Query 009651
Match_columns 530
No_of_seqs 199 out of 1108
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 09:59:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009651.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009651hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 1E-164 4E-169 1370.5 36.8 497 27-529 39-559 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 5E-155 2E-159 1299.0 40.0 508 17-529 1-515 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 1E-150 4E-155 1260.0 34.7 487 27-529 5-491 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 3E-147 1E-151 1232.1 35.9 477 28-529 5-481 (796)
5 3vue_A GBSS-I, granule-bound s 97.3 0.0035 1.2E-07 67.8 15.1 132 331-494 152-288 (536)
6 3nb0_A Glycogen [starch] synth 58.7 2.8 9.6E-05 47.3 1.1 113 332-494 181-297 (725)
7 3s4e_A Dual specificity protei 37.4 58 0.002 27.9 6.0 37 332-372 82-121 (144)
8 3emu_A Leucine rich repeat and 35.1 60 0.0021 28.7 5.9 37 332-372 88-127 (161)
9 1uqt_A Alpha, alpha-trehalose- 34.2 35 0.0012 36.2 4.8 55 330-405 121-175 (482)
10 3ezz_A Dual specificity protei 33.2 80 0.0027 26.9 6.2 39 331-373 81-122 (144)
11 3u7q_B Nitrogenase molybdenum- 29.9 2.3E+02 0.0077 30.5 10.3 133 17-163 310-470 (523)
12 3t5t_A Putative glycosyltransf 23.7 1.2E+02 0.0041 32.5 6.7 67 332-419 149-230 (496)
13 2k84_A P9; HOST-virus interact 22.5 25 0.00087 23.6 0.7 14 286-306 1-14 (30)
14 2j16_A SDP-1, tyrosine-protein 21.0 1.7E+02 0.0058 26.7 6.3 38 331-372 117-157 (182)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=1.3e-164 Score=1370.51 Aligned_cols=497 Identities=47% Similarity=0.840 Sum_probs=478.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEEEehhhcccchhHHHhhc
Q 009651 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (530)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~n 106 (530)
+++++|++.|.+||++++|+++.+|+..++|.|||.+|||+|+++|.+|++.+.+.++|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHH-------------HHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEE
Q 009651 107 LDIQNAY-------------ADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQ 173 (530)
Q Consensus 107 lg~~~~~-------------~eaL~~lG~~~~~i~~~E~D~~LgnGGLGrLAacfLdS~AtL~lP~~G~GirY~yG~F~Q 173 (530)
||+++++ ++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeeeeecccccccCCCcccccCCeEEEEEECCeEEe--cC-CCcee--eeCCeEEEEEEeeeccCCCCCCceEEEE
Q 009651 174 KITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (530)
Q Consensus 174 ~I~dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~--~~-~g~~~--w~~~~~V~av~yD~pi~Gy~~~~~n~LR 248 (530)
+|.||||+|.||+||..|||||++|++.+++|+|+|+|+. +. +|+.+ |++++.|+|||||+|||||+|+++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 44 78654 9999999999999999999999999999
Q ss_pred EEecccCCcccCccCCCcchhhhHHhhhhhhhcceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccCcccc
Q 009651 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 328 (530)
Q Consensus 249 LW~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRLkQeyfl~~aslqdiir~~~~~~gg~~l~ 328 (530)
||+|+ +...|||+.||.|||.+|+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.+ .+|+
T Consensus 279 LW~a~-~~~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~--~~l~ 355 (879)
T 1ygp_A 279 LWQAR-PTTEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSK--RPWT 355 (879)
T ss_dssp EEEEE-ESCSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CCGG
T ss_pred EEEec-cCcccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhC--CChh
Confidence 99999 55589999999999999999999999999999999999999999999999999999999999999887 4799
Q ss_pred cCCCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhceeeeeccccccccccCcHHHHHHHchHHHHHHHHHH
Q 009651 329 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 408 (530)
Q Consensus 329 ~l~~~~~ihlNDtHpalai~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpealE~wp~~l~~~lLpr~~~iI~eIn 408 (530)
.|+++++|||||||||||||||||+|+|++|++|++||+||+++|+||||||||||||+||++||+++||||++||++||
T Consensus 356 ~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein 435 (879)
