000 0000000 0 000000000 000 000001123457999999
Q ss_pred HHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHH---HhhcCcceeEeecCCCcchhHHHHHHHHHhcCCEE
Q 009646 189 KQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 265 (530)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~---~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i 265 (530)
++.+.+. +.+.++.+++...++ ++.++++...+..+.... ..... .....+| .+.+++.+.+ ..+.+|
T Consensus 150 ~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~~~~g-~~~l~~~l~~---~l~~~v 220 (424)
T 2b9w_A 150 ALNGCEA-ARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGD---LWTWADG-TQAMFEHLNA---TLEHPA 220 (424)
T ss_dssp HHTTCGG-GHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTC---CBCCTTC-HHHHHHHHHH---HSSSCC
T ss_pred HhhCcHH-HHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCc---eEEeCCh-HHHHHHHHHH---hhcceE
Confidence 9987654 566666776654443 557777765432221110 11111 1223444 4567776664 346789
Q ss_pred EcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEeccCCC
Q 009646 266 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT 345 (530)
Q Consensus 266 ~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~ 345 (530)
+++++|++|..++ +++. |.++++++.||.||+|+|++.+.++++.. ....+.+..+.+.++. +.+.+...+.
T Consensus 221 ~~~~~V~~i~~~~--~~v~-v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~ 292 (424)
T 2b9w_A 221 ERNVDITRITRED--GKVH-IHTTDWDRESDVLVLTVPLEKFLDYSDAD----DDEREYFSKIIHQQYM-VDACLVKEYP 292 (424)
T ss_dssp BCSCCEEEEECCT--TCEE-EEESSCEEEESEEEECSCHHHHTTSBCCC----HHHHHHHTTCEEEEEE-EEEEEESSCC
T ss_pred EcCCEEEEEEEEC--CEEE-EEECCCeEEcCEEEECCCHHHHhhccCCC----HHHHHHHhcCCcceeE-EEEEEeccCC
Confidence 9999999999876 5554 77776679999999999999887665432 1222233455554432 2223333321
Q ss_pred CCCCCceeeccC---CCccceeeeccccccccCCCC-CeEEEEEecCCCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccc
Q 009646 346 VPNVSNACSGFG---DSLAWTFFDLNKIYDEHKDDS-ATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 421 (530)
Q Consensus 346 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~ 421 (530)
. ...+.... ...++.+++.... .+.. ..+..........+...+++++.+.++++|.++.++.. .+.
T Consensus 293 --~-~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~~~--~~~ 363 (424)
T 2b9w_A 293 --T-ISGYVPDNMRPERLGHVMVYYHRW----ADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHPVE--KII 363 (424)
T ss_dssp --S-SEEECGGGGSGGGTTSCCEEEECC----TTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCCEE--EEE
T ss_pred --c-ccccccCCCCCcCCCcceEEeeec----CCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCccc--ccc
Confidence 1 11111111 0112223322211 1112 22222211112234567788999999999999654321 121
Q ss_pred cceEEeCC----CCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHH
Q 009646 422 DHKIRRFP----KSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 484 (530)
Q Consensus 422 ~~~~~~~~----~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il 484 (530)
.. ..|. .+...+..|.... .....+.+|+||||+|++ + +.+|+|+.||++||+.|+
T Consensus 364 ~~--~~w~~~p~~~~~~~~~G~~~~-~~~~~~~~~l~~aG~~~~--~--g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 364 EE--QTWYYFPHVSSEDYKAGWYEK-VEGMQGRRNTFYAGEIMS--F--GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EE--EEEEEEEECCHHHHHTTHHHH-HHHTTTGGGEEECSGGGS--C--SSHHHHHHHHHHHHHHHT
T ss_pred cc--cceeeeeccCHHHHhccHHHH-HHHHhCCCCceEeccccc--c--ccHHHHHHHHHHHHHHhc
Confidence 11 1121 1111223332211 112234579999999984 4 479999999999999885
No 22
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.93 E-value=3.1e-24 Score=229.94 Aligned_cols=227 Identities=18% Similarity=0.204 Sum_probs=150.2
Q ss_pred ecCCCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-C------CeeEecCEEEEccChhhHHHhh---
Q 009646 242 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI--- 311 (530)
Q Consensus 242 ~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~------~~~~~ad~VV~a~~~~~~~~ll--- 311 (530)
..||+ +.|+++|.+ +.+|++|++|++|..++ +.+. |.+ + ++++.||+||+|+|+..+++++
T Consensus 567 ~~gG~-~~L~~aLa~-----~l~I~Lnt~V~~I~~~~--~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I 637 (852)
T 2xag_A 567 VRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTA--SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 637 (852)
T ss_dssp ETTCT-THHHHHHTT-----TCCEECSEEEEEEEEET--TEEE-EEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred ecCcH-HHHHHHHHh-----CCCEEeCCeEEEEEEcC--CcEE-EEEeecccCCCCeEEECCEEEECCCHHHHHhhhccc
Confidence 45664 456665552 46899999999999987 4443 333 2 3589999999999999998742
Q ss_pred -hhccccChHHHHhhccccceeEEEEEEEeccCCCCCCCCceeeccC-C-----CccceeeeccccccccCCCCCeEEEE
Q 009646 312 -KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG-D-----SLAWTFFDLNKIYDEHKDDSATVIQA 384 (530)
Q Consensus 312 -~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (530)
+.++++ .....+++.+.+.++.++.+.|++++|..... ++++. . ....++++.. ...++..
T Consensus 638 ~F~P~LP-~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~--~fG~l~~~~~~~~~l~~~~~~~---------~~pvLl~ 705 (852)
T 2xag_A 638 QFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVN--LFGHVGSTTASRGELFLFWNLY---------KAPILLA 705 (852)
T ss_dssp EEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCTTCC--EEEECCSSSTTTTTTCEEEECS---------SSSEEEE
T ss_pred ccCCCCC-HHHHHHHHcCCccceEEEEEEcCCcccCCCCC--eeeeeccccCCCCceEEEecCC---------CCCEEEE
Confidence 334443 23345688899999999999999999854221 22211 1 1112233221 1223322
Q ss_pred EecC--CCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCC------CceecCCCCccc------CC------
Q 009646 385 DFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK------SLTHFFPGSYKY------MM------ 444 (530)
Q Consensus 385 ~~~~--~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~------a~~~~~~g~~~~------~~------ 444 (530)
.+.+ +..+..++++++++.++++|.++|+......+....+.+|.. ++..+.||.... .|
T Consensus 706 ~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~ 785 (852)
T 2xag_A 706 LVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPS 785 (852)
T ss_dssp EECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCS
T ss_pred EecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccc
Confidence 2221 123456889999999999999999764323455556666644 444556665321 11
Q ss_pred --CCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhCCC
Q 009646 445 --RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDG 490 (530)
Q Consensus 445 --~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~~~ 490 (530)
....+.++|||||++++..++ ++||||+.||++||++|++.+...
T Consensus 786 ~p~~~~~~grL~FAGE~Ts~~~~-gtveGAi~SG~RAA~~Il~~l~~~ 832 (852)
T 2xag_A 786 IPGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFLGA 832 (852)
T ss_dssp STTCCCCCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccccCCCCcEEEEehhHhCCCC-cCHHHHHHHHHHHHHHHHHHhhCC
Confidence 123455799999999998777 799999999999999999998753
No 23
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.93 E-value=3e-24 Score=227.59 Aligned_cols=226 Identities=18% Similarity=0.214 Sum_probs=147.9
Q ss_pred ecCCCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-C------CeeEecCEEEEccChhhHHHh----
Q 009646 242 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQEL---- 310 (530)
Q Consensus 242 ~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~------~~~~~ad~VV~a~~~~~~~~l---- 310 (530)
..||+ +.|+++|. + +.+|++|++|++|..++ +.+ .|.+ + ++++.||+||+|+|+..++++
T Consensus 396 ~~gG~-~~l~~~La----~-~l~I~l~~~V~~I~~~~--~~v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i 466 (662)
T 2z3y_A 396 VRNGY-SCVPVALA----E-GLDIKLNTAVRQVRYTA--SGC-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 466 (662)
T ss_dssp ETTCT-THHHHHHT----T-TCEEETTEEEEEEEEET--TEE-EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred ecCcH-HHHHHHHH----h-cCceecCCeEEEEEECC--CcE-EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCce
Confidence 34554 45666555 2 56999999999999987 433 3333 2 357999999999999999874
Q ss_pred hhhccccChHHHHhhccccceeEEEEEEEeccCCCCCCCCceeeccCC---Ccc--ceeeeccccccccCCCCCeEEEEE
Q 009646 311 IKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD---SLA--WTFFDLNKIYDEHKDDSATVIQAD 385 (530)
Q Consensus 311 l~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 385 (530)
.+.++++ ....++++.+.+.++.|+.+.|++++|..... .+..... ..+ ..+++.. +..++...
T Consensus 467 ~f~P~LP-~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~-~~G~l~~~~~~~~~~~~~~~~~---------~~~vL~~~ 535 (662)
T 2z3y_A 467 QFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVN-LFGHVGSTTASRGELFLFWNLY---------KAPILLAL 535 (662)
T ss_dssp EEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCTTCS-EEEECCSSSTTTTEEEEEECCS---------SSSEEEEE
T ss_pred EEcCCCC-HHHHHHHHhCCccceeEEEEEcCcccccCCCC-ceeeecCCCCCCCceeEEEeCC---------CCCEEEEE
Confidence 2444443 23445688899999999999999999854321 2211111 111 1222211 12233322
Q ss_pred ecCC--CCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCC------CceecCCCCccc------CC-------
Q 009646 386 FYHA--NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK------SLTHFFPGSYKY------MM------- 444 (530)
Q Consensus 386 ~~~~--~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~------a~~~~~~g~~~~------~~------- 444 (530)
+.+. ..+..++++++++.++++|.++|+......+....+.+|.. ++..+.||.... .|
T Consensus 536 ~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~ 615 (662)
T 2z3y_A 536 VAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSI 615 (662)
T ss_dssp ECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC----
T ss_pred eccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccc
Confidence 2221 23456889999999999999999764323455555666643 344456665321 11
Q ss_pred -CCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhC
Q 009646 445 -RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 488 (530)
Q Consensus 445 -~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~ 488 (530)
....+.++|||||++++..++ ++||||+.||++||++|++.++
T Consensus 616 ~~~~~~~grl~FAGe~ts~~~~-g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 616 PGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp -----CCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCcEEEEeccccCCCC-cCHHHHHHHHHHHHHHHHHHcc
Confidence 113355899999999998777 7999999999999999999876
No 24
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.91 E-value=2e-23 Score=217.48 Aligned_cols=253 Identities=11% Similarity=0.031 Sum_probs=151.8
Q ss_pred eeEeecCCCcchhHHHHHHHHHhcCCEEEcCceee--EEEecCCCC------eEEEE-EEC-Ce--eEecCEEEEccChh
Q 009646 238 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVT--DFIYDEERC------CISDV-VCG-KE--TYSAGAVVLAVGIS 305 (530)
Q Consensus 238 ~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~--~I~~~~~~g------~v~~v-~~~-~~--~~~ad~VV~a~~~~ 305 (530)
+...+.|| +++|.++|++.+.+ |++|+++++|+ +|.+++ ++ .| .| ... |+ ++.||+||+|+|..
T Consensus 338 ~~~~i~GG-~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V-~V~~~~~G~~~~~~aD~VIvTvP~~ 413 (721)
T 3ayj_A 338 EYTLPVTE-NVEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQ-LLSYDSHNAVHSEAYDFVILAVPHD 413 (721)
T ss_dssp EECCSSSS-THHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEE-EEEEETTCCEEEEEESEEEECSCHH
T ss_pred ceeEECCc-HHHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceE-EEEEecCCceEEEEcCEEEECCCHH
Confidence 34445566 46799999987643 67889999999 999875 33 23 34 333 44 78999999999999
Q ss_pred hHHHhh-------------h--------------hcccc-C-------hHHHHhhccccceeEEEEEEEe-----ccCCC
Q 009646 306 TLQELI-------------K--------------NSILC-N-------REEFLKVLNLASIDVVSVKLWF-----DKKVT 345 (530)
Q Consensus 306 ~~~~ll-------------~--------------~~~~~-~-------~~~~~~~~~l~~~~~~~v~l~~-----~~~~~ 345 (530)
.+..++ . .+++- . .....+++.+.+.+..|+.+.| +++||
T Consensus 414 ~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW 493 (721)
T 3ayj_A 414 QLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWV 493 (721)
T ss_dssp HHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTS
T ss_pred HHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcc
Confidence 986422 1 12211 2 3455678999999999999999 89998
Q ss_pred CCCCCc-e-eeccCCCcccee-eeccccccccCCCCCeEEEEEecCC---CCC------CCCCHH-------HHHHHHHH
Q 009646 346 VPNVSN-A-CSGFGDSLAWTF-FDLNKIYDEHKDDSATVIQADFYHA---NEL------MPLKDD-------QVVAKAVS 406 (530)
Q Consensus 346 ~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~e-------ei~~~~l~ 406 (530)
...... + ..--+.+....+ +...+.. .+.+....++.+.|... ..+ ..++++ ++++.+++
T Consensus 494 ~~~~g~~i~~s~TD~~~r~~~~~p~p~~~-d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~ 572 (721)
T 3ayj_A 494 PQWRGEPIKAVVSDSGLAASYVVPSPIVE-DGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVN 572 (721)
T ss_dssp CEETTEECCEEEETTTTEEEEEEECSCC-----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHH
T ss_pred cccCCCCceeeecCCCcceEEEeccCccc-ccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHH
Confidence 654111 0 110111221111 1111100 11122233444444321 112 223333 44899999
Q ss_pred HHh--HhhcCCC-----------CCc-cccceEEeC-----CCCceecCCCCc-------ccC--CCCCCCCCceEEeec
Q 009646 407 YLS--KCIKDFS-----------TAT-VMDHKIRRF-----PKSLTHFFPGSY-------KYM--MRGFTSFPNLFMAGD 458 (530)
Q Consensus 407 ~L~--~~~p~~~-----------~~~-i~~~~~~~~-----~~a~~~~~~g~~-------~~~--~~~~~~~~~l~~aG~ 458 (530)
++. +++|+.. ... ..+.....| .+++..+.||+. ... .....+.++||||||
T Consensus 573 ~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe 652 (721)
T 3ayj_A 573 RAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASD 652 (721)
T ss_dssp HTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSG
T ss_pred HHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeeh
Confidence 999 8998754 100 112222223 344556778872 111 112345689999999
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHHHHhCCCCcccccc
Q 009646 459 WITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIP 497 (530)
Q Consensus 459 ~~~~g~~~~~iega~~sG~~aA~~il~~~~~~~~~~~~~ 497 (530)
+++. ++ +|+|||+.||.+||..|+..++.+......+
T Consensus 653 ~~S~-~~-GWieGAl~Sa~~Aa~~i~~~~~~~~~~~~~~ 689 (721)
T 3ayj_A 653 SYSH-LG-GWLEGAFMSALNAVAGLIVRANRGDVSALST 689 (721)
T ss_dssp GGSS-CT-TSHHHHHHHHHHHHHHHHHHHTTTCGGGBCT
T ss_pred hhcc-CC-ceehHHHHHHHHHHHHHHHHhcCCCCcccCc
Confidence 9984 55 7999999999999999999998765543333
No 25
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.88 E-value=6.4e-20 Score=186.17 Aligned_cols=383 Identities=10% Similarity=0.078 Sum_probs=199.5
Q ss_pred cCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----cc-cc-c---------------------
Q 009646 40 TNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----IS-FW-Y--------------------- 92 (530)
Q Consensus 40 ~~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g-~~-~--------------------- 92 (530)
.|+..+.++||||||||++||+||+.|+++|++|+|||+++++||+.. .| |. +
T Consensus 4 ~~~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~ 83 (453)
T 2bcg_G 4 DQETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWN 83 (453)
T ss_dssp ---CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCC
T ss_pred chhhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhccccccee
Confidence 344455678999999999999999999999999999999999999943 33 21 1
Q ss_pred ---------ccccHHHHHHHhCCCCCCCcccc--eeeccCCcccccccccCCCCCCCc-ccchhhhhccCCchhhhhccc
Q 009646 93 ---------PFRNIFSLVDELGIKPFTGWMKS--AQYSEEGLEVEFPIFQDLNQLPTP-LGTLFYTQFSRLPLVDRLTSL 160 (530)
Q Consensus 93 ---------~~~~~~~~~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (530)
....+.++++++|+..+..+... .....++... .++.. .... ........++....
T Consensus 84 ~~l~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~---------~~p~~~~~~~---~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 84 VDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIY---------KVPANEIEAI---SSPLMGIFEKRRMK 151 (453)
T ss_dssp EESSCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEE---------ECCSSHHHHH---HCTTSCHHHHHHHH
T ss_pred eccccceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEE---------ECCCChHHHH---hhhccchhhHHHHH
Confidence 12357788899988643333221 1111222111 11111 0000 00011111222222
Q ss_pred hhHHHhhhccCc-chhhh--cccCccHHHHHHHhCCCHHHHHHhhhhhhhhhcCC-CchhchHHHHHHHHHHHH--Hhhc
Q 009646 161 PLMAAVIDFDNT-DVAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFA-PAEQCSAAATLGILYFII--LAHQ 234 (530)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~--~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~l~~~~--~~~~ 234 (530)
+.+.....+... ...+. .....++.+|+++++.++.+..-+..... .... +....+.......+..+. ....
T Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~--l~~~~~~~~~p~~~~~~~~~~~~~s~~~~ 229 (453)
T 2bcg_G 152 KFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMA--LWTNDDYLQQPARPSFERILLYCQSVARY 229 (453)
T ss_dssp HHHHHHHHCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTS--CCSSSGGGGSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchhhhccccccCCHHHHHHHhCCCHHHHHHHHHHHH--hccCccccCCchHHHHHHHHHHHHHHHhh
Confidence 222222221111 11111 23567999999998887775443222211 1110 011111211111111111 1111
Q ss_pred CcceeEeecCCCcchhHHHHHHHHHhcCCEEEcCceeeEEEec--CCCCeEEEEEECCeeEecCEEEEccChhhHHHhhh
Q 009646 235 KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGISTLQELIK 312 (530)
Q Consensus 235 ~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~--~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~ 312 (530)
......++.||. ..++++|.+.+++.|++|+++++|++|..+ + +++++|.++++++.||.||+|++++..
T Consensus 230 ~~~~~~~p~gG~-~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~ad~VV~a~~~~~~----- 301 (453)
T 2bcg_G 230 GKSPYLYPMYGL-GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKAPLVIADPTYFPE----- 301 (453)
T ss_dssp SSCSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEECSCEEECGGGCGG-----
T ss_pred cCCceEeeCCCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEECCEEEECCCccch-----
Confidence 122234778875 579999999999999999999999999987 6 777788888889999999999998721
Q ss_pred hccccChHHHHhhccccceeEEEEEEEeccCCCCC---CCCceeeccCC--CccceeeeccccccccCCCCCeEEEEEec
Q 009646 313 NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP---NVSNACSGFGD--SLAWTFFDLNKIYDEHKDDSATVIQADFY 387 (530)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (530)
.+..+.. ......+.+++++... ..+.++..-.. .....++...+..+...|++.+++.+...
T Consensus 302 -----------~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~ 369 (453)
T 2bcg_G 302 -----------KCKSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTI 369 (453)
T ss_dssp -----------GEEEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEE
T ss_pred -----------hhcccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEe
Confidence 1111110 1111122267665321 11122221110 11122222222222445666665544332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCC
Q 009646 388 HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSW 467 (530)
Q Consensus 388 ~~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~ 467 (530)
.+. ...++ ++...++++.|... .... +.. . +.|- .....+|+|++|++-.+ .
T Consensus 370 ~~~----~~~~~---~l~~~~~~l~~~~~--~~~~--~~~----~--~~~~-------~~~~~~~~~~~~~~~~~----~ 421 (453)
T 2bcg_G 370 IET----DKPHI---ELEPAFKLLGPIEE--KFMG--IAE----L--FEPR-------EDGSKDNIYLSRSYDAS----S 421 (453)
T ss_dssp CCS----SCHHH---HTHHHHGGGCSCSE--EEEE--EEE----E--EEES-------SCSTTTSEEECCCCCSC----S
T ss_pred cCC----CCHHH---HHHHHHHHhhhHHH--hhcc--chh----e--eeec-------CCCCCCCEEECCCCCcc----c
Confidence 221 12222 23344455544321 1111 110 1 1111 11223799999998753 4
Q ss_pred cchHHHHHHHHHHHHHH
Q 009646 468 SQERSYVTGLEAANRVV 484 (530)
Q Consensus 468 ~iega~~sG~~aA~~il 484 (530)
.+|+++.+++.++++|+
T Consensus 422 ~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 422 HFESMTDDVKDIYFRVT 438 (453)
T ss_dssp BSHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 68999999999999998
No 26
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.88 E-value=6.3e-21 Score=186.49 Aligned_cols=215 Identities=15% Similarity=0.121 Sum_probs=139.4
Q ss_pred HHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeE-ecCEEEEccChhhHHHhhhhccccChHHHHhhccccce
Q 009646 254 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETY-SAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 331 (530)
Q Consensus 254 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~-~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~ 331 (530)
+.+.+.+ |++|+++++|++|+.++ +.+ .|.++ +..+ .||.||+|+|+..+.+++...+ .....+..+.+.
T Consensus 112 l~~~l~~-g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~----~l~~~~~~~~~~ 183 (336)
T 1yvv_A 112 ITRAMRG-DMPVSFSCRITEVFRGE--EHW-NLLDAEGQNHGPFSHVIIATPAPQASTLLAAAP----KLASVVAGVKMD 183 (336)
T ss_dssp HHHHHHT-TCCEECSCCEEEEEECS--SCE-EEEETTSCEEEEESEEEECSCHHHHGGGGTTCH----HHHHHHTTCCEE
T ss_pred HHHHHHc-cCcEEecCEEEEEEEeC--CEE-EEEeCCCcCccccCEEEEcCCHHHHHHhhccCH----HHHHHHhhcCcc
Confidence 3444333 89999999999999876 444 35555 4444 4899999999998888775421 233456778888
Q ss_pred eEEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEe-cCCCCCCCCCHHHHHHHHHHHHhH
Q 009646 332 DVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADF-YHANELMPLKDDQVVAKAVSYLSK 410 (530)
Q Consensus 332 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~eei~~~~l~~L~~ 410 (530)
+..++.+.++++++.+.. ..+. .+.+..| +++.+.. +...+.+..++.... .....+...+++++.+++++.+.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~-l~~~~~~-p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (336)
T 1yvv_A 184 PTWAVALAFETPLQTPMQ-GCFV-QDSPLDW-LARNRSK-PERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAE 259 (336)
T ss_dssp EEEEEEEEESSCCSCCCC-EEEE-CSSSEEE-EEEGGGS-TTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHT
T ss_pred ceeEEEEEecCCCCCCCC-eEEe-CCCceeE-EEecCcC-CCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 888999999988764332 2222 2233344 3333321 111111112222211 012345668899999999999999
Q ss_pred hhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHhCC
Q 009646 411 CIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 489 (530)
Q Consensus 411 ~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~~~ 489 (530)
+++.. ...+....+.+|.++.+.+..+.. ....+.++|++|||++++ .+||+|+.||+++|+.|++.+..
T Consensus 260 ~lg~~-~~~p~~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g----~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 260 LIDCT-MPAPVFSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLS----GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TCSSC-CCCCSEEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTT----SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhCCC-CCCCcEEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCC----CCHHHHHHHHHHHHHHHHHHhhh
Confidence 99642 123444566778777666554432 112345899999999963 48999999999999999999873
No 27
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.83 E-value=1.2e-17 Score=168.19 Aligned_cols=378 Identities=9% Similarity=0.071 Sum_probs=202.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc--c----c-------------------ccc--------
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD--I----S-------------------FWY-------- 92 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~--~----g-------------------~~~-------- 92 (530)
..+||+|||||++||++|+.|+++|++|+|+|+++++||+.. . | |..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 458999999999999999999999999999999999999943 2 1 111
Q ss_pred ccccHHHHHHHhCCCCCCCcccc-eee-ccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhcc
Q 009646 93 PFRNIFSLVDELGIKPFTGWMKS-AQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 170 (530)
Q Consensus 93 ~~~~~~~~~~~lg~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (530)
....+.++++++|+.....+... ..+ ..++... .++......+.. ......++....+.+.....+.
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~---------~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 153 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIY---------KVPSTETEALAS--NLMGMFEKRRFRKFLVFVANFD 153 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEE---------ECCCSHHHHHHC--SSSCHHHHHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEE---------ECCCCHHHHhhC--cccChhhHHHHHHHHHHHHhhc
Confidence 12346788999998744332221 111 1222111 111111000000 0111112212222222222221
Q ss_pred Ccch---hhhcccCccHHHHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHh--hcCcceeEeecCC
Q 009646 171 NTDV---AWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA--HQKNFDLVWCRGT 245 (530)
Q Consensus 171 ~~~~---~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~--~~~~~~~~~~~gg 245 (530)
...+ .+......++.+|+++++.++.+... +...+....+.++.+.++......+..+... ..+.....++.||
T Consensus 154 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~-l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG 232 (433)
T 1d5t_A 154 ENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDF-TGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYG 232 (433)
T ss_dssp TTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHHH-HHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTC
T ss_pred ccCchhccccccccCCHHHHHHHcCCCHHHHHH-HHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcC
Confidence 1110 11134678999999998887765443 3222112222333444444322222222221 1222335678887
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 325 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~ 325 (530)
. ..++++|.+.+++.|++|+++++|++|..++ +++++|.++++++.||.||+|+|++.. .+
T Consensus 233 ~-~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~a~~~~~~--~~-------------- 293 (433)
T 1d5t_A 233 L-GELPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLICDPSYVPD--RV-------------- 293 (433)
T ss_dssp T-THHHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEECGGGCGG--GE--------------
T ss_pred H-HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEECCCCCcc--cc--------------
Confidence 4 6799999999999999999999999999876 777778888889999999999998842 11
Q ss_pred ccccceeEEEEEEEeccCCCCC---CCCceeeccCC--CccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHH
Q 009646 326 LNLASIDVVSVKLWFDKKVTVP---NVSNACSGFGD--SLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQV 400 (530)
Q Consensus 326 ~~l~~~~~~~v~l~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei 400 (530)
..+... ...+.+ +++++... ..+.++..-.. .....++...+.++...|++.+++.+....+. ...+
T Consensus 294 ~~~~~~-~~~~~i-l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~d~~~aP~G~~~~~~~~~~p~----~~~~-- 365 (433)
T 1d5t_A 294 RKAGQV-IRIICI-LSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVET----TDPE-- 365 (433)
T ss_dssp EEEEEE-EEEEEE-ESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCS----SCHH--
T ss_pred cccCcc-eeEEEE-EcCcccccCCCceEEEEeCccccCCCCCEEEEEECCCCcccCCCCEEEEEEEecCC----CCHH--
Confidence 011111 111222 66665321 12222221110 11112222222445556666666544332221 1222
Q ss_pred HHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHH
Q 009646 401 VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAA 480 (530)
Q Consensus 401 ~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA 480 (530)
+++...++++.|... .+.... ..+.|. .....+|+|+++++-.+ ..+|+++.+++.+-
T Consensus 366 -~~l~~~~~~l~~~~~--~~~~~~--------~~~~~~-------~~~~~~~~~~~~~~d~~----~~~e~~~~~~~~~~ 423 (433)
T 1d5t_A 366 -KEVEPALGLLEPIDQ--KFVAIS--------DLYEPI-------DDGSESQVFCSCSYDAT----THFETTCNDIKDIY 423 (433)
T ss_dssp -HHTHHHHTTTCSCSE--EEEEEE--------EEEEES-------CCSTTTCEEECCCCCSC----SBSHHHHHHHHHHH
T ss_pred -HHHHHHHHHhhhHHh--heeccc--------eeeeec-------CCCCCCCEEECCCCCcc----ccHHHHHHHHHHHH
Confidence 334444455544321 121111 112221 11223799999887643 35799999888888
Q ss_pred HHHH
Q 009646 481 NRVV 484 (530)
Q Consensus 481 ~~il 484 (530)
++|.
