BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009648
(530 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1
SV=1
Length = 641
Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust.
Identities = 306/553 (55%), Positives = 373/553 (67%), Gaps = 36/553 (6%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A+PT +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
VK+MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182
Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242
Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302
Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
K+VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K + E ++
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPT-----APSGKKDSTIVDGLPMSGISDA 415
E P + K PLSPY SYEDLKPPTSP P +P+ K+ + +
Sbjct: 363 DEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPV 422
Query: 416 QTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPS---------------SPSPT 460
STS V + V E K RPLSPY YE+LKPPS SP PT
Sbjct: 423 PDSTSNVPVVEVKQV----EEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSPGPT 478
Query: 461 PSGPKEVLSSSSTTGE--VASQLTGGNDVAKTPDTSLVEK-----NPIVNSIHHHSPYHM 513
S + + + T E VA+ +T + P+T++ P + + SPY +
Sbjct: 479 DSDTDKSSTVAKTVTETAVATSVTETSVATSVPETAVATSVTETAAPATSKMRPLSPYAI 538
Query: 514 YEDLKPPTSPIPS 526
Y DLKPPTSP P+
Sbjct: 539 YADLKPPTSPTPA 551
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 103/209 (49%), Gaps = 54/209 (25%)
Query: 366 QTKAKVTDPLSPYTSYEDLKPPT---------------SPTPTAPSGKKDSTIVDGLPMS 410
Q + K PLSPY YE+LKPP+ SP PT K ST+ + +
Sbjct: 436 QVEEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSPGPTDSDTDKSSTVAKTVTET 495
Query: 411 GISDAQTSTS--------GVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPS 462
++ + T TS V T +TET +AP SK RPLSPY Y DLKPP+SP+P +
Sbjct: 496 AVATSVTETSVATSVPETAVATSVTET-AAPA-TSKMRPLSPYAIYADLKPPTSPTPAST 553
Query: 463 GPKEVLSSSSTTGEVASQLTGG-NDVAKTPDTSLV-------EKNPIVNSI--------- 505
GPKE S E S+L GG NDV KT D +L E P+V+S
Sbjct: 554 GPKEAASV-----EDNSELPGGNNDVLKTVDGNLNTIPPSTPEAVPVVSSAIDTSLASGD 608
Query: 506 -------HHHSPYHMYEDLKPPTSPIPSP 527
SPY MY D+KPPTSP+PSP
Sbjct: 609 NTAQPKPRPLSPYTMYADMKPPTSPLPSP 637
>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2
Length = 534
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 315/557 (56%), Positives = 371/557 (66%), Gaps = 54/557 (9%)
Query: 1 MEICSLQSQTLSTIPSPLSRNG---------LIVKSFGSCQILKFPSSKKFSHPR----K 47
ME+ SL S + IPS L+R L + + +++P + ++ R
Sbjct: 3 MEVFSLTS---TAIPSTLTRRDTAADKPSPHLNLSKY--SHFMRYPLTTTLTNNRIRSSS 57
Query: 48 LKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRV 107
+AQASG+ S P K DSKDDNL FVAGATGKVGSRTVREL+KLGF+V
Sbjct: 58 SSSSSIRAQASGSTK--SSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFKV 115
Query: 108 RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVV 167
RAGVR+ Q+A LVQSVKQ+KLDG A+ G + VE LE+VECDLEK QI ALGNAS V
Sbjct: 116 RAGVRNAQKAGALVQSVKQLKLDG--ASGGGEAVEKLEIVECDLEKADQIGSALGNASTV 173
Query: 168 ICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNL 227
IC IGASEKE+FDITGP RID++ATKNLVDAAT+AKVNHFI+V+SLGTNKFG PAAILNL
Sbjct: 174 ICAIGASEKEIFDITGPCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNL 233
Query: 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ 287
FWGVL+WKRKAEEAL+ASG+PYTIVRPGGMERPTDAYKETHN+TLS EDTLFGGQVSNLQ
Sbjct: 234 FWGVLIWKRKAEEALLASGIPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQ 293
Query: 288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAA 347
VAEL+A MAKN LSYCK+VEVIAETTAPLTP E+LL +IPSQR +K+D A
Sbjct: 294 VAELMAIMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTRIPSQRPYIPSPKKVQKADTAT 353
Query: 348 ------SKSMISEESS-APITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKD 400
S ++++E S AP E + AK PLSPYT+Y+DLKPP+SP+PT PS KK
Sbjct: 354 VSNTGPSANVVAEVPSIAPQKETASKPVAKTEQPLSPYTAYDDLKPPSSPSPTKPSEKKQ 413
Query: 401 STIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKAR-PLSPYFAYEDLKPPSSPSP 459
I D +P SD +S + GI++T S+ SK + LSPY AY DLK SP
Sbjct: 414 INISDAVPTPISSDTPSSIQEID-GISQTTSS----SKGKESLSPYAAYPDLK--PPSSP 466
Query: 460 TPSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHH-------SPYH 512
+PS P LS T V S + P VE P H H SPY
Sbjct: 467 SPSVPTTSLSKRDTV--VVS--------SNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYA 516
Query: 513 MYEDLKPPTSPIPSPKK 529
MYEDLKPP SP PS +K
Sbjct: 517 MYEDLKPPASPSPSFRK 533
>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis
thaliana GN=At2g34460 PE=1 SV=1
Length = 280