T 1ygp_A 356 EFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDIN 435 (879)
T ss_dssp GHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCChhhhhcccccccCCCCC--eeeeeehhhccCCchhhhHHHhHHHHHHhhhccchhccCC-Cccccc
Q 009651 409 KRFIAMVRSTRSDLESKIPSMCILDNNPKKP--VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPN-KLQNKT 485 (530)
Q Consensus 409 ~~f~~~~~~~~~~~~~~~~~lsii~~~~~~~--~v~Ma~Lai~~S~~vNGVS~lHseilk~~~f~df~~l~P~-kf~n~T 485 (530)
++|++.++.++|+|.+++.+||||++ +++ +||||+||+++||+|||||+|||+|+|+++|++|+++||+ ||+|||
T Consensus 436 ~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~T 513 (879)
T 1ygp_A 436 WFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVT 513 (879)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECC
T ss_pred HHHHHHHHHHcCCCHHHHHhcceecc--CCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcC
Confidence 99999999999999999999999987 443 8999999999999999999999999999999999999999 999999
Q ss_pred cCCCcccccccCChHHHHHHHhhcC---CcccccCHHhHHHHHhhhh
Q 009651 486 NGITPRRWLRFCNPELSKIITKWLK---TDQWVTNLDLLVGLRQVYM 529 (530)
Q Consensus 486 NGVt~rrWl~~~Np~L~~li~~~iG---~~~W~~dl~~L~~L~~~~~ 529 (530)
||||+|||+.+|||+|++||+++|| + +|.+++++|++|++|++
T Consensus 514 NGVt~rrWl~~~Np~L~~Li~~~iG~~~~-~W~~d~~~L~~l~~~~~ 559 (879)
T 1ygp_A 514 NGITPRRWLKQANPSLAKLISETLNDPTE-EYLLDMAKLTQLEKYVE 559 (879)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHTTCTTC-GGGTCGGGGGGGGGGGG
T ss_pred CCcCCchhhhhcCHHHHHHHHHhcCCChh-hhhhCHHHHHHHHhhCC
Confidence 9999999999999999999999999 6 99999999999999986
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=4.8e-155 Score=1299.05 Aligned_cols=508 Identities=47% Similarity=0.827 Sum_probs=477.2
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEEEehhhcc
Q 009651 17 KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQ 96 (530)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~ 96 (530)
||++++.....++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++.+...++|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~ 80 (824)
T 2gj4_A 1 QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYM 80 (824)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEE
T ss_pred CcccccccccccHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcc
Confidence 57777654444678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHhhcCCcHHHHHHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEEEEe
Q 009651 97 GRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT 176 (530)
Q Consensus 97 Gr~L~nnl~nlg~~~~~~eaL~~lG~~~~~i~~~E~D~~LgnGGLGrLAacfLdS~AtL~lP~~G~GirY~yG~F~Q~I~ 176 (530)
||+|.|||+|||+++++++||+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+
T Consensus 81 gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~ 160 (824)
T 2gj4_A 81 GRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC 160 (824)
T ss_dssp ECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE
T ss_pred hhhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeecccccccCCCcccccCCeEEEEEECCeEEecCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEecccCC
Q 009651 177 KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASA 256 (530)
Q Consensus 177 dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~V~av~yD~pi~Gy~~~~~n~LRLW~a~v~~ 256 (530)
||||+|.||+||+.|||||++|++.+++|+|+|+|+.+.+|. +|++++.|+|+|||+|||||+|++||+||||+|+ ++
T Consensus 161 dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~ 238 (824)
T 2gj4_A 161 GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-AP 238 (824)
T ss_dssp TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CC
T ss_pred CCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEEee-cC
Confidence 999999999999999999999999999999999998767783 6999999999999999999999999999999999 78
Q ss_pred cccCccCCCcchhhhHHhhhhhhhcceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccC------cccccC
Q 009651 257 EDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------RQWSEF 330 (530)
Q Consensus 257 ~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRLkQeyfl~~aslqdiir~~~~~~gg------~~l~~l 330 (530)