T Consensus 424 ~~~~ 427 (433)
T 1d5t_A 424 KRMA 427 (433)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8776
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.83 E-value=4.1e-21 Score=191.55 Aligned_cols=247 Identities=15% Similarity=0.063 Sum_probs=145.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCcc------ccccc----------ccccHHHHHHHhCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGNGFGSPDD------ISFWY----------PFRNIFSLVDELGIK 107 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~-G~~V~vlE~~~~~GG~~~------~g~~~----------~~~~~~~~~~~lg~~ 107 (530)
..++||+|||||++||+||+.|+++ |++|+|+|+++++||+.. .|+.. .++.+.++++++|+-
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~ 84 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDF 84 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCB
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhh
Confidence 3468999999999999999999999 999999999999999942 24321 245688889988873
Q ss_pred CCCCcccceeeccCCcccccccccCCCCCCCcccchhhhhccCCc-hhhhhccchhHHHhhhccCcchhhhcccCccHHH
Q 009646 108 PFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLP-LVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARE 186 (530)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 186 (530)
..+.....+..+|.... +|..... +..+.... ..+... ..+...... ....+..++++
T Consensus 85 --~~~~~~~~~~~~G~~~~---------~p~~~~~--~~~l~~~~~~~~~~~--~~l~~~~~~------~~~~~~~s~~e 143 (399)
T 1v0j_A 85 --TDYRHRVFAMHNGQAYQ---------FPMGLGL--VSQFFGKYFTPEQAR--QLIAEQAAE------IDTADAQNLEE 143 (399)
T ss_dssp --CCCCCCEEEEETTEEEE---------ESSSHHH--HHHHHTSCCCHHHHH--HHHHHHGGG------SCTTC----CC
T ss_pred --hccccceEEEECCEEEe---------CCCCHHH--HHHHhcccCCHHHHH--HHHHHHhhc------cCCCCcccHHH
Confidence 12222222222332111 1111100 01111100 001110 011111110 01124578899
Q ss_pred HHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhcCcc--ee-EeecCCCcchhHHHHHHHHHhcCC
Q 009646 187 LFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNF--DL-VWCRGTLREKIFEPWMDSMRTRGC 263 (530)
Q Consensus 187 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~--~~-~~~~gg~~~~l~~~l~~~l~~~G~ 263 (530)
|+.+ .+++.+.+.++.+++...++.+++++++..+......+ ....... .. .+++||+ +.++++|+ ++.|+
T Consensus 144 ~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~-~~~~~~~~~~~~~~p~gG~-~~l~~~l~---~~~g~ 217 (399)
T 1v0j_A 144 KAIS-LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRY-TFDNRYFSDTYEGLPTDGY-TAWLQNMA---ADHRI 217 (399)
T ss_dssp HHHH-HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCS-SSCCCSCCCSEEECBTTHH-HHHHHHHT---CSTTE
T ss_pred HHHH-HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEe-ccccchhhhhhcccccccH-HHHHHHHH---hcCCe
Confidence 9987 46788899999999999999999999986531000000 0000001 12 2566663 45666655 34689
Q ss_pred EEEcCceeeEEEecCCCCeEEEEEECCeeE-ecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEecc
Q 009646 264 EFLDGRRVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDK 342 (530)
Q Consensus 264 ~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~-~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~ 342 (530)
+|++|++|++|.. . | +++ .||.||+|+|+..+.++ .+..+.+.+...+.+.++.
T Consensus 218 ~I~l~~~V~~I~~----~----v----~~~~~aD~VI~t~p~~~l~~~-------------~l~~l~y~s~~~~~~~~~~ 272 (399)
T 1v0j_A 218 EVRLNTDWFDVRG----Q----L----RPGSPAAPVVYTGPLDRYFDY-------------AEGRLGWRTLDFEVEVLPI 272 (399)
T ss_dssp EEECSCCHHHHHH----H----H----TTTSTTCCEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESS
T ss_pred EEEECCchhhhhh----h----h----hhcccCCEEEECCcHHHHHhh-------------hhCCCCcceEEEEEEEEcc
Confidence 9999999999953 2 1 145 79999999999977654 1245677766667777776
Q ss_pred C
Q 009646 343 K 343 (530)
Q Consensus 343 ~ 343 (530)
+
T Consensus 273 ~ 273 (399)
T 1v0j_A 273 G 273 (399)
T ss_dssp S
T ss_pred c
Confidence 5
No 29
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.83 E-value=2.3e-19 Score=179.59 Aligned_cols=255 Identities=15% Similarity=0.190 Sum_probs=164.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc--------c----------------ccc--------c
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD--------I----------------SFW--------Y 92 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~--------~----------------g~~--------~ 92 (530)
+..+||+|||+|++|+++|+.|+++|++|+|+|+++++||+.. . +|. .
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~ 97 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFIL 97 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEee
Confidence 4568999999999999999999999999999999999999932 1 111 2
Q ss_pred ccccHHHHHHHhCCCCCCCcccce-eeccC--CcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhc
Q 009646 93 PFRNIFSLVDELGIKPFTGWMKSA-QYSEE--GLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDF 169 (530)
Q Consensus 93 ~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (530)
....+.+++.+.|+..+..|.... .+... ......+ ......+|......+ ....+++.++..+.+.+....++
T Consensus 98 ~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~-~g~~~~VPss~~e~~--~~~lLs~~eK~~l~kFL~~l~~~ 174 (475)
T 3p1w_A 98 VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTS-EKFIHKVPATDMEAL--VSPLLSLMEKNRCKNFYQYVSEW 174 (475)
T ss_dssp TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSC-CEEEEECCCSHHHHH--TCTTSCHHHHHHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccC-CCceEeCCCCHHHHh--hccCCCHHHHHHHHHHHHHHHhh
Confidence 345688899999998766665421 22110 0000000 001112333322221 33566777777766655555544
Q ss_pred cCcc-hhhhc--ccCccHHHHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHH--HhhcCcceeEeecC
Q 009646 170 DNTD-VAWRK--YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRG 244 (530)
Q Consensus 170 ~~~~-~~~~~--~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~--~~~~~~~~~~~~~g 244 (530)
.... ..|.. ++..++.+|++++++++.+.+.++.++... ...+..+.++...+..+..+. ...++.....+|+|
T Consensus 175 ~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~-~~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~g 253 (475)
T 3p1w_A 175 DANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALY-LNDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLY 253 (475)
T ss_dssp CTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCC-SSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETT
T ss_pred hhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhh-cCCCcccCCHHHHHHHHHHHHHHHhhcCCCceEEECC
Confidence 2221 12322 356899999999999988765443333211 122334455555554444332 22234567789999
Q ss_pred CCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC-eeEecCEEEEccChh
Q 009646 245 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGIS 305 (530)
Q Consensus 245 g~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~-~~~~ad~VV~a~~~~ 305 (530)
|+ ..|+++|.+.+++.|++|+++++|++|..++ +|++++|.+.+ +++.||.||++++..
T Consensus 254 G~-~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~-~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 254 GL-GGIPEGFSRMCAINGGTFMLNKNVVDFVFDD-DNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp CT-THHHHHHHHHHHHC--CEESSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred CH-HHHHHHHHHHHHHcCCEEEeCCeEEEEEEec-CCeEEEEEECCCcEEECCEEEECCCcc
Confidence 86 5799999999999999999999999999833 37888898875 579999999999865
No 30
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.80 E-value=2.1e-19 Score=176.89 Aligned_cols=242 Identities=15% Similarity=0.092 Sum_probs=145.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc----cccc----------cccccHHHHHHHhCCCCCCCcc
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD----ISFW----------YPFRNIFSLVDELGIKPFTGWM 113 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~----~g~~----------~~~~~~~~~~~~lg~~~~~~~~ 113 (530)
+||+|||||++||++|++|+++|++|+|+|+++++||+.. .|+. ..++.+.+++++++... .+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~--~~~ 79 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFN--RFT 79 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEESCHHHHHHHHTTSCBC--CCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCCCHHHHHHHHHhhhhh--hcc
Confidence 6999999999999999999999999999999999999932 2322 12456778888877531 111
Q ss_pred cceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHHHhCC
Q 009646 114 KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGC 193 (530)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~g~ 193 (530)
.......++... .+|..... +..+......... ...+..... .+...+..++++|+.+. +
T Consensus 80 ~~~~~~~~g~~~---------~~p~~~~~--~~~l~~~~~~~~~--~~~l~~~~~------~~~~~~~~s~~~~~~~~-~ 139 (367)
T 1i8t_A 80 NSPLAIYKDKLF---------NLPFNMNT--FHQMWGVKDPQEA--QNIINAQKK------KYGDKVPENLEEQAISL-V 139 (367)
T ss_dssp CCCEEEETTEEE---------ESSBSHHH--HHHHHCCCCHHHH--HHHHHHHTT------TTCCCCCCSHHHHHHHH-H
T ss_pred ccceEEECCeEE---------EcCCCHHH--HHHHhccCCHHHH--HHHHHHHhh------ccCCCCCccHHHHHHHH-H
Confidence 111222222111 11111110 0111000000000 111111111 11123567999999886 7
Q ss_pred CHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhhcCc-ce-e-EeecCCCcchhHHHHHHHHHhcCCEEEcCce
Q 009646 194 SERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKN-FD-L-VWCRGTLREKIFEPWMDSMRTRGCEFLDGRR 270 (530)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~-~~-~-~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~ 270 (530)
++++.+.++.+++...++.+++++++..... +.......... .+ . .+++||. ..++++|+ + |++|++|++
T Consensus 140 g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~-l~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~----~-g~~i~l~~~ 212 (367)
T 1i8t_A 140 GEDLYQALIKGYTEKQWGRSAKELPAFIIKR-IPVRFTFDNNYFSDRYQGIPVGGY-TKLIEKML----E-GVDVKLGID 212 (367)
T ss_dssp HHHHHHHHTHHHHHHHHSSCGGGSCTTSSCC-CCBCSSSCCCSCCCSEEECBTTCH-HHHHHHHH----T-TSEEECSCC
T ss_pred hHHHHHHHHHHHHhhhhCCChHHcCHHHHhh-ceeeeccccccccchhhcccCCCH-HHHHHHHh----c-CCEEEeCCc
Confidence 7889999999999999999999999864310 00000000000 11 1 2667764 45665555 3 699999999
Q ss_pred eeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEeccCC
Q 009646 271 VTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKV 344 (530)
Q Consensus 271 V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~ 344 (530)
|++|. . . + .+.+|+||+|+|+..+.++ ....+.+.+...+.+.++.+.
T Consensus 213 V~~i~--~--~----v-----~~~~D~VV~a~p~~~~~~~-------------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 213 FLKDK--D--S----L-----ASKAHRIIYTGPIDQYFDY-------------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp GGGSH--H--H----H-----HTTEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSSC
T ss_pred eeeec--h--h----h-----hccCCEEEEeccHHHHHHH-------------hhCCCCCceEEEEEEEecccc
Confidence 99885 2 2 1 2568999999999875532 234577777777778887764
No 31
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.79 E-value=2.8e-18 Score=169.89 Aligned_cols=237 Identities=15% Similarity=0.137 Sum_probs=143.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc------cccc----------cccccHHHHHHHhCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD------ISFW----------YPFRNIFSLVDELGIKPFT 110 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~------~g~~----------~~~~~~~~~~~~lg~~~~~ 110 (530)
++||+|||||++||++|+.|+++|++|+|+|+++++||+.. .|+. ..++++.+++++++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~-- 80 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMM-- 80 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEE--
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhc--
Confidence 37999999999999999999999999999999999999832 2332 13466888889887521
Q ss_pred CcccceeeccCCcccccccccCCCCCCCcccchhhhhccCC--chhhhhccchhHHHhhhccCcchhhhcccCccHHHHH
Q 009646 111 GWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRL--PLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELF 188 (530)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 188 (530)
.+........++.... +|..... +...... ...+. ...+..... . ...+..++++|+
T Consensus 81 ~~~~~~~~~~~g~~~~---------~P~~~~~--~~~l~~~~~~~~~~---~~~l~~~~~---~----~~~~~~sl~e~~ 139 (384)
T 2bi7_A 81 PYVNRVKATVNGQVFS---------LPINLHT--INQFFSKTCSPDEA---RALIAEKGD---S----TIADPQTFEEEA 139 (384)
T ss_dssp ECCCCEEEEETTEEEE---------ESCCHHH--HHHHTTCCCCHHHH---HHHHHHHSC---C----SCSSCCBHHHHH
T ss_pred ccccceEEEECCEEEE---------CCCChhH--HHHHhcccCCHHHH---HHHHHHhhh---c----cCCCCcCHHHHH
Confidence 1111112222221111 1111110 0111100 11001 111111111 0 023567999999
Q ss_pred HHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhh-cCccee-EeecCCCcchhHHHHHHHHHhcCCEEE
Q 009646 189 KQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH-QKNFDL-VWCRGTLREKIFEPWMDSMRTRGCEFL 266 (530)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~-~~~~~~-~~~~gg~~~~l~~~l~~~l~~~G~~i~ 266 (530)
.+. +++.+.+.++.++....++.+++++++.............. .-.... .+++||. ..++++|++ +.|++|+
T Consensus 140 ~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~---~~g~~I~ 214 (384)
T 2bi7_A 140 LRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY-TQMIKSILN---HENIKVD 214 (384)
T ss_dssp HHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH-HHHHHHHHC---STTEEEE
T ss_pred HHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH-HHHHHHHHh---cCCCEEE
Confidence 875 67999999999999999999999999864310000000000 000111 2667764 456666653 4689999
Q ss_pred cCceee-EEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEec
Q 009646 267 DGRRVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFD 341 (530)
Q Consensus 267 ~~~~V~-~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~ 341 (530)
+|++|+ +|.. .+|+||+|+|+..+.+++ +..+.+.+...+.+.++
T Consensus 215 l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~-------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 215 LQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ-------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT-------------TCCCCEEEEEEEEEEEE
T ss_pred ECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh-------------cCCCCcceEEEEEEEeC
Confidence 999998 7742 289999999999877542 23466666666667776
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.77 E-value=3.1e-18 Score=168.34 Aligned_cols=344 Identities=12% Similarity=0.108 Sum_probs=196.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc-----cccc----------cccccHHHHHHHhCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD-----ISFW----------YPFRNIFSLVDELGIKPF 109 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~-----~g~~----------~~~~~~~~~~~~lg~~~~ 109 (530)
...+||+|||||++||++|+.|+++|++|+|+|+++++||+.. .|+. ...+.+.+++++++...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~- 105 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR- 105 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE-
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc-
Confidence 4568999999999999999999999999999999999999943 3332 13456788888888431
Q ss_pred CCcccceeeccCCcccccccccCCCCCCCcccchhhhhccCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHH
Q 009646 110 TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 189 (530)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 189 (530)
..........+|... .+|..... +..+..+.... ......+. ...+...+..++++|+.
T Consensus 106 -~~~~~~~~~~~g~l~---------~lP~~~~~--~~~l~~~~~~~-----~~~~~~l~----~~~~~~~~~~s~~e~~~ 164 (397)
T 3hdq_A 106 -PYQHRVLASVDGQLL---------PIPINLDT--VNRLYGLNLTS-----FQVEEFFA----SVAEKVEQVRTSEDVVV 164 (397)
T ss_dssp -ECCCBEEEEETTEEE---------EESCCHHH--HHHHHTCCCCH-----HHHHHHHH----HHCCCCSSCCBHHHHHH
T ss_pred -cccccceEEECCEEE---------EcCCChHH--HHHhhccCCCH-----HHHHHHHh----hcccCCCCCcCHHHHHH
Confidence 111111222222211 11111110 11111111000 00111111 01223346789999988
Q ss_pred HhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHHHHHhh-cCccee-EeecCCCcchhHHHHHHHHHhcCCEEEc
Q 009646 190 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH-QKNFDL-VWCRGTLREKIFEPWMDSMRTRGCEFLD 267 (530)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~-~~~~~~-~~~~gg~~~~l~~~l~~~l~~~G~~i~~ 267 (530)
+. +++++.+.++.+++.+.|+.+++++++.+............ .-.... .+|.||. ..+++.++ ++.|++|++
T Consensus 165 ~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy-~~l~e~l~---~~~g~~V~l 239 (397)
T 3hdq_A 165 SK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGY-TRMFQNML---SSPNIKVML 239 (397)
T ss_dssp HH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCH-HHHHHHHT---CSTTEEEEE
T ss_pred Hh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCH-HHHHHHHH---hccCCEEEE
Confidence 63 66889999999999999999999999864321100000000 000112 2577774 45655554 456999999
Q ss_pred CceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEeccCCCCC
Q 009646 268 GRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP 347 (530)
Q Consensus 268 ~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 347 (530)
|++|+++ +.++.+|.||+|+|...+... ....|.+.+...+.+.++.+...+
T Consensus 240 ~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~-------------~~g~L~yrsl~~~~~~~~~~~~~~ 291 (397)
T 3hdq_A 240 NTDYREI---------------ADFIPFQHMIYTGPVDAFFDF-------------CYGKLPYRSLEFRHETHDTEQLLP 291 (397)
T ss_dssp SCCGGGT---------------TTTSCEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSSCSCS
T ss_pred CCeEEec---------------cccccCCEEEEcCCHHHHHHH-------------hcCCCCCceEEEEEEEeccccCCC
Confidence 9999833 224568999999997665311 234677777777778887654322
Q ss_pred CCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhHhhcCCCCCccccceE
Q 009646 348 NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKI 425 (530)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~ 425 (530)
..+ ++-.+...-..+....... ..+.+++++...|.. .+++.+..+++-.+.+.+.++..
T Consensus 292 ~~~--vn~~d~~p~tRi~e~k~~~--~~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~a-------------- 353 (397)
T 3hdq_A 292 TGT--VNYPNDYAYTRVSEFKHIT--GQRHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEALA-------------- 353 (397)
T ss_dssp SSE--EECSSSSSCSEEEEHHHHH--CCCCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHHH--------------
T ss_pred CeE--EEeCCCCcceEEEeecccC--CCCCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHHH--------------
Confidence 221 2211111000111111111 112356666555432 23444444443333333322221
Q ss_pred EeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHH
Q 009646 426 RRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 485 (530)
Q Consensus 426 ~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~ 485 (530)
...+||+|+|.....-| ..|+.++.+|+.+++.++.
T Consensus 354 ----------------------~~~~~v~~~GRlg~y~Y--~~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 354 ----------------------DAAQDVTFVGRLATYRY--YNMDQVVAQALATFRRLQG 389 (397)
T ss_dssp ----------------------HHCTTEEECSTTTTTCC--CCHHHHHHHHHHHHHHHHC
T ss_pred ----------------------hcCCCEEEcccceEEEe--ccHHHHHHHHHHHHHHHhc
Confidence 01268999998886545 4899999999999999875
No 33
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.68 E-value=2.4e-15 Score=148.64 Aligned_cols=207 Identities=8% Similarity=-0.039 Sum_probs=106.8
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC---eeEecCEEEEccChhhHHHhhhhc-cccChHHHH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK---ETYSAGAVVLAVGISTLQELIKNS-ILCNREEFL 323 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~---~~~~ad~VV~a~~~~~~~~ll~~~-~~~~~~~~~ 323 (530)
..+...|.+.+++.|++|+++++|++|..++ ++.+ .|.+++ .++.||.||+|+|.+.. .++... ..+. +
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~~~-~--- 222 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGF-ELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGIPR-D--- 222 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSE-EEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETSCG-G---
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceE-EEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCCCc-c---
Confidence 3577788888899999999999999999876 3433 455553 38999999999999843 344332 1110 0
Q ss_pred hhccccceeEEEEEEEeccCCCCCCCCceeeccCCCccc-eeeeccccccccCCCCCeEEEE-EecCCCCCCCCCHHHHH
Q 009646 324 KVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAW-TFFDLNKIYDEHKDDSATVIQA-DFYHANELMPLKDDQVV 401 (530)
Q Consensus 324 ~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~eei~ 401 (530)
......+....++.++.+. +... .++......+. ..+.. +.++.++.. +....+.+....+++..
T Consensus 223 --~~~~i~p~rG~~~~~~~~~--~~~~-~~~~~p~~~~~~~~~~~--------~~~g~~~iG~t~e~~~~~~~~~~~~~~ 289 (369)
T 3dme_A 223 --SIPPEYLCKGSYFTLAGRA--PFSR-LIYPVPQHAGLGVHLTL--------DLGGQAKFGPDTEWIATEDYTLDPRRA 289 (369)
T ss_dssp --GSCCCEEEEEEEEECSSSC--SCSS-EEEECTTCSSCCCCEEE--------CTTSCEEECCCCEEESSCCCCCCGGGG
T ss_pred --ccceeeecceEEEEECCCC--ccCc-eeecCCCCCCceEEEeC--------ccCCcEEECCCcccccccccccCHHHH
Confidence 0111222222344454431 1111 11111100000 01100 112222211 11000112223345567
Q ss_pred HHHHHHHhHhhcCCCCCccccceEEeCCCCceecC-CCCcccCCCC----CCCCCceEEeeccccCCCCCCcchHHHHHH
Q 009646 402 AKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFF-PGSYKYMMRG----FTSFPNLFMAGDWITTRHGSWSQERSYVTG 476 (530)
Q Consensus 402 ~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~-~g~~~~~~~~----~~~~~~l~~aG~~~~~g~~~~~iega~~sG 476 (530)
+.+++.+.++||.+....+...|.... +... ++.....|.+ ....+|+|++..+.+. ++-.+...|
T Consensus 290 ~~l~~~~~~~~P~l~~~~v~~~w~G~R----p~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~-----G~t~ap~~a 360 (369)
T 3dme_A 290 DVFYAAVRSYWPALPDGALAPGYTGIR----PKISGPHEPAADFAIAGPASHGVAGLVNLYGIESP-----GLTASLAIA 360 (369)
T ss_dssp GGHHHHHHTTCTTCCTTCCEEEEEEEE----EESSCTTSCCCCCEEECHHHHCCTTEEEEECCCTT-----HHHHHHHHH
T ss_pred HHHHHHHHHHCCCCChhhceecceecc----ccccCCCCCcCCeEEecccccCCCCEEEEeCCCCc-----hHhccHHHH
Confidence 788899999999887655554433211 1111 1111112222 1245899988877743 345567777
Q ss_pred HHHHHHH
Q 009646 477 LEAANRV 483 (530)
Q Consensus 477 ~~aA~~i 483 (530)
+.+|+.|
T Consensus 361 ~~~a~~i 367 (369)
T 3dme_A 361 EETLARL 367 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777765
No 34
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.66 E-value=3.7e-14 Score=140.91 Aligned_cols=197 Identities=12% Similarity=0.040 Sum_probs=110.3
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhcc
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 327 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 327 (530)
..+...|.+.+++.|++|+++++|++|..++ +.+ .|.++++++.||.||+|+|.+.. .++..... .
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~s~-~l~~~~~~----------~ 229 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKTPSGDVWANHVVVASGVWSG-MFFKQLGL----------N 229 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEETTEEEEEEEEEECCGGGTH-HHHHHTTC----------C
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEcCCceEEcCEEEECCChhHH-HHHHhcCC----------C
Confidence 3577778888888999999999999999876 555 67777779999999999999753 24332110 1
Q ss_pred ccceeEEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009646 328 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSY 407 (530)
Q Consensus 328 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei~~~~l~~ 407 (530)
+...+.....+.++.+... ... .++. ...+ ++. ..++.++.........+....+++..+.+++.
T Consensus 230 ~~~~~~~g~~~~~~~~~~~-~~~-~~~~---~~~~-~~p---------~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~ 294 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDDIP-LTK-TLYH---DHCY-IVP---------RKSGRLVVGATMKPGDWSETPDLGGLESVMKK 294 (382)
T ss_dssp CCCEEEEEEEEEEECCSSC-CCS-EEEE---TTEE-EEE---------CTTSEEEEECCCEETCCCCSCCHHHHHHHHHH
T ss_pred CceeccceEEEEECCCCCC-ccc-eEEc---CCEE-EEE---------cCCCeEEEeecccccCCCCCCCHHHHHHHHHH
Confidence 1222222223344332111 111 1111 1111 111 11233322211111223334456778899999
Q ss_pred HhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHH
Q 009646 408 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 484 (530)
Q Consensus 408 L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il 484 (530)
+.++||.+....+...+. +...++++..... ......+|+|+++.+.+.| +..|..+|+.+|+.|+
T Consensus 295 ~~~~~p~l~~~~~~~~w~-----g~~~~t~d~~p~i-g~~~~~~~l~~~~G~~g~G-----~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 295 AKTMLPAIQNMKVDRFWA-----GLRPGTKDGKPYI-GRHPEDSRILFAAGHFRNG-----ILLAPATGALISDLIM 360 (382)
T ss_dssp HHHHCGGGGGSEEEEEEE-----EEEEECSSSCCEE-EEETTEEEEEEEECCSSCT-----TTTHHHHHHHHHHHHT
T ss_pred HHHhCCCcCCCceeeEEE-----EecccCCCCCcEe-ccCCCcCCEEEEEcCCcch-----HHHhHHHHHHHHHHHh
Confidence 999999875433333222 2223344432110 1112357899998877443 4458889999999886
No 35
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.64 E-value=1.9e-12 Score=133.35 Aligned_cols=177 Identities=11% Similarity=0.100 Sum_probs=106.9
Q ss_pred cCCchhhhhccchhHHHhhhccCcchhhhcccCccHHHHHHHhCCCHHHHHHhhhhhhhhhcCCCchhchHHHHHHHHHH
Q 009646 149 SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYF 228 (530)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 228 (530)
..+++.++..+.+.+.....+......+..++..++.+|++++++++.+...+...+ .... ....++...+..+..
T Consensus 282 ~~Lsl~EKr~L~kFl~~~~~~~~~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~--~~~~pa~~~l~~i~~ 357 (650)
T 1vg0_A 282 KQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AMTS--ETTSCTVDGLKATKK 357 (650)
T ss_dssp SSSCHHHHHHHHHHHHHHHTGGGCHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC----CCSCBHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHhccChHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH--hccC--CCCCchhHHHHHHHH
Confidence 445555555555544444433322334556788999999999988887544443222 1111 111233333222233
Q ss_pred HHH--hhcCcceeEeecCCCcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChh
Q 009646 229 IIL--AHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 305 (530)
Q Consensus 229 ~~~--~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~ 305 (530)
+.. ...+.....++.||+ ..|.++|.+.++..|++|+++++|++|..+++.|++++|... |+++.||.||++..
T Consensus 358 ~l~sl~~yg~sg~~yp~GG~-g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~-- 434 (650)
T 1vg0_A 358 FLQCLGRYGNTPFLFPLYGQ-GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS-- 434 (650)
T ss_dssp HHHHTTSSSSSSEEEETTCT-THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG--
T ss_pred HHHHHHhhccCceEEeCCch-hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh--
Confidence 322 223334567888885 579999999999999999999999999987512678788754 77999999998332
Q ss_pred hHHHhhhhccccChHHHHhhccccceeEEEEEEEeccCCC
Q 009646 306 TLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT 345 (530)
Q Consensus 306 ~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~ 345 (530)
. ++.. . ...+....+.++.+.++++..
T Consensus 435 ~----lp~~------~---~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 435 Y----LSEN------T---CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp G----BCTT------T---TTTCCCEEEEEEEEEESSCSS
T ss_pred h----cCHh------H---hccccccceEEEEEEecCCCC
Confidence 1 2211 0 011223456666777888764
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.63 E-value=3.3e-14 Score=151.59 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=47.2
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 306 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~ 306 (530)
..+...|.+.+++.|++|+++++|++|..++ +.+ .|.+. ++++.||.||+|+|.+.
