Query 009660
Match_columns 529
No_of_seqs 322 out of 1239
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 10:11:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009660.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009660hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b4r_A Putative zinc metallopr 99.9 2.1E-24 7.2E-29 210.4 14.4 120 287-448 42-161 (224)
2 2di4_A Zinc protease, cell div 63.8 4.3 0.00015 39.8 3.3 28 295-322 18-47 (238)
3 3cqb_A Probable protease HTPX 53.0 6 0.00021 33.6 2.0 12 294-305 84-95 (107)
4 2jsd_A Matrix metalloproteinas 48.8 7.9 0.00027 34.6 2.2 22 294-315 109-130 (160)
5 2xs4_A Karilysin protease; hyd 47.9 8.2 0.00028 34.9 2.2 22 294-315 116-137 (167)
6 2ovx_A Matrix metalloproteinas 46.1 7.6 0.00026 35.1 1.7 22 294-315 112-133 (159)
7 1hy7_A Stromelysin-1, MMP-3; m 45.0 9.6 0.00033 34.8 2.2 22 294-315 114-135 (173)
8 1cge_A Fibroblast collagenase; 41.8 9.7 0.00033 34.6 1.7 22 294-315 112-133 (168)
9 1hv5_A Stromelysin 3; inhibiti 37.4 13 0.00043 33.7 1.7 22 294-315 114-135 (165)
10 1i76_A MMP-8;, neutrophil coll 36.9 15 0.00053 33.2 2.2 22 294-315 113-134 (163)
11 1slm_A Stromelysin-1; hydrolas 33.1 16 0.00053 35.9 1.7 21 294-314 196-216 (255)
12 3m92_A Protein YCIN; DUF2498, 32.3 52 0.0018 28.5 4.6 66 149-215 25-103 (107)
13 2y6d_A Matrilysin; hydrolase; 30.7 22 0.00076 32.6 2.2 22 294-315 116-137 (174)
14 1y93_A Macrophage metalloelast 30.6 19 0.00065 32.5 1.7 19 294-312 109-127 (159)
15 3c37_A Peptidase, M48 family; 30.3 21 0.00071 34.5 2.0 12 294-305 101-112 (253)
16 2w15_A Zinc metalloproteinase 30.3 19 0.00065 33.4 1.7 17 293-309 136-152 (202)
17 1rm8_A MMP-16, matrix metallop 30.1 23 0.00079 32.0 2.2 22 294-315 118-139 (169)
18 3ayu_A 72 kDa type IV collagen 30.1 19 0.00067 32.7 1.7 21 294-314 115-135 (167)
19 1c7k_A NCNP, zinc endoprotease 29.1 25 0.00086 31.6 2.2 11 295-305 79-89 (132)
20 2cki_A Ulilysin; metalloprotea 27.4 18 0.00061 35.7 1.0 11 295-305 164-174 (262)
21 1atl_A Atrolysin C; metalloend 26.7 25 0.00086 32.6 1.9 17 293-309 136-152 (202)
22 1bud_A Protein (acutolysin A); 26.6 24 0.00083 32.5 1.7 18 293-310 133-150 (197)
23 2ddf_A ADAM 17; hydrolase; HET 26.0 26 0.00089 33.5 1.9 18 293-310 182-199 (257)
24 1qua_A Acutolysin-C, hemorrhag 25.9 25 0.00086 32.4 1.7 17 293-309 135-151 (197)
25 1kuf_A Atrolysin E, metallopro 25.6 26 0.00088 32.6 1.7 17 293-309 138-154 (203)
26 1yp1_A FII; FII hydrolase; 1.9 25.4 26 0.00089 32.5 1.7 17 293-309 135-151 (202)
27 3b8z_A Protein adamts-5; alpha 25.0 27 0.00091 32.7 1.7 16 294-309 142-157 (217)
28 830c_A MMP-13, MMP-13; matrix 24.0 29 0.00099 31.8 1.7 22 294-315 114-135 (168)
29 2v4b_A Adamts-1; zymogen, prot 23.6 29 0.00099 34.1 1.7 18 293-310 143-160 (300)
30 2rjp_A Adamts-4; metalloprotea 22.5 31 0.0011 34.2 1.7 17 293-309 143-159 (316)
31 3ma2_D Matrix metalloproteinas 22.3 33 0.0011 31.9 1.7 21 295-315 124-144 (181)
32 2rjq_A Adamts-5; metalloprotea 21.9 32 0.0011 35.0 1.7 17 293-309 143-159 (378)
33 4dd8_A Disintegrin and metallo 21.7 40 0.0014 31.4 2.2 16 294-309 134-149 (208)
34 2ero_A VAP-1, vascular apoptos 21.3 39 0.0013 35.3 2.2 20 292-311 145-164 (427)