+.|||..||.|+|..++.+++.+++||+||||+|++++||+|||||||||||||+|||||+|++.+.| .+|+.|
T Consensus 239 ~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~ 318 (824)
T 2gj4_A 239 NDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAF 318 (824)
T ss_dssp C----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGH
T ss_pred cccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhc
Confidence 89999999999999999999999999999999999999999999999999999999999999876411 368899
Q ss_pred CCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhceeeeeccccccccccCcHHHHHHHchHHHHHHHHHHHH
Q 009651 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (530)
Q Consensus 331 ~~~~~ihlNDtHpalai~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpealE~wp~~l~~~lLpr~~~iI~eIn~~ 410 (530)
+++++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++
T Consensus 319 ~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 319 PDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCChhhhhcccccccCCCCC-eeeeeehhhccCCchhhhHHHhHHHHHHhhhccchhccCCCccccccCCC
Q 009651 411 FIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGIT 489 (530)
Q Consensus 411 f~~~~~~~~~~~~~~~~~lsii~~~~~~~-~v~Ma~Lai~~S~~vNGVS~lHseilk~~~f~df~~l~P~kf~n~TNGVt 489 (530)
|+..++.++|++.+.+.+|+++++ +.. +||||+|||++|++|||||++|++++|+.+|++|+++||+||+|||||||
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~--~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~ 476 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEE--GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGIT 476 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEEC--SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBC
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhh--cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcC
Confidence 999999999999999999999986 433 99999999999999999999999999999999999999999999999999
Q ss_pred cccccccCChHHHHHHHhhcCCcccccCHHhHHHHHhhhh
Q 009651 490 PRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQVYM 529 (530)
Q Consensus 490 ~rrWl~~~Np~L~~li~~~iG~~~W~~dl~~L~~L~~~~~ 529 (530)
+|||+.+|||+++++|++.||+ +|.+|+++|++|.+|++
T Consensus 477 ~rrWl~~~NP~l~~lI~~~ig~-~W~~~~~~l~~L~~y~~ 515 (824)
T 2gj4_A 477 PRRWLVLCNPGLAEIIAERIGE-EYISDLDQLRKLLSYVD 515 (824)
T ss_dssp TCCCCCCTCHHHHHHHHHHHCS-GGGGCGGGGGGGGGGTT
T ss_pred hhhhcccCCHhHHHHHHHhcCc-hhhhCHHHHHHHHhccc
Confidence 9999999999999999999997 99999999999999985
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=1.2e-150 Score=1259.95 Aligned_cols=487 Identities=42% Similarity=0.718 Sum_probs=473.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEEEehhhcccchhHHHhhc
Q 009651 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (530)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~n 106 (530)
.++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++ .++|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l~n 80 (796)
T 1l5w_A 5 FNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLLN 80 (796)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHHHh
Confidence 478899999999999999999999999999999999999999999999996 4579999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEEEEeCCeeeeeccc
Q 009651 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (530)
Q Consensus 107 lg~~~~~~eaL~~lG~~~~~i~~~E~D~~LgnGGLGrLAacfLdS~AtL~lP~~G~GirY~yG~F~Q~I~dG~QvE~pd~ 186 (530)
||+++++++||+++|+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 81 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~ 160 (796)
T 1l5w_A 81 LGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (796)
T ss_dssp HTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeEEEEEECCeEEecCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEecccCCcccCccCCCc
Q 009651 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (530)
Q Consensus 187 Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~V~av~yD~pi~Gy~~~~~n~LRLW~a~v~~~~~~l~~~~~ 266 (530)
|++.|+|||++|++.+++|+|+|+|+. + + +|++++.|+|+|||+|||||+|+++|+||||+|++ .+.|||..||.