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeE-EEEECCCCEEECCEEEECCCcch
Confidence 3577788888888999999999999999887 554 56664 56899999999999884
No 37
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.63 E-value=2.8e-13 Score=135.60 Aligned_cols=201 Identities=14% Similarity=0.091 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccc
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 328 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l 328 (530)
.+...|.+.+++.|++|+++++|++|..++ ++++.|.++++++.||.||+|+|.+... +...... .+
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s~~-l~~~~g~----------~~ 241 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHSSV-LAEMAGF----------EL 241 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGHHH-HHHHHTC----------CC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhHHH-HHHHcCC----------CC
Confidence 577778888888999999999999999876 6666777776689999999999987532 2221100 11
Q ss_pred cceeEEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecC-CCCCCCCCHHHHHHHHHHH
Q 009646 329 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH-ANELMPLKDDQVVAKAVSY 407 (530)
Q Consensus 329 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~eei~~~~l~~ 407 (530)
...+.....+.++ +...... ..+... . ...++-. ..++.++...... ........+++..+.+++.
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~--~-~~~y~~p--------~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~ 308 (405)
T 2gag_B 242 PIQSHPLQALVSE-LFEPVHP-TVVMSN--H-IHVYVSQ--------AHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAA 308 (405)
T ss_dssp CEEEEEEEEEEEE-EBCSCCC-SEEEET--T-TTEEEEE--------CTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHH
T ss_pred CccccceeEEEec-CCccccC-ceEEeC--C-CcEEEEE--------cCCCcEEEEeccCCCCccccCCCHHHHHHHHHH
Confidence 1112211122222 2211011 111110 1 1111110 0233333222221 1112223345677888999
Q ss_pred HhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHHHh
Q 009646 408 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 487 (530)
Q Consensus 408 L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~~~ 487 (530)
+.++||.+....+...+.. ....+++..... . ..+.+|+|++..+.+.|+ -.|...|+.+|+.|....
T Consensus 309 ~~~~~p~l~~~~~~~~w~g-----~~~~t~d~~p~i-g-~~~~~~l~~~~G~~g~G~-----~~a~~~g~~la~~i~g~~ 376 (405)
T 2gag_B 309 AVELFPIFARAHVLRTWGG-----IVDTTMDASPII-S-KTPIQNLYVNCGWGTGGF-----KGTPGAGFTLAHTIANDE 376 (405)
T ss_dssp HHHHCGGGGGCEECEEEEE-----EEEEETTSCCEE-E-ECSSBTEEEEECCGGGCS-----TTHHHHHHHHHHHHHHTS
T ss_pred HHHhCCccccCCcceEEee-----ccccCCCCCCEe-c-ccCCCCEEEEecCCCchh-----hHHHHHHHHHHHHHhCCC
Confidence 9999998754444433222 223344432111 0 112579998887774444 458889999999998543
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.62 E-value=2e-13 Score=135.45 Aligned_cols=200 Identities=10% Similarity=0.060 Sum_probs=106.5
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhcc
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 327 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 327 (530)
..+...|.+.++++|++|+++++|++|..++ +. +.|.++++++.||.||+|+|.+... ++.... +..
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t~~g~i~a~~VV~A~G~~s~~-l~~~~g---------~~~ 220 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GA-WEVRCDAGSYRAAVLVNAAGAWCDA-IAGLAG---------VRP 220 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TE-EEEECSSEEEEESEEEECCGGGHHH-HHHHHT---------CCC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--Ce-EEEEeCCCEEEcCEEEECCChhHHH-HHHHhC---------CCC
Confidence 3577788888889999999999999999876 55 5677877799999999999998643 332211 111
Q ss_pred ccceeEEEEEEEeccCCCCC-CCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHH
Q 009646 328 LASIDVVSVKLWFDKKVTVP-NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKA 404 (530)
Q Consensus 328 l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~eei~~~~ 404 (530)
+...+.....+.++.+.... .....+... .... ++- +..+.++...... ........+++..+.+
T Consensus 221 ~~~~p~rg~~~~~~~~~~~~~~~~p~~~~~--~~~~-y~~---------p~~g~~~ig~~~~~~~~~~~~~~~~~~~~~~ 288 (381)
T 3nyc_A 221 LGLQPKRRSAFIFAPPPGIDCHDWPMLVSL--DESF-YLK---------PDAGMLLGSPANADPVEAHDVQPEQLDIATG 288 (381)
T ss_dssp CCCEEEEEEEEEECCCTTCCCTTCCEEEET--TSSC-EEE---------EETTEEEEECCCCEECCSSCCCCCHHHHHHH
T ss_pred CceeeeEEEEEEECCCcCCCcCccceEEeC--CCCE-EEE---------eCCCcEEEeCCcCCCCCcccCCCChHHHHHH
Confidence 12223222234444332111 111111111 1111 111 0113333221111 1112222233445566
Q ss_pred HHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHH
Q 009646 405 VSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 484 (530)
Q Consensus 405 l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il 484 (530)
++.+.+ +|.+....+...|.. ....+++..... +.....+|+|++..+.+.|+. -+...|+.+|+.|+
T Consensus 289 ~~~~~~-~~~l~~~~~~~~w~G-----~r~~t~D~~p~i-g~~~~~~~l~~a~G~~g~G~~-----~ap~~g~~la~~i~ 356 (381)
T 3nyc_A 289 MYLIEE-ATTLTIRRPEHTWAG-----LRSFVADGDLVA-GYAANAEGFFWVAAQGGYGIQ-----TSAAMGEASAALIR 356 (381)
T ss_dssp HHHHHH-HBSCCCCCCSEEEEE-----EEEECTTSCCEE-EECTTSTTEEEEECCTTCTTT-----THHHHHHHHHHHHT
T ss_pred HHHHHh-cCCCcccceeeeeEE-----ccccCCCCCcee-cCCCCCCCeEEEEcCCChhHh-----hCHHHHHHHHHHHh
Confidence 666665 566544344433322 233445432111 112345899999888754443 47788999998886
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.62 E-value=7.6e-14 Score=138.63 Aligned_cols=205 Identities=10% Similarity=0.068 Sum_probs=112.6
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhc-
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVL- 326 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~- 326 (530)
..+...|.+.+++.|++|+++++|++|+.++ +++.+|.++++++.||.||+|+|.+... +..... +.
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s~~-l~~~~g---------~~~ 216 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWANL-INAMAG---------IKT 216 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGHHH-HHHHHT---------CCS
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhHHH-HHHHcC---------CCc
Confidence 3567778888888999999999999999876 6666677877799999999999998533 322110 00
Q ss_pred cccceeEEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEE-ecCCCCCCCCCHHHHHHHHH
Q 009646 327 NLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD-FYHANELMPLKDDQVVAKAV 405 (530)
Q Consensus 327 ~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~eei~~~~l 405 (530)
.+...+.....+.++..... .....+... .....++-+ ..++.++... ......+....+++..+.++
T Consensus 217 ~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~--~~~~~y~~p--------~~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~ 285 (382)
T 1y56_B 217 KIPIEPYKHQAVITQPIKRG-TINPMVISF--KYGHAYLTQ--------TFHGGIIGGIGYEIGPTYDLTPTYEFLREVS 285 (382)
T ss_dssp CCCCEEEEEEEEEECCCSTT-SSCSEEEES--TTTTEEEEC--------CSSSCCEEECSCCBSSCCCCCCCHHHHHHHH
T ss_pred CcCCCeeEeEEEEEccCCcc-cCCCeEEec--CCCeEEEEE--------eCCeEEEecCCCCCCCCCCCCCCHHHHHHHH
Confidence 02222222222333321110 110111111 101111110 0123222211 11111222334567788899
Q ss_pred HHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHHHH
Q 009646 406 SYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 485 (530)
Q Consensus 406 ~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~ 485 (530)
+.+.++||.+....+...+. +....+++..... ......+|+|++..+.+. ++--|...|+.+|+.|+.
T Consensus 286 ~~~~~~~p~l~~~~~~~~~~-----g~r~~t~d~~p~i-g~~~~~~~~~~~~G~~g~-----G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 286 YYFTKIIPALKNLLILRTWA-----GYYAKTPDSNPAI-GRIEELNDYYIAAGFSGH-----GFMMAPAVGEMVAELITK 354 (382)
T ss_dssp HHHHHHCGGGGGSEEEEEEE-----EEEEECTTSCCEE-EEESSSBTEEEEECCTTC-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcCCCCceEEEE-----eccccCCCCCcEe-ccCCCCCCEEEEEecCcc-----hHhhhHHHHHHHHHHHhC
Confidence 99999999875444433222 2233344432111 112235799988776632 466788899999999985
Q ss_pred H
Q 009646 486 Y 486 (530)
Q Consensus 486 ~ 486 (530)
.
T Consensus 355 ~ 355 (382)
T 1y56_B 355 G 355 (382)
T ss_dssp S
T ss_pred C
Confidence 4
No 40
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.61 E-value=8.7e-14 Score=140.86 Aligned_cols=202 Identities=10% Similarity=0.095 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHhcCCEEEcCc---eeeEEEecCCCCeEEEEEECCe-eEecCEEEEccChhhHHHhhhhccccChHHHHh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVCGKE-TYSAGAVVLAVGISTLQELIKNSILCNREEFLK 324 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~---~V~~I~~~~~~g~v~~v~~~~~-~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~ 324 (530)
.+...|.+.+++.|++|++++ +|++|..++ +++.+|.+.++ ++.||.||+|+|.+... +++ ..
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~-l~~-l~--------- 228 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASAGQ-FLD-FK--------- 228 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGGGG-TSC-CT---------
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCChhh-hcC-cc---------
Confidence 577788888889999999999 999999876 77777888755 89999999999998543 443 10
Q ss_pred hccccceeEEEEEEEeccCCCCC-CCCceeeccCCCccceeeeccccccccCCCCCeEEEEE----ecCC----------
Q 009646 325 VLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD----FYHA---------- 389 (530)
Q Consensus 325 ~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------- 389 (530)
..+........++.+....... ....++... .. .+|- .. .+.++.+.... +...
T Consensus 229 -~~~~p~~~~~~~~~l~~~~~~~~~~~p~~~~~--~~--~~~~-~p-----~~~~~~l~i~~~~~g~~~~~~~~~~~~~~ 297 (438)
T 3dje_A 229 -NQLRPTAWTLVHIALKPEERALYKNIPVIFNI--ER--GFFF-EP-----DEERGEIKICDEHPGYTNMVQSADGTMMS 297 (438)
T ss_dssp -TCCEEEEEEEEEEECCGGGHHHHTTCCEEEET--TT--EEEC-SC-----CTTTCEEEEEECCSCEECEEECTTCCEEE
T ss_pred -cceeeEEEEEEEEEcChHHhhhhcCCCEEEEC--CC--ceec-CC-----CCCCCeEEEEeCCCCccCCccCCCccccc
Confidence 0111111112223232211000 000011100 00 0110 00 00122222211 0000
Q ss_pred CCC-CCCCHHHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCc
Q 009646 390 NEL-MPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWS 468 (530)
Q Consensus 390 ~~~-~~~~~eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~ 468 (530)
.+. ....+++..+.+.+.+.++||.+....+...+.. +...+|+.... .......+|||+|..+.+.|
T Consensus 298 ~p~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~~~g-----~~~~t~D~~pi-ig~~p~~~~l~~a~G~~g~G----- 366 (438)
T 3dje_A 298 IPFEKTQIPKEAETRVRALLKETMPQLADRPFSFARIC-----WCADTANREFL-IDRHPQYHSLVLGCGASGRG----- 366 (438)
T ss_dssp CCCCCSSCBHHHHHHHHHHHHHHCGGGTTCCCSEEEEE-----EEEECTTSCCE-EEECSSCTTEEEEECCTTCC-----
T ss_pred CCcccccCCHHHHHHHHHHHHHhCcccccCCcceeeEE-----EeCcCCCCCeE-EeecCCCCCEEEEECCCCcc-----
Confidence 000 1223466778899999999999865444443332 23345554221 11122358999998887443
Q ss_pred chHHHHHHHHHHHHHHH
Q 009646 469 QERSYVTGLEAANRVVD 485 (530)
Q Consensus 469 iega~~sG~~aA~~il~ 485 (530)
+-.+...|+.+|+.|+.
T Consensus 367 ~~~ap~~g~~la~~i~g 383 (438)
T 3dje_A 367 FKYLPSIGNLIVDAMEG 383 (438)
T ss_dssp GGGTTTHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHhC
Confidence 34467789999998863
No 41
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.59 E-value=1.2e-12 Score=130.72 Aligned_cols=56 Identities=29% Similarity=0.392 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhH
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 307 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~ 307 (530)
.+...|.+.+++.|++|+++++|++|+.++ +.+ .|.++++++.||.||+|+|.+..
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v-~v~t~~g~i~a~~VV~A~G~~s~ 209 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA--DGV-SVTTDRGTYRAGKVVLACGPYTN 209 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEESSCEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeE-EEEECCCEEEcCEEEEcCCcChH
Confidence 466778888888999999999999999876 544 46677778999999999998854
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.59 E-value=1.2e-13 Score=147.24 Aligned_cols=56 Identities=13% Similarity=0.126 Sum_probs=46.6
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-Ce-eEecCEEEEccChhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE-TYSAGAVVLAVGIST 306 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~-~~~ad~VV~a~~~~~ 306 (530)
..+...|.+.+++.|++|+++++|++|..++ +.+ .|.++ ++ ++.||.||+|+|.+.
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 3577888888889999999999999999886 444 56665 44 899999999999984
No 43
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.58 E-value=3.8e-13 Score=134.14 Aligned_cols=58 Identities=26% Similarity=0.319 Sum_probs=45.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc-cccccccccHHHHHHHhCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD-ISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~-~g~~~~~~~~~~~~~~lg~~ 107 (530)
+.+|||+|||||++||++|+.|+++|++|+|+||++.+|.... ++.+. ...++++++.
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~-----~~~l~~l~~~ 60 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS-----KGILNEADIK 60 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE-----THHHHHTTCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccC-----HHHHHHcCCC
Confidence 3469999999999999999999999999999999988876533 22221 1456677765
No 44
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.57 E-value=2.3e-13 Score=129.34 Aligned_cols=40 Identities=35% Similarity=0.597 Sum_probs=38.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCc
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD 86 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~ 86 (530)
++||+|||||++||+||+.|+++|++|+||||++.+||++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 4899999999999999999999999999999999999974
No 45
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.55 E-value=4.3e-12 Score=126.26 Aligned_cols=203 Identities=9% Similarity=0.029 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccc
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 328 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l 328 (530)
.+...|.+.+++.|++|+++++|++|+.++ +.+ .|.++++++.||.||+|+|.+.. .+++.... .+
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~~~-~l~~~~g~----------~~ 216 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISP--DSV-KIETANGSYTADKLIVSMGAWNS-KLLSKLNL----------DI 216 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SCE-EEEETTEEEEEEEEEECCGGGHH-HHGGGGTE----------EC
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeE-EEEeCCCEEEeCEEEEecCccHH-HHhhhhcc----------CC
Confidence 577778888888999999999999999876 433 46677778999999999999854 34433210 11
Q ss_pred cceeEEEEEEEeccCC--CCC-CCCceeeccCCCccceeeeccccccccCCCCC-eEEEEEec-----CCCCCCCCC--H
Q 009646 329 ASIDVVSVKLWFDKKV--TVP-NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSA-TVIQADFY-----HANELMPLK--D 397 (530)
Q Consensus 329 ~~~~~~~v~l~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~--~ 397 (530)
...+.....+.++.+. ... .....+.... .....+. .. ..++ .++..... .++...... .
T Consensus 217 pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~y~-~p-------~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~ 287 (389)
T 2gf3_A 217 PLQPYRQVVGFFESDESKYSNDIDFPGFMVEV-PNGIYYG-FP-------SFGGCGLKLGYHTFGQKIDPDTINREFGVY 287 (389)
T ss_dssp CCEEEEEEEEEECCCHHHHBGGGTCCEEEEEE-TTEEEEE-EC-------BSTTCCEEEEESSCCEECCTTTCCCCTTSS
T ss_pred ceEEEEEEEEEEecCcccccccccCCEEEEeC-CCCcEEE-cC-------CCCCCcEEEEEcCCCCccCcccccCccCCC
Confidence 2222222233443221 000 0000110000 0001111 00 0122 33222111 111111222 3
Q ss_pred HHHHHHHHHHHhHhhcCCCCCccccceEEeCCCCceecCCCCcccCCCCCCCCCceEEeeccccCCCCCCcchHHHHHHH
Q 009646 398 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGL 477 (530)
Q Consensus 398 eei~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~ 477 (530)
++..+.+++.+.++||.+.. .+... | .+....+|+..... ......+|+|++..+.+. ++..|...|+
T Consensus 288 ~~~~~~l~~~~~~~~P~l~~-~~~~~----w-~g~r~~t~D~~p~i-g~~~~~~~l~~a~G~~g~-----G~~~ap~~g~ 355 (389)
T 2gf3_A 288 PEDESNLRAFLEEYMPGANG-ELKRG----A-VCMYTKTLDEHFII-DLHPEHSNVVIAAGFSGH-----GFKFSSGVGE 355 (389)
T ss_dssp HHHHHHHHHHHHHHCGGGCS-CEEEE----E-EEEEEECTTSCCEE-EEETTEEEEEEEECCTTC-----CGGGHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCC-CceEE----E-EEEeccCCCCCeEE-ccCCCCCCEEEEECCccc-----cccccHHHHH
Confidence 45568899999999998754 33322 2 22333455432111 112235799999877743 3455888999
Q ss_pred HHHHHHHHH
Q 009646 478 EAANRVVDY 486 (530)
Q Consensus 478 ~aA~~il~~ 486 (530)
.+|+.|+..
T Consensus 356 ~la~~i~~~ 364 (389)
T 2gf3_A 356 VLSQLALTG 364 (389)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHcCC
Confidence 999999854
No 46
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.52 E-value=4.6e-12 Score=126.38 Aligned_cols=56 Identities=27% Similarity=0.334 Sum_probs=44.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc-cccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD-ISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~-~g~~~~~~~~~~~~~~lg~~ 107 (530)
++||+|||||++|+++|+.|+++|++|+|+|+++.+|+... .+.. ..++++++|+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~-----~~~~~~~lg~~ 60 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGL-----SKGILNEADIK 60 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEE-----ETHHHHHTTCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCccccccc-----CHHHHHHcCCC
Confidence 48999999999999999999999999999999987776433 2211 12566778775
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.51 E-value=2.4e-12 Score=130.67 Aligned_cols=199 Identities=14% Similarity=0.065 Sum_probs=110.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEe---------------cCCCCeEEEEEECCeeE--ecCEEEEccChhhHHHhh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQELI 311 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~---------------~~~~g~v~~v~~~~~~~--~ad~VV~a~~~~~~~~ll 311 (530)
.+...|.+.+++.|++|+++++|++|.. ++ ++++.|.++++++ .||.||+|+|.+.. +++
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~-~l~ 258 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWSN-RLL 258 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGHH-HHH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCHH-HHH
Confidence 5778888888899999999999999987 44 5666777776688 99999999999854 354
Q ss_pred hhccccChHHHHhhccccceeEEEEEEEeccCCC-CCC----------C-CceeeccCCCccceeeeccccccccCCCC-
Q 009646 312 KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT-VPN----------V-SNACSGFGDSLAWTFFDLNKIYDEHKDDS- 378 (530)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~-~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 378 (530)
+.... .+...+.....+.++.+.. ... . ...+. + .. ..++- + ..+
T Consensus 259 ~~~g~----------~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~-~~-~~y~~-----p---~~~~ 316 (448)
T 3axb_A 259 NPLGI----------DTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLII--L-PK-RVLVR-----P---APRE 316 (448)
T ss_dssp GGGTC----------CCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEE--E-TT-TEEEE-----E---ETTT
T ss_pred HHcCC----------CCcccccceEEEEeCCcccccccccccccccccCCCceEE--c-CC-ceEEe-----e---cCCC
Confidence 43210 1122222222333432210 000 0 00010 0 00 01110 0 012
Q ss_pred CeEEEEEecC---CCCCCC--CCHHHH-HHHHHHHHhHhhcCCCCCccccceEEeCCCCceec-CCCCcccCCCCCCCCC
Q 009646 379 ATVIQADFYH---ANELMP--LKDDQV-VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHF-FPGSYKYMMRGFTSFP 451 (530)
Q Consensus 379 ~~~~~~~~~~---~~~~~~--~~~eei-~~~~l~~L~~~~p~~~~~~i~~~~~~~~~~a~~~~-~~g~~~~~~~~~~~~~ 451 (530)
+.++...... +..+.. ..+++. .+.+++.+.++||.+....+...|.. .... +++..... . ..+ +
T Consensus 317 g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G-----~r~~~t~d~~p~i-g-~~~-~ 388 (448)
T 3axb_A 317 GSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAG-----HYDISFDANPVVF-E-PWE-S 388 (448)
T ss_dssp TEEEEEECCCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEE-----EEEEETTSSCEEE-C-GGG-C
T ss_pred CeEEEecCCcccCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEE-----EeccccCCCCcEe-e-ecC-C
Confidence 3343322211 112222 334555 88899999999998765445433222 2223 44432111 1 112 7
Q ss_pred ceEEeeccccCCCCCCcchHHHHHHHHHHHHHHH
Q 009646 452 NLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 485 (530)
Q Consensus 452 ~l~~aG~~~~~g~~~~~iega~~sG~~aA~~il~ 485 (530)
|+|++..+.+.| +-.+...|+.+|+.|+.
T Consensus 389 ~l~~a~G~~g~G-----~~~ap~~g~~la~~i~~ 417 (448)
T 3axb_A 389 GIVVAAGTSGSG-----IMKSDSIGRVAAAVALG 417 (448)
T ss_dssp SEEEEECCTTCC-----GGGHHHHHHHHHHHHTT
T ss_pred CEEEEECCCchh-----HhHhHHHHHHHHHHHcC
Confidence 999988777433 44577788888888863
No 48
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.50 E-value=5e-12 Score=131.14 Aligned_cols=220 Identities=17% Similarity=0.065 Sum_probs=112.9
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC----C--eeEecCEEEEccChhhHHHhhhhccccChHH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGISTLQELIKNSILCNREE 321 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~----~--~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~ 321 (530)
.++...+.+.+.+.|++|+++++|++|..++ +++++|.+. + .++.|+.||+|+|+|... +.......
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~-l~~~~g~~---- 242 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDT-LREKDRSK---- 242 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHH-HHHTTTCC----
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcchHH-HHHhcCCC----
Confidence 4577788888889999999999999999986 776666653 2 379999999999998643 32211000
Q ss_pred HHhhccccceeEEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEe--cCCCCCCCCCHHH
Q 009646 322 FLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADF--YHANELMPLKDDQ 399 (530)
Q Consensus 322 ~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ee 399 (530)
......+....++.++.+.. +....+++... ..+..+|-. +. .+..++..+. +..+.......++
T Consensus 243 ----~~~~v~p~kG~~lvl~~~~~-~~~~~~~~~~~-~dgr~v~~i----P~---~g~~~iGtT~~~~~~~~~~~~~t~~ 309 (561)
T 3da1_A 243 ----HGKYLKLSKGVHLVVDQSRF-PLRQAVYFDTE-SDGRMIFAI----PR---EGKTYIGTTDTFYDKDIASPRMTVE 309 (561)
T ss_dssp ----CSSEEEEEEEEEEEEEGGGS-CCSSEEEECCS-SSCCCEEEE----EE---TTEEEECCCCEEECSCTTCCCCCHH
T ss_pred ----CCceEEeccEEEEEECCccC-CCceEEEeccC-CCCcEEEEE----ec---CCCEEEcCCCCccCCCcCCCCCCHH
Confidence 01222333345666765532 22222222110 111111110 10 1222222221 1112222334456
Q ss_pred HHHHHHHHHhHhhcCCC--CCccccceEEeCCCCceecCC-CCc---ccCCC-CCCCCCceE-Eee-ccccCCCCCCcch
Q 009646 400 VVAKAVSYLSKCIKDFS--TATVMDHKIRRFPKSLTHFFP-GSY---KYMMR-GFTSFPNLF-MAG-DWITTRHGSWSQE 470 (530)
Q Consensus 400 i~~~~l~~L~~~~p~~~--~~~i~~~~~~~~~~a~~~~~~-g~~---~~~~~-~~~~~~~l~-~aG-~~~~~g~~~~~ie 470 (530)
.++.+++.+.++||++. ...+...+..-. |.... +.. -.|.. +....+|++ ++| .++
T Consensus 310 ~i~~ll~~~~~~~P~l~~~~~~v~~~~aGlR----Pl~~~~~~~~~~~sR~~~i~~~~~gli~i~Ggk~T---------- 375 (561)
T 3da1_A 310 DRDYILAAANYMFPSLRLTADDVESSWAGLR----PLIHEEGKKASEISRKDEIFFSDSGLISIAGGKLT---------- 375 (561)
T ss_dssp HHHHHHHHHHHHCTTCCCCTTTEEEEEEEEE----EEEEC-----------CCEEECSSCCEEECCCCST----------
T ss_pred HHHHHHHHHHHhCCCCCCChhhEEEEeEEec----cccCCCCCCccccccceEEEecCCCeEEEeCChhh----------
Confidence 67889999999999865 444544433211 11111 110 01111 111225543 223 322
Q ss_pred HHHHHHHHHHHHHHHHhCCCCc--cccccCCCC
Q 009646 471 RSYVTGLEAANRVVDYLGDGSF--SKIIPVEED 501 (530)
Q Consensus 471 ga~~sG~~aA~~il~~~~~~~~--~~~~~~~~~ 501 (530)
.+-.-|..+++.+.+.++...+ .+-+||+.-
T Consensus 376 t~r~mAe~~~d~~~~~~~~~~~~~t~~~~l~g~ 408 (561)
T 3da1_A 376 GYRKMAERTVDAVAQGLNVNEPCTTAAIRLSGG 408 (561)
T ss_dssp THHHHHHHHHHHHHHHHTCCCCCCTTSCCCTTC
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCCcCCcccCCc
Confidence 1335678888888888875333 345666553
No 49
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.49 E-value=5.6e-13 Score=129.83 Aligned_cols=64 Identities=34% Similarity=0.529 Sum_probs=52.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC-CCCCCCcc--c------------cccc---------ccccHHHH
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG-NGFGSPDD--I------------SFWY---------PFRNIFSL 100 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~-~~~GG~~~--~------------g~~~---------~~~~~~~~ 100 (530)
...+||+|||||++||+||+.|+++|++|+|||++ +++||++. . ++.. .++.+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 45689999999999999999999999999999999 99999943 1 2211 13457889
Q ss_pred HHHhCCCC
Q 009646 101 VDELGIKP 108 (530)
Q Consensus 101 ~~~lg~~~ 108 (530)
++++|+..
T Consensus 122 ~~~lGl~~ 129 (376)
T 2e1m_A 122 IDKLGLKR 129 (376)
T ss_dssp HHHTTCCE
T ss_pred HHHcCCCc
Confidence 99999973
No 50
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.47 E-value=3.1e-12 Score=128.73 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-Ce--eEecCEEEEccChhh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE--TYSAGAVVLAVGIST 306 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~--~~~ad~VV~a~~~~~ 306 (530)
.+...|.+.+++.|++|+++++|++|..++ ++.++.+.+. |+ ++.||.||.|+|.+.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 355567777778899999999999999876 3444455555 44 599999999999875
No 51
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.46 E-value=5e-12 Score=124.97 Aligned_cols=60 Identities=18% Similarity=0.338 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIK 312 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~ 312 (530)
.+...|.+.+++.|++|+.+++|++|+.++ +.+ .|.++++++.||.||+|+|.+.. ++++
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~a~~vV~a~G~~s~-~l~~ 209 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGV-TIETADGEYQAKKAIVCAGTWVK-DLLP 209 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSE-EEEESSCEEEEEEEEECCGGGGG-GTST
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEE-EEEECCCeEEcCEEEEcCCccHH-hhcc
Confidence 577778888888999999999999999876 443 56677667999999999998853 3443
No 52
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.45 E-value=5.6e-11 Score=123.53 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE----CCe--eEecCEEEEccChhhHH
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~----~~~--~~~ad~VV~a~~~~~~~ 308 (530)
+++..+.+.+.+.|++|+.+++|++|..++ +++++|.. +++ ++.||.||+|+|+|...