35 1sat_A Serratia protease; para 20.7 38 0.0013 35.9 2.0 21 294-314 171-191 (471)
36 2isb_A Fumarase, FUM-1; NP_069 20.2 78 0.0027 30.3 3.8 60 151-233 20-79 (192)
No 1
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=99.91 E-value=2.1e-24 Score=210.41 Aligned_cols=120 Identities=30% Similarity=0.440 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccCCccccccceeeccceEEeeccccCCccceeeeeecchhhHHHHHHHHHHhh
Q 009660 287 PGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQIGSFGAITRIRNIVSKREDLLKVAAAGPLAGFSLGFVLFLVG 366 (529)
Q Consensus 287 p~aL~Ll~iL~vHElGH~laAr~~Gvk~s~P~FIP~i~LgtFGAvir~~s~~~~RkalfdIAlAGPLAg~llAl~ll~iG 366 (529)
.++++++.++++||+||+++||++|+++.. +.+.+||+++++++. +|+++++|++|||++|++++++++.+.
T Consensus 42 ~~~l~l~~~v~~HElgH~~~A~~~G~~~~~------i~l~p~Gg~~~~~~~--~~~~~~~ValAGPl~nl~la~~~~~~~ 113 (224)
T 3b4r_A 42 VLFILLFVSVVLHELGHSYVAKKYGVKIEK------ILLLPIGGVAMMDKI--PKEGELRIGIAGPLVSFIIGIVLLIVS 113 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC------EEECSSSCBCCCCCC--CSSSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccc------EEEEEeeeEEEcccC--CccceeeeeeeHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999999985 444558999988763 458899999999999999998887664
Q ss_pred hccCCCCCccccccccchhhhhhhhhHHHHhhccccCCCCCccchHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhhh
Q 009660 367 FIFPPSDGIGIVVDASVFHESFLAGGFAKLLLGDVLKDGTPISVNPLVIWAWAGLLINAINSIPAGELDGGRIAFALWGR 446 (529)
Q Consensus 367 l~l~~s~~~~~~v~~~~f~~s~Llg~la~l~LG~~l~~~~~v~lhPL~~agwinLvltafNLLPigPLDGGrIl~Allgr 446 (529)
...+... .. ...+.+++|+|+++++|||+|++|||||||+++++++
T Consensus 114 ~~~~~~~---------------------------------~~-~~~~~~~~~iNl~l~~fNLlPi~PLDGgril~~ll~~ 159 (224)
T 3b4r_A 114 QFFDINI---------------------------------NG-YPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSK 159 (224)
T ss_dssp TTCCCEE---------------------------------TT-EEHHHHHHHHHHHHHHHTTSSSSSSHHHHHHHHHHHH
T ss_pred HHccCcc---------------------------------hH-HHHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHhcc
Confidence 3221100 00 1224467999999999999999999999999999887
Q ss_pred hH
Q 009660 447 KA 448 (529)
Q Consensus 447 r~ 448 (529)
+.
T Consensus 160 ~~ 161 (224)
T 3b4r_A 160 KY 161 (224)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 2
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=63.83 E-value=4.3 Score=39.82 Aligned_cols=28 Identities=25% Similarity=0.387 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHcC--CccCCcccccc
Q 009660 295 VIGVHELGHILAAKSTG--VELGVPYFVPS 322 (529)
Q Consensus 295 iL~vHElGH~laAr~~G--vk~s~P~FIP~ 322 (529)
++..||.||+++|...+ .++..-..+|.
T Consensus 18 ~vAyHEAGHAlva~~l~~~~pV~KVTIiPR 47 (238)
T 2di4_A 18 KIAIHEAGHALMGLVSDDDDKVHKISIIPR 47 (238)
T ss_dssp HHHHHHHHHHHHHHHCSSCCCCCCEECC--
T ss_pred HHHHHHHHHHHHHHHcCCCCceeEEEEeec
Confidence 46789999999999987 56655556664
No 3
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.96 E-value=6 Score=33.60 Aligned_cols=12 Identities=33% Similarity=0.465 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHH
Q 009660 294 LVIGVHELGHIL 305 (529)
Q Consensus 294 ~iL~vHElGH~l 305 (529)
..++.||+||+.