T Consensus 161 wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~-~~~f~l~~fn~ 235 (796)
T 1l5w_A 161 WHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATH-AHPFDLTKFND 235 (796)
T ss_dssp CCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEEC-SSCCCHHHHHT
T ss_pred cccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEecc-CcccChhhcCC
Confidence 999999999999999999999999974 2 3 69999999999999999999999999999999994 45899999999
Q ss_pred chhhhHHhhhhhhhcceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccCcccccCCCCeEEEeCCCchhhh
Q 009651 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (530)
Q Consensus 267 g~y~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRLkQeyfl~~aslqdiir~~~~~~gg~~l~~l~~~~~ihlNDtHpala 346 (530)
|+|.+|+++++.+|+||+||||+|++++||+||||||||||+||+|+|+|+|++.+ .+++.|+++++||||||||||+
T Consensus 236 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~--~~~~~l~~p~viHlNDtHpal~ 313 (796)
T 1l5w_A 236 GDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELADYEVIQLNDTHPTIA 313 (796)
T ss_dssp TCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTH
T ss_pred ccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcC--CChhhcCCccEEEecCCccHhH
Confidence 99999999999999999999999999999999999999999999999999999887 4788999999999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHhhceeeeeccccccccccCcHHHHHHHchHHHHHHHHHHHHHHHHHHhhCCCChhhh
Q 009651 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (530)
Q Consensus 347 i~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpealE~wp~~l~~~lLpr~~~iI~eIn~~f~~~~~~~~~~~~~~~ 426 (530)
+|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||++|++++..++|.|.+.+
T Consensus 314 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~ 393 (796)
T 1l5w_A 314 IPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVW 393 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCCeeeeeehhhccCCchhhhHHHhHHHHHHhhhccchhccCCCccccccCCCcccccccCChHHHHHHH
Q 009651 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (530)
Q Consensus 427 ~~lsii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lHseilk~~~f~df~~l~P~kf~n~TNGVt~rrWl~~~Np~L~~li~ 506 (530)
.+++++++ + +||||+|||++||+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||+++++|+
T Consensus 394 ~~~~i~~~--~--~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~ 469 (796)
T 1l5w_A 394 AKLAVVHD--K--QVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLD 469 (796)
T ss_dssp HHHCSEET--T--EEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHH
T ss_pred hhhhcccC--C--cccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHH
Confidence 99999876 6 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcccccCHHhHHHHHhhhh
Q 009651 507 KWLKTDQWVTNLDLLVGLRQVYM 529 (530)
Q Consensus 507 ~~iG~~~W~~dl~~L~~L~~~~~ 529 (530)
+.+|+ +|.+|+++|++|++|++
T Consensus 470 ~~~g~-~w~~d~~~l~~l~~~~~ 491 (796)
T 1l5w_A 470 KSLQK-EWANDLDQLINLEKFAD 491 (796)
T ss_dssp HHCSS-CCTTCGGGGGGGGGGGG
T ss_pred HhcCc-ccccCHHHHHHHHhcCC
Confidence 99996 99999999999999876
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=3.4e-147 Score=1232.12 Aligned_cols=477 Identities=44% Similarity=0.718 Sum_probs=462.1
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEEEehhhcccchhHHHhhcC
Q 009651 28 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSL 107 (530)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~Gr~L~nnl~nl 107 (530)
++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++.+.+. |+||||||||||||+|.|||+||
T Consensus 5 ~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~nl 82 (796)
T 2c4m_A 5 KQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTNL 82 (796)
T ss_dssp -CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHhc
Confidence 4567999999999999999999999999999999999999999999999887653 99999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEEEEeCCeeeeecccc
Q 009651 108 DIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDW 187 (530)
Q Consensus 108 g~~~~~~eaL~~lG~~~~~i~~~E~D~~LgnGGLGrLAacfLdS~AtL~lP~~G~GirY~yG~F~Q~I~dG~QvE~pd~W 187 (530)
|+++++++||+++|+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+|
T Consensus 83 g~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~w 162 (796)
T 2c4m_A 83 GLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPW 162 (796)
T ss_dssp TCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCS
T ss_pred ccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcccccCCeEEEEEECCeEEecCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEecccCCcccCccCCCcc
Q 009651 188 LEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG 267 (530)
Q Consensus 188 l~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~V~av~yD~pi~Gy~~~~~n~LRLW~a~v~~~~~~l~~~~~g 267 (530)
++.|+|||++|++.+++|+|+|+ .|.|+|||+|||||+|+++|+||||+|+ +.+.|+|..||.|
T Consensus 163 l~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~-~~~~f~l~~fn~g 226 (796)
T 2c4m_A 163 REEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAE-PWEEFDYDAFNAQ 226 (796)
T ss_dssp SSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEE-ESSSSCHHHHHTT
T ss_pred ccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecc-cccccchhhccCc
Confidence 99999999999999999999996 4889999999999999999999999999 5558999999999
Q ss_pred hhhhHHhhhhhhhcceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHcccCcccccCCCCeEEEeCCCchhhhH
Q 009651 268 QYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAI 347 (530)
Q Consensus 268 ~y~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRLkQeyfl~~aslqdiir~~~~~~gg~~l~~l~~~~~ihlNDtHpalai 347 (530)
+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+ .+|+.|+++++||+|||||||++
T Consensus 227 dy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~--~~l~~l~~p~viHlNDtHpal~i 304 (796)
T 2c4m_A 227 RFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHH--KDLSNFAEFHSVQLNDTHPVLAI 304 (796)
T ss_dssp CHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SCSTTHHHHEEEEEESSTTTTHH
T ss_pred chhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhC--CChhhcCCCeEEEeCCChHHhHH
Confidence 9999999999999999999999999999999999999999999999999999887 37889999999999999999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHhhceeeeeccccccccccCcHHHHHHHchHHHHHHHHHHHHHHHHHHhhCCCChhhhh
Q 009651 348 PELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIP 427 (530)
Q Consensus 348 ~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpealE~wp~~l~~~lLpr~~~iI~eIn~~f~~~~~~~~~~~~~~~~ 427 (530)
|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||++|+.++..+ |+|.+++.