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~ 252 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDK 252 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHH
Confidence 567778888888999999999999999886 66666663 332 79999999999999543
No 53
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.45 E-value=8.1e-12 Score=129.86 Aligned_cols=57 Identities=21% Similarity=0.148 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE--CC--eeEecCEEEEccChhhH
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGISTL 307 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~--~~--~~~~ad~VV~a~~~~~~ 307 (530)
.+...|.+.+++.|++++.+++|++|..++ +.++.|.+ +| .++.||.||.|.|.+..
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEESEEEECCGGGCH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcCEEEECCCCcch
Confidence 355567777788899999999999999864 33344444 45 47999999999998753
No 54
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.40 E-value=2.2e-11 Score=125.38 Aligned_cols=56 Identities=16% Similarity=0.158 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC---C--eeEecCEEEEccChhh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---K--ETYSAGAVVLAVGIST 306 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~---~--~~~~ad~VV~a~~~~~ 306 (530)
.+...|.+.+.+.|++|+++++|++|..++ +.+.+|... | .++.||.||.|.|.+.
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 355567777788899999999999999876 665544432 4 3799999999999874
No 55
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.40 E-value=1.5e-11 Score=123.01 Aligned_cols=61 Identities=25% Similarity=0.363 Sum_probs=42.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCC
Q 009646 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGI 106 (530)
Q Consensus 44 ~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~ 106 (530)
...++||+|||||++||++|+.|+++|++|+|+|+.+.++.. ..+. .-.++..++++++|+
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~-~~~~-~l~~~~~~~l~~lg~ 80 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPV-GAAI-SVWPNGVKCMAHLGM 80 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-----CEE-EECHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCc-CeeE-EECHHHHHHHHHCCC
Confidence 345689999999999999999999999999999998765321 1111 112344556666665
No 56
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.40 E-value=2.4e-12 Score=130.18 Aligned_cols=58 Identities=16% Similarity=0.284 Sum_probs=48.7
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCe-eEecCEEEEccChhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE-TYSAGAVVLAVGIST 306 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~-~~~ad~VV~a~~~~~ 306 (530)
...+.+.|.+.+++.|++|+++++|++|..++ ++++.|.+.++ ++.||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 34577888888888999999999999999876 66667777654 599999999999876
No 57
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=3.3e-12 Score=127.22 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=47.4
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 306 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~ 306 (530)
..+.+.|.+.+++.|++|+++++|++|..++ +. +.|.++++++.||.||+|+|.+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~-~~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SG-FRVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TE-EEEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CE-EEEEECCcEEEeeEEEECCCCcc
Confidence 3577788888888999999999999999876 44 46777777999999999999875
No 58
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.39 E-value=1.5e-10 Score=120.09 Aligned_cols=60 Identities=25% Similarity=0.380 Sum_probs=45.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
.++||+|||||++||++|+.|+++|.+|+|+||++.++.... + ..-.+...++++++|+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~-~-~~l~~~~~~~l~~lGl~ 63 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPR-A-AGQNPRTMELLRIGGVA 63 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCC-S-CCBCHHHHHHHHHTTCH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCc-c-ceECHHHHHHHHHcCCH
Confidence 468999999999999999999999999999999876542211 1 11234456677777764
No 59
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.36 E-value=3.3e-10 Score=123.55 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhH
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 307 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~ 307 (530)
.+...|.+.+++.|++|+++++|++|..++ ++++.|.++++++.||.||+|+|.+..
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWGA 208 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGHH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccchH
Confidence 577888888999999999999999999876 677778888779999999999999863
No 60
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.30 E-value=2.9e-10 Score=115.22 Aligned_cols=56 Identities=23% Similarity=0.254 Sum_probs=43.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE----CCe--eEecCEEEEccChhhH
Q 009646 250 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 307 (530)
Q Consensus 250 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 307 (530)
+.+.|.+.+.+.|++|+++++|++|..++ +.+.+|.. +|+ ++.||.||.|.|.+..
T Consensus 102 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 102 YNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 44456677777899999999999999876 66544443 454 7999999999998754
No 61
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.30 E-value=5.4e-11 Score=117.06 Aligned_cols=40 Identities=33% Similarity=0.541 Sum_probs=35.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG 84 (530)
..++||+|||||++|+++|++|+++|++|+|+|+....+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 4568999999999999999999999999999999875443
No 62
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.29 E-value=1.1e-10 Score=121.09 Aligned_cols=62 Identities=19% Similarity=0.094 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-C-eeEecCEEEEccChhhH-HHhh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGISTL-QELI 311 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~-~~~~ad~VV~a~~~~~~-~~ll 311 (530)
.+...|.+.+++.|++|+++++|++|+.++ ++..+.+... + .+++||.||.|.|.+-. ++.+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDA-EAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCS-SCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 355567777777899999999999999876 3432222223 4 48999999999998743 3444
No 63
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.29 E-value=3.2e-09 Score=110.63 Aligned_cols=41 Identities=29% Similarity=0.528 Sum_probs=37.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCeEEEEcCCCCCCCCc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQ------GFDVTVLDDGNGFGSPD 86 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~------G~~V~vlE~~~~~GG~~ 86 (530)
.++||+|||||++||++|+.|++. |++|+||||++.+|+.+
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 458999999999999999999999 99999999998888763
No 64
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.27 E-value=3.2e-10 Score=115.97 Aligned_cols=65 Identities=23% Similarity=0.282 Sum_probs=45.6
Q ss_pred CCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 41 NNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 41 ~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
+++...++||+|||||++||++|..|+++|++|+|+||.+.++... .+. .-.+...++++++|+.
T Consensus 5 ~~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~-r~~-~l~~~~~~~l~~lGl~ 69 (500)
T 2qa1_A 5 HHHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGES-RGL-GFTARTMEVFDQRGIL 69 (500)
T ss_dssp ---CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCC-CSE-EECHHHHHHHHTTTCG
T ss_pred cCCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC-Ccc-eECHHHHHHHHHCCCH
Confidence 4455677999999999999999999999999999999987664321 111 1123455666777664
No 65
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.27 E-value=1e-10 Score=116.79 Aligned_cols=55 Identities=16% Similarity=0.159 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceee---------EEEecCCCCeEEEEEECCeeEecCEEEEccChhh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 306 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~---------~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~ 306 (530)
.+...|.+.+++.|++|+++++|+ +|..++ +++ .|.++++++.||.||+|+|.+.
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccH
Confidence 477778888888999999999999 888765 555 6667667899999999999985
No 66
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.26 E-value=1.4e-10 Score=120.95 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=46.6
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE---CCe--eEecCEEEEccChhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 306 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~---~~~--~~~ad~VV~a~~~~~ 306 (530)
..+...|.+.+++.|++|+++++|++|..++ ++++++|.. +++ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 4577888888888999999999999999864 366655544 354 689999999999864
No 67
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.26 E-value=1e-11 Score=121.74 Aligned_cols=189 Identities=12% Similarity=0.044 Sum_probs=103.8
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccc
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 328 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l 328 (530)
.+...|.+.+++.|++|+. ++|++|+..+ + +.||.||+|+|.+... ++++ +
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--~-----------~~a~~VV~A~G~~s~~-l~~~--------------~ 193 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA--R-----------EGADVIVNCTGVWAGA-LQRD--------------P 193 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--H-----------TTCSEEEECCGGGGGG-TSCC--------------T
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--c-----------CCCCEEEECCCcChHh-hcCC--------------C
Confidence 5777888888899999998 8999886543 1 6799999999998643 4322 1
Q ss_pred cceeEEEEEEEeccCCCCCCCCceeecc--CCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHH
Q 009646 329 ASIDVVSVKLWFDKKVTVPNVSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVS 406 (530)
Q Consensus 329 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eei~~~~l~ 406 (530)
...+.....+.++.+. . ...++... .......++-+. .++.++..+.. ...+....+++..+.+++
T Consensus 194 ~l~p~rg~~~~~~~~~-~--~~~~~~~~~~~~~~~~~y~~p~--------~~~~~iGg~~~-~~~~~~~~~~~~~~~l~~ 261 (351)
T 3g3e_A 194 LLQPGRGQIMKVDAPW-M--KHFILTHDPERGIYNSPYIIPG--------TQTVTLGGIFQ-LGNWSELNNIQDHNTIWE 261 (351)
T ss_dssp TCEEEEEEEEEEECTT-C--CSEEEECCTTTCTTCSCEEEEC--------SSCEEEECCCE-ETCCCCSCCHHHHHHHHH
T ss_pred ceeecCCcEEEEeCCC-c--ceEEEeccccCCCCceeEEEeC--------CCcEEEeeeee-cCCCCCCCCHHHHHHHHH
Confidence 1222222234444331 1 11111110 000011111100 12222221111 112223345667788999
Q ss_pred HHhHhhcCCCCCccccceEEeCCCCceecCCCCccc---CCCCCCCCCceEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 009646 407 YLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY---MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRV 483 (530)
Q Consensus 407 ~L~~~~p~~~~~~i~~~~~~~~~~a~~~~~~g~~~~---~~~~~~~~~~l~~aG~~~~~g~~~~~iega~~sG~~aA~~i 483 (530)
.+.++||.+....+...|.. ....+|+ ... ........+|+|++..+.+. ++-.+...|+.+|+.|
T Consensus 262 ~~~~~~P~l~~~~i~~~w~G-----~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g~-----G~~~ap~~g~~la~li 330 (351)
T 3g3e_A 262 GCCRLEPTLKNARIIGERTG-----FRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGGY-----GLTIHWGCALEAAKLF 330 (351)
T ss_dssp HHHHHCGGGGGCEEEEEEEE-----EEEECSS-CEEEEEEECCSSSCEEEEEEECCTTC-----HHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCccCCcEeeeeEe-----eCCCCCC-ccceeeeccCCCCCCeEEEEeCCCcc-----hHhhhHHHHHHHHHHH
Confidence 99999998764444443332 3333444 210 01111235789988877743 4566888999999999
Q ss_pred HHHhCC
Q 009646 484 VDYLGD 489 (530)
Q Consensus 484 l~~~~~ 489 (530)
...++.
T Consensus 331 ~~~~~~ 336 (351)
T 3g3e_A 331 GRILEE 336 (351)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988763
No 68
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.25 E-value=9.8e-11 Score=120.44 Aligned_cols=57 Identities=21% Similarity=0.303 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC--Ce--eEecC-EEEEccChhh
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KE--TYSAG-AVVLAVGIST 306 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~--~~--~~~ad-~VV~a~~~~~ 306 (530)
.+...|.+.+++.|++|+++++|++|..++ +|++++|... ++ ++.|+ .||+|+|.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~-~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDD-TGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECT-TCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECC-CCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 588889999999999999999999999884 3777776653 43 68996 9999999875
No 69
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.23 E-value=1.2e-09 Score=112.08 Aligned_cols=58 Identities=19% Similarity=0.144 Sum_probs=46.4
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE----CCe--eEecCEEEEccChhhHH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~----~~~--~~~ad~VV~a~~~~~~~ 308 (530)
..+...+.+.+.+.|++|+.+++|++|..++ + ++.|.+ +++ ++.||.||+|+|+|...
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~ 212 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN--G-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQ 212 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--T-EEEEEEEETTTCCEEEEEESCEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--C-EEEEEEEECCCCCEEEEECCEEEECCChhHHH
Confidence 3577788888889999999999999999865 3 345554 344 79999999999999543
No 70
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.23 E-value=8.7e-11 Score=116.60 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=47.1
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEec----CCCCeEEEEEECCeeEecCEEEEccChhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 306 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~----~~~g~v~~v~~~~~~~~ad~VV~a~~~~~ 306 (530)
...+.+.|.+.+++.|++|+++++|++|..+ + +. +.|.++++++.||.||+|+|.+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~-~~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VR-FVLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CC-EEEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--Ce-EEEEECCCEEECCEEEECCCCcc
Confidence 3457778888888899999999999999876 4 33 35677777899999999999875
No 71
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.23 E-value=6.1e-10 Score=113.90 Aligned_cols=61 Identities=28% Similarity=0.313 Sum_probs=45.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
+.++||+|||||++||++|..|+++|++|+|+|+.+.++... .+. .-.+...++++++|+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~-r~~-~l~~~~~~~l~~lGl~ 70 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGES-RGL-GFTARTMEVFDQRGIL 70 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCC-CSE-EECHHHHHHHHHTTCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC-cee-EECHHHHHHHHHCCCH
Confidence 356899999999999999999999999999999987654221 111 1123455677777765
No 72
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.23 E-value=1.3e-09 Score=108.43 Aligned_cols=35 Identities=29% Similarity=0.512 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
++||+|||||++||++|+.|+++|++|+|+|+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999864
No 73
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.22 E-value=2.1e-10 Score=119.49 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=46.7
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE---CCe--eEecCEEEEccChhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 306 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~---~~~--~~~ad~VV~a~~~~~ 306 (530)
..+...|.+.+++.|++|+++++|++|..++ ++++++|.. +++ ++.||.||+|+|.+.
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVND-DHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECT-TSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECC-CCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 4577888888888999999999999998764 366665554 344 689999999999875
No 74
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.22 E-value=3.9e-09 Score=111.39 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=45.3
Q ss_pred CCCCCCCCcEEEECCCHHHHHHHHHHHH-CCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 41 NNNGKNKKKIVVVGSGWAGLGAAHHLSK-QGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 41 ~~~~~~~~dVvIIGaG~aGL~aA~~La~-~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
|...+.++||+|||||++||++|+.|++ .|++|+|+||.+..+..- .+ ..-.+...++++.+|+.
T Consensus 26 m~~~~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g-~a-~~l~~~t~e~l~~lGl~ 91 (639)
T 2dkh_A 26 TEAVPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELG-QA-DGIACRTMEMFEAFEFA 91 (639)
T ss_dssp CSSCCSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSC-SC-CEECHHHHHHHHHTTCH
T ss_pred cCCCCCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCC-ce-eeeCHHHHHHHHHcCcH
Confidence 3334456899999999999999999999 999999999987653211 01 11123345566666653
No 75
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.16 E-value=2.4e-10 Score=116.94 Aligned_cols=57 Identities=28% Similarity=0.292 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhH
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 307 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~ 307 (530)
.+.+.|.+.+++.|++|+++++|++|..++ +++..|.++ ++++.||.||+|+|.+..
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCChh
Confidence 366678888888899999999999999876 667777776 457999999999998763
No 76
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.15 E-value=1.7e-09 Score=108.24 Aligned_cols=60 Identities=20% Similarity=0.079 Sum_probs=43.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
++|+|||||++||++|..|+++|++|+|+||.+.+.-+..+.-+.-.++..+.++++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~ 61 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPA 61 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCCh
Confidence 689999999999999999999999999999976553221111111234455666777654
No 77
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.08 E-value=7.2e-10 Score=107.70 Aligned_cols=44 Identities=23% Similarity=0.295 Sum_probs=38.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcC----CCCCCCCcc
Q 009646 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD----GNGFGSPDD 87 (530)
Q Consensus 44 ~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~----~~~~GG~~~ 87 (530)
...++||+|||||++||++|+.|+++|++|+|+|+ +..+||.+.
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~ 66 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLT 66 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccc
Confidence 34568999999999999999999999999999999 447888854
No 78
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.05 E-value=4.7e-10 Score=119.58 Aligned_cols=69 Identities=22% Similarity=0.379 Sum_probs=53.2
Q ss_pred CCcceeecCcCCcCccCC--ccccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc
Q 009646 19 RNGFCCRASTLQSNANGD--RNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 87 (530)
....+|..|+....+.-. +.....+...++||+|||||++||+||+.|+++|++|+|+|+++.+||.+.
T Consensus 361 ~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 361 MSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp TSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHH
T ss_pred CCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEee
Confidence 345678888877765311 111223345678999999999999999999999999999999999999844
No 79
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.03 E-value=4.2e-09 Score=108.52 Aligned_cols=61 Identities=20% Similarity=0.238 Sum_probs=47.1
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeE--EEEEECC-e-eEecCEEEEccChhhHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVCGK-E-TYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v--~~v~~~~-~-~~~ad~VV~a~~~~~~~ 308 (530)
...+.+.+.+.+++.|++|+++++|++|..++ ++++ +.|.+++ + ++.||.||+|+|.....
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDA-NGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECT-TSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcC-CCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 34567778888899999999999999998754 3543 3456654 4 79999999999976443
No 80
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.03 E-value=4.3e-09 Score=109.52 Aligned_cols=58 Identities=22% Similarity=0.239 Sum_probs=45.3
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE---CCe--eEecCEEEEccChhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 306 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~---~~~--~~~ad~VV~a~~~~~ 306 (530)
..+...|.+.+++.|++|+++++|++|..++ ++++++|.. +++ ++.||.||+|+|...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~-~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDA-SGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECC-CCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 4577888888889999999999999998753 266665554 343 689999999999764
No 81
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.02 E-value=1.5e-09 Score=108.78 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=50.3
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|..++ +++..|.+. ++++.||.||+|+|......++
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~ 256 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIVPCVGAL 256 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCEESCHHH
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCccChHHH
Confidence 44567778888889999999999999999875 677677775 5689999999999976544443
No 82
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.01 E-value=4.6e-09 Score=109.40 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=46.6
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE----CCe--eEecCEEEEccChhhH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 307 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 307 (530)
..+...|.+.+.+.|++|+++++|++|..++ ++++.+|.. +++ ++.|+.||+|+|.+..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 4577888888888899999999999999862 266666653 243 6899999999998653
No 83
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.01 E-value=3.4e-09 Score=100.12 Aligned_cols=40 Identities=35% Similarity=0.552 Sum_probs=36.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~-G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|+.|+++ |.+|+|+|+++.+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 457999999999999999999997 9999999999888764
No 84
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.00 E-value=6e-10 Score=111.08 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHhc-CCEEEcCceeeEEEecCCCCeEE-EEEEC-CeeEecCEEEEccChhhH-HHhh
Q 009646 249 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVCG-KETYSAGAVVLAVGISTL-QELI 311 (530)
Q Consensus 249 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~-~v~~~-~~~~~ad~VV~a~~~~~~-~~ll 311 (530)
.+.+.|.+.+.+. |++|+++++|++|+.++ +.++ .|.+. ++++.||.||.|.|.+.. ++.+
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 4666688888887 99999999999999876 4442 45554 558999999999998754 3444
No 85
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.99 E-value=4.9e-09 Score=103.60 Aligned_cols=59 Identities=27% Similarity=0.516 Sum_probs=43.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGI 106 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~ 106 (530)
.++||+|||||++|+++|+.|+++|++|+|+|+++.+++. ..+. .-.+...++++++|+
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~-~~~~-~l~~~~~~~l~~~g~ 68 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF-GAGI-YLWHNGLRVLEGLGA 68 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC-SSEE-EEEHHHHHHHHHTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC-CceE-EeCccHHHHHHHcCC
Confidence 4589999999999999999999999999999998877542 1111 112334455666654
No 86
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.99 E-value=4.4e-09 Score=110.48 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=46.8
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE---C-Ce--eEecCEEEEccChhhH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGISTL 307 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~---~-~~--~~~ad~VV~a~~~~~~ 307 (530)
..+...|.+.+.+.|++|+.+++|++|..++ +++.+|.. . ++ .+.|+.||+|+|.+..
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 3577888888888899999999999998865 77666654 2 33 4899999999998753
No 87
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.99 E-value=1.9e-09 Score=105.59 Aligned_cols=39 Identities=31% Similarity=0.552 Sum_probs=37.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|+++|+.|+++|++|+|+|+++.+||.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~ 41 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA 41 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 479999999999999999999999999999999999875
No 88
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.98 E-value=1.1e-09 Score=111.41 Aligned_cols=61 Identities=15% Similarity=0.109 Sum_probs=47.0
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEE-ECCeeEecCEEEEccChhhHHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-CGKETYSAGAVVLAVGISTLQE 309 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~-~~~~~~~ad~VV~a~~~~~~~~ 309 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++. +.|. ++++++.+|.||+|+|......
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~g~i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADA-DGR-RVATTMKHGEIVADQVMLALGRMPNTN 271 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSC-EEEEESSSCEEEESEEEECSCEEESCT
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CCE-EEEEEcCCCeEEeCEEEEeeCcccCCC
Confidence 44567778888899999999999999999875 343 3455 5544499999999999765443
No 89
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.98 E-value=7.2e-09 Score=108.03 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=47.3
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE----CCe--eEecCEEEEccChhhH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 307 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 307 (530)
..+...|.+.+.+.|++|+.+++|++|..++ +++.+|.. +++ .+.|+.||+|+|.+..
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 3578888888888999999999999999876 77766654 243 6899999999998753
No 90
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.97 E-value=6.8e-10 Score=113.45 Aligned_cols=59 Identities=24% Similarity=0.269 Sum_probs=46.4
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~ 308 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+ .|.+. ++++.+|.||+|+|.....
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEECCCcEEEcCEEEEeeCCCcCC
Confidence 34567778888888999999999999999876 444 45554 5589999999999975433
No 91
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.96 E-value=1e-08 Score=102.22 Aligned_cols=63 Identities=22% Similarity=0.258 Sum_probs=50.5
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|..++ +++..|.+. ++++.||.||+|+|......++
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~ 246 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIA 246 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEEECCHHH
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCccCHHHH
Confidence 44567778888889999999999999999876 677777775 5589999999999976444343
No 92
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.96 E-value=5.5e-09 Score=107.70 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=35.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
..++||+|||||++||+||+.|++ |.+|+||||.+..+|.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 345899999999999999999999 9999999999877765
No 93
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.96 E-value=4e-09 Score=100.83 Aligned_cols=41 Identities=24% Similarity=0.354 Sum_probs=33.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009646 43 NGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (530)
Q Consensus 43 ~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG 84 (530)
+.+..|||+|||||++||+||.+|+++|++|+|+|++. .||
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg 42 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRN 42 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGG
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCC
Confidence 34667999999999999999999999999999999864 444
No 94
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.96 E-value=1.3e-09 Score=105.57 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=36.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++||++|+.|+++|++|+|+|+++.+||.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~ 45 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQ 45 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 479999999999999999999999999999999999875
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.95 E-value=5.6e-09 Score=107.71 Aligned_cols=41 Identities=24% Similarity=0.462 Sum_probs=38.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGt 47 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGT 47 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc
Confidence 45689999999999999999999999999999999999985
No 96
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.93 E-value=6.3e-09 Score=105.98 Aligned_cols=64 Identities=19% Similarity=0.258 Sum_probs=49.4
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
....+.+.+.+.+++.|++|+++++|++|+.++ +++..+..+++++.+|.||+|+|......++
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~ 263 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITDKRTLDADLVILAAGVSPNTQLA 263 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEESSCEEECSEEEECSCEEECCHHH
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeCCCEEEcCEEEECCCCCcCHHHH
Confidence 345567778888899999999999999998865 5555444566789999999999986443333
No 97
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.92 E-value=6.8e-09 Score=105.87 Aligned_cols=58 Identities=17% Similarity=0.201 Sum_probs=44.4
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC---eeEecCEEEEccChhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK---ETYSAGAVVLAVGIST 306 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~---~~~~ad~VV~a~~~~~ 306 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+.....++ .++.+|.||+|+|...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN--KQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS--SCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 44567778888889999999999999999876 4433333332 4799999999999654
No 98
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.92 E-value=5.8e-09 Score=103.80 Aligned_cols=61 Identities=21% Similarity=0.261 Sum_probs=43.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCccc-ccccccccHHHHHHHhCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDI-SFWYPFRNIFSLVDELGI 106 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~-g~~~~~~~~~~~~~~lg~ 106 (530)
.++||+|||||++||++|..|+++|++|+|+|+.+.++.+..+ ++.....+..+.++++|+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl 86 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGL 86 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcCh
Confidence 4589999999999999999999999999999998776544221 111111233455556555
No 99
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.91 E-value=4.7e-09 Score=107.29 Aligned_cols=40 Identities=33% Similarity=0.416 Sum_probs=36.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG 84 (530)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4568999999999999999999999999999999987764
No 100
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.91 E-value=4.9e-09 Score=106.12 Aligned_cols=61 Identities=10% Similarity=0.072 Sum_probs=48.7
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQEL 310 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~l 310 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +++ .|.++++++.||.||+|+|......+
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~~~g~i~aD~Vv~A~G~~p~~~~ 248 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLETSEQEISCDSGIFALNLHPQLAY 248 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEESSCEEEESEEEECSCCBCCCSS
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEECCCEEEeCEEEECcCCCCChHH
Confidence 45567778888899999999999999998765 555 56677669999999999997644333
No 101
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.91 E-value=2.8e-09 Score=110.00 Aligned_cols=41 Identities=37% Similarity=0.621 Sum_probs=37.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
..++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGt 59 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGV 59 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCc
Confidence 45689999999999999999999999999999999999985
No 102
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.90 E-value=6.6e-09 Score=103.37 Aligned_cols=62 Identities=26% Similarity=0.271 Sum_probs=45.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIKP 108 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~~ 108 (530)
.++||+|||||++||++|..|+++|++|+|+|+.+........|. .-.++..++++++|+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~-~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGI-VVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEE-ECCHHHHHHHHHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccc-ccChhHHHHHHHcCCcc
Confidence 458999999999999999999999999999999876411111121 12345667778887753
No 103
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.89 E-value=6.1e-09 Score=101.05 Aligned_cols=40 Identities=23% Similarity=0.375 Sum_probs=37.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|+.|+++|++|+|+|+++.+||.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~ 43 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQ 43 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 4589999999999999999999999999999999888864
No 104
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.87 E-value=6.6e-09 Score=99.05 Aligned_cols=40 Identities=35% Similarity=0.537 Sum_probs=36.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~~~~GG~ 85 (530)
..+||+|||||++||++|+.|+++ |++|+|+|+++.+||.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg 119 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG 119 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc
Confidence 358999999999999999999997 9999999999887753
No 105
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.87 E-value=1.7e-08 Score=104.45 Aligned_cols=57 Identities=19% Similarity=0.207 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC-eeEecCEEEEccChhhH
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGISTL 307 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~-~~~~ad~VV~a~~~~~~ 307 (530)
.+...|.+.+++.|++++.+ +|++|..++ ++.++.|.+.+ +++.||.||.|.|.+..
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 46667788888889999999 899998865 46555676654 48999999999998743
No 106
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.86 E-value=1.3e-08 Score=102.93 Aligned_cols=64 Identities=14% Similarity=0.230 Sum_probs=50.7
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
....+.+.+.+.+++.|++|+++++|++|+.++ +++..+..+++++.+|.||+|+|......++
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFRPNTELL 252 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEEECCGGG
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCCCCHHHH
Confidence 344567778888899999999999999998754 6665566677789999999999976544444
No 107
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.86 E-value=3.7e-08 Score=103.21 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=46.2
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+ +..+++++.+|.||+|+|......++
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v--~~~~g~~i~~D~Vi~a~G~~p~~~~l 287 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG--AVV--RLKSGSVIQTDMLILAIGVQPESSLA 287 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--TEE--EETTSCEEECSEEEECSCEEECCHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC--CEE--EECCCCEEEcCEEEEccCCCCChHHH
Confidence 34567778888899999999999999998765 422 22346689999999999976443343
No 108
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.86 E-value=4.3e-09 Score=107.05 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=36.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-----CeEEEEcCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQG-----FDVTVLDDGNGFGS 84 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G-----~~V~vlE~~~~~GG 84 (530)
..+||+|||||++||++|..|++.| .+|+|||+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 5679999999999999999999999 99999999988873
No 109
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.86 E-value=2.8e-08 Score=90.77 Aligned_cols=53 Identities=15% Similarity=0.053 Sum_probs=41.2
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChh
Q 009646 250 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 305 (530)
Q Consensus 250 l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~ 305 (530)
+...+.+.+++. |++++ +++|++|..++ ++++.|.++ ++++.||.||+|+|.+
T Consensus 70 ~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 70 FHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCC
Confidence 344466677776 89998 67999999876 666667765 4589999999999975
No 110
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.85 E-value=3.7e-08 Score=99.93 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=45.4
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE--CCeeEecCEEEEccChhhH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGISTL 307 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~--~~~~~~ad~VV~a~~~~~~ 307 (530)
..+...|.+.+++.|++|+.+++| +|..++ +++.++.. .++++.||.||+|+|....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 356777888887789999999999 998876 77766654 3457889999999998753
No 111
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.85 E-value=6.9e-09 Score=100.00 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=34.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++||++|+.|+++|++|+|+|++ +||.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~ 51 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQ 51 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCe
Confidence 589999999999999999999999999999998 7775
No 112
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.84 E-value=1.5e-08 Score=99.27 Aligned_cols=40 Identities=15% Similarity=0.374 Sum_probs=37.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|+.|+++|++|+|+|+++.+||.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~ 52 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQ 52 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc
Confidence 4589999999999999999999999999999999888864
No 113
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.84 E-value=1.9e-08 Score=102.28 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=47.8
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~ 308 (530)
...+.+.+.+.+++.|++|+++++|++|..++ +. +.+.++++++.+|.||+|+|.+...