T Consensus 84 ~aVlaHElgH~~ 95 (107)
T 3cqb_A 84 EAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 468899999974
No 4
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=48.78 E-value=7.9 Score=34.60 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+++||+||++=-..-..+.+
T Consensus 109 ~~v~~HEiGHaLGL~H~~~~~s 130 (160)
T 2jsd_A 109 FTVAAHEFGHALGLAHSTDPSA 130 (160)
T ss_dssp HHHHHHHHHHHHTCCCCCCTTC
T ss_pred HHHHHHHhHhhhcCCCCCCCCc
Confidence 4678999999987765555444
No 5
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=47.93 E-value=8.2 Score=34.92 Aligned_cols=22 Identities=27% Similarity=0.650 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+++||+||++=-..-..+.+
T Consensus 116 ~~v~~HEiGHaLGL~H~~~~~s 137 (167)
T 2xs4_A 116 ITVAAHEIGHLLGIEHSNVSSA 137 (167)
T ss_dssp HHHHHHHHHHHHTBCCCSCTTS
T ss_pred hhhHHHHHHHhhcCCCCCCCCc
Confidence 4678999999987655554443
No 6
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=46.07 E-value=7.6 Score=35.08 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+.+||+||++=-..-..+.+
T Consensus 112 ~~va~HEiGHaLGL~Hs~~~~~ 133 (159)
T 2ovx_A 112 FLVAAHQFGHALGLDHSSVPEA 133 (159)
T ss_dssp HHHHHHHHHHHTTCCCCSCTTS
T ss_pred hhhhhhhhhhhhcCCCCCCCcc
Confidence 3678999999986655444443
No 7
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=45.01 E-value=9.6 Score=34.77 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+++||+||++=-..-..+-+
T Consensus 114 ~~v~~HEiGHaLGL~H~~~~~s 135 (173)
T 1hy7_A 114 FLVAAHEIGHSLGLFHSANTEA 135 (173)
T ss_dssp HHHHHHHHHHHHTBCCCSCTTS
T ss_pred hhhHHHHHHHhhcCCCCCCCCc
Confidence 4678999999987655554443
No 8
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=41.79 E-value=9.7 Score=34.64 Aligned_cols=22 Identities=27% Similarity=0.279 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+++||+||++=-..-..+.+
T Consensus 112 ~~v~~HEiGHaLGL~H~~~~~s 133 (168)
T 1cge_A 112 HRVAAHELGHSLGLSHSTDIGA 133 (168)
T ss_dssp HHHHHHHHHHHTTCCCCSCTTS
T ss_pred hhhhhhHhHhhhcCCCCCCCCc
Confidence 4678999999986655444443
No 9
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=37.39 E-value=13 Score=33.73 Aligned_cols=22 Identities=32% Similarity=0.576 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+.+||+||++--..-..+.+
T Consensus 114 ~~v~~HEiGHaLGL~H~~~~~s 135 (165)
T 1hv5_A 114 LQVAAHEFGHVLGLQHTTAAKA 135 (165)
T ss_dssp HHHHHHHHHHHTTCCCCSCTTS
T ss_pred hhhHHHHhHhhhCCCCCCCCCc
Confidence 4678999999986655444443
No 10
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=36.86 E-value=15 Score=33.17 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+.+||+||.+--.....+.+
T Consensus 113 ~~v~~HE~GHalGl~H~~~~~~ 134 (163)
T 1i76_A 113 FLVAAHEFGHSLGLAHSSDPGA 134 (163)
T ss_dssp HHHHHHHHHHHHTBCCCSCTTS
T ss_pred hhhhHHHhhhhhcCCCCCCCCc
Confidence 4578999999987655544443
No 11
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=33.14 E-value=16 Score=35.89 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 009660 294 LVIGVHELGHILAAKSTGVEL 314 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~ 314 (529)