T Consensus 305 ~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~~ 383 (796)
T 2c4m_A 305 PELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETIN 383 (796)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHHH
T ss_pred HHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CCcHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred cccccccCCCCCeeeeeehhhccCCchhhhHHHhHHHHHHhhhccchhccCCCccccccCCCcccccccCChHHHHHHHh
Q 009651 428 SMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITK 507 (530)
Q Consensus 428 ~lsii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lHseilk~~~f~df~~l~P~kf~n~TNGVt~rrWl~~~Np~L~~li~~ 507 (530)
+++++++ + +||||+|||++||+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||+++++|++
T Consensus 384 ~~~i~~~--~--~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~ 459 (796)
T 2c4m_A 384 RMAPIQH--G--TVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTR 459 (796)
T ss_dssp HHCSEET--T--EEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHH
T ss_pred cccceeC--C--cccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHH
Confidence 9999876 6 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcccccCHHhHHHHHhhhh
Q 009651 508 WLKTDQWVTNLDLLVGLRQVYM 529 (530)
Q Consensus 508 ~iG~~~W~~dl~~L~~L~~~~~ 529 (530)
.+|+++|.+|+++|++|++|++
T Consensus 460 ~~g~~~w~~d~~~l~~l~~~~~ 481 (796)
T 2c4m_A 460 LSGSDDWVTDLDELKKLRSYAD 481 (796)
T ss_dssp HHSSSGGGGCGGGGGGGGGGGG
T ss_pred hcCchhhhhChHHHHHHHhhCC
Confidence 9993389999999999999875
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.26 E-value=0.0035 Score=67.81 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=75.4
Q ss_pred CCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhceeeeeccccccccccCcHHHHHHHc-hHHHHHHHHHHH
Q 009651 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLL-PRHMEIIEEIDK 409 (530)
Q Consensus 331 ~~~~~ihlNDtHpalai~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpealE~wp~~l~~~lL-pr~~~iI~eIn~ 409 (530)
...+++|.||-|.+++.+.+ +......+. .....++||.|++...+. ||.+.+..+. |...
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l-~~~~~~~~~-------~~~~~~V~TiHnl~~qg~--~~~~~~~~~~~~~~~-------- 213 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYL-KNNYQPNGI-------YRNAKVAFCIHNISYQGR--FAFEDYPELNLSERF-------- 213 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHH-HHHTTTTTS-------STTCEEEEEESCTTCCCE--EEGGGGGGGCCCGGG--------
T ss_pred CCCEEEEECcchHHHHHHHH-HHhhhhhhh-------hcccceeeeecCcccccc--cchhhhhhcCCchhh--------
Confidence 45678999999999987644 333211111 013469999999877664 3333322211 1100
Q ss_pred HHHHHHHhhCCCChhhhhcccccccCCCCCeeeeeehhhccCCchhhhHHHhHHHHHHhhhccch----hccCCCccccc
Q 009651 410 RFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYV----SLWPNKLQNKT 485 (530)
Q Consensus 410 ~f~~~~~~~~~~~~~~~~~lsii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lHseilk~~~f~df~----~l~P~kf~n~T 485 (530)
... .+.+..+..... .+ .++|-..++..|..|+.||.-+.+=+.+. +..-. ..-+.|+..|.