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 28/253 (11%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
FVAGATG+ G R V +LL GF V+AGVR V++A+ + +++ +G P ++
Sbjct: 50 FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
E++ D + VIC G + FDI P+++D T NLVDA
Sbjct: 108 AEVIGDD-------------SQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRKQG 152
Query: 204 VNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
V F++VSS+ N PA + LNLF L+ K +AE+ + SG+ YTIVRPGG+
Sbjct: 153 VEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGL 212
Query: 258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL 317
+ T N+ + EDTL+ G +S VAE +A A + S KVVE++A AP
Sbjct: 213 KNDP----PTGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARAEAPK 267
Query: 318 TPMEELLAKIPSQ 330
++L A + Q
Sbjct: 268 RSYKDLFASVKGQ 280
>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis
thaliana GN=At2g37660 PE=1 SV=2
Length = 325
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 52/263 (19%)
Query: 43 SHPRKLKLPDFKAQASGTINIC--------SEAVGATPTKADSKDDNLAFVAGATGKVGS 94
S PR L F++ S + +IC + V T + A + + V GA G+ G
Sbjct: 32 SVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAGGRTGQ 90
Query: 95 RTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152
++L + F R VR+ + E K++GE E+ D+
Sbjct: 91 IVYKKLKERSEQFVARGLVRTKESKE---------KINGED-----------EVFIGDIR 130
Query: 153 KRVQIEPALGNASVVICCIGA-------------SEKEVFDITGPY--RIDFQATKNLVD 197
I PA+ ++ A E F G Y ++D+ KN +D
Sbjct: 131 DTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQID 190
Query: 198 AATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
AA A V ++V S+G P +I N +L+WKRKAE+ L SG+PYTI+R GG
Sbjct: 191 AAKAAGVKQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGG 248
Query: 257 MERPTDAYKETHNITLSQEDTLF 279
++ +E + + ++D L
Sbjct: 249 LQDKDGGIRE---LLVGKDDELL 268
>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana
GN=At5g02240 PE=1 SV=1
Length = 253
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 32/262 (12%)
Query: 84 FVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKG 137
V GA+G+ G + V + LK G F + VRS Q E + D + N
Sbjct: 8 LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66
Query: 138 IQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLV 196
Q ++ L ++ + K + +P G I G P ++D+ KN +
Sbjct: 67 FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQY---------PEQVDWIGQKNQI 117
Query: 197 DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
DAA +A V H ++V S+G P L +L+WKRKAE+ L SG PYTI+R GG
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPYTIIRAGG 176
Query: 257 MERPTDAYKETHNITLSQEDTLFG--------GQVSNLQVAELLACMAKNRSLSYCKVVE 308
+ +E + + ++D L V+ + + LL AKN++ E
Sbjct: 177 LLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE 233
Query: 309 VIAETTAPLTPMEELLAKIPSQ 330
T+ P + L +++ S+
Sbjct: 234 ---GTSTPTKDFKALFSQVTSR 252
>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3
SV=1
Length = 321
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG +G + VR L G++VR VR++++A L + ++ + G+L+ QP +L
Sbjct: 5 VIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFLKEWGAKL-IWGDLS----QPESLL 59
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
PAL V+I S D G Y++D + K L+DAA K+
Sbjct: 60 --------------PALTGIRVII---DTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKI 102
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
FI S L + K+ ++ + K EE L SGL YTI + G
Sbjct: 103 EKFIFFSILNSEKYS-QVPLMRI-------KTVTEELLKESGLNYTIFKLCGF 147
>sp|Q9UT59|YKJ7_SCHPO Putative uncharacterized oxidoreductase C513.07
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC513.07 PE=3 SV=1
Length = 336
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122
L V G TG +G+ +LL+ G+RVR VRS+++A+ L++
Sbjct: 5 LVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIR 45
>sp|P73212|DFRA_SYNY3 Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1
Length = 343
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 20/130 (15%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
FV G TG VG+ VR LL+ G++VRA VR+ R +NL + + +D +
Sbjct: 14 FVTGGTGFVGANLVRHLLEQGYQVRALVRASSRPDNL----QNLPIDWVVG--------- 60
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+L + DL +++Q L + + + ++E YR + T+N++ A A
Sbjct: 61 -DLNDGDLHQQMQGCQGLFHVAAHY-SLWQKDREAL-----YRSNVLGTRNILACAQKAG 113
Query: 204 VNHFIMVSSL 213
+ + SS+
Sbjct: 114 IERTVYTSSV 123
>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3
SV=1
Length = 319
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 32/175 (18%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG +G + VR L G+ V+ VR+++++ L K G