..+++||+||++=-..-..+-
T Consensus 196 ~~va~HEiGHaLGL~Hs~~~~ 216 (255)
T 1slm_A 196 FLVAAHEIGHSLGLFHSANTE 216 (255)
T ss_dssp HHHHHHHHHHHTTCCCCSCTT
T ss_pred hhhhHHHHHHHhcCCCCCCCC
Confidence 467899999998664444433
No 12
>3m92_A Protein YCIN; DUF2498, structural genomics, PSI-2, protein structure initi midwest center for structural genomics, MCSG, unknown funct; HET: MSE; 2.05A {Shigella flexneri 2A}
Probab=32.25 E-value=52 Score=28.48 Aligned_cols=66 Identities=17% Similarity=0.333 Sum_probs=44.6
Q ss_pred cccCCCCHhHH-----HHhhccccccceeeeccccccCceEEEEeccC-------Cc-hHHHHHHHHHHHHhHhCCceEE
Q 009660 149 DEYIRIPKETI-----DILKDQVFGFDTFFVTNQEPYEGGVLFKGNLR-------GQ-AAKTYEKISTRMKNKFGDQYKL 215 (529)
Q Consensus 149 ~~~~~i~~edl-----~~ik~~~Fg~dtF~~t~~~~~~~gvi~rGnLR-------~~-~e~~y~~l~~~l~~~fGd~y~l 215 (529)
.+.-+|++++| +.||+.===+.--.+|++|-..+..+|||+.= +. .-.||. +-+-|.-.+..+|.|
T Consensus 25 ~~~~~I~r~~LL~~AN~iI~eHeDyi~GM~A~~Veqk~~VLVFkGeyFLDe~GLPT~KTTAVFN-MFK~LAh~LS~ky~L 103 (107)
T 3m92_A 25 KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-MFKHLAHVLSEKYHL 103 (107)
T ss_dssp CCCEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCEEEEECCCCCTTSCCCHHHHHHHH-HHHHHHHHHTTTEEE
T ss_pred CCCCccCHHHHHHHHHHHHHHhHHHhccccccceeeeCCEEEEecceeecCCCCCCcccHHHHH-HHHHHHHHhChheec
Confidence 45678999998 46665322233467999999999999999932 22 233443 445566677788977
No 13
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=30.75 E-value=22 Score=32.57 Aligned_cols=22 Identities=32% Similarity=0.388 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+.+||+||.+--.....+.+
T Consensus 116 ~~~~~HE~gH~lGl~h~~~~~s 137 (174)
T 2y6d_A 116 LYAATHELGHSLGMGHSSDPNA 137 (174)
T ss_dssp HHHHHHHHHHHHTBCCCSCTTS
T ss_pred eehhhHHhHhhhcCCCCCCCCc
Confidence 3578999999987655544444
No 14
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=30.58 E-value=19 Score=32.50 Aligned_cols=19 Identities=32% Similarity=0.550 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 009660 294 LVIGVHELGHILAAKSTGV 312 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gv 312 (529)
..+.+||+||.+--.....
T Consensus 109 ~~~~~HE~GH~lGl~H~~~ 127 (159)
T 1y93_A 109 FLTAVHEIGHSLGLGHSSD 127 (159)
T ss_dssp HHHHHHHHHHHTTCCCCSC
T ss_pred hhhhhhhhhhhhcCCCCCC
Confidence 3568999999976544433
No 15
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=30.35 E-value=21 Score=34.52 Aligned_cols=12 Identities=25% Similarity=0.393 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHH
Q 009660 294 LVIGVHELGHIL 305 (529)
Q Consensus 294 ~iL~vHElGH~l 305 (529)
.+++.||+||+.
T Consensus 101 aaVLaHElgH~~ 112 (253)
T 3c37_A 101 AGVLAHEINHAV 112 (253)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 468899999984
No 16
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=30.27 E-value=19 Score=33.37 Aligned_cols=17 Identities=41% Similarity=0.507 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009660 293 ALVIGVHELGHILAAKS 309 (529)
Q Consensus 293 l~iL~vHElGH~laAr~ 309 (529)
++..++||+||-+=+..