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GE-FVLTTTHGELRADKLLVATGRTPNT 273 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET--TE-EEEEETTEEEEESEEEECSCEEESC
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CE-EEEEECCcEEEcCEEEECCCCCcCC
Confidence 34567778888899999999999999998765 43 3566777899999999999986543
No 114
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.84 E-value=1.8e-08 Score=105.14 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=46.4
Q ss_pred chhHHHHHHHHHhcC-CEEEcCceeeEEEecCCCCeEEEEEE----CCe--eEecCEEEEccChhhH
Q 009646 248 EKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 307 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 307 (530)
..+...|.+.+.+.| ++|+++++|++|..++ +++.+|.. +++ ++.|+.||+|+|.+..
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 357778888888888 9999999999999876 76655542 354 6899999999998653
No 115
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.84 E-value=1e-08 Score=98.39 Aligned_cols=41 Identities=22% Similarity=0.331 Sum_probs=37.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEE-EcCCCCCCCCcc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTV-LDDGNGFGSPDD 87 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~v-lE~~~~~GG~~~ 87 (530)
.++||+|||||++||+||..|+++|++|+| +|+ +.+||.+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceee
Confidence 458999999999999999999999999999 999 67888743
No 116
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.84 E-value=1.3e-06 Score=92.37 Aligned_cols=59 Identities=24% Similarity=0.204 Sum_probs=44.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSK-----QGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~-----~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
++||+|||||++||++|..|++ .|++|+|+|+.+..... ..-..-.+...++++++|+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~--gra~~l~~~tle~l~~lGl~ 71 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYN--GQADGLQCRTLESLKNLGLA 71 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCS--CSCCEECHHHHHHHHTTTCH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCC--CceeEEChHHHHHHHHCCCH
Confidence 5799999999999999999999 99999999997654211 11111234567788888875
No 117
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.83 E-value=1.4e-08 Score=107.88 Aligned_cols=65 Identities=25% Similarity=0.315 Sum_probs=50.5
Q ss_pred CcceeecCcCCcCccCCccccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc
Q 009646 20 NGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 87 (530)
...+|..|+....+.. +...+...++||+|||||++|++||..|+++|++|+|+|+++.+||.+.
T Consensus 349 ~~~~C~~np~~~~e~~---~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 349 KVTSCLVNPRACHETK---MPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CCCCCSSCTTTTCTTT---SCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CceEEEeCcccccccc---cCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 3456777776655531 1112334568999999999999999999999999999999999999854
No 118
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.83 E-value=1.1e-08 Score=103.78 Aligned_cols=59 Identities=22% Similarity=0.238 Sum_probs=46.2
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCeeEecCEEEEccChhhHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~~~~ad~VV~a~~~~~~~ 308 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+ .+.+ +++++.+|.||+|+|.....
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGA-RVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCCeEEEcCEEEECcCCCcCC
Confidence 34567778888888999999999999999775 443 4444 46689999999999976443
No 119
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.83 E-value=4e-08 Score=101.19 Aligned_cols=57 Identities=23% Similarity=0.186 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC-eeEecCEEEEccChhhH
Q 009646 249 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGISTL 307 (530)
Q Consensus 249 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~-~~~~ad~VV~a~~~~~~ 307 (530)
.+...|.+.+.+.|++++.+ +|++|..++ ++.++.|.+.+ +++.||.||.|.|.+..
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 46667788888889999999 999999855 46666677664 48999999999998743
No 120
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.83 E-value=1.8e-08 Score=101.88 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCeeEecCEEEEccChhhH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 307 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~~~~ad~VV~a~~~~~~ 307 (530)
...+.+.+.+.+++.|++++++++|++|+.++ ++.+ .+.. +++++.+|.||+|+|....
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~-~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 207 DPMISETLVEVMNAEGPQLHTNAIPKAVVKNT-DGSL-TLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp CHHHHHHHHHHHHHHSCEEECSCCEEEEEECT-TSCE-EEEETTSCEEEESEEEECSCEEES
T ss_pred hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CcEE-EEEECCCcEEEcCEEEECCCCCcC
Confidence 34566778888888999999999999998764 2433 4455 4558999999999997643
No 121
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.82 E-value=1.2e-08 Score=103.80 Aligned_cols=39 Identities=21% Similarity=0.413 Sum_probs=37.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|++||.+|++.|++|+|+|+++.+||.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 40 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGT 40 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCc
Confidence 489999999999999999999999999999999889886
No 122
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.82 E-value=3.8e-08 Score=102.06 Aligned_cols=56 Identities=16% Similarity=0.174 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHhc-CCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhh
Q 009646 249 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 306 (530)
Q Consensus 249 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~ 306 (530)
.+...|.+.+++. |++++++ +|++|..++ ++.++.|.+. |+++.||.||.|+|.+.
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEECCEEEECCCCch
Confidence 4667788888888 9999999 999998865 4666667765 45799999999999864
No 123
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.81 E-value=6.6e-08 Score=99.77 Aligned_cols=56 Identities=13% Similarity=0.191 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHh-cCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhh
Q 009646 249 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 306 (530)
Q Consensus 249 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~ 306 (530)
.+...|.+.+++ .|++++.+ +|++|..++ ++.++.|.+. |+++.||.||.|.|.+.
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQ-HGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecC-CCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 356667777777 89999999 699998865 4655566664 46799999999999874
No 124
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.80 E-value=2.2e-08 Score=100.05 Aligned_cols=59 Identities=24% Similarity=0.407 Sum_probs=42.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCe-EEEEcCCCCCCCCcccccccccccHHHHHHHhCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFD-VTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGI 106 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~-V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~ 106 (530)
.++||+|||||++||++|..|+++|++ |+|+|+.+.++.. ..+. .-.++..++++++|+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~-g~g~-~l~~~~~~~l~~lg~ 62 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL-GVGI-NIQPAAVEALAELGL 62 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCC-SCEE-EECHHHHHHHHHTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccc-eeEE-EEChHHHHHHHHCCC
Confidence 358999999999999999999999999 9999998766432 1111 112334455566554
No 125
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.80 E-value=3.9e-08 Score=100.26 Aligned_cols=60 Identities=13% Similarity=0.079 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC--------eeEecCEEEEccChhhH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--------ETYSAGAVVLAVGISTL 307 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~--------~~~~ad~VV~a~~~~~~ 307 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++..+.+...+ +++.+|.||+|+|....
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTL-SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECS-SSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 44566778888889999999999999998765 35223444432 57899999999996543
No 126
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.80 E-value=3.8e-09 Score=108.31 Aligned_cols=61 Identities=11% Similarity=0.109 Sum_probs=47.3
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQEL 310 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~l 310 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+ .+..+ ++++.+|.||+|+|......+
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG--AGV-LVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEEECCSS
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEE-EEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 34567778888899999999999999998765 444 34444 568999999999997754434
No 127
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.80 E-value=4.1e-08 Score=100.37 Aligned_cols=62 Identities=19% Similarity=0.310 Sum_probs=47.8
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|..+ +++..+..+++++.+|.||+|+|......++
T Consensus 235 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~v~~v~~~g~~i~~D~Vi~a~G~~p~~~ll 296 (490)
T 2bc0_A 235 DRDLTDLMAKNMEEHGIQLAFGETVKEVAGN---GKVEKIITDKNEYDVDMVILAVGFRPNTTLG 296 (490)
T ss_dssp CHHHHHHHHHHHHTTTCEEEETCCEEEEECS---SSCCEEEESSCEEECSEEEECCCEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC---CcEEEEEECCcEEECCEEEECCCCCcChHHH
Confidence 4456677888888999999999999999863 4444456677789999999999976444333
No 128
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.79 E-value=9.8e-09 Score=105.77 Aligned_cols=40 Identities=30% Similarity=0.589 Sum_probs=37.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHH-HCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLS-KQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La-~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|..|+ +.|++|+|+|+++.+||.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGt 47 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGT 47 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCc
Confidence 3589999999999999999999 889999999999999985
No 129
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.79 E-value=4.7e-08 Score=99.11 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=45.0
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCe-eEecCEEEEccChhhH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGISTL 307 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~-~~~ad~VV~a~~~~~~ 307 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +. +.+.+ +++ ++.+|.||+|+|....
T Consensus 206 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 206 DPLLSATLAENMHAQGIETHLEFAVAALERDA--QG-TTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEESSCCEEEEEEET--TE-EEEEETTCCEEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 34566778888889999999999999998765 33 34555 455 7999999999997643
No 130
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.78 E-value=1.3e-08 Score=104.07 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=46.3
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~ 308 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++.+ .|.++ ++++.+|.||+|+|.....
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~-~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNA-DGTR-HVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECT-TSCE-EEEETTSCEEEESEEEECSCEEESC
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEE-EEEECCCcEEEcCEEEEccCCCcCc
Confidence 34567778888899999999999999998765 2333 45554 5589999999999976443
No 131
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.77 E-value=1.8e-08 Score=103.49 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=42.7
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhh
Q 009646 250 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 306 (530)
Q Consensus 250 l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~ 306 (530)
+...+.+.+++ .|++| ++++|++|..++ +++.+|.+. |.++.|+.||+|+|.+.
T Consensus 125 ~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 125 YREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 45556777777 59999 578999998876 777777776 55899999999999864
No 132
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.77 E-value=3.2e-08 Score=97.34 Aligned_cols=38 Identities=37% Similarity=0.733 Sum_probs=35.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|+++|+.|++.|+ +|+|+|+++ +||.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~ 42 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHS 42 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCc
Confidence 5799999999999999999999999 999999988 8763
No 133
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.77 E-value=2.2e-08 Score=103.71 Aligned_cols=41 Identities=29% Similarity=0.511 Sum_probs=38.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
+..+||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~ 54 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGV 54 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc
Confidence 34689999999999999999999999999999999999985
No 134
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.77 E-value=1.3e-08 Score=103.59 Aligned_cols=40 Identities=25% Similarity=0.451 Sum_probs=37.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGT 44 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCc
Confidence 3589999999999999999999999999999999889886
No 135
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.76 E-value=3.7e-08 Score=102.74 Aligned_cols=63 Identities=14% Similarity=0.280 Sum_probs=47.0
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEec------------------CCCCeEEEEEECCeeEecCEEEEccChhhHHH
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVCGKETYSAGAVVLAVGISTLQE 309 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~------------------~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ 309 (530)
..+.+.+.+.+++.|++++++++|++|..+ . ++++..+..+++++.||.||+|+|......
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 270 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI-KGHLSLTLSNGELLETDLLIMAIGVRPETQ 270 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCT-TCEEEEEETTSCEEEESEEEECSCEEECCH
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccC-CCcEEEEEcCCCEEEcCEEEECcCCccchH
Confidence 456667778888999999999999999873 2 255544444567899999999999764433
Q ss_pred hh
Q 009646 310 LI 311 (530)
Q Consensus 310 ll 311 (530)
++
T Consensus 271 l~ 272 (565)
T 3ntd_A 271 LA 272 (565)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 136
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.76 E-value=2.2e-08 Score=94.96 Aligned_cols=39 Identities=26% Similarity=0.497 Sum_probs=36.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~~~~GG~ 85 (530)
.+||+|||||++||++|+.|+++ |++|+|+|+++.+||.
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg 105 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc
Confidence 46999999999999999999998 9999999999888763
No 137
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.76 E-value=7.5e-08 Score=98.51 Aligned_cols=41 Identities=24% Similarity=0.442 Sum_probs=36.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~ 63 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGT 63 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 34589999999999999999999999999999999899985
No 138
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.75 E-value=2.3e-09 Score=93.27 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=68.5
Q ss_pred CCCCCCHHHHHHHHHHHHhHhh-cCCCCCccccc--eEEeCCC------CceecCCCCcc-cCCCCCCCCCceEEeeccc
Q 009646 391 ELMPLKDDQVVAKAVSYLSKCI-KDFSTATVMDH--KIRRFPK------SLTHFFPGSYK-YMMRGFTSFPNLFMAGDWI 460 (530)
Q Consensus 391 ~~~~~~~eei~~~~l~~L~~~~-p~~~~~~i~~~--~~~~~~~------a~~~~~~g~~~-~~~~~~~~~~~l~~aG~~~ 460 (530)
.+..++++++++.++++|.++| |+. ..+... ...+|.. ++..+.||+.. ..+....|.++|||||+++
T Consensus 50 ~~~~l~~~e~~~~~l~~L~~~~g~~~--~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~t 127 (181)
T 2e1m_C 50 RWDSFDDAERYGYALENLQSVHGRRI--EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEHV 127 (181)
T ss_dssp HHTTSCTTTTHHHHHHHHHHHHCGGG--GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGGG
T ss_pred HHHcCCHHHHHHHHHHHHHHHhCCCc--HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHHH
Confidence 3556788999999999999999 554 233233 4445522 23334677542 2333455778999999999
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHhCCC
Q 009646 461 TTRHGSWSQERSYVTGLEAANRVVDYLGDG 490 (530)
Q Consensus 461 ~~g~~~~~iega~~sG~~aA~~il~~~~~~ 490 (530)
+. ++ ++||||++||++||++|++.++..
T Consensus 128 s~-~~-g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 128 SL-KH-AWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp TT-ST-TSHHHHHHHHHHHHHHHHTCCC--
T ss_pred cC-Cc-cCHHHHHHHHHHHHHHHHHHhccC
Confidence 95 66 799999999999999999988753
No 139
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.75 E-value=4.8e-08 Score=99.69 Aligned_cols=63 Identities=17% Similarity=0.087 Sum_probs=45.2
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECC-----eeEecCEEEEccChhhHHHh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-----ETYSAGAVVLAVGISTLQEL 310 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~-----~~~~ad~VV~a~~~~~~~~l 310 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++.+.....++ .++.+|.||+|+|......+
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~ 293 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDD 293 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGG
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCcEEEEEecCCCCceeEEEcCEEEECcccccCcCc
Confidence 44567778888899999999999999998765 34432222222 27899999999997644333
No 140
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.75 E-value=2.1e-07 Score=91.96 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=47.2
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+ .+.. +++++.+|.||+|+|......++
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~i~~d~vv~a~G~~p~~~l~ 248 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGL-EAHLSDGEVIPCDLVVSAVGLRPRTELA 248 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEECCHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEE-EEEECCCCEEECCEEEECcCCCcCHHHH
Confidence 34566778888889999999999999998765 443 4444 46689999999999976543333
No 141
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.75 E-value=1.2e-08 Score=104.36 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=46.1
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 308 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~ 308 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++.+ .|.+. ++++.+|.||+|+|.....
T Consensus 234 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~-~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 234 DETIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSK-HVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCE-EEEETTSCEEEESEEEECSCEEECC
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceE-EEEECCCcEEEcCEEEECCCCcccc
Confidence 34567778888899999999999999998764 2333 45554 5589999999999976443
No 142
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.74 E-value=1.7e-07 Score=98.31 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHhc--CCEEEcCceeeEEEecCCC--CeEEEEEE----CCe--eEecCEEEEccChhh
Q 009646 249 KIFEPWMDSMRTR--GCEFLDGRRVTDFIYDEER--CCISDVVC----GKE--TYSAGAVVLAVGIST 306 (530)
Q Consensus 249 ~l~~~l~~~l~~~--G~~i~~~~~V~~I~~~~~~--g~v~~v~~----~~~--~~~ad~VV~a~~~~~ 306 (530)
.+...|.+.+.+. |++|+.++.|++|..++ + |++.+|.. +++ .+.|+.||+|+|...
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 4677788888887 99999999999999876 2 37777754 233 689999999999764
No 143
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.74 E-value=3.2e-08 Score=102.17 Aligned_cols=54 Identities=20% Similarity=0.174 Sum_probs=42.7
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhh
Q 009646 250 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 306 (530)
Q Consensus 250 l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~ 306 (530)
+...+.+.+++ .|++| ++++|+.|..++ +++.+|.+. |.++.||.||+|+|.+.
T Consensus 126 ~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 126 YRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 45556777777 59999 678999998876 677777775 55899999999999864
No 144
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.74 E-value=1.1e-07 Score=97.02 Aligned_cols=57 Identities=12% Similarity=0.076 Sum_probs=42.9
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-C----eeEecCEEEEccChh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K----ETYSAGAVVLAVGIS 305 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~----~~~~ad~VV~a~~~~ 305 (530)
+.+.+.+.+.+.|+++|++|+++++|++|+.+ +.+..+... + +++.||.||+|+|..
T Consensus 270 ~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 270 FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred CCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 45667778888899999999999999999753 333333332 2 369999999999854
No 145
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.73 E-value=5.7e-08 Score=84.90 Aligned_cols=52 Identities=15% Similarity=0.064 Sum_probs=40.0
Q ss_pred HHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhh
Q 009646 251 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 306 (530)
Q Consensus 251 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~ 306 (530)
.+.+.+.+++.|++++++ +|++|+.++ +. +.+.++++++.+|.||+|+|...
T Consensus 59 ~~~l~~~~~~~gv~v~~~-~v~~i~~~~--~~-~~v~~~~g~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 59 LRRLEAHARRYGAEVRPG-VVKGVRDMG--GV-FEVETEEGVEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHTTCEEEEC-CCCEEEECS--SS-EEEECSSCEEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHcCCEEEeC-EEEEEEEcC--CE-EEEEECCCEEEECEEEECCCCCC
Confidence 334566667889999999 999999875 33 34566555899999999999763
No 146
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.72 E-value=6.9e-08 Score=97.51 Aligned_cols=41 Identities=27% Similarity=0.358 Sum_probs=38.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCCCCCCCc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGNGFGSPD 86 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~~~~GG~~ 86 (530)
..+||+|||||++||++|..|++.|. +|+|+|+++.+||.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW 47 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee
Confidence 45899999999999999999999999 999999999999864
No 147
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.71 E-value=5.9e-08 Score=99.37 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCee-EecCEEEEccChhhHH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET-YSAGAVVLAVGISTLQ 308 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~~-~~ad~VV~a~~~~~~~ 308 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++.+ .+.. ++++ +.+|.||+|+|.....
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~-~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVS-DKNL-SIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTCE-EEEETTSCEEEEESEEEECCCBCCTT
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-CceE-EEEECCCcEEEECCEEEECCCCCcCC
Confidence 34567778888899999999999999998764 2433 3444 4556 9999999999976443
No 148
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.71 E-value=2.4e-07 Score=97.61 Aligned_cols=57 Identities=19% Similarity=0.264 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhc-CC-EEEcCceeeEEEecCCCC---eEEEEEE----CCe--eEecCEEEEccChhhH
Q 009646 249 KIFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEERC---CISDVVC----GKE--TYSAGAVVLAVGISTL 307 (530)
Q Consensus 249 ~l~~~l~~~l~~~-G~-~i~~~~~V~~I~~~~~~g---~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 307 (530)
.+...|.+.+++. |+ +|+.+++|++|..++ + ++.+|.. +++ .+.|+.||+|+|....
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDN--NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECT--TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC--CccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 3666777777777 99 999999999999876 4 7776653 243 6899999999998753
No 149
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.71 E-value=1.2e-07 Score=97.89 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=44.4
Q ss_pred HhcCCEEEcCceeeEEEecCC--CCeEEEEEEC---Ce--eEecC-EEEEccChhhHHHhhhhcc
Q 009646 259 RTRGCEFLDGRRVTDFIYDEE--RCCISDVVCG---KE--TYSAG-AVVLAVGISTLQELIKNSI 315 (530)
Q Consensus 259 ~~~G~~i~~~~~V~~I~~~~~--~g~v~~v~~~---~~--~~~ad-~VV~a~~~~~~~~ll~~~~ 315 (530)
.+.+.+|++++.|++|..+.. ++++++|+.. ++ ++.|+ -||+|+|.-...+||..+.
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSG 302 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSG 302 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcC
Confidence 456899999999999998721 2788888763 33 67886 5999999998888886553
No 150
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.70 E-value=4e-08 Score=98.05 Aligned_cols=61 Identities=16% Similarity=0.228 Sum_probs=46.3
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCeeEecCEEEEccChhhHHHhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
..+.+.+.+.+++.|++|+++++|++|..++ ++..|.. +++++.||.||+|+|......++
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~ 246 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEPADQLA 246 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEECCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCeecHHHH
Confidence 3456667778888999999999999998754 3345565 46689999999999976544343
No 151
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.70 E-value=1.6e-08 Score=97.57 Aligned_cols=62 Identities=21% Similarity=0.333 Sum_probs=48.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH--CCCeEEEEcCCCCCCCCcc-ccccccc----ccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSK--QGFDVTVLDDGNGFGSPDD-ISFWYPF----RNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~--~G~~V~vlE~~~~~GG~~~-~g~~~~~----~~~~~~~~~lg~~ 107 (530)
..+||+|||||++||+||++|++ .|++|+|+|+++.+||... .++..+. ..+..+++++|++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCE
Confidence 45799999999999999999986 4999999999999999855 4444332 2344566667665
No 152
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.69 E-value=9.1e-08 Score=91.61 Aligned_cols=37 Identities=24% Similarity=0.438 Sum_probs=33.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGSP 85 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~~~GG~ 85 (530)
+||+|||||++|+++|..|+++|+ +|+|+|++ .+||.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~ 39 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQ 39 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcc
Confidence 799999999999999999999999 99999995 56664
No 153
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.69 E-value=1.3e-07 Score=94.32 Aligned_cols=53 Identities=9% Similarity=-0.006 Sum_probs=41.8
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 306 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~ 306 (530)
..+.+.+.+.+++.|++++++++|++|+.+ + .+..+++++.+|.||+++|...
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~---~---v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH---E---IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS---E---EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC---e---EEECCCCEEeeeEEEECCCCCc
Confidence 456777888889999999999999999643 2 2334567899999999998654
No 154
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.68 E-value=8.9e-08 Score=92.33 Aligned_cols=39 Identities=28% Similarity=0.445 Sum_probs=35.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|..|++.|++|+|+|++ .+||.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 45 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQ 45 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcc
Confidence 3589999999999999999999999999999998 67764
No 155
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.68 E-value=1.5e-07 Score=95.40 Aligned_cols=39 Identities=15% Similarity=0.448 Sum_probs=36.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCe---EEEEcCCCCCCCCc
Q 009646 48 KKIVVVGSGWAGLGAAHHLSK---QGFD---VTVLDDGNGFGSPD 86 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~---~G~~---V~vlE~~~~~GG~~ 86 (530)
+||+|||||++||+||..|++ .|++ |+|+|+++.+||.+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w 47 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQW 47 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEe
Confidence 699999999999999999999 9999 99999999999863
No 156
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.68 E-value=5.3e-08 Score=94.26 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD 78 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~ 78 (530)
.++||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 358999999999999999999999999999998
No 157
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.67 E-value=3.2e-07 Score=92.05 Aligned_cols=63 Identities=21% Similarity=0.323 Sum_probs=48.0
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEe--cCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVCG-KETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~--~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|.. ++ +++..|.+. ++++.+|.||+|+|......++
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~ 255 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLIPNCELA 255 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEEECCHHH
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCCcCcchh
Confidence 345666778888889999999999999987 44 555566664 5689999999999976433343
No 158
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.67 E-value=2.3e-07 Score=94.41 Aligned_cols=40 Identities=25% Similarity=0.537 Sum_probs=37.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGT 44 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccc
Confidence 4689999999999999999999999999999999888885
No 159
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.66 E-value=8.2e-08 Score=98.40 Aligned_cols=64 Identities=14% Similarity=0.031 Sum_probs=49.5
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
..+.+.+.+.+.+++.|+++++++.|++++..+ +.+.....+++++.+|.|++|+|.....+.|
T Consensus 261 ~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L 324 (542)
T 4b1b_A 261 FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSDKTSELYDTVLYAIGRKGDIDGL 324 (542)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEEEEETTSCEEEESEEEECSCEEESCGGG
T ss_pred cchhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEEEEEcCCCeEEEEEEEEcccccCCcccc
Confidence 355677788888999999999999999999876 5544333446688999999999976544444
No 160
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.66 E-value=2.3e-07 Score=95.78 Aligned_cols=55 Identities=16% Similarity=0.055 Sum_probs=41.8
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhH
Q 009646 250 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 307 (530)
Q Consensus 250 l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~ 307 (530)
+...+.+.+++. |++|. +..|+.|..++ +++.+|.+. |.++.||.||+|+|.+..
T Consensus 119 l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 119 YSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 455566667764 89995 56999998876 777767765 558999999999998743
No 161
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.64 E-value=9.6e-08 Score=96.89 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=44.4
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE--C--Ce--eEecCEEEEccChhhH
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KE--TYSAGAVVLAVGISTL 307 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~--~--~~--~~~ad~VV~a~~~~~~ 307 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+. +.. + ++ ++.+|.||+|+|....
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGLH-VRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEEE-EEEeecCCCceeEEEcCEEEECCCcccC
Confidence 34566677888888999999999999998765 4432 333 4 55 7999999999996643
No 162
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.64 E-value=2.7e-07 Score=94.04 Aligned_cols=62 Identities=21% Similarity=0.275 Sum_probs=48.8
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|..+ +++..+.++++++.+|.||+|+|......++
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l 287 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN---ERVEAVETDKGTYKADLVLVSVGVKPNTDFL 287 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEETTEEEECSEEEECSCEEESCGGG
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEECCCEEEcCEEEECcCCCcChHHH
Confidence 3456677888888999999999999999864 3455677777899999999999976543344
No 163
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.63 E-value=2.3e-07 Score=87.97 Aligned_cols=35 Identities=29% Similarity=0.600 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
++||+|||||++||++|..|+++|++|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 37999999999999999999999999999999753
No 164
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.63 E-value=1.7e-07 Score=95.64 Aligned_cols=39 Identities=26% Similarity=0.486 Sum_probs=36.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~ 44 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGV 44 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCc
Confidence 589999999999999999999999999999998888874
No 165
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.63 E-value=9.2e-08 Score=97.52 Aligned_cols=40 Identities=25% Similarity=0.508 Sum_probs=37.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~ 43 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGT 43 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCc
Confidence 3589999999999999999999999999999998888874
No 166
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.61 E-value=6.1e-07 Score=90.06 Aligned_cols=60 Identities=10% Similarity=0.142 Sum_probs=45.6
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
....+.+.+.+.+++.|++++++++|++++.+ . .+..+++++.+|.||+|+|......++
T Consensus 186 ~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~--v~~~~g~~~~~D~vl~a~G~~Pn~~~~ 245 (437)
T 4eqs_A 186 MDADMNQPILDELDKREIPYRLNEEINAINGN----E--ITFKSGKVEHYDMIIEGVGTHPNSKFI 245 (437)
T ss_dssp SCGGGGHHHHHHHHHTTCCEEESCCEEEEETT----E--EEETTSCEEECSEEEECCCEEESCGGG
T ss_pred ccchhHHHHHHHhhccceEEEeccEEEEecCC----e--eeecCCeEEeeeeEEEEeceecCcHHH
Confidence 34567788899999999999999999998643 2 233457789999999999965433333
No 167
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.61 E-value=4e-07 Score=93.14 Aligned_cols=63 Identities=13% Similarity=0.110 Sum_probs=46.7
Q ss_pred HHHHHHHHhcC-CEEEcCceeeEEEecCCCCeEEEEEE---CC-----eeEecCEEEEccChhhHHHhhhhc
Q 009646 252 EPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELIKNS 314 (530)
Q Consensus 252 ~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g~v~~v~~---~~-----~~~~ad~VV~a~~~~~~~~ll~~~ 314 (530)
..+.+.+.++| ++|+++++|++|..+++++++++|.. ++ .++.|+.||+|+|.....++|...