T Consensus 214 --~~~--------~~~~~~~~~~~~-~~--~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~ 279 (536)
T 3vue_A 214 --RSS--------FDFIDGYDTPVE-GR--KINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIV 279 (536)
T ss_dssp --HHH--------HEEEETTTSTTC-EE--EEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECC
T ss_pred --cch--------hhhhhccccccc-cc--chhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEE
Confidence 000 000001110000 01 78899999999999999998877643322 21100 12256899999
Q ss_pred cCCCccccc
Q 009651 486 NGITPRRWL 494 (530)
Q Consensus 486 NGVt~rrWl 494 (530)
|||....|-
T Consensus 280 NGiD~~~~~ 288 (536)
T 3vue_A 280 NGMDVSEWD 288 (536)
T ss_dssp CCCCTTTSC
T ss_pred CCcchhhcC
Confidence 999999995
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=58.66 E-value=2.8 Score=47.28 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=66.6
Q ss_pred CCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhceeeeecccccccc----ccCcHHHHHHHchHHHHHHHHH
Q 009651 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL----EKWSQAVMWKLLPRHMEIIEEI 407 (530)
Q Consensus 332 ~~~~ihlNDtHpalai~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpeal----E~wp~~l~~~lLpr~~~iI~eI 407 (530)
.++++|.||-|.+++.+.|= ... ..-.++||+|...--.. =.||.. .. |
T Consensus 181 ~pdIiH~HDW~tg~~~~~Lk-----~~~---------~~i~tVfTiH~telGR~lagqg~~~~y--~~-L---------- 233 (725)
T 3nb0_A 181 HAIVAHFHEWLAGVALPLCR-----KRR---------IDVVTIFTTHATLLGRYLCASGSFDFY--NC-L---------- 233 (725)
T ss_dssp EEEEEEEESGGGCTHHHHHH-----HTT---------CSCEEEEEESSCHHHHHHTSSSCSCHH--HH-G----------
T ss_pred CCcEEEeCchhhhHHHHHHH-----HhC---------CCCCEEEEEecchhhhhhhhcCCCchh--hh-h----------
Confidence 36899999999999987762 111 15579999999631110 011211 10 1
Q ss_pred HHHHHHHHHhhCCCChhhhhcccccccCCCCCeeeeeehhhccCCchhhhHHHhHHHHHHhhhccchhccCCCccccccC
Q 009651 408 DKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNG 487 (530)
Q Consensus 408 n~~f~~~~~~~~~~~~~~~~~lsii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lHseilk~~~f~df~~l~P~kf~n~TNG 487 (530)
..++.+.+.. ++.+. . .++|=..+++.+..|+.||.-..+=++. +...-|.++ |-||
T Consensus 234 ---------~~~~~d~ea~-~~~i~-~-----~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNG 290 (725)
T 3nb0_A 234 ---------ESVDVDHEAG-RFGIY-H-----RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNG 290 (725)
T ss_dssp ---------GGCCHHHHHH-HTTCH-H-----HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCC
T ss_pred ---------hhcCCChhhh-hhchh-H-----HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCC
Confidence 1111111111 11211 1 4677777888999999998877765553 223334445 9999
Q ss_pred CCccccc
Q 009651 488 ITPRRWL 494 (530)
Q Consensus 488 Vt~rrWl 494 (530)
|....|-
T Consensus 291 ID~~~f~ 297 (725)
T 3nb0_A 291 LNVIKFQ 297 (725)
T ss_dssp BCCCCCS
T ss_pred ccccccC
Confidence 9998885
No 7
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=37.37 E-value=58 Score=27.91 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=31.0
Q ss_pred CCeEEEeCCCc---hhhhHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 009651 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (530)
Q Consensus 332 ~~~~ihlNDtH---palai~ELmR~L~de~gl~wd~A~~iv~~~ 372 (530)
.++.||..-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMN----SEQTSFTSAFSLVKNA 121 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 57999999998 7777777775 5699999999998874
No 8
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=35.15 E-value=60 Score=28.75 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=31.6
Q ss_pred CCeEEEeCCCc---hhhhHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 009651 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (530)
Q Consensus 332 ~~~~ihlNDtH---palai~ELmR~L~de~gl~wd~A~~iv~~~ 372 (530)
.++.||..-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 56899999998 7888888875 5699999999999874
No 9
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=34.20 E-value=35 Score=36.16 Aligned_cols=55 Identities=16% Similarity=0.313 Sum_probs=35.0
Q ss_pred CCCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhceeeeeccccccccccCcHHHHHHHchHHHHHHH
Q 009651 330 FPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIE 405 (530)
Q Consensus 330 l~~~~~ihlNDtHpalai~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpealE~wp~~l~~~lLpr~~~iI~ 405 (530)
+.+..+||++|-|+ +.++.++|.+. ....+.||.|||.|.. + +-+.+|.+-+|+.