T Consensus 136 ~a~~~AHElGH~lG~~H 152 (202)
T 2w15_A 136 VAVTMAHELGHNLGIHH 152 (202)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhhhcCCcc
Confidence 45788999999876554
No 17
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=30.11 E-value=23 Score=32.01 Aligned_cols=22 Identities=32% Similarity=0.579 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+.+||+||.+--.....+.+
T Consensus 118 ~~~~~he~gh~lgl~h~~~~~~ 139 (169)
T 1rm8_A 118 FLVAVHELGHALGLEHSNDPTA 139 (169)
T ss_dssp HHHHHHHHHHHHTCCCCSCTTS
T ss_pred eeehhhhhhhhcCCCCCCCCCC
Confidence 3578999999987655544443
No 18
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=30.06 E-value=19 Score=32.73 Aligned_cols=21 Identities=14% Similarity=0.368 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 009660 294 LVIGVHELGHILAAKSTGVEL 314 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~ 314 (529)
..+.+||+||.+--.....+.
T Consensus 115 ~~~~~HE~gH~lGl~H~~~~~ 135 (167)
T 3ayu_A 115 FLVAAHAFGHAMGLEHSQDPG 135 (167)
T ss_dssp HHHHHHHHHHHTTEECCSCTT
T ss_pred eeehhhhhHHhccCCCCCCCC
Confidence 357899999998655444433
No 19
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=29.10 E-value=25 Score=31.58 Aligned_cols=11 Identities=45% Similarity=0.851 Sum_probs=9.5
Q ss_pred HHHHHHHHHHH
Q 009660 295 VIGVHELGHIL 305 (529)
Q Consensus 295 iL~vHElGH~l 305 (529)
.+.+||+||.+
T Consensus 79 ~v~aHE~GH~L 89 (132)
T 1c7k_A 79 RVTAHETGHVL 89 (132)
T ss_dssp HHHHHHHHHHH
T ss_pred eEEeeeehhcc
Confidence 47899999986
No 20
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=27.36 E-value=18 Score=35.75 Aligned_cols=11 Identities=45% Similarity=0.761 Sum_probs=9.5
Q ss_pred HHHHHHHHHHH
Q 009660 295 VIGVHELGHIL 305 (529)
Q Consensus 295 iL~vHElGH~l 305 (529)
-.++||+||++
T Consensus 164 ~TltHEvGH~L 174 (262)
T 2cki_A 164 RTATHEIGHWL 174 (262)
T ss_dssp HHHHHHHHHHT
T ss_pred chhhhhhhhhh
Confidence 57899999986
No 21
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=26.74 E-value=25 Score=32.57 Aligned_cols=17 Identities=41% Similarity=0.442 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009660 293 ALVIGVHELGHILAAKS 309 (529)
Q Consensus 293 l~iL~vHElGH~laAr~ 309 (529)
.+..++||+||-+=+..
T Consensus 136 ~a~~~AHElGHnlG~~H 152 (202)
T 1atl_A 136 MGVTMAHELGHNLGMEH 152 (202)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred eEEEehhhhccccCcee
Confidence 35688999999876554
No 22
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=26.58 E-value=24 Score=32.51 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 009660 293 ALVIGVHELGHILAAKST 310 (529)
Q Consensus 293 l~iL~vHElGH~laAr~~ 310 (529)
++..++||+||-+=+..-
T Consensus 133 ~a~~~AHElGH~lG~~HD 150 (197)
T 1bud_A 133 VAITLAHEMAHNLGVSHD 150 (197)
T ss_dssp HHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhhhcCCccC
Confidence 356789999999766543
No 23
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=25.96 E-value=26 Score=33.54 Aligned_cols=18 Identities=39% Similarity=0.584 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 009660 293 ALVIGVHELGHILAAKST 310 (529)
Q Consensus 293 l~iL~vHElGH~laAr~~ 310 (529)
.+.+++||+||-+=+..=
T Consensus 182 ~a~~~AHElGHnlG~~HD 199 (257)
T 2ddf_A 182 ADLVTTHELGHNFGAEHD 199 (257)
T ss_dssp HHHHHHHHHHHHTTCCCC
T ss_pred eeeeeeeehhhhcCcccC
Confidence 457889999998765543
No 24
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=25.93 E-value=25 Score=32.38 Aligned_cols=17 Identities=41% Similarity=0.497 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009660 293 ALVIGVHELGHILAAKS 309 (529)
Q Consensus 293 l~iL~vHElGH~laAr~ 309 (529)
.+..++||+||-+=+..