T Consensus 225 ~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~S 296 (504)
T 1n4w_A 225 KTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRA 296 (504)
T ss_dssp TTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhc
Confidence 34455555565 99999999999998751137888876 34 268899999999999777776543
No 168
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.59 E-value=2.6e-07 Score=95.72 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=44.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
.++||+|||||++||++|..|+++|.+|+|+||.+.++.... +. .-.+...++++++|+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~-~~-~l~~~~~~~l~~lGl~ 84 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPR-VG-TIGPRSMELFRRWGVA 84 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCC-CC-EECHHHHHHHHHTTCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCc-ee-eeCHHHHHHHHHcCCh
Confidence 357999999999999999999999999999999877653211 11 1123455666777654
No 169
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.59 E-value=1.4e-07 Score=90.77 Aligned_cols=39 Identities=23% Similarity=0.351 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|+++|+.|+++|++|+|+|+. .+||.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 42 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQ 42 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCce
Confidence 3589999999999999999999999999999974 56653
No 170
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.58 E-value=7.9e-07 Score=89.74 Aligned_cols=62 Identities=23% Similarity=0.354 Sum_probs=47.5
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++..+.++++++.+|.||+|+|......++
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGDG---RVQKVVTDKNAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECSS---BCCEEEESSCEEECSEEEECSCEEESCGGG
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccC---cEEEEEECCCEEECCEEEECcCCCCChHHH
Confidence 34566778888888999999999999998653 333456677789999999999976443333
No 171
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.58 E-value=4.9e-07 Score=91.31 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=47.2
Q ss_pred CcchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEECCeeEecCEEEEccChhhHHHhh
Q 009646 246 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 246 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
....+.+.+.+.+++. ++++++++|++|..++ ++..+..+++++.+|.||+|+|......++
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~ 249 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIKPNIELA 249 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEEECCHHH
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCccCHHHH
Confidence 3445667778888888 9999999999998653 344566778899999999999976443343
No 172
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.58 E-value=2.3e-07 Score=95.87 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=43.9
Q ss_pred hcCCEEEcCceeeEEEecCCCCeEEEEEEC--Ce--eEecCEEEEccChhhHHHhhhhcc
Q 009646 260 TRGCEFLDGRRVTDFIYDEERCCISDVVCG--KE--TYSAGAVVLAVGISTLQELIKNSI 315 (530)
Q Consensus 260 ~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~--~~--~~~ad~VV~a~~~~~~~~ll~~~~ 315 (530)
+.+.+|++++.|++|..++ +++++|... ++ ++.|+.||+|+|.-.+.+||..+.
T Consensus 223 r~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SG 280 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSG 280 (526)
T ss_dssp CTTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred CCCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhhhcc
Confidence 4578999999999999987 777776653 33 678999999999999988887653
No 173
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.57 E-value=3.8e-07 Score=91.60 Aligned_cols=38 Identities=32% Similarity=0.594 Sum_probs=35.3
Q ss_pred CcEEEECCCHHHHHHHHHHHH--CCCeEEEEcCCCCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSK--QGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~--~G~~V~vlE~~~~~GG~ 85 (530)
+||+|||||++|+++|+.|++ .|++|+|+|+++..++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 699999999999999999999 78999999999887754
No 174
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.56 E-value=1.7e-07 Score=89.72 Aligned_cols=37 Identities=30% Similarity=0.524 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|+++|..|++.|++|+|+|+ ..||.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~ 37 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQ 37 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCce
Confidence 37999999999999999999999999999985 46664
No 175
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.56 E-value=1.9e-07 Score=91.98 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=33.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
..+++|+|||||++|++||..|...+.+|+|+|+++..+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 355799999999999999999977789999999987553
No 176
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.55 E-value=3.8e-07 Score=92.53 Aligned_cols=38 Identities=24% Similarity=0.414 Sum_probs=34.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|+++|..|++.|++|+|+|++ .+||.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~ 40 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCc
Confidence 479999999999999999999999999999997 67764
No 177
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.53 E-value=8.4e-07 Score=90.79 Aligned_cols=62 Identities=13% Similarity=0.095 Sum_probs=46.1
Q ss_pred HHHHHHHHhc-CCEEEcCceeeEEEecCCCC-eEEEEEE---CC-----eeEecCEEEEccChhhHHHhhhhc
Q 009646 252 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERC-CISDVVC---GK-----ETYSAGAVVLAVGISTLQELIKNS 314 (530)
Q Consensus 252 ~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g-~v~~v~~---~~-----~~~~ad~VV~a~~~~~~~~ll~~~ 314 (530)
..+...+.+. +++|+++++|++|..++ ++ ++++|.. ++ .++.|+.||+|+|.....++|...
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~-~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~S 301 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPAT-GSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSM 301 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECS-SSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECC-CCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhc
Confidence 3444444555 49999999999999875 34 6777776 34 268899999999999777676543
No 178
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.52 E-value=1.2e-06 Score=90.56 Aligned_cols=56 Identities=16% Similarity=0.180 Sum_probs=43.2
Q ss_pred HhcCCEEEcCceeeEEEecCCCCeEEEEEEC---Ce--eEec-CEEEEccChhhHHHhhhhc
Q 009646 259 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSA-GAVVLAVGISTLQELIKNS 314 (530)
Q Consensus 259 ~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~---~~--~~~a-d~VV~a~~~~~~~~ll~~~ 314 (530)
.+.+.+|++++.|++|..++.++++++|+.. ++ ++.| +.||+|+|.-...+||..+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~S 278 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLS 278 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHc
Confidence 3458999999999999998312778787763 43 5778 4699999999888887655
No 179
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.52 E-value=6.9e-07 Score=90.36 Aligned_cols=38 Identities=32% Similarity=0.521 Sum_probs=35.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|+++|..|++.|++|+|+|++ .+||.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~ 40 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGV 40 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCc
Confidence 489999999999999999999999999999998 77764
No 180
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.50 E-value=3.8e-07 Score=91.47 Aligned_cols=35 Identities=31% Similarity=0.560 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGF 82 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G--~~V~vlE~~~~~ 82 (530)
++|||||||.+|++||.+|++.+ ++|+|+|++++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 57999999999999999999865 799999998754
No 181
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=1.3e-06 Score=88.45 Aligned_cols=39 Identities=18% Similarity=0.411 Sum_probs=35.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
.++||+|||||++|++||.+|++.|++|+|+|+ +.+||.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~ 42 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGT 42 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCc
Confidence 358999999999999999999999999999999 678875
No 182
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.48 E-value=1.9e-06 Score=86.56 Aligned_cols=36 Identities=28% Similarity=0.589 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSK---QGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~---~G~~V~vlE~~~~~ 82 (530)
++||+|||||++|+++|..|++ .|++|+|+|+++..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4799999999999999999999 89999999999865
No 183
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.48 E-value=1.1e-07 Score=91.01 Aligned_cols=40 Identities=25% Similarity=0.379 Sum_probs=36.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
...|||+|||||++|++||.+|++.|++|+|+|++ .+||.
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~ 43 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQ 43 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCe
Confidence 34699999999999999999999999999999985 56765
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.46 E-value=1.1e-06 Score=90.17 Aligned_cols=39 Identities=28% Similarity=0.541 Sum_probs=34.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
...+||+|||||++|+++|.+|+++|++|+|+|+ ++||.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~ 248 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQ 248 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGG
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCc
Confidence 3568999999999999999999999999999986 46764
No 185
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.46 E-value=4.2e-07 Score=93.64 Aligned_cols=58 Identities=21% Similarity=0.106 Sum_probs=43.6
Q ss_pred HHhcCCEEEcCceeeEEEec---CCCCeEEEEEEC---C-e--eEec-CEEEEccChhhHHHhhhhcc
Q 009646 258 MRTRGCEFLDGRRVTDFIYD---EERCCISDVVCG---K-E--TYSA-GAVVLAVGISTLQELIKNSI 315 (530)
Q Consensus 258 l~~~G~~i~~~~~V~~I~~~---~~~g~v~~v~~~---~-~--~~~a-d~VV~a~~~~~~~~ll~~~~ 315 (530)
+.+.+.+|++++.|++|..+ ++++++++|+.. + + ++.| +.||+|+|.-...+||..+.
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSG 285 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSG 285 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTT
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcC
Confidence 35568999999999999987 212466677652 3 3 5778 67999999999888887653
No 186
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.42 E-value=4.2e-07 Score=90.39 Aligned_cols=37 Identities=30% Similarity=0.514 Sum_probs=32.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGFGS 84 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G--~~V~vlE~~~~~GG 84 (530)
++|||||||.+|++||.+|++.+ .+|+|+|+++....
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~ 41 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT 41 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC
Confidence 58999999999999999999876 58999999886433
No 187
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.42 E-value=1.3e-07 Score=90.57 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..|||+|||||+|||+||.+|++.|++|+|+|++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 469999999999999999999999999999998753
No 188
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.37 E-value=1.3e-06 Score=90.14 Aligned_cols=54 Identities=22% Similarity=0.278 Sum_probs=42.3
Q ss_pred hcCCEEEcCceeeEEEecCCCCeEEEEEEC----Ce--eEecC-EEEEccChhhHHHhhhhc
Q 009646 260 TRGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAG-AVVLAVGISTLQELIKNS 314 (530)
Q Consensus 260 ~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~----~~--~~~ad-~VV~a~~~~~~~~ll~~~ 314 (530)
+.|++|++++.|++|..++ ++++++|... ++ ++.|+ .||+|+|.....+||...
T Consensus 221 ~~~~~i~~~~~V~~i~~~~-~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~S 281 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDA-DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLS 281 (546)
T ss_dssp CTTEEEECSCEEEEEEECT-TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCCcEEEeCCEEEEEEECC-CCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhc
Confidence 5689999999999999864 3667777652 32 78898 899999997777676544
No 189
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=8.8e-07 Score=86.75 Aligned_cols=33 Identities=39% Similarity=0.560 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
.||+|||||++|++||..|++.| +|+|+|+++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 58999999999999999999999 9999999753
No 190
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.27 E-value=5.4e-07 Score=86.54 Aligned_cols=40 Identities=35% Similarity=0.548 Sum_probs=35.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD 86 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~ 86 (530)
.++||+|||||++|+++|+.|+++|++|+|+|+ ..+||.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 458999999999999999999999999999999 4677763
No 191
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.27 E-value=3.3e-06 Score=86.28 Aligned_cols=41 Identities=20% Similarity=0.052 Sum_probs=31.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009646 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (530)
Q Consensus 44 ~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG 84 (530)
....+||||||+|++||++|..|.++|...+++|+.+..|+
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 34568999999999999999999998877777777766654
No 192
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.26 E-value=7.2e-07 Score=89.77 Aligned_cols=43 Identities=33% Similarity=0.440 Sum_probs=39.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 87 (530)
...+||+|||||++||++|+.|+++|++|+|+|+++.+||.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 3568999999999999999999999999999999999999754
No 193
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.24 E-value=5.1e-07 Score=91.57 Aligned_cols=39 Identities=33% Similarity=0.542 Sum_probs=37.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~ 42 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGN 42 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 489999999999999999999999999999999999987
No 194
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.21 E-value=1.3e-06 Score=93.34 Aligned_cols=66 Identities=24% Similarity=0.392 Sum_probs=48.8
Q ss_pred cceeecCcCCcCccCCccc---cCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc
Q 009646 21 GFCCRASTLQSNANGDRNS---TNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 87 (530)
...|..++....+. ...| ...+...++||+|||||++||+||+.|+++|++|+|+|+++.+||.+.
T Consensus 361 ~~~C~~n~~~g~e~-~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 361 PMICTQNATAGEEY-RRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp CCCCSSCTTTTTHH-HHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred ceeeccCccccccc-cccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 34566666555431 0011 112234568999999999999999999999999999999999999854
No 195
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.19 E-value=7.9e-07 Score=90.52 Aligned_cols=59 Identities=8% Similarity=0.062 Sum_probs=44.9
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-C-eeEecCEEEEccChhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGIST 306 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~-~~~~ad~VV~a~~~~~ 306 (530)
...+.+.+.+.+++.|++|+++++|++|+.++ ++.++.|.++ | +++.+|.||+|+|...
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 34566778888888999999999999998764 2423345554 5 5899999999999653
No 196
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.19 E-value=1.1e-06 Score=91.96 Aligned_cols=40 Identities=33% Similarity=0.385 Sum_probs=37.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..||.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCc
Confidence 4689999999999999999999999999999999988875
No 197
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.19 E-value=9e-07 Score=88.73 Aligned_cols=35 Identities=43% Similarity=0.563 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.++||+|||||++||++|+.|+++|++|+|+|+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999976
No 198
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.17 E-value=1.6e-06 Score=89.00 Aligned_cols=40 Identities=33% Similarity=0.535 Sum_probs=36.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC--------CCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN--------GFGSP 85 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~--------~~GG~ 85 (530)
.++||+|||||++|++||..|++.|++|+|+|+++ .+||.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGt 78 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGT 78 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccc
Confidence 46899999999999999999999999999999964 57775
No 199
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.14 E-value=8.7e-07 Score=90.46 Aligned_cols=61 Identities=18% Similarity=0.059 Sum_probs=44.4
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE--CC--eeEecCEEEEccChhhHHHh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGISTLQEL 310 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~--~~--~~~~ad~VV~a~~~~~~~~l 310 (530)
...+.+.+.+.+++. ++|+++++|++|+.++ +.+..... +| +++.+|.||+|+|......+
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 345666777777777 9999999999999876 44432222 45 58999999999997644333
No 200
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.7e-06 Score=83.76 Aligned_cols=40 Identities=28% Similarity=0.457 Sum_probs=35.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
+.++||+|||||++|+++|+.|++.|++|+|+|+. .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 45689999999999999999999999999999975 67765
No 201
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.08 E-value=2.5e-06 Score=84.12 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=32.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNGF 82 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~~~~ 82 (530)
+||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998766
No 202
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.08 E-value=2.5e-06 Score=86.99 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=44.6
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEE-EEEC--Ce--eEecCEEEEccChhhHHHh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD-VVCG--KE--TYSAGAVVLAVGISTLQEL 310 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~-v~~~--~~--~~~ad~VV~a~~~~~~~~l 310 (530)
...+.+.+.+.+++.|++|+++++|++|...+ ++.+.. .... ++ ++.+|.||+|+|......+
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLP-TNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGG
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCc
Confidence 44567778888889999999999999998754 243322 2221 33 4789999999997644433
No 203
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.02 E-value=5.2e-06 Score=79.61 Aligned_cols=37 Identities=30% Similarity=0.384 Sum_probs=34.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG 84 (530)
+||+|||||.+|+.||+.|+++|++|+|+|+++..+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCC
Confidence 7999999999999999999999999999999875543
No 204
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=8.9e-05 Score=74.80 Aligned_cols=35 Identities=29% Similarity=0.564 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 47899999999999999999999999999998753
No 205
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.92 E-value=4.2e-06 Score=92.20 Aligned_cols=42 Identities=36% Similarity=0.461 Sum_probs=39.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 87 (530)
..+||+|||||++|++||..|++.|++|+|+|+++++||.+-
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 357999999999999999999999999999999999998854
No 206
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.92 E-value=0.00011 Score=74.63 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+++++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQI 218 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcc
Confidence 468999999999999999999999999999987644
No 207
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.91 E-value=3e-06 Score=86.45 Aligned_cols=40 Identities=25% Similarity=0.437 Sum_probs=37.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcc
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 87 (530)
.+||+|||||++|+++|+.|++. ++|+|+|+++++||.+-
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 46999999999999999999999 99999999999999843
No 208
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.00012 Score=74.32 Aligned_cols=37 Identities=30% Similarity=0.497 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
...+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 3468999999999999999999999999999988654
No 209
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.88 E-value=9.5e-06 Score=80.65 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=44.2
Q ss_pred cchhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCeeEecCEEEEccChhhHHHhh
Q 009646 247 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 247 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
...+.+.+.+.+++.|++|+++++|++|+ + + .|.. +++++.||.||+|+|......++
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 244 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D--G---VVLLDDGTRIAADMVVVGIGVLANDALA 244 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T--T---EEEETTSCEEECSEEEECSCEEECCHHH
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--C---EEEECCCCEEEcCEEEECcCCCccHHHH
Confidence 34566778888889999999999999998 4 4 2334 46689999999999976443343
No 210
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.88 E-value=7.4e-06 Score=82.48 Aligned_cols=41 Identities=27% Similarity=0.117 Sum_probs=37.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-C------CCeEEEEcCCCCCCCCcc
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSK-Q------GFDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~-~------G~~V~vlE~~~~~GG~~~ 87 (530)
++||+|||||++|++||..|++ . |++|+|+|+.+.+||.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 5799999999999999999999 7 999999999999988753
No 211
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.87 E-value=1e-05 Score=81.61 Aligned_cols=42 Identities=31% Similarity=0.251 Sum_probs=38.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCCCCCcc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGFGSPDD 87 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G--~~V~vlE~~~~~GG~~~ 87 (530)
.++||+|||||++|+.+|..|++.| ++|+|+|+.+.+||.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4579999999999999999999998 99999999999998754
No 212
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.85 E-value=1.1e-05 Score=89.58 Aligned_cols=41 Identities=27% Similarity=0.528 Sum_probs=37.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCCCc
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGSPD 86 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~~~GG~~ 86 (530)
..+||+|||||++||+||..|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 35799999999999999999999999 799999999999863
No 213
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.82 E-value=0.00013 Score=74.24 Aligned_cols=35 Identities=26% Similarity=0.447 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 56899999999999999999999999999998753
No 214
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.82 E-value=0.0002 Score=70.99 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 468999999999999999999999999999998654
No 215
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.80 E-value=0.00027 Score=71.42 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 46899999999999999999999999999998753
No 216
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.80 E-value=1.4e-05 Score=82.62 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=45.5
Q ss_pred HHHHHHh-cCCEEEcCceeeEEEecCCCCeEEEEEEC----Ce--eE---ecCEEEEccChhhHHHhhhhc
Q 009646 254 WMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TY---SAGAVVLAVGISTLQELIKNS 314 (530)
Q Consensus 254 l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~v~~~----~~--~~---~ad~VV~a~~~~~~~~ll~~~ 314 (530)
+.+.+.+ .|++|++++.|++|..++ +++.+|... ++ ++ .++.||+|+|.....+||...
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~s 269 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQS 269 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHc
Confidence 5555544 589999999999999876 778888774 32 33 789999999998877776554
No 217
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=0.00013 Score=73.66 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||||.+|+-+|..|++.|.+|+|+|+++++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 468999999999999999999999999999987543
No 218
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.74 E-value=2e-05 Score=82.58 Aligned_cols=35 Identities=34% Similarity=0.493 Sum_probs=32.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
...+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999973
No 219
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.71 E-value=0.00075 Score=68.13 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNGF 82 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~~~~ 82 (530)
...+|+|||||.+|+-+|..|++. |.+|+++++++.+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 356899999999999999999998 8999999987643
No 220
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.70 E-value=1e-05 Score=83.22 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=44.4
Q ss_pred HHHHHHhcCCEEEcCceeeEEEecCC-CCeEEEEEEC---Ce--eE---ecCEEEEccChhhHHHhhhhc
Q 009646 254 WMDSMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVCG---KE--TY---SAGAVVLAVGISTLQELIKNS 314 (530)
Q Consensus 254 l~~~l~~~G~~i~~~~~V~~I~~~~~-~g~v~~v~~~---~~--~~---~ad~VV~a~~~~~~~~ll~~~ 314 (530)
+.+.+.+.|++|++++.|++|..++. ++++++|... ++ ++ .++.||+|+|.....+||...
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~S 269 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLS 269 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHT
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHc
Confidence 33334567999999999999998751 1377777762 33 34 568999999998887777654
No 221
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.69 E-value=2.3e-05 Score=79.82 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=46.4
Q ss_pred chhHHHHHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEE-CCeeEecCEEEEccChhhHHHhh
Q 009646 248 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 248 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 311 (530)
..+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.. +++++.||.||+|+|......++
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~ 287 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLEPNVELA 287 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEEECCTTH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCCccHHHH
Confidence 3456677788888999999999999998765 544 4555 46689999999999976443333
No 222
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.66 E-value=0.00027 Score=71.52 Aligned_cols=36 Identities=33% Similarity=0.569 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 468999999999999999999999999999987533
No 223
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.65 E-value=0.00064 Score=69.16 Aligned_cols=38 Identities=29% Similarity=0.412 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
...+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 210 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA 210 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 35689999999999999999999999999999987653
No 224
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.65 E-value=0.00044 Score=70.33 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHH----CCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSK----QGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~----~G~~V~vlE~~~~ 81 (530)
..+|+|||||..|+-.|..|++ .|.+|+++++.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~ 218 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 218 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc
Confidence 4689999999999999999987 4789999997653
No 225
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.64 E-value=0.00059 Score=69.47 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
...+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 3468999999999999999999999999999987543
No 226
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.63 E-value=0.00046 Score=65.83 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 4689999999999999999999999999998763
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.56 E-value=0.00058 Score=66.57 Aligned_cols=33 Identities=27% Similarity=0.692 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 689999999999999999999999999999875
No 228
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.42 E-value=0.00013 Score=75.89 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=42.6
Q ss_pred HhcCCEEEcCceeeEEEecCCC--CeEEEEEE---CCe--eEec-CEEEEccChhhHHHhhhhc
Q 009646 259 RTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELIKNS 314 (530)
Q Consensus 259 ~~~G~~i~~~~~V~~I~~~~~~--g~v~~v~~---~~~--~~~a-d~VV~a~~~~~~~~ll~~~ 314 (530)
.+.+++|++++.|++|..++++ +++++|.. +++ ++.| +.||+|+|.....+||..+
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~S 305 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYS 305 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHT
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhC
Confidence 4568999999999999886411 46777764 344 6788 8899999998887777654
No 229
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.38 E-value=0.00073 Score=65.66 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4679999999999999999999999999998764
No 230
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.37 E-value=0.0026 Score=64.61 Aligned_cols=34 Identities=32% Similarity=0.485 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
...+|+|||||..|+-.|..|++.|.+|+|+++.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 3457999999999999999999999999999975
No 231
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.27 E-value=0.002 Score=66.27 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..++|+|||+|.+|+-.|..|++.+.+|+|++++++
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 446899999999999999999999999999999876
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.24 E-value=0.003 Score=60.47 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|..|+-.|..|++.|.+|+++++++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999999864
No 233
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.22 E-value=0.0016 Score=62.01 Aligned_cols=34 Identities=29% Similarity=0.356 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|..|+-.|..|++.|.+|+++++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 3679999999999999999999999999998753
No 234
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.20 E-value=0.00034 Score=56.13 Aligned_cols=112 Identities=10% Similarity=-0.010 Sum_probs=53.0
Q ss_pred CeeEecCEEEEccChhhHHHhhhhccccChHHHHhhccccceeEEEEEEEeccCCCCCCCCceeeccCCCccceeeeccc
Q 009646 290 KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNK 369 (530)
Q Consensus 290 ~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (530)
.++++||+||+|+|+..++.+.++++++ .....+++.+.+....|+.+.|+++||..... .+ +.+.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~---~g----------d~s~ 68 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWEFTEA---DW----------KREL 68 (130)
T ss_dssp CEEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGCCHH---HH----------HHHH
T ss_pred ceEEEcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCCCCCc---cc----------cccC
Confidence 3578999999999999999888776664 34456789999999999999999999864321 10 1000
Q ss_pred cccccCCCCCeEEEEEec--C--CCCCCCCCHHHHHHHHHHHHhHhhcCCCCCcccc
Q 009646 370 IYDEHKDDSATVIQADFY--H--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMD 422 (530)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~eei~~~~l~~L~~~~p~~~~~~i~~ 422 (530)
.+ ...+.++ .|. + +..+..+++ +..+.++..|.+++|++.+.++..
T Consensus 69 -~~---~~pg~l~--~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~~~~~~~ 118 (130)
T 2e1m_B 69 -DA---IAPGLYD--YYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVDESRIGE 118 (130)
T ss_dssp -HH---HSTTHHH--HHHHHCCCSCCCC-----------------------------
T ss_pred -CC---CCCeEEE--EecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCcHHHHHH
Confidence 00 0112111 111 1 223455544 667789999999999775434443
No 235
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.15 E-value=0.0023 Score=60.57 Aligned_cols=34 Identities=32% Similarity=0.403 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4689999999999999999999999999998763
No 236
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.12 E-value=0.0027 Score=61.80 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|.+|+-.|..|++.|.+|+++++++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 3579999999999999999999999999999865
No 237
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.04 E-value=0.0085 Score=61.22 Aligned_cols=33 Identities=36% Similarity=0.522 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
..+|+|||||..|+-.|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 456999999999999999999999999999974
No 238
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.02 E-value=0.0046 Score=59.11 Aligned_cols=34 Identities=26% Similarity=0.475 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|..|+-.|..|++.|.+|+++++++
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4689999999999999999999999999999763
No 239
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.78 E-value=0.014 Score=60.90 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
..+|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999975
No 240
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.72 E-value=0.013 Score=55.49 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...+|+|||+|..|+-+|..|++.|.+|+++++++
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 34689999999999999999999999999999764
No 241
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.63 E-value=0.0023 Score=53.72 Aligned_cols=40 Identities=30% Similarity=0.396 Sum_probs=33.1
Q ss_pred CCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 41 NNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 41 ~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
|+......+|+|||+|..|...|..|.+.|++|+++++++
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4445566789999999999999999999999999999864
No 242
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.58 E-value=0.01 Score=56.53 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4679999999999999999999999999998764
No 243
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.23 E-value=0.0074 Score=49.54 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+.+|+|||.|-.|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34679999999999999999999999999999874
No 244
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.22 E-value=0.0054 Score=61.44 Aligned_cols=39 Identities=36% Similarity=0.492 Sum_probs=35.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG 84 (530)
...+|+|||||.+|+.+|..|++.|.+|+|+|+++++..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 186 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG 186 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc
Confidence 457899999999999999999999999999999987765
No 245
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.15 E-value=0.0047 Score=60.45 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=35.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++..+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 468999999999999999999999999999999877543
No 246
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.15 E-value=0.0059 Score=49.88 Aligned_cols=33 Identities=30% Similarity=0.540 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 689999999999999999999999999999853
No 247
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.01 E-value=0.0056 Score=57.99 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 358999999999999999999999999999998755
No 248
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.90 E-value=0.0082 Score=47.29 Aligned_cols=34 Identities=35% Similarity=0.412 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G-~~V~vlE~~~ 80 (530)
+++|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 357999999999999999999999 8999999863
No 249
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.88 E-value=0.013 Score=58.08 Aligned_cols=43 Identities=16% Similarity=0.301 Sum_probs=36.9
Q ss_pred ccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 39 STNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 39 ~~~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
|.+.++....+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 46 ~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 46 HTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp TTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5555555667899999999999999999999999999998753
No 250
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.82 E-value=0.011 Score=48.59 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+.+|+|+|+|-.|...|..|.++|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999863
No 251
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.80 E-value=0.0091 Score=60.10 Aligned_cols=58 Identities=21% Similarity=0.308 Sum_probs=43.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++....+..+ ...+.+.+++.|++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~gV~ 226 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPET---AALLRRALEKEGIR 226 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHH---HHHHHHHHHhcCCE
Confidence 46899999999999999999999999999999987654322100 11234556677776
No 252
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.80 E-value=0.011 Score=55.79 Aligned_cols=34 Identities=29% Similarity=0.541 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999863
No 253
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.74 E-value=0.01 Score=59.65 Aligned_cols=58 Identities=24% Similarity=0.337 Sum_probs=43.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||.+|+.+|..|++.|.+|+|+|+++++....+..+ ...+.+.+++.|++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~---~~~l~~~l~~~Gv~ 224 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEV---SRAAERVFKKQGLT 224 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHH---HHHHHHHHHHHTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHH---HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999887643221000 11244556677776
No 254
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.72 E-value=0.014 Score=48.63 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+.+|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999863
No 255
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.71 E-value=0.013 Score=57.42 Aligned_cols=39 Identities=23% Similarity=0.455 Sum_probs=35.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
..+|+|||+|..|+..|..|++.|.+|+|+|+.+++..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc
Confidence 568999999999999999999999999999998876543
No 256
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.64 E-value=0.01 Score=59.30 Aligned_cols=51 Identities=35% Similarity=0.264 Sum_probs=39.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..++|.|||.|.+|+++|..|.++|++|++.|++... .+...+.+++.|++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~-----------~~~~~~~L~~~gi~ 58 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD-----------ENPTAQSLLEEGIK 58 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG-----------GCHHHHHHHHTTCE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc-----------CChHHHHHHhCCCE
Confidence 4578999999999999999999999999999986421 12234566667765
No 257
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.49 E-value=0.017 Score=57.91 Aligned_cols=58 Identities=14% Similarity=0.233 Sum_probs=44.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+++++...++..+ ...+.+.+++.|++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~Gv~ 224 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMI---SETLVEVMNAEGPQ 224 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH---HHHHHHHHHHHSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHH---HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999887654333110 11244566777876
No 258
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.36 E-value=0.014 Score=55.19 Aligned_cols=35 Identities=37% Similarity=0.537 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 46899999999999999999999999999998653
No 259
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.20 E-value=0.022 Score=54.30 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=32.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
..+++|+|||+|-.|.+.|..|++.|+ +|+++|.+.