T Consensus 121 ~~~~DiV~vHdyhl-~~l~~~lr~~~-------------~~~~i~~~~H~pfp~~------~-~~~~lp~~~~il~ 175 (482)
T 1uqt_A 121 LQDDDIIWIHDYHL-LPFAHELRKRG-------------VNNRIGFFLHIPFPTP------E-IFNALPTYDTLLE 175 (482)
T ss_dssp CCTTCEEEEESGGG-TTHHHHHHHTT-------------CCSCEEEECCSCCCCH------H-HHTTSTTHHHHHH
T ss_pred cCCCCEEEEECchH-HHHHHHHHHhC-------------CCCcEEEEEcCCCCCH------H-HHhhCccHHHHHH
Confidence 34568999999997 45666777542 1456899999986532 2 2234565555544
No 10
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=33.16 E-value=80 Score=26.89 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCc---hhhhHHHHHHHHHHhcCCCHHHHHHHHhhce
Q 009651 331 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRTV 373 (530)
Q Consensus 331 ~~~~~ihlNDtH---palai~ELmR~L~de~gl~wd~A~~iv~~~~ 373 (530)
+.++.||..-|. +++++.-||+ ..|++.++|++.+++.-
T Consensus 81 ~~~VlVHC~~G~~RS~~~~~aylm~----~~~~~~~~A~~~v~~~R 122 (144)
T 3ezz_A 81 RGRVLVHSQAGISRSATICLAYLMM----KKRVRLEEAFEFVKQRR 122 (144)
T ss_dssp TCCEEEEESSSSSHHHHHHHHHHHH----HHTCCHHHHHHHHHTTC
T ss_pred CCeEEEECCCCCChhHHHHHHHHHH----HcCCCHHHHHHHHHHHC
Confidence 367999999997 6677666664 56999999999999753
No 11
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=29.87 E-value=2.3e+02 Score=30.47 Aligned_cols=133 Identities=14% Similarity=0.043 Sum_probs=74.9
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEEEehhhcc
Q 009651 17 KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQ 96 (530)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~~~~~w~~t~~~~~~~~~k~vyY~SmEfl~ 96 (530)
.||.-....++..+.. ..+.+.|...+|++.. ..+ ..-|.++.+.-.+++.+. ..|+|..+. +=..
T Consensus 310 GiP~i~~~~PiG~~~T-~~~l~~la~~~g~~~~----~~i-----~~er~r~~~~l~d~~~~l---~GKrvaI~g-d~~~ 375 (523)
T 3u7q_B 310 KHEVPKLNIPMGLDWT-DEFLMKVSEISGQPIP----ASL-----TKERGRLVDMMTDSHTWL---HGKRFALWG-DPDF 375 (523)
T ss_dssp CCCCCCCCCSCHHHHH-HHHHHHHHHHHCCCCC----HHH-----HHHHHHHHHHHHHHHHHH---TTCEEEEEC-SHHH
T ss_pred CCCeeecCCcCCHHHH-HHHHHHHHHHHCCChh----HHH-----HHHHHHHHHHHHHHHHhc---CCCEEEEEC-CchH
Confidence 5666543334444332 3355555566676642 111 112233333333344333 358888774 3222
Q ss_pred cchhHHHhhcCCcH--------------HHHHHHHHHc----------CCCHHHHHh----hhcccCCCCCCcccchhhh
Q 009651 97 GRTLTNAIGSLDIQ--------------NAYADALNNL----------GHVLEEIAE----QEKDAALGNGGLGRLASCF 148 (530)
Q Consensus 97 Gr~L~nnl~nlg~~--------------~~~~eaL~~l----------G~~~~~i~~----~E~D~~LgnGGLGrLAacf 148 (530)
-..|..-|..||+. +.+++.|+++ |-|+.++++ ..+|.-+|++-=-.+|-..