T Consensus 135 ~a~~~AHElGH~lG~~H 151 (197)
T 1qua_A 135 MAVTMAHELGHNLGMNH 151 (197)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 45678999999865543
No 25
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=25.57 E-value=26 Score=32.60 Aligned_cols=17 Identities=41% Similarity=0.518 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009660 293 ALVIGVHELGHILAAKS 309 (529)
Q Consensus 293 l~iL~vHElGH~laAr~ 309 (529)
.+..++||+||-+=+..
T Consensus 138 ~a~~~AHElGH~lG~~H 154 (203)
T 1kuf_A 138 VAVTMTHELGHNLGMEH 154 (203)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hHHHHHHHhhhhcCCCC
Confidence 45788999999876554
No 26
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=25.44 E-value=26 Score=32.48 Aligned_cols=17 Identities=41% Similarity=0.513 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009660 293 ALVIGVHELGHILAAKS 309 (529)
Q Consensus 293 l~iL~vHElGH~laAr~ 309 (529)
++..++||+||-+=+..
T Consensus 135 ~a~~~AHElGH~lG~~H 151 (202)
T 1yp1_A 135 MAVVMAHELGHNLGMLH 151 (202)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 35678999999876554
No 27
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=25.01 E-value=27 Score=32.66 Aligned_cols=16 Identities=31% Similarity=0.544 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 009660 294 LVIGVHELGHILAAKS 309 (529)
Q Consensus 294 ~iL~vHElGH~laAr~ 309 (529)
+..++||+||-+=+..
T Consensus 142 a~~~AHElGHnlG~~H 157 (217)
T 3b8z_A 142 AFTVAHEIGHLLGLSH 157 (217)
T ss_dssp HHHHHHHHHHHTTCCC
T ss_pred hhhhHhhhhhhcCCcC
Confidence 4678999999876554
No 28
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=24.05 E-value=29 Score=31.84 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccC
Q 009660 294 LVIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~s 315 (529)
..+.+||+||.+--..-..+-+
T Consensus 114 ~~v~~hE~Gh~lGl~h~~~~~a 135 (168)
T 830c_A 114 FLVAAHEFGHSLGLDHSKDPGA 135 (168)
T ss_dssp HHHHHHHHHHHTTBCCCSCTTS
T ss_pred hhhhhhhhcchhcCCCCCCCcc
Confidence 4578999999987555444444
No 29
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=23.55 E-value=29 Score=34.14 Aligned_cols=18 Identities=33% Similarity=0.541 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 009660 293 ALVIGVHELGHILAAKST 310 (529)
Q Consensus 293 l~iL~vHElGH~laAr~~ 310 (529)
.+.+++||+||-+=+.+-
T Consensus 143 ~a~t~AHElGHnlG~~HD 160 (300)
T 2v4b_A 143 AAFTTAHELGHVFNMPHD 160 (300)
T ss_dssp HHHHHHHHHHHHTTCCCT
T ss_pred ceehhhhhhhhhcCCcCC
Confidence 457899999998766543
No 30
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=22.47 E-value=31 Score=34.22 Aligned_cols=17 Identities=24% Similarity=0.513 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009660 293 ALVIGVHELGHILAAKS 309 (529)
Q Consensus 293 l~iL~vHElGH~laAr~ 309 (529)
.+.+++||+||-+=+.+
T Consensus 143 ~a~t~AHElGHnlGm~H 159 (316)
T 2rjp_A 143 SAFTAAHQLGHVFNMLH 159 (316)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhhcCccC
Confidence 45789999999876554
No 31
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=22.29 E-value=33 Score=31.95 Aligned_cols=21 Identities=33% Similarity=0.563 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHcCCccC
Q 009660 295 VIGVHELGHILAAKSTGVELG 315 (529)
Q Consensus 295 iL~vHElGH~laAr~~Gvk~s 315 (529)
.+.+||+||.+--.....+-+
T Consensus 124 ~v~~hE~Gh~lGl~hs~~~~a 144 (181)
T 3ma2_D 124 LVAVHELGHALGLEHSSDPSA 144 (181)
T ss_dssp HHHHHHHHHHTTCCCCSCTTS
T ss_pred eeehhhccccccCCcCCCCcc
Confidence 578999999965544444333
No 32
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=21.91 E-value=32 Score=34.96 Aligned_cols=17 Identities=35% Similarity=0.560 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009660 293 ALVIGVHELGHILAAKS 309 (529)
Q Consensus 293 l~iL~vHElGH~laAr~ 309 (529)
++.+++||+||-+=+.+
T Consensus 143 ~a~~~AHElGHnlGm~H 159 (378)
T 2rjq_A 143 AAFTVAHEIGHLLGLSH 159 (378)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhhhhhhhhhhhcCccC
Confidence 45789999999986654
No 33
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=21.67 E-value=40 Score=31.37 Aligned_cols=16 Identities=31% Similarity=0.441 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 009660 294 LVIGVHELGHILAAKS 309 (529)
Q Consensus 294 ~iL~vHElGH~laAr~ 309 (529)
+..++||+||-+-+..