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 344689999999999999999999998 999999864
No 260
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.15 E-value=0.023 Score=57.57 Aligned_cols=59 Identities=24% Similarity=0.387 Sum_probs=43.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-cccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-DDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~-~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
...+|+|||||..|+-.|..|++.|.+|+|+|+.+++-.+ ++..+ ...+.+.+++.|++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~---~~~l~~~l~~~GV~ 252 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDL---TDLMAKNMEEHGIQ 252 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHH---HHHHHHHHHTTTCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHH---HHHHHHHHHhCCeE
Confidence 3568999999999999999999999999999999876542 22100 11234556666766
No 261
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.14 E-value=0.021 Score=57.36 Aligned_cols=58 Identities=22% Similarity=0.306 Sum_probs=43.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++...++... ...+.+.+++.|++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~gv~ 223 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLL---SATLAENMHAQGIE 223 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHH---HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999887654333110 11244566777776
No 262
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.05 E-value=0.031 Score=52.63 Aligned_cols=40 Identities=25% Similarity=0.255 Sum_probs=34.2
Q ss_pred CCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 41 NNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 41 ~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
|+.....++|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 m~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCCCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3334455789999999999999999999999999998863
No 263
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.05 E-value=0.027 Score=52.41 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3579999999999999999999999999999864
No 264
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.04 E-value=0.024 Score=46.39 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999975
No 265
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.00 E-value=0.024 Score=54.57 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=32.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+.+++|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34578999999999999999999999999999986
No 266
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.99 E-value=0.024 Score=53.31 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+|.|||+|..|...|..++.+|++|+|+|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999764
No 267
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.98 E-value=0.018 Score=58.26 Aligned_cols=59 Identities=20% Similarity=0.360 Sum_probs=44.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+++...++..+ ...+.+.+++.|++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~Gv~ 243 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDM---AEYIYKEADKHHIE 243 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHH---HHHHHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHH---HHHHHHHHHHcCcE
Confidence 457899999999999999999999999999999887765322100 11244556777776
No 268
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.93 E-value=0.026 Score=56.91 Aligned_cols=37 Identities=30% Similarity=0.440 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 214 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG 214 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC
Confidence 4689999999999999999999999999999987654
No 269
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.93 E-value=0.032 Score=55.44 Aligned_cols=58 Identities=26% Similarity=0.337 Sum_probs=43.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-cccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-DDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~-~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++..+ ++..+ ...+.+.+++.|++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~---~~~l~~~l~~~GV~ 207 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPV---SAFYEHLHREAGVD 207 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHH---HHHHHHHHHHHTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHH---HHHHHHHHHhCCeE
Confidence 468999999999999999999999999999998876543 11000 01234556677776
No 270
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.92 E-value=0.03 Score=52.75 Aligned_cols=35 Identities=31% Similarity=0.577 Sum_probs=31.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
+...+|.|||+|..|.+.|+.|+.+|+ +|+++|..
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 345689999999999999999999999 99999986
No 271
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.85 E-value=0.031 Score=52.80 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=33.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 44 ~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...+++|.|||.|..|...|..|+++|++|++++++.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3455789999999999999999999999999999864
No 272
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.84 E-value=0.031 Score=48.12 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~-G~~V~vlE~~~ 80 (530)
..+|+|||+|..|...|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 273
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.83 E-value=0.032 Score=55.03 Aligned_cols=58 Identities=26% Similarity=0.382 Sum_probs=42.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-cccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-DDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~-~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++-.+ ++.. -...+.+.+++.|++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~---~~~~l~~~l~~~GV~ 201 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRR---IGAWLRGLLTELGVQ 201 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHH---HHHHHHHHHHHHTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHH---HHHHHHHHHHHCCCE
Confidence 468999999999999999999999999999998876432 1100 011234556666765
No 274
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.82 E-value=0.029 Score=53.25 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999863
No 275
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.77 E-value=0.031 Score=52.59 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+++|.|||.|..|...|..|+++|++|+++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 44689999999999999999999999999999863
No 276
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.75 E-value=0.026 Score=52.85 Aligned_cols=42 Identities=31% Similarity=0.476 Sum_probs=31.0
Q ss_pred ccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009646 39 STNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (530)
Q Consensus 39 ~~~~~~~~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~~ 80 (530)
|+..+...+.+|+|||+|..|...|+.|+.+|+ +|.|+|.+.
T Consensus 6 ~~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 6 WANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp --------CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred cccccCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 334444555789999999999999999999998 999999865
No 277
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.74 E-value=0.022 Score=56.71 Aligned_cols=35 Identities=26% Similarity=0.459 Sum_probs=32.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
++|.|||.|.+|+++|..|+++|++|++.|.....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 57999999999999999999999999999987654
No 278
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.67 E-value=0.027 Score=50.06 Aligned_cols=33 Identities=12% Similarity=0.349 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|+|||+|-.|...|..|.++|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 279
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.65 E-value=0.038 Score=55.21 Aligned_cols=39 Identities=26% Similarity=0.504 Sum_probs=35.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+++...
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 358999999999999999999999999999999887654
No 280
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.64 E-value=0.035 Score=56.82 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..++|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999876
No 281
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.61 E-value=0.036 Score=55.21 Aligned_cols=58 Identities=22% Similarity=0.395 Sum_probs=45.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++....+... ...+.+.+++.|++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~---~~~~~~~l~~~gV~ 204 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADM---NQPILDELDKREIP 204 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGG---GHHHHHHHHHTTCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchh---HHHHHHHhhccceE
Confidence 45799999999999999999999999999999988765433111 12355667777876
No 282
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.54 E-value=0.023 Score=53.88 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=30.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHC-----C-CeEEEEcC
Q 009646 43 NGKNKKKIVVVGSGWAGLGAAHHLSKQ-----G-FDVTVLDD 78 (530)
Q Consensus 43 ~~~~~~dVvIIGaG~aGL~aA~~La~~-----G-~~V~vlE~ 78 (530)
|...+++|.|||+|..|...|..|+++ | ++|+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 334446899999999999999999999 9 99999986
No 283
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.52 E-value=0.034 Score=56.45 Aligned_cols=58 Identities=24% Similarity=0.314 Sum_probs=44.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++...++... ...+.+.+++.|++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~---~~~l~~~l~~~gv~ 233 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESV---INVLENDMKKNNIN 233 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhh---HHHHHHHHHhCCCE
Confidence 56899999999999999999999999999999888754333110 11244566777776
No 284
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.47 E-value=0.03 Score=52.90 Aligned_cols=33 Identities=33% Similarity=0.420 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999863
No 285
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.46 E-value=0.04 Score=51.88 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||+|..|+-.|..|++.|.+|+++++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 468999999999999999999999999999987654
No 286
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.43 E-value=0.04 Score=55.32 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34789999999999999999999999999999863
No 287
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.38 E-value=0.041 Score=51.99 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 288
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.36 E-value=0.044 Score=55.08 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=42.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++-. ++..+ ...+.+.+++.|++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~---~~~l~~~l~~~Gv~ 232 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAI---GEAVTAAFRAEGIE 232 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHH---HHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHH---HHHHHHHHHhCCCE
Confidence 46899999999999999999999999999999887643 22100 11244566677776
No 289
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.35 E-value=0.048 Score=51.82 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
++|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999864
No 290
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.29 E-value=0.045 Score=51.90 Aligned_cols=33 Identities=24% Similarity=0.438 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
+++|+|||+|..|...|..|++.|+ +|++++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999998 99999986
No 291
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.29 E-value=0.042 Score=48.70 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
....|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999864
No 292
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.29 E-value=0.044 Score=51.78 Aligned_cols=32 Identities=34% Similarity=0.449 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 58999999999999999999999999999875
No 293
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.29 E-value=0.047 Score=51.58 Aligned_cols=36 Identities=22% Similarity=0.504 Sum_probs=30.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~~ 80 (530)
+.+++|+|||+|-.|.+.|+.|+..|. +|.++|.+.
T Consensus 5 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 5 KSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 345789999999999999999999987 899999753
No 294
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.28 E-value=0.046 Score=54.96 Aligned_cols=37 Identities=30% Similarity=0.436 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 210 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA 210 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc
Confidence 4689999999999999999999999999999987653
No 295
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.27 E-value=0.055 Score=47.69 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..++|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999998764
No 296
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.24 E-value=0.046 Score=52.23 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.++|.|||+|..|...|..|+++|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999874
No 297
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.19 E-value=0.043 Score=54.87 Aligned_cols=58 Identities=24% Similarity=0.360 Sum_probs=43.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-cccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-DDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~-~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++-.+ ++..+ ...+.+.+++.|++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~---~~~l~~~l~~~Gv~ 207 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEF---TDILAKDYEAHGVN 207 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhH---HHHHHHHHHHCCCE
Confidence 468999999999999999999999999999998876542 22110 11244566777876
No 298
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.16 E-value=0.056 Score=53.15 Aligned_cols=58 Identities=24% Similarity=0.346 Sum_probs=42.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCc-ccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-DISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~-~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++..+. +..+ ...+.+.+++.|++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~---~~~l~~~l~~~GV~ 200 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEI---SSYFHDRHSGAGIR 200 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHH---HHHHHHHHHhCCcE
Confidence 4679999999999999999999999999999988765431 1000 11244556666776
No 299
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.14 E-value=0.051 Score=50.59 Aligned_cols=33 Identities=33% Similarity=0.247 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 369999999999999999999999999999864
No 300
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.14 E-value=0.056 Score=52.38 Aligned_cols=34 Identities=35% Similarity=0.397 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 301
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.12 E-value=0.049 Score=51.75 Aligned_cols=48 Identities=27% Similarity=0.341 Sum_probs=38.0
Q ss_pred CCcEEEECCCHHHHH-HHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLG-AAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~-aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
+++|.|||.|.+|++ +|..|.++|++|++.|+.... ...+.+++.|++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~-------------~~~~~L~~~gi~ 52 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP-------------PMSTQLEALGID 52 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT-------------THHHHHHHTTCE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc-------------HHHHHHHhCCCE
Confidence 468999999999997 788899999999999987532 234556666765
No 302
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.08 E-value=0.05 Score=54.10 Aligned_cols=33 Identities=33% Similarity=0.550 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999864
No 303
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.06 E-value=0.061 Score=52.91 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+.+|.|||.|..||..|..|+++|++|+.+|-+.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 356789999999999999999999999999999764
No 304
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.06 E-value=0.062 Score=53.04 Aligned_cols=58 Identities=28% Similarity=0.307 Sum_probs=43.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCc-ccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-DISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~-~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+. +... ...+.+.+++.|++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~---~~~l~~~l~~~GV~ 210 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEAL---SEFYQAEHRAHGVD 210 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHH---HHHHHHHHHhCCCE
Confidence 5689999999999999999999999999999998775431 1000 11234556667776
No 305
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.04 E-value=0.053 Score=52.31 Aligned_cols=33 Identities=30% Similarity=0.303 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+++|.|||+|..|...|..|+++|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 368999999999999999999999999999875
No 306
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=94.03 E-value=0.073 Score=53.43 Aligned_cols=38 Identities=18% Similarity=0.342 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
...+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 208 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL 208 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC
Confidence 34689999999999999999999999999999987653
No 307
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.98 E-value=0.038 Score=51.70 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
++|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 68999999999999999999999999999986
No 308
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.97 E-value=0.035 Score=50.87 Aligned_cols=33 Identities=27% Similarity=0.493 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+.|+|||||-.|+..|..|.+.|++|+|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 468999999999999999999999999999865
No 309
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.96 E-value=0.051 Score=54.21 Aligned_cols=36 Identities=31% Similarity=0.413 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CC-eEEEEcCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQ-GF-DVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~-G~-~V~vlE~~~~ 81 (530)
..++|.|||+|..|+..|..|+++ |+ +|+++|++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998865
No 310
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.95 E-value=0.067 Score=53.52 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..++|.|||+|..|...|..|+++|++|+++|+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34579999999999999999999999999999864
No 311
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.92 E-value=0.056 Score=55.81 Aligned_cols=58 Identities=22% Similarity=0.366 Sum_probs=43.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-+|..|++.|.+|+++|+.+++...++..+ ...+.+.+++.|++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~GV~ 208 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREM---AGFAHQAIRDQGVD 208 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHH---HHHHHHHHHHCCCE
Confidence 45899999999999999999999999999999887654322110 11234556677776
No 312
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.90 E-value=0.055 Score=55.50 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..++|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 456899999999999999999999999999999876
No 313
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.90 E-value=0.059 Score=50.97 Aligned_cols=34 Identities=35% Similarity=0.528 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
+++|+|||+|..|...|..|+++|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999999998 999999864
No 314
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.89 E-value=0.061 Score=54.22 Aligned_cols=58 Identities=19% Similarity=0.234 Sum_probs=43.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++.|.+|+|+++.+++...++..+ ...+.+.+++.|++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~---~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI---STNCTEELENAGVE 244 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHH---HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999887654332111 11244566777776
No 315
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.87 E-value=0.05 Score=54.62 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
...+|+|||+|.+|+-.|..|++.|.+|+|+++++.+-
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 34689999999999999999999999999999887653
No 316
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.85 E-value=0.037 Score=49.31 Aligned_cols=35 Identities=14% Similarity=0.288 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEE-EcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTV-LDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~v-lE~~~ 80 (530)
.+++|.|||+|..|.+.|..|+++|++|++ ++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 346899999999999999999999999999 87753
No 317
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.85 E-value=0.063 Score=51.60 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=31.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+++|.|||.|..|...|..|+++|++|++++++.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 345789999999999999999999999999999863
No 318
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.82 E-value=0.075 Score=50.25 Aligned_cols=35 Identities=37% Similarity=0.485 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..++|.|||+|..|...|..|++.|++|++++++.
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999998763
No 319
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.81 E-value=0.074 Score=50.33 Aligned_cols=34 Identities=38% Similarity=0.473 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
.++|+|||+|-.|...|..|+..|+ +|.++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999999998 999999763
No 320
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.78 E-value=0.056 Score=51.56 Aligned_cols=36 Identities=25% Similarity=0.441 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||+|..|+-.|..|++.|.+|+++++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 468999999999999999999999999999987643
No 321
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.76 E-value=0.072 Score=54.36 Aligned_cols=59 Identities=25% Similarity=0.332 Sum_probs=42.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+.+++|||||..|+--|..+++.|.+|+|++++..+.+. |.-. ...+.+.+++.|+.
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~-D~ei---~~~l~~~l~~~gi~ 279 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGF-DQQC---AVKVKLYMEEQGVM 279 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTS-CHHH---HHHHHHHHHHTTCE
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccccc-chhH---HHHHHHHHHhhcce
Confidence 34578999999999999999999999999999987655331 2000 11244556666775
No 322
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.76 E-value=0.055 Score=51.95 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 323
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.73 E-value=0.06 Score=52.90 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=31.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...++|.|||.|..|+..|..|++ |++|+++|+++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345789999999999999999998 99999999864
No 324
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.70 E-value=0.071 Score=53.30 Aligned_cols=58 Identities=17% Similarity=0.241 Sum_probs=42.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-cccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-DDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~-~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+++|||+|..|+-.|..|++.|.+|+++|+.+++..+ ++..+ ...+.+.+++.|++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~---~~~l~~~l~~~GV~ 205 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEM---VAEVQKSLEKQAVI 205 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHH---HHHHHHHHHTTTEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHH---HHHHHHHHHHcCCE
Confidence 467999999999999999999999999999999876543 22110 11234555666665
No 325
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.69 E-value=0.059 Score=51.09 Aligned_cols=36 Identities=33% Similarity=0.453 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||+|.+|+-.|..|++.|.+|+++++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTL 187 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcC
Confidence 368999999999999999999999999999987644
No 326
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.69 E-value=0.068 Score=53.61 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999864
No 327
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.59 E-value=0.07 Score=50.19 Aligned_cols=32 Identities=41% Similarity=0.405 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|.+.|..|+ +|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999863
No 328
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.56 E-value=0.079 Score=47.98 Aligned_cols=36 Identities=31% Similarity=0.355 Sum_probs=31.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...++|.|||+|..|.+.|..|+++|++|++++++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 455789999999999999999999999999999863
No 329
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.55 E-value=0.065 Score=51.32 Aligned_cols=36 Identities=39% Similarity=0.469 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
-.+.+|+|+|||.+|..+|..|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 345789999999999999999999998 999999874
No 330
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.53 E-value=0.062 Score=53.62 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCe-EEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFD-VTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~-V~vlE~~~~~ 82 (530)
..+|+|||+|.+|+-.|..|++.|.+ |+|+++++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 46899999999999999999999999 9999997654
No 331
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.51 E-value=0.077 Score=49.29 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.++|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 478999999999999999999 999999999864
No 332
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.50 E-value=0.061 Score=54.08 Aligned_cols=34 Identities=29% Similarity=0.480 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~~ 80 (530)
+++|.|||.|..|+..|..|+++ |++|++++++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 79999999753
No 333
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.48 E-value=0.05 Score=50.91 Aligned_cols=34 Identities=26% Similarity=0.190 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+++|.|||.|..|...|..|+++|++|+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 334
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.47 E-value=0.065 Score=54.27 Aligned_cols=58 Identities=19% Similarity=0.208 Sum_probs=43.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ---GFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~---G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++. |.+|+|+|+.+++-..++..+ ...+.+.+++.|++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~---~~~l~~~l~~~GV~ 251 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETI---REEVTKQLTANGIE 251 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHH---HHHHHHHHHhCCCE
Confidence 46899999999999999999999 999999999887654333110 12244566777876
No 335
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.39 E-value=0.075 Score=50.33 Aligned_cols=35 Identities=29% Similarity=0.510 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..++|.|||.|..|...|..|+++|++|++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 44689999999999999999999999999999863
No 336
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.36 E-value=0.1 Score=52.57 Aligned_cols=59 Identities=25% Similarity=0.354 Sum_probs=43.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
...+|+|||+|..|+-.|..|++.|.+|+++|+.+++...++..+ ...+.+.+++.|++
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~Gv~ 237 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQV---AKEAQKILTKQGLK 237 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHH---HHHHHHHHHHTTEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHH---HHHHHHHHHhCCCE
Confidence 346899999999999999999999999999999887654322100 11234556666765
No 337
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.31 E-value=0.072 Score=53.88 Aligned_cols=58 Identities=19% Similarity=0.229 Sum_probs=43.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ---GFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~---G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+++|||||..|+-.|..|++. |.+|+|+|+.+++...++..+ ...+.+.+++.|++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~---~~~l~~~l~~~GV~ 247 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSEL---RKQLTEQLRANGIN 247 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHH---HHHHHHHHHHTTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHH---HHHHHHHHHhCCCE
Confidence 46899999999999999999999 999999999987654332100 11244556667766
No 338
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.27 E-value=0.085 Score=49.91 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=29.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+++|.|||+|..|...|..|+++|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4578999999999999999999999999999 64
No 339
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.24 E-value=0.089 Score=53.70 Aligned_cols=58 Identities=16% Similarity=0.170 Sum_probs=43.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIKP 108 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~~ 108 (530)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++...++..+ ...+.+.+++.|++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~GV~i 272 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNET---RAYVLDRMKEQGMEI 272 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHH---HHHHHHHHHHTTCEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHH---HHHHHHHHHhCCcEE
Confidence 7899999999999999999999999999999887654322110 122445667777763
No 340
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.21 E-value=0.079 Score=50.68 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=31.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
-.+.+|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 345789999999999999999999998 89999987
No 341
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.20 E-value=0.078 Score=50.39 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 467999999999999999999999999999987654
No 342
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.19 E-value=0.095 Score=46.37 Aligned_cols=33 Identities=30% Similarity=0.347 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.++|.|||+|..|...|..|++.|++|++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999999876
No 343
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.18 E-value=0.11 Score=53.81 Aligned_cols=58 Identities=19% Similarity=0.414 Sum_probs=43.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||||..|+-.|..|++.|.+|+++|+.+++...++..+ ...+.+.+++.|++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~---~~~l~~~l~~~GV~ 244 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEM---AAYVHEHMKNHDVE 244 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHH---HHHHHHHHHHcCCE
Confidence 46899999999999999999999999999999887654432111 12244566777776
No 344
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.14 E-value=0.094 Score=49.20 Aligned_cols=32 Identities=34% Similarity=0.552 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
++|+|||+|..|.+.|..|+.+|+ +|+++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999999998 99999986
No 345
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.09 E-value=0.094 Score=48.77 Aligned_cols=33 Identities=30% Similarity=0.453 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 346
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.04 E-value=0.042 Score=54.87 Aligned_cols=34 Identities=29% Similarity=0.499 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.|+|+|+|+|-.|...|..|.+.|++|+|+|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4789999999999999999999999999999874
No 347
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.03 E-value=0.11 Score=51.80 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGF 82 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~~~ 82 (530)
...+|+|||||.+|+-+|..+.+.|. +|+++++.+..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 34689999999999999999999998 59999987643
No 348
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.02 E-value=0.062 Score=52.05 Aligned_cols=31 Identities=42% Similarity=0.370 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 49 dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+|.|||+|..|...|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 349
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.01 E-value=0.1 Score=49.33 Aligned_cols=34 Identities=29% Similarity=0.589 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
..++|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 45689999999999999999999987 89999975
No 350
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.99 E-value=0.1 Score=49.79 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+++|.|||+|..|...|..|+++|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 478999999999999999999999999999875
No 351
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.99 E-value=0.078 Score=52.67 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 369999999999999999999999999999863
No 352
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.93 E-value=0.11 Score=52.76 Aligned_cols=58 Identities=22% Similarity=0.280 Sum_probs=44.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+++...++... ...+.+.+++.|++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~---~~~l~~~l~~~GV~ 239 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADA---ALVLEESFAERGVR 239 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHH---HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999987754433110 12244566777876
No 353
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.86 E-value=0.1 Score=49.42 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=31.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC----CeEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQG----FDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G----~~V~vlE~~~ 80 (530)
+.+++|.|||+|..|.+.|..|.++| ++|++++++.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 34468999999999999999999999 8999998864
No 354
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.85 E-value=0.13 Score=49.00 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...+|.|||.|..|-+-|..|.++|++|+++++++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44679999999999999999999999999999863
No 355
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.76 E-value=0.15 Score=47.64 Aligned_cols=34 Identities=35% Similarity=0.497 Sum_probs=31.0
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVG-SGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIG-aG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35799999 99999999999999999999998764
No 356
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.70 E-value=0.088 Score=53.66 Aligned_cols=36 Identities=31% Similarity=0.388 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||||.+|+-+|..|++.|.+|+++++.+.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 468999999999999999999999999999987654
No 357
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.62 E-value=0.12 Score=50.48 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4679999999999999999999999999999864
No 358
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.59 E-value=0.044 Score=48.78 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
..++|.|||.|..|.+-|..|+++|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4468999999999999999999999999999874
No 359
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.58 E-value=0.14 Score=50.68 Aligned_cols=35 Identities=26% Similarity=0.535 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
...+.|||.|..|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36799999999999999999999999999998764
No 360
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.55 E-value=0.15 Score=47.25 Aligned_cols=33 Identities=12% Similarity=0.356 Sum_probs=30.7
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+++|.|||+ |..|...|..|+++|++|++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 368999999 999999999999999999999875
No 361
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.49 E-value=0.12 Score=50.61 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+.+|+|||.|-.|...|..|.+.|++|+++|+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4579999999999999999999999999999874
No 362
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.48 E-value=0.15 Score=48.10 Aligned_cols=34 Identities=32% Similarity=0.488 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
.++|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999998 999999764
No 363
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.45 E-value=0.11 Score=49.05 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
.+++|.|||.|..|...|..|+++|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35789999999999999999999999 99999985
No 364
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.43 E-value=0.14 Score=48.23 Aligned_cols=33 Identities=30% Similarity=0.463 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~~ 80 (530)
++|+|||+|..|.+.|..|+++ |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999996 78999999864
No 365
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.42 E-value=0.13 Score=51.80 Aligned_cols=58 Identities=24% Similarity=0.313 Sum_probs=43.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCCCCCC-CcccccccccccHHHHHHHhCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGNGFGS-PDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~-G~~V~vlE~~~~~GG-~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
..+|+|||+|..|+-.|..|++. |.+|+++|+.+++.. .++..+ ...+.+.+++.|++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~---~~~l~~~l~~~GV~ 218 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSL---SQMLRHDLEKNDVV 218 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHH---HHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHH---HHHHHHHHHhcCCE
Confidence 46899999999999999999999 999999999887654 222100 12244566777776
No 366
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.41 E-value=0.087 Score=49.01 Aligned_cols=33 Identities=33% Similarity=0.437 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||.|..|...|..|+++|++|+++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 367
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.31 E-value=0.18 Score=47.45 Aligned_cols=34 Identities=26% Similarity=0.487 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~~ 80 (530)
.++|.|||.|..|.+.|..|.++|+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999999863
No 368
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.29 E-value=0.16 Score=46.73 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+.|+|+|+|-.|..+|..|++.|.+|+|+.++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 457999999999999999999999999999875
No 369
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.26 E-value=0.16 Score=47.79 Aligned_cols=33 Identities=36% Similarity=0.654 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
++|+|||+|-.|...|+.|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999753
No 370
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.24 E-value=0.058 Score=44.24 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
..+|+|||+|..|...|..|.+.|++|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 468999999999999999999999999999986
No 371
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.24 E-value=0.16 Score=49.43 Aligned_cols=35 Identities=29% Similarity=0.333 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 372
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.23 E-value=0.12 Score=48.39 Aligned_cols=34 Identities=32% Similarity=0.442 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+++|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3689999999999999999999999999998863
No 373
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.23 E-value=0.11 Score=49.40 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD 78 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~ 78 (530)
++|.|||+|..|...|..|+++|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999987
No 374
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.19 E-value=0.18 Score=47.55 Aligned_cols=34 Identities=35% Similarity=0.449 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
.++|.|||+|..|.+.|+.|+..|. +|.++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999988 999999764
No 375
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.15 E-value=0.18 Score=46.06 Aligned_cols=34 Identities=29% Similarity=0.508 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|-+|-++|+.|++.|.+|+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999998864
No 376
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.14 E-value=0.13 Score=46.55 Aligned_cols=32 Identities=31% Similarity=0.547 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
.+|+|||+|-.|..+|..|++.|. +|+|+|..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 579999999999999999999997 89999975
No 377
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.14 E-value=0.16 Score=51.26 Aligned_cols=59 Identities=25% Similarity=0.314 Sum_probs=44.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
...+|+|||+|..|+-.|..|++.|.+|+++|+.+++...++..+ ...+.+.+++.|++
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~---~~~l~~~l~~~Gv~ 248 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDL---RQLLNDAMVAKGIS 248 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH---HHHHHHHHHHHTCE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHH---HHHHHHHHHHCCCE
Confidence 356899999999999999999999999999999887654332110 11244566777876
No 378
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.13 E-value=0.16 Score=50.88 Aligned_cols=60 Identities=22% Similarity=0.337 Sum_probs=44.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIKP 108 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~~ 108 (530)
...+++|||+|..|+-.|..|++.|.+|+++|+.+++...++..+ ...+.+.+++.|++.