Sbjct: 4 LVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFL-------KEWGA----------- 45
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
ELV DL+ E L + V I AS D +ID L++AA AK
Sbjct: 46 -ELVYGDLKLP---ESILQSFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAK 101
Query: 204 VNHFIMVSSLGTNKFGFPAA-ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
V FI S L ++ +P ++NL K + L S + YT+ GG
Sbjct: 102 VQRFIFFSILNADQ--YPKVPLMNL-------KSQVVNYLQKSSISYTVFSLGGF 147
>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3
SV=1
Length = 319
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 32/175 (18%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG +G + VR L G+ V+ VR+++++ L +
Sbjct: 4 LVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFLKEWGA------------------ 45
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
EL+ DL+ E L + V I AS + D +ID L++AA AK
Sbjct: 46 -ELIYGDLKLP---ESILQSFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAK 101
Query: 204 VNHFIMVSSLGTNKFGFPAA-ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
V FI S L + K +P ++NL K + + L S + Y + GG
Sbjct: 102 VERFIFFSILNSEK--YPDVPLMNL-------KSQVVDFLQKSNVKYIVFSLGGF 147
>sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain
168) GN=yhfK PE=2 SV=1
Length = 214
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 24/175 (13%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
F+ GA G++G R V +R++ R E S++ + LAN P E
Sbjct: 4 FLIGANGQIGQRLVSLFQD---NPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEE- 59
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
I A +I G+ +D T +D ++AA IA
Sbjct: 60 -------------IAAAAKGCDAIIFTAGSGGSTGYDKT--LLVDLDGAAKAIEAAAIAG 104
Query: 204 VNHFIMVSSL-GTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
+ FIMVS+L N+ + A+ + + K A++ L ASGL YTI+RPGG+
Sbjct: 105 IKRFIMVSALQAHNRENWNEALKPYY----VAKHYADKILEASGLTYTIIRPGGL 155
>sp|Q1E2F1|MDM12_COCIM Mitochondrial distribution and morphology protein 12
OS=Coccidioides immitis (strain RS) GN=MDM12 PE=3 SV=1
Length = 446
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 52/136 (38%), Gaps = 38/136 (27%)
Query: 331 RAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSP 390
R EP + P K DP AS+ P+++ DPL+PY P +
Sbjct: 123 RIEPHDVPIPSKEDPLASR--------------PIRSPMSFGDPLNPYFF------PRAG 162
Query: 391 TPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYED 450
TP P G + +P+ GIS QT S V G P SP
Sbjct: 163 TPGIPGGTSNLGYY-YMPLGGISGTQTPLSSVPRG---------------PFSPGLRDAS 206
Query: 451 L--KPPSSPSPTPSGP 464
+ +P +S P PSGP
Sbjct: 207 VFGEPSNSQRPNPSGP 222
>sp|Q04304|YMY0_YEAST UPF0659 protein YMR090W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YMR090W PE=1 SV=1
Length = 227
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215
+I A+ V+ GA K + I + +D +V+A A + F++VS+L
Sbjct: 65 EITDAIKAYDAVVFSAGAGGKGMERI---FTVDLDGCIKVVEACEKAGIKRFVVVSALKA 121
Query: 216 NKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGME--------RPTDAYKE- 266
F I L + KR A+ + S L YTI++PG +E +P D +E
Sbjct: 122 EDRDFWYNIKGL-REYYIAKRSADREVRNSNLDYTILQPGSLELNKGTGLLQPLDKLEEK 180
Query: 267 -THNITLSQEDT 277
+ N ++++ED
Sbjct: 181 ASVNYSINREDV 192
>sp|Q6BLA6|FMP52_DEBHA Protein FMP52, mitochondrial OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=FMP52 PE=3 SV=1
Length = 226
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
AF+ G+TG VG+ +LLK V + V +V + +DG +G+
Sbjct: 3 AFIIGSTGLVGA----QLLK--------VAAESNKFETVHTVSRRPVDGRDKVQGV---- 46
Query: 143 MLELVECDLEKRVQI--EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
VE D K ++ E + G G + + + +ID+ AA
Sbjct: 47 ----VETDTAKWPEVIRENSKG-VRTFFSAFGTTRADAGGVENFKKIDYGINYECAKAAK 101
Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYT-IVRPGGM 257
A + F++VSSLG N+ LF+ L K K E +IA P T I+RPG +
Sbjct: 102 EAGIETFVLVSSLGANESSM------LFY--LKSKGKLENDIIALEFPRTIIIRPGAL 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,346,188
Number of Sequences: 539616
Number of extensions: 8543885
Number of successful extensions: 30553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 794
Number of HSP's that attempted gapping in prelim test: 27846
Number of HSP's gapped (non-prelim): 2560
length of query: 530
length of database: 191,569,459
effective HSP length: 122
effective length of query: 408
effective length of database: 125,736,307
effective search space: 51300413256
effective search space used: 51300413256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)