T Consensus 134 a~~~AHElGH~lG~~H 149 (208)
T 4dd8_A 134 ACTMAHEMGHNLGMDH 149 (208)
T ss_dssp HHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHcCCcC
Confidence 4679999999875544
No 34
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=21.28 E-value=39 Score=35.30 Aligned_cols=20 Identities=25% Similarity=0.363 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 009660 292 TALVIGVHELGHILAAKSTG 311 (529)
Q Consensus 292 Ll~iL~vHElGH~laAr~~G 311 (529)
.++.+++||+||-+=+.+-+
T Consensus 145 ~~a~t~AHElGHnlG~~HD~ 164 (427)
T 2ero_A 145 LVAIAMAHEMGHNLGMDHDK 164 (427)
T ss_dssp HHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHhcCCccCC
Confidence 34578999999988766544
No 35
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=20.72 E-value=38 Score=35.94 Aligned_cols=21 Identities=29% Similarity=0.256 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcc
Q 009660 294 LVIGVHELGHILAAKSTGVEL 314 (529)
Q Consensus 294 ~iL~vHElGH~laAr~~Gvk~ 314 (529)
..+.+||+||++=-.+-+.+-
T Consensus 171 ~~va~HEiGHaLGL~Hs~~~~ 191 (471)
T 1sat_A 171 RQTFTHEIGHALGLSHPGDYN 191 (471)
T ss_dssp HHHHHHHHHHHHTCCCSSCCC
T ss_pred ceeeeeeccccccCCCCCCcc
Confidence 356899999999776665554
No 36
>2isb_A Fumarase, FUM-1; NP_069927.1, fumarase of FUM-1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; HET: MSE; 1.66A {Archaeoglobus fulgidus} SCOP: c.8.9.1
Probab=20.18 E-value=78 Score=30.25 Aligned_cols=60 Identities=18% Similarity=0.109 Sum_probs=45.1
Q ss_pred cCCCCHhHHHHhhccccccceeeeccccccCceEEEEeccCCchHHHHHHHHHHHHhHhCCceEEEEEecCCCCCCEEEE
Q 009660 151 YIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVV 230 (529)
Q Consensus 151 ~~~i~~edl~~ik~~~Fg~dtF~~t~~~~~~~gvi~rGnLR~~~e~~y~~l~~~l~~~fGd~y~lfl~~~~~~~kPv~~v 230 (529)
..|+++||+++||- ++-|...|.+-.-++.+|+|+.+.|++ |.+. .-...++++++.
T Consensus 20 ~~Plt~e~v~~L~v----------------GD~V~LsG~i~taRDaAHkRl~e~l~~--Ge~l-----P~dl~g~~Iyy~ 76 (192)
T 2isb_A 20 RTPLVKDQILKLKV----------------GDVVYITGEIFTARDEAHARALEWMEE--GKEL-----PFSFDKGVVYHC 76 (192)
T ss_dssp ESSCCHHHHHHCCT----------------TCEEEEEEEEEECCHHHHHHHHHHHHH--TCCC-----SSCCTTCEEECB
T ss_pred CCCCCHHHHhhCCC----------------CCEEEEEEEEEEEhHHHHHHHHHHHHc--CCCC-----CcCCCCCEEEEe
Confidence 45888999999984 677888888889999999999999988 5442 112246777766
Q ss_pred EcC
Q 009660 231 VPR 233 (529)
Q Consensus 231 ~P~ 233 (529)
=|.
T Consensus 77 GP~ 79 (192)
T 2isb_A 77 GPL 79 (192)
T ss_dssp CCE
T ss_pred cCC
Confidence 555
Done!