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~---~~~l~~~l~~~Gv~i 228 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDM---RRGLHAAMEEKGIRI 228 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHH---HHHHHHHHHHCCCEE
Confidence 356899999999999999999999999999999887653322110 122445667778763
No 379
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.10 E-value=0.15 Score=47.70 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 468999999999999999999999999999987644
No 380
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.00 E-value=0.15 Score=44.81 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=29.3
Q ss_pred cEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 49 KIVVVG-SGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 49 dVvIIG-aG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+|.||| +|..|...|..|+++|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 9999999999999999999999875
No 381
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.97 E-value=0.11 Score=50.80 Aligned_cols=32 Identities=41% Similarity=0.465 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 369999999999999999999 99999999863
No 382
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.93 E-value=0.17 Score=48.84 Aligned_cols=35 Identities=31% Similarity=0.430 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
+++|+|||||..|..+|+.+.+.|++|+++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 36799999999999999999999999999998654
No 383
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.89 E-value=0.18 Score=48.65 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+|+|+|+|.+|+.++..|...|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999863
No 384
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.86 E-value=0.16 Score=53.69 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.++|.|||+|..|...|..|+++|++|+++|+++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999864
No 385
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.86 E-value=0.13 Score=51.59 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~~ 80 (530)
++|.|||.|..|+..|..|+++ |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999999 89999999863
No 386
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.70 E-value=0.2 Score=50.47 Aligned_cols=58 Identities=28% Similarity=0.364 Sum_probs=40.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIK 107 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~ 107 (530)
...+++|||||..|+-.|..|++.|.+|+|+++...+. .++... ...+.+.+++.|++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~-~~d~~~---~~~l~~~l~~~Gv~ 243 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR-GFDQQM---AELVAASMEERGIP 243 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST-TSCHHH---HHHHHHHHHHTTCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc-ccCHHH---HHHHHHHHHhCCCE
Confidence 34679999999999999999999999999999853222 111000 11244556777776
No 387
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.68 E-value=0.15 Score=48.18 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G-~~V~vlE~~~ 80 (530)
+++|.|||.|..|...|..|+++| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999864
No 388
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.66 E-value=0.19 Score=50.21 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+++|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 389
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.61 E-value=0.16 Score=48.08 Aligned_cols=32 Identities=34% Similarity=0.542 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
++|+|||+|..|.+.|..|++.|+ +|+++|++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 379999999999999999999999 99999976
No 390
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.57 E-value=0.16 Score=47.74 Aligned_cols=32 Identities=38% Similarity=0.535 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G--~~V~vlE~~ 79 (530)
++|+|||+|..|.+.|..|+++| .+|+++|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 57999999999999999999999 799999985
No 391
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.52 E-value=0.17 Score=50.51 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHH--------------------HCCC-eEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLS--------------------KQGF-DVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La--------------------~~G~-~V~vlE~~~~~ 82 (530)
..+|+|||+|..|+-+|..|+ +.|. +|+|+++.+.+
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 468999999999999999999 5687 79999987644
No 392
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.44 E-value=0.21 Score=48.30 Aligned_cols=34 Identities=32% Similarity=0.450 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...|+|+|+|..|+.+|..|+..|++|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3679999999999999999999999999999763
No 393
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.36 E-value=0.23 Score=45.98 Aligned_cols=34 Identities=38% Similarity=0.515 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+++|+|.|+|..|...+..|.++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999999999999998864
No 394
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.33 E-value=0.2 Score=45.80 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQG----FDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G----~~V~vlE~~~ 80 (530)
+++|.|||+|..|.+-|..|+++| ++|++++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 358999999999999999999999 7999999864
No 395
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.25 E-value=0.32 Score=45.77 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
...+|.|||+|..|.+.|+.|+.+|. +|.++|.+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 44789999999999999999999997 89999975
No 396
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.24 E-value=0.18 Score=47.15 Aligned_cols=33 Identities=33% Similarity=0.303 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 368999999999999999999999999999875
No 397
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.19 E-value=0.22 Score=44.55 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=31.2
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+.|+|.|| |..|...|..|.++|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4568999998 9999999999999999999998863
No 398
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.16 E-value=0.23 Score=45.82 Aligned_cols=32 Identities=31% Similarity=0.371 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
++|.|||+|..|.+.|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999875
No 399
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.11 E-value=0.18 Score=46.49 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+.|+|+|+|-+|.++|+.|++.|.+|+|+.++
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 457999999999999999999999999999886
No 400
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.10 E-value=0.13 Score=49.56 Aligned_cols=35 Identities=29% Similarity=0.260 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-------CeEEEEcCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQG-------FDVTVLDDGNG 81 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G-------~~V~vlE~~~~ 81 (530)
+++|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 89999998754
No 401
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.10 E-value=0.17 Score=46.32 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCe-EEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFD-VTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~-V~vlE~~~ 80 (530)
+++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 36899999999999999999999998 89998753
No 402
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.09 E-value=0.19 Score=46.62 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~~ 80 (530)
++|+|||+|..|.+.|+.|++.|+ +|+++|...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999998 999999753
No 403
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.08 E-value=0.17 Score=46.77 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+++|+|+|||..|...+..|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999998864
No 404
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.00 E-value=0.21 Score=46.89 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~~ 80 (530)
++|+|||+|..|.+.|+.|++.|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999987 899999864
No 405
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.98 E-value=0.24 Score=46.22 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
..+|+|||+|-+|..+|..|++.|. +|+|+.++
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4679999999999999999999998 99999876
No 406
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.95 E-value=0.2 Score=49.92 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+.|+|||+|-.|...|..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 367999999999999999999999999999974
No 407
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.90 E-value=0.21 Score=45.64 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G-~~V~vlE~~ 79 (530)
++|.|||+|..|...|..|++.| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999875
No 408
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=90.89 E-value=0.59 Score=47.65 Aligned_cols=41 Identities=24% Similarity=0.411 Sum_probs=37.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~ 85 (530)
..++||+|||||++||+||+.|++.|++|+|+|+++.++++
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R 145 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRER 145 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCccccc
Confidence 34589999999999999999999999999999999887765
No 409
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.85 E-value=0.22 Score=52.67 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..++|.|||+|..|...|..|+++|++|+++|+++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 34579999999999999999999999999999864
No 410
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.81 E-value=0.28 Score=43.20 Aligned_cols=33 Identities=27% Similarity=0.427 Sum_probs=29.9
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999996 9999999999999999999998863
No 411
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.79 E-value=0.19 Score=48.34 Aligned_cols=41 Identities=29% Similarity=0.499 Sum_probs=35.5
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC---eEEEEcCCC-CCCCCc
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGF---DVTVLDDGN-GFGSPD 86 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~---~V~vlE~~~-~~GG~~ 86 (530)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~ 258 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPF 258 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCch
Confidence 4578999999 9999999999999998 999999865 457763
No 412
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.75 E-value=0.26 Score=46.28 Aligned_cols=36 Identities=39% Similarity=0.502 Sum_probs=31.9
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
.++.|+|.|| |..|...+..|.++|++|+++.++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999998654
No 413
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.73 E-value=0.28 Score=45.30 Aligned_cols=32 Identities=28% Similarity=0.541 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
++|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 99999875
No 414
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.72 E-value=0.32 Score=45.99 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
...+|+|||+|..|.+.|+.|+.+|. ++.++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 45789999999999999999999987 89999975
No 415
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.68 E-value=0.18 Score=48.84 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-------CeEEEEcCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQG-------FDVTVLDDGNG 81 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G-------~~V~vlE~~~~ 81 (530)
++|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999999 99999998654
No 416
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.67 E-value=0.17 Score=46.91 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+|+|||+|.+|+-.|..|++.| +|+++++++
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 468999999999999999999999 999998764
No 417
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.63 E-value=0.28 Score=47.53 Aligned_cols=35 Identities=40% Similarity=0.482 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
....|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34679999999999999999999999999999763
No 418
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.60 E-value=0.33 Score=51.22 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..-.+|.|||+|..|-..|+.++.+|++|+++|.++
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 345689999999999999999999999999999764
No 419
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.48 E-value=0.23 Score=49.73 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+++|.|||.|..|..-|..|+++|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999998863
No 420
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.41 E-value=0.24 Score=46.17 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 49 dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998763
No 421
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.31 E-value=0.36 Score=44.95 Aligned_cols=37 Identities=24% Similarity=0.228 Sum_probs=30.8
Q ss_pred CCCCCcEEEECCC---HHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 44 GKNKKKIVVVGSG---WAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 44 ~~~~~dVvIIGaG---~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
....+.|+|.||+ -.|...|..|+++|++|+++.++.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3345678999985 679999999999999999998763
No 422
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.30 E-value=0.31 Score=43.00 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=29.6
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
++|+|+|| |..|...+..|.++|++|+++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999998 999999999999999999999876
No 423
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.30 E-value=0.34 Score=44.72 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---eEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF---DVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~---~V~vlE~~~ 80 (530)
+++|.|||+|..|.+.|..|.++|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3679999999999999999999998 999999864
No 424
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.29 E-value=0.24 Score=43.88 Aligned_cols=34 Identities=32% Similarity=0.558 Sum_probs=30.8
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 368999995 9999999999999999999999864
No 425
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.24 E-value=0.3 Score=49.04 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999863
No 426
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.23 E-value=0.11 Score=46.60 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=29.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+.+|+|+|+|-.|...|..|.+.|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 34689999999999999999999999 99999864
No 427
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.20 E-value=0.36 Score=41.82 Aligned_cols=33 Identities=36% Similarity=0.605 Sum_probs=30.5
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+.|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999998864
No 428
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.18 E-value=0.3 Score=46.04 Aligned_cols=34 Identities=26% Similarity=0.487 Sum_probs=30.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
.+++|+|||+|-.|.+.|+.|+.+|. +|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999885 89999865
No 429
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.16 E-value=0.32 Score=45.81 Aligned_cols=34 Identities=26% Similarity=0.631 Sum_probs=30.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
..++|+|||+|..|.+.|+.|+.+|. +|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999998875 89999975
No 430
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.15 E-value=0.25 Score=46.13 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=30.0
Q ss_pred CCCcEEEECCC-HHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSG-WAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG-~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
...+|+|||+| +.|..+|..|...|.+|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 45789999999 67999999999999999998764
No 431
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.14 E-value=0.47 Score=45.95 Aligned_cols=38 Identities=32% Similarity=0.389 Sum_probs=33.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 44 ~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
....+.|.|||+|-.|...|..+.+.|++|.+++..+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 34557899999999999999999999999999997654
No 432
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=90.10 E-value=0.36 Score=45.82 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=30.0
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
..++|+|||+ |..|.++|+.|+..|. +|.++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 3468999997 9999999999999985 89999974
No 433
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.10 E-value=0.36 Score=43.64 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC----eEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF----DVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~----~V~vlE~~~ 80 (530)
++|.|||+|..|...|..|.++|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999863
No 434
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.09 E-value=0.17 Score=49.62 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=28.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CCCeEEEEcC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSK-QGFDVTVLDD 78 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~-~G~~V~vlE~ 78 (530)
++|.|||+|..|.+.|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 589999999999999999998 4999999983
No 435
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.09 E-value=0.31 Score=45.90 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
..++|+|||+|..|.+.|+.|+..|. ++.++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34689999999999999999999987 89999974
No 436
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.06 E-value=0.26 Score=45.95 Aligned_cols=32 Identities=28% Similarity=0.454 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
++|.|||+|..|...|..|++.|++|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999875
No 437
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.99 E-value=0.28 Score=45.19 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.++|+|||+|..|-+.|..|.+.|.+|++++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 367999999999999999999999999999876
No 438
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.97 E-value=0.23 Score=46.02 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=29.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|...|..|++ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999998763
No 439
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=89.89 E-value=0.44 Score=45.48 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=29.9
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..+.|+|.|| |-.|...|.+|+++|++|+++.++..
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~ 80 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChh
Confidence 3456888886 56789999999999999999988754
No 440
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.88 E-value=0.28 Score=45.07 Aligned_cols=34 Identities=29% Similarity=0.310 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
..+|+|||+|-+|-++|+.|++.|. +|+|+.|+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4679999999999999999999998 899998864
No 441
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=89.87 E-value=0.28 Score=52.23 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=32.7
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 47 KKKIVVVG--SGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 47 ~~dVvIIG--aG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
..+|+||| ||..|+-+|..|++.|.+|+|+++.+ +.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~ 565 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LA 565 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TT
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cc
Confidence 46899999 99999999999999999999999987 53
No 442
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.82 E-value=0.37 Score=45.03 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
...+|.|||+|-.|..+|..|...|++|++++++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 4468999999999999999999999999999976
No 443
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.81 E-value=0.26 Score=48.36 Aligned_cols=33 Identities=36% Similarity=0.566 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+..|||.|..|+..|..|+++|++|+++|.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 468899999999999999999999999999874
No 444
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.80 E-value=0.41 Score=43.84 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=30.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
....++|+|+|-+|-++|+.|++.|. +|+|+.|+
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34689999999999999999999996 99999875
No 445
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.79 E-value=0.32 Score=48.77 Aligned_cols=32 Identities=31% Similarity=0.529 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999875
No 446
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.76 E-value=0.4 Score=44.21 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=30.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
....|+|+|+|-+|-++|+.|++.|. +|+|+.|+
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 34689999999999999999999998 79999875
No 447
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.74 E-value=0.38 Score=45.05 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
....|+|+|+|-+|-++|+.|++.|. +|+|+.|+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 34689999999999999999999998 89999886
No 448
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.71 E-value=0.36 Score=48.55 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+|.|||.|..|...|..|+++|++|++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 449
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.70 E-value=0.29 Score=44.58 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
++|.|||+|..|...|..|.+.|++|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 58999999999999999999999999999875
No 450
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=89.69 E-value=0.73 Score=47.15 Aligned_cols=38 Identities=32% Similarity=0.450 Sum_probs=34.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 45 ~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
...+|+||||||.+|+++|.+|+++|++|+|||++...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35689999999999999999999999999999998754
No 451
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.65 E-value=0.28 Score=46.76 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=29.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
...+|+|||+|.+|+-+|..|++.| +|+++++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3468999999999999999999998 79999876
No 452
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.59 E-value=0.4 Score=45.21 Aligned_cols=33 Identities=27% Similarity=0.522 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
..+|+|||+|-.|..+|..|+..|. +++|+|..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4689999999999999999999997 89999964
No 453
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.54 E-value=0.21 Score=46.46 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 53
No 454
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.47 E-value=0.41 Score=44.56 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
...+|.|||.|-.|..+|..|...|.+|++++++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3468999999999999999999999999999976
No 455
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.43 E-value=0.41 Score=47.45 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..+.|+|+|+|-.|..+|..|+..|.+|++.|.++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 44679999999999999999999999999998753
No 456
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.42 E-value=0.39 Score=43.52 Aligned_cols=32 Identities=31% Similarity=0.388 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 49 KIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 49 dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
+|+|||+|-+|-++++.|.+.|. +|+|+.|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899998863
No 457
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.40 E-value=0.51 Score=41.58 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=29.2
Q ss_pred CcEEEECC-CHHHHHHHHHHH-HCCCeEEEEcCCC
Q 009646 48 KKIVVVGS-GWAGLGAAHHLS-KQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGa-G~aGL~aA~~La-~~G~~V~vlE~~~ 80 (530)
+.|+|+|| |..|...|..|+ ++|++|+++.++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 34999995 999999999999 8999999998863
No 458
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.36 E-value=0.28 Score=45.78 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=28.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
.+|.+||-|..|..-|..|.++|++|++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999865
No 459
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.29 E-value=0.37 Score=44.35 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
...+|+|||+|-+|-++|+.|.+.|. +|+|+.|.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34689999999999999999999998 89999876
No 460
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.25 E-value=0.35 Score=44.18 Aligned_cols=30 Identities=20% Similarity=0.292 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEcC
Q 009646 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDD 78 (530)
Q Consensus 49 dVvIIGaG~aGL~aA~~La~~G~~V~vlE~ 78 (530)
+|.|||+|..|...|..|++.|++|++.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999765
No 461
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.24 E-value=0.24 Score=44.40 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=30.7
Q ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCC-CeEEEEcCCC
Q 009646 45 KNKKKIVVVG-SGWAGLGAAHHLSKQG-FDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIG-aG~aGL~aA~~La~~G-~~V~vlE~~~ 80 (530)
+.++.|+|.| +|..|...|..|+++| ++|+++.++.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 3456799999 5999999999999999 8999998863
No 462
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=89.16 E-value=0.55 Score=46.18 Aligned_cols=38 Identities=24% Similarity=0.205 Sum_probs=32.8
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 43 NGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 43 ~~~~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
+..+.++|.|||+|-.|...+..+.+.|++|.+++..+
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 33456789999999999999999999999999998654
No 463
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.10 E-value=0.36 Score=44.61 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
..+|+|||+|-.|..+|..|++.|. +++|+|..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3689999999999999999999997 89999964
No 464
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=89.05 E-value=0.39 Score=45.18 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=30.6
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++.|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 357999996 9999999999999999999998875
No 465
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.02 E-value=0.59 Score=44.28 Aligned_cols=35 Identities=17% Similarity=0.356 Sum_probs=31.1
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 45 KNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 45 ~~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
...+.|+|.|| |..|...+..|.++|++|+++.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34467999998 999999999999999999999875
No 466
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.93 E-value=0.4 Score=43.44 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
..+|+|||+|-.|..+|..|++.|. +++|+|..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3689999999999999999999997 89999974
No 467
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.83 E-value=0.37 Score=53.44 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 80 (530)
.+|+|||||..|+-+|..|.+.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999876
No 468
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.82 E-value=0.48 Score=45.09 Aligned_cols=33 Identities=36% Similarity=0.485 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++|.|||+|..|.+.|..|++.|++|++.++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 579999999999999999999999999998764
No 469
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.81 E-value=0.45 Score=47.64 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+++|.|||.|..|..-|..|+++|++|++++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 368999999999999999999999999999875
No 470
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.81 E-value=0.2 Score=55.11 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=33.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 679999999999999999999999999999987653
No 471
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=88.81 E-value=0.52 Score=43.79 Aligned_cols=34 Identities=26% Similarity=0.557 Sum_probs=31.0
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 48 ~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
|+|+|.|| |..|-..+.+|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999998 99999999999999999999988653
No 472
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.80 E-value=0.45 Score=43.81 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=30.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
....|+|||+|-+|-++|+.|++.|. +|+|+.|+
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 34679999999999999999999996 99999875
No 473
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=88.78 E-value=0.65 Score=41.62 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=29.8
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
..+.|+|.|| |..|...|..|+++|++|+++.++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457999998 799999999999999999999875
No 474
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.76 E-value=0.35 Score=44.83 Aligned_cols=32 Identities=28% Similarity=0.472 Sum_probs=29.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+.|+|+|+|-.|.++|..|++.| +|+|+.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 457999999999999999999999 99999875
No 475
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.75 E-value=0.51 Score=45.21 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
..+.|+|+|.|-.|..+|..|.+.|.+|++.|.+
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3467999999999999999999999999999864
No 476
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.75 E-value=0.42 Score=45.50 Aligned_cols=37 Identities=30% Similarity=0.363 Sum_probs=30.7
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009646 45 KNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGNG 81 (530)
Q Consensus 45 ~~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~~ 81 (530)
..++.|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34578999998 99999999999999999999998754
No 477
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.69 E-value=0.47 Score=44.90 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=31.5
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 45 KNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 45 ~~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
...+.|+|.|| |..|...+..|+++|++|+++.++.
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34468999998 9999999999999999999998853
No 478
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.64 E-value=0.4 Score=47.78 Aligned_cols=36 Identities=25% Similarity=0.441 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--------------------CC-eEEEEcCCCCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ--------------------GF-DVTVLDDGNGF 82 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~--------------------G~-~V~vlE~~~~~ 82 (530)
..+|+|||+|..|+-+|..|++. |. +|+|+++.+.+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 46899999999999999999974 54 89999987654
No 479
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=88.53 E-value=0.37 Score=49.27 Aligned_cols=37 Identities=22% Similarity=0.473 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~~~ 82 (530)
..++|+|||+|.+|+-.|..|++.|.+|+++++.+..
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 3468999999999999999999999999999987643
No 480
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=88.51 E-value=0.53 Score=44.04 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
...+|+|+|+|-+|-++|+.|++.|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 34689999999999999999999998 89999886
No 481
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.44 E-value=0.46 Score=44.71 Aligned_cols=33 Identities=30% Similarity=0.539 Sum_probs=29.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
+++|+|||+|-.|.+.|+.|+..+. ++.++|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3789999999999999999999886 89999974
No 482
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=88.36 E-value=0.4 Score=44.41 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=28.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 48 ~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
++|.|||+|-.|.++|+.|..++. ++.|+|..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999998875 79999975
No 483
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=88.30 E-value=0.67 Score=41.48 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=29.9
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
..+.|+|.|| |..|...|.+|+++|++|+++.++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457999998 889999999999999999999875
No 484
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.19 E-value=0.34 Score=48.81 Aligned_cols=35 Identities=31% Similarity=0.505 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLG-AAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~-aA~~La~~G~~V~vlE~~~ 80 (530)
..++|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 4468999999999997 6999999999999999753
No 485
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=88.11 E-value=0.5 Score=45.03 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=30.8
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 47 KKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
++.|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 468999999 9999999999999999999999864
No 486
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=88.06 E-value=0.35 Score=48.84 Aligned_cols=55 Identities=16% Similarity=0.208 Sum_probs=41.5
Q ss_pred HHHHHHhcCCEEEcCceeeEEEecCCCCeEEEEEEC-CeeEecCEEEEccChhhHHHhh
Q 009646 254 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELI 311 (530)
Q Consensus 254 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll 311 (530)
+.+.+++.|++|+++++|++|..++ + +..+.++ ++++.+|.||+|+|.....+++
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~~--~-v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~ 318 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGNE--K-VERVIDMNNHEYKVDALIFADGRRPDINPI 318 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECSS--S-CCEEEETTCCEEECSEEEECCCEEECCHHH
T ss_pred HHHHHHhCCcEEEeCCeeEEEecCC--c-eEEEEeCCCeEEEeCEEEECCCcCcCchHH
Confidence 4467788999999999999998654 3 3345554 5689999999999977544343
No 487
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=87.96 E-value=0.38 Score=45.58 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=29.8
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC-------eEEEEcCC
Q 009646 46 NKKKIVVVGS-GWAGLGAAHHLSKQGF-------DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGa-G~aGL~aA~~La~~G~-------~V~vlE~~ 79 (530)
.+++|+|||| |..|.+.+..|...|+ +|.++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 3468999998 9999999999999885 79999865
No 488
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=87.90 E-value=0.85 Score=43.71 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=32.6
Q ss_pred CCCCCCcEEEECC-CHHHHHHHHHHHH--CCCeEEEEcCCCC
Q 009646 43 NGKNKKKIVVVGS-GWAGLGAAHHLSK--QGFDVTVLDDGNG 81 (530)
Q Consensus 43 ~~~~~~dVvIIGa-G~aGL~aA~~La~--~G~~V~vlE~~~~ 81 (530)
+....+.|+|.|| |..|...+..|.+ .|++|+++.+...
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 3445578999976 9999999999999 9999999987543
No 489
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.90 E-value=0.47 Score=44.00 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=29.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~--G~~V~vlE~~ 79 (530)
+++|.|||+|..|.+.|..|+++ |++|++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 35899999999999999999988 5799999875
No 490
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.87 E-value=0.35 Score=45.71 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=30.0
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHCC--CeEEEEcCCC
Q 009646 47 KKKIVVVG-SGWAGLGAAHHLSKQG--FDVTVLDDGN 80 (530)
Q Consensus 47 ~~dVvIIG-aG~aGL~aA~~La~~G--~~V~vlE~~~ 80 (530)
+++|+||| +|..|.+.+..|+++| .+|.++|...
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 46899999 7999999999999998 7899998654
No 491
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.84 E-value=0.56 Score=42.79 Aligned_cols=31 Identities=32% Similarity=0.477 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 49 dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
+|+|||+|..|-..|..|.+.|.+|++++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 492
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.80 E-value=0.58 Score=44.15 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=30.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~--~V~vlE~~ 79 (530)
.+++|+|||+|-.|.+.|+.|+..+. ++.++|..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 44789999999999999999998886 89999974
No 493
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=87.80 E-value=0.41 Score=44.95 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=29.7
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCC--CeEEEEcCCC
Q 009646 48 KKIVVVGS-GWAGLGAAHHLSKQG--FDVTVLDDGN 80 (530)
Q Consensus 48 ~dVvIIGa-G~aGL~aA~~La~~G--~~V~vlE~~~ 80 (530)
++|+|||| |..|.+.|+.|++.| .+|.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999988 6899999864
No 494
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=87.75 E-value=0.51 Score=49.84 Aligned_cols=38 Identities=26% Similarity=0.461 Sum_probs=33.8
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009646 46 NKKKIVVVG--SGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (530)
Q Consensus 46 ~~~dVvIIG--aG~aGL~aA~~La~~G~~V~vlE~~~~~G 83 (530)
...+|+||| +|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 345799999 99999999999999999999999987664
No 495
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=87.70 E-value=0.38 Score=48.64 Aligned_cols=57 Identities=23% Similarity=0.188 Sum_probs=41.0
Q ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCeEEEEcCCCCCCCCcccccccccccHHHHHHHhCCCC
Q 009646 49 KIVVVGSGWAGLGAAHHLSKQ--------------GFDVTVLDDGNGFGSPDDISFWYPFRNIFSLVDELGIKP 108 (530)
Q Consensus 49 dVvIIGaG~aGL~aA~~La~~--------------G~~V~vlE~~~~~GG~~~~g~~~~~~~~~~~~~~lg~~~ 108 (530)
.++|||||+.|+-.|..|++. +.+|+|+|+.+++-..++... ...+.+.+++.|++.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~---~~~~~~~L~~~GV~v 289 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKL---SSYAQSHLENTSIKV 289 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHH---HHHHHHHHHHTTCEE
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHH---HHHHHHHHHhcceee
Confidence 699999999999999988753 368999999998755433100 112456677888873
No 496
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.69 E-value=0.63 Score=43.06 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=30.2
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCC
Q 009646 47 KKKIVVVG-SGWAGLGAAHHLSKQGFDVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIG-aG~aGL~aA~~La~~G~~V~vlE~~ 79 (530)
.+.|+|+| +|-.|..+|..|++.|.+|+++.++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 46799999 8999999999999999999999875
No 497
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.63 E-value=0.54 Score=45.70 Aligned_cols=35 Identities=31% Similarity=0.343 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
....|+|||.|..|..+|..|...|.+|++.|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 44689999999999999999999999999999764
No 498
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.61 E-value=1.1 Score=42.51 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009646 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (530)
Q Consensus 46 ~~~dVvIIGaG~aGL~aA~~La~~G~~V~vlE~~~ 80 (530)
..++|.|||.|..|...|..|+..|++|++++++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 44679999999999999999999999999999864
No 499
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.56 E-value=0.57 Score=42.89 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~-~V~vlE~~ 79 (530)
..+|+|||+|-+|-++|+.|.+.|. +|+|+.|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3579999999999999999999997 89999875
No 500
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=87.35 E-value=0.55 Score=46.01 Aligned_cols=31 Identities=26% Similarity=0.544 Sum_probs=29.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---eEEEEc
Q 009646 47 KKKIVVVGSGWAGLGAAHHLSKQGF---DVTVLD 77 (530)
Q Consensus 47 ~~dVvIIGaG~aGL~aA~~La~~G~---~V~vlE 77 (530)
..+|+|+|+|-+|.++|..|.+.|. +|+|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4679999999999999999999998 899999
Done!