T Consensus 376 ~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLlig~s~~k~~a~~~ 455 (523)
T 3u7q_B 376 VMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYGKFIQRDT 455 (523)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEEEECTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEEEECccHHHHHHHh
Confidence 23444555567753 3456677652 447776664 5799999987555566666
Q ss_pred HhhhhccCCCeEEEE
Q 009651 149 LDSMATLNLPAWGYG 163 (530)
Q Consensus 149 LdS~AtL~lP~~G~G 163 (530)
+-++..+|+|++-+|
T Consensus 456 ~~~~~~~giP~irig 470 (523)
T 3u7q_B 456 LHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHCGGGCCCEEECS
T ss_pred hcccccCCCceEEec
Confidence 688899999998776
No 12
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=23.65 E-value=1.2e+02 Score=32.52 Aligned_cols=67 Identities=19% Similarity=0.371 Sum_probs=48.1
Q ss_pred CCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHHhhceeeeeccccccccccCcHHHHHHHchHH--HHHHH----
Q 009651 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRH--MEIIE---- 405 (530)
Q Consensus 332 ~~~~ihlNDtHpalai~ELmR~L~de~gl~wd~A~~iv~~~~~yTnHT~lpealE~wp~~l~~~lLpr~--~~iI~---- 405 (530)
+..+|-++|-|+.+ +|.++|.+.. +..+.|.-||| ||..-+-+.||.| -+|+.
T Consensus 149 ~~D~VwVhDYhL~l-lp~~lR~~~~-------------~~~igfFlHiP-------fPs~e~f~~Lp~~~r~ell~gll~ 207 (496)
T 3t5t_A 149 ADPVYLVHDYQLVG-VPALLREQRP-------------DAPILLFVHIP-------WPSADYWRILPKEIRTGILHGMLP 207 (496)
T ss_dssp SSCEEEEESGGGTT-HHHHHHHHCT-------------TSCEEEECCSC-------CCCHHHHTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEeCccHhH-HHHHHHhhCC-------------CCeEEEEEcCC-------CCCHHHHhhCcHhHHHHHHHHHHh
Confidence 45788999999754 5778887652 57899999999 4555555678865 56665
Q ss_pred ---------HHHHHHHHHHHhhC
Q 009651 406 ---------EIDKRFIAMVRSTR 419 (530)
Q Consensus 406 ---------eIn~~f~~~~~~~~ 419 (530)
+-=++|+..+...+
T Consensus 208 ~DligF~t~~y~~~Fl~~~~r~l 230 (496)
T 3t5t_A 208 ATTIGFFADRWCRNFLESVADLL 230 (496)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHC
T ss_pred CCEEEEecHHHHHHHHHHHHHHh
Confidence 44467887777766
No 13
>2k84_A P9; HOST-virus interaction, metal-binding, virion, zinc, zinc-finger; NMR {Synthetic}
Probab=22.45 E-value=25 Score=23.59 Aligned_cols=14 Identities=36% Similarity=0.740 Sum_probs=11.1
Q ss_pred ecCCCCchhhhhhhhhhhhhh
Q 009651 286 LYPGDSTEEGKLLRLKQQFFL 306 (530)
Q Consensus 286 LYp~Ds~~~Gk~lRLkQeyfl 306 (530)
|||+=| .+||||=+
T Consensus 1 LYPDLs-------~~kqEY~v 14 (30)
T 2k84_A 1 LYPDLS-------EIKKEYNV 14 (30)
T ss_dssp CCCCSC-------SSSHHHHH
T ss_pred CCccHH-------HHHHHHhH
Confidence 799887 78999843
No 14
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=21.00 E-value=1.7e+02 Score=26.74 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=30.6
Q ss_pred CCCeEEEeCCCc---hhhhHHHHHHHHHHhcCCCHHHHHHHHhhc
Q 009651 331 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (530)
Q Consensus 331 ~~~~~ihlNDtH---palai~ELmR~L~de~gl~wd~A~~iv~~~ 372 (530)
+.++.||..-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 117 g~~VLVHC~~G~sRS~tvv~ayLm~----~~~~s~~~A~~~v~~~ 157 (182)
T 2j16_A 117 REKILIHAQCGLSRSATLIIAYIMK----YHNLSLRHSYDLLKSR 157 (182)
T ss_dssp TCCEEEEESSCCSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCCChHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 367999999996 5677777764 4799999999999873
